Publications list

Found 1765 results

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2014

Man JG, Yu JS, White PJ, Gu SB, Zhang YL, Guo QF, Shi Y, Wang D. 2014. Effects of supplemental irrigation with micro-sprinkling hoses on water distribution in soil and grain yield of winter wheat. Field Crops Research. 161:26-37.

Raven JA, Beardall J, Giordano M. 2014. Energy costs of carbon dioxide concentrating mechanisms in aquatic organisms. Photosynthesis Research. 121:111-124.

Gordon IJ, Evans DM, Garner TWJ, Katzner T, Gompper ME, Altwegg R, Branch TA, Johnson JA, Pettorelli N. 2014. Enhancing communication between conservation biologists and conservation practitioners: Letter from the Conservation Front Line. Animal Conservation. 17:1-2.

Searle KR, Barber J, Stubbins F, Labuschagne K, Carpenter S, Butler A, Denison E, Sanders C, Mellor PS, Wilson A et al.. 2014. Environmental drivers of Culicoides phenology: how important is species-specific variation when determining disease policy? PLoS One. 9:e111876.

Danies G, Myers K, Mideros MF, Restrepo S, Martin FN, Cooke DEL, Smart CD, Ristaino JB, Seaman AJ, Gugino BK et al.. 2014. An ephemeral sexual population of Phytophthora infestans in the Northeastern United States and Canada. PLoS ONE. 9:e116354.

Amar D, Frades I, Danek A, Goldberg T, Sharma SK, Hedley P, Proux-Wera E, Andreasson E, Shamir R, Tzfadia O et al.. 2014. Evaluation and integration of functional annotation pipelines for newly sequenced organisms: the potato genome as a test case. BMC Plant Biology. 14:329.

Perez-Barberia FJ, Duff EI, Brewer MJ, Guinness FE. 2014. Evaluation of methods to age Scottish red deer: the balance between accuracy and practicality. Journal of Zoology. 294:180-189.

Frank ASK, Johnson CN, Potts JM, Fisher A, Lawes MJ, Woinarski JCZ, Tuft K, Radford IJ, Gordon IJ, Collis MA et al.. 2014. Experimental evidence that feral cats cause local extirpation of small mammals in Australia's tropical savannas. Journal of Applied Ecology. 51:1486-1493.

Bagousse-Pinguet LY, Xiao S, Brooker RW, Gross N, Liancourt P, Straile D, Michalet R. 2014. Facilitation displaces hotspots of diversity and allows communities to persist in heavily stressed and disturbed environments. Journal of Vegetation Science.. 25:66-76.

Cavieres LA, Brooker RW, Butterfield BJ, Cook BJ, Kikvidze Z, Lortie CJ, Michalet R, Pugnaire FI, Schoeb C, Xiao S et al.. 2014. Facilitative plant interactions and climate simultaneously drive alpine plant diversity. Ecology Letters. 17:193-202.

Naik L, Gebreegziabher Z, Tumwesige V, Balana BB, Mwirigi J, Austin G. 2014. Factors determining the stability and productivity of small scale anaerobic digesters. Biomass and Bioenergy. 70:51-57.

George TS, Hawes C, Newton AC, McKenzie BM, Hallett PD, Valentine TA. 2014. Field phenotyping and long-term platforms to characterise how crop genotypes interact with soil processes and the environment. Agronomy. 4:242-278.

Wishart J, George TS, Brown LK, White PJ, Ramsay G, Jones HG, Gregory PJ. 2014. Field phenotyping of potato to assess root and shoot characteristics associated with drought tolerance. Plant and Soil. 378:351-363.

Anderson IC, Genney DR, Alexander IJ. 2014. Fine-scale diversity and distribution of ectomycorrhizal fungal mycelium in a Scots pine forest. New Phytologist. 201:1423-1430.

Gilhespy S, Anthony S, Cardenas L, Chadwick D, del Prado A, Li C, Middelbrook T, Rees RM, Salas W, Sanz-Cobena A et al.. 2014. First 20 years of DNDC: model evolution. Ecological Modelling. 292:51-62.

Rossez Y, Holmes A, Wolfson WB, Gally DL, Mahjan A, Pedersen HL, Willats WGT, Toth IK, Holden N. 2014. Flagella interact with ionic plant lipids to mediate adherence of pathogenic Escherichia coli to fresh produce plants. Environmental Microbiology. 16:2181-2195.

Glenk K, Schaafsma M, Moxey A, Martin-Ortega J, Hanley N. 2014. A framework for valuing spatially targeted peatland restoration. Ecosystem Services. 9:20-33.

Novo P, Garrido A. 2014. From policy design to implementation: an institutional analysis of the new Nicaraguan Water Law. Water Policy. 16:1009-1030.

Zheng X, McLellan H, Fraiture M, Liu X, Boevink PC, Gilroy EM, Chen Y, Kandel K, Sessa G, Birch PRJ et al.. 2014. Functionally redundant RXLR effectors from Phytophthora infestans act at different steps to suppress early flg22-triggered immunity. PLoS Pathogens. 10:e1004057.

Rhee YJ, Hillier S, Pendlowski H, Gadd GM. 2014. Fungal transformation of metallic lead to pyromorphite in liquid medium. Chemosphere. 113:17-21.

Graham J, Hackett CA, Smith K, Karley A, Mitchell C, Roberts H, O'Neill T. 2014. Genetic and environmental regulation of plant architectural traits and opportunities for pest and disease control in raspberry. Annals of Applied Biology. 165:318-328.

Gosney BJ, Oreilly-Wapstra JM, Forster LG, Barbour RC, Iason GR, Potts BM. 2014. Genetic and ontogenetic variation in an endangered tree structures dependent arthropod and fungal communities. PLoS ONE. 9:e114132.

Looseley ME, Keith R, Guy D, Barral-Baron G, Thirugnanasambandam A, Harrap D, Werner P, Newton AC. 2014. Genetic mapping of resistance to Rhynchosporium commune and characterisation of early infection in a winter barley mapping population. Euphytica. Published online.

Graham NS, Hammond JP, Lysenko A, Mayes S, O'Lochlainn S, Blasco B, Bowen HC, Rawlings CJ, Rios JJ, Welham S et al.. 2014. Genetical and comparative genomics of Brassica under altered Ca supply identifies Arabidopsis Ca-transporter orthologs. The Plant Cell. 26:2818-2830.

Thorpe P, Mantelin S, Cock PJA, Blok VC, Coke MC, van Den Akker SE, Guzeeva E, Lilley CJ, Smant G, Reid AJ et al.. 2014. Genomic characterisation of the effector complement of the potato cyst nematode Globodera pallida. BMC Genomics. 15

George TS, French AS, Brown LK, Karley AJ, White PJ, Ramsay L, Daniell TJ. 2014. Genotypic variation in the ability of landraces and commercial cereal varieties to avoid manganese deficiency in soils with limited manganese availability: is there a role for root-exuded phytases? Physiologia Plantarum. 151:243-256.

Melkonian R, Moulin R, Bena G, Tisseyre P, Chaintreuil C, Heulin K, Rezkallah N, Klonowska A, Gonzalez S, Simon M et al.. 2014. The geographical patterns of symbiont diversity in the invasive legume Mimosa pudica can be explained by the competitiveness of its symbionts and by the host genotype. Environmental Microbiology. 16:2099-2111.

Schoeb C, Michalet R, Cavieres LA, Pugnaire FI, Brooker RW, Butterfield BJ, Cook BJ, Kikvidze Z, Lortie CJ, Xiao S et al.. 2014. A global analysis of bidirectional interactions in alpine plant communities shows facilitators experiencing strong reciprocal fitness costs. New Phytologist. 202:95-105.

Fanesi A, Raven JA, Giordano M. 2014. Growth rate affects the responses of the green alga Tetraselmis suecica to external perturbations. Plant Cell and Environment. 37:512-519.

Shaw PD, Graham M, Kennedy J, Milne I, Marshall DF. 2014. Helium: visualization of large scale plant pedigrees. BMC Bioinformatics. 15

James MC, Gilbert L, Bowman AS, Forbes KJ. 2014. The heterogeneity, distribution and environmental associations of Borrelia burgdorferi sensu lato, the agent of Lyme borreliosis, in Scotland. Frontiers in Public Health, 2, Article 129. 2

Seward AM, Beale CM, Gilbert L, Jones TH, Thomas RJ. 2014. The impact of increased food availability on reproduction in a long-distance migratory bird: Implications for Environmental Change? PLoS ONE. 9:e11180.

Saunders M, Tobin B, Sweeney C, Gloria M, Benanti G, Cacciotti E, Osborne BA. 2014. Impacts of exceptional and extreme inter-annual climatic events on the net ecosystem carbon dioxide exchange of a Sitka spruce forest. Agricultural and Forest Meteorology. 184:147-157.

Matthews RB, van Noordwijk M, Lambin E, Meyfroidt P, Gupta J, Verchot L, Veldkamp E, Hergoualc'h K. 2014. Implementing REDD+ (Reducing Emissions from Deforestation and Degradation): evidence on governance, evaluation and impacts from the REDD-ALERT project. Mitigation and Adaptation Strategies for Global Change. 19:907-925.

White PJ, George TS, Hammond JP, James EK. 2014. Improving crop mineral nutrition. Plant and Soil. 384:1-5.

Reed MS, Moxey A, Prager K, Hanley N, Skates J, Bonn A, Evans CD, Glenk K, Thomson K. 2014. Improving the link between payments and the provision of ecosystem services in agri-environment schemes. Ecosystem Services. 9:44-53.

Brown EM, Latimer C, Allsopp P, Ternan NG, McMullan G, McDougall GJ, Stewart D, Crozier A, Rowland I, Gill CIR. 2014. In vitro and in vivo models of colorectal cancer: antigenotoxic activity of berries. Journal of Agricultural and Food Chemistry. 62:3852-3866.

Babikova Z, Gilbert L, Randall KC, Bruce TJA, Pickett JA, Johnson D. 2014. Increasing phosphorus supply is not the mechanism by which arbuscular mycorrhiza increase attractiveness of bean (Vicia faba) to aphids. Journal of Experimental Botany. 65:5231-5241.

Dockter C, Gruszka D, Braumann I, Druka A, Druka I, Franckowiak J, Gough SP, Janeczko A, Kurowska M, Lundqvist J et al.. 2014. Induced variations in Brassinosteroid genes define barley height and sturdiness, and expand the green revolution genetic toolkit. Plant Physiology. 166:1912-1927.

Wilson L, Wilson MJ, Green J, Patey I. 2014. The influence of clay mineralogy on formation damage in North Sea reservoir sandstones: a review with illustrative examples. Earth Science Reviews. 134:70-80.

van der Wal R, Miller DR, Irvine RJ, Fiorini S, Amar A, Yearley S, Gill R, Dandy N. 2014. The influence of information provision on people's landscape preferences: a case study on understorey vegetation of deer-browsed woodlands. Landscape and Urban Planning. 124:129-139.

Peukert S, Griffith BA, Murray PJ, Macleod CJA, Brazier RE. 2014. Intensive management in grasslands causes diffuse water pollution at the farm scale. Journal of Environmental Quality. 43:2009-2023.

Goss EM, Tabima JF, Cooke DEL, Restrepo S, Fry WE, Forbes GA, Fieland VJ, Cardenas M, Grunwald NJ. 2014. The Irish potato famine pathogen Phytophthora infestans originated in central Mexico rather than the Andes. Proceedings of the National Academy of Sciences of the USA. 111:8791-8796.

Edwards P, Pignotti E, Mellish C, Eckhardt A, Ponnamperuma K, Bouttaz T, Philip L, Pangbourne K, Polhill JG, Gotts NM. 2014. Lessons learnt from the deployment of a semantic virtual research environment. Journal of Web Semantics. 27-28:70-77.

Zhang ZL, Leith C, Rhind SM, Ker C, Osprey M, Kyle C, Coull MC, Thomson C, Green G, Maderova L et al.. 2014. Long term temporal and spatial changes in the distribution of polychlorinated biphenyls and polybrominated diphenyl ethers in Scottish soils. Science of the Total Environment. 468-469:158-164.

Littlewood NA, Greenwood S, Quin S, L.O. Pakeman RJ, Woodin SJ. 2014. Long-term trends in restored moorland vegetation assemblages. Community Ecology.. 15:104-112.

Zakharova A, Midwood AJ, Hunt JE, Graham SL, Artz RRE, Turnbull MH, Whitehead D, Millard P. 2014. Loss of labile carbon following soil disturbance determinded by measurement of respired d¹³CO. Soil Biology and Biochemistry. 68:125-132.

Sulpice R, Ishihara H, Schlereth A, Cawthray GR, Encke B, Giavalisco P, Ivakov A, Arrivault S, Jost R, Krohn N et al.. 2014. Low levels of ribosomal RNA partly account for the very high photosynthetic phosphorus-use efficiency of Proteaceae species. Plant Cell and Environment. 37:1276-1298.

Chen X, Daniell TJ, Neilson R, O'Flaherty V, Griffiths BS. 2014. Microbial and microfaunal communities in phosphorus limited, grazed grassland change composition but maintain homeostatic nutrient stoichiometry. Soil Biology and Biochemistry. 75:94-101.

Senapati N, Hulugalle NR, Smith P, Wilson BR, Yeluripati JB, Daniel H, Ghosh S, Lockwood P. 2014. Modelling soil organic carbon storage with RothC in irrigated Vertisols under cotton cropping systems in the sub-tropics. Soil and Tillage Research. 143:38-49.

McIntyre N, Ballard C, Bruen M, Bulygina N, Buytaert W, Cluckie I, Dunn SM, Ehret U, Ewen J, Gelfan A et al.. 2014. Modelling the hydrological impacts of rural land use change. Hydrology Research. 45:737-754.

Gamado KM, Streftaris G, Zachary S. 2014. Modelling under-reporting in epidemics. Journal of Mathematical Biology. 69:737-765.

Wiesel L, Newton AC, Elliot I, Booty D, Gilroy EM, Birch PRJ, Hein I. 2014. Molecular effects of resistance elicitors from biological origin and their potential for crop protection. Frontiers in Plant Science. 5

Chmielewska B, Janiak A, Karcz J, Guzy-Wrobelska J, Forster BP, Nawrot M, Rusek A, Smyda P, Kedziorski P, Maluszynski M et al.. 2014. Morphological, genetic and molecular characteristics of barley root hair mutants. Journal of Applied Genetics. 55:433-447.

Poggio L, Gimona A. 2014. National scale 3D modelling of soil organic carbon stocks with uncertainty propagation - an example from Scotland. Geoderma. 232-234:284-299.

Lau MSY, Marion G, Streftaris G, Gibson GJ. 2014. New model diagnostics for spatio-temporal systems in epidemiology and ecology. Journal of The Royal Society Interface. 11:ArticleNo.20131093..

Ernfors M, Brennan FP, Richards KG, McGeough KL, Griffiths BS, Laughlin RJ, Watson CJ, Philippot L, Grant J, Minet E et al.. 2014. The nitrification inhibitor dicyandiamide increases mineralisation-immobilisation turnover in slurry amended grassland soil. Journal of Agricultural Science. 152:S137-S149.

Giordano M, Raven JA. 2014. Nitrogen and sulfur assimilation in plants and algae. Aquatic Botany. 118:45-61.

Song Y, Glasbey CA, Polder G, van der Heijden GWAM. 2014. Non-destructive automatic leaf area measurements by combining stereo and time-of-flight images. IET Computer Vision. 8:391-403.

Craig T, Polhill JG, Dent I, Galan-Diaz C, Heslop S. 2014. The North East Scotland Energy Monitoring Project: Exploring relationships between household occupants and energy usage. Energy and Buildings. 75:493-503.

Ginetti B, Moricca S, Squires JN, Cooke DEL, Ragazzi A, Jung T. 2014. Phytophthora acerina sp. nov., a new species causing bleeding cankers and dieback of Acer pseudoplatanus trees in planted forests in northern Italy. Plant Pathology. 63:858-876.

Gonzalez-Puente M, Campos M, McCall MK, Munoz-Rojas J. 2014. Places beyond maps; integrating spatial map analysis and perception studies to unravel landscape change in a Mediterranean mountain area (NE Spain). Applied Geography. 52:182-190.

Avery LM, Anchang KY, Tumwesige V, Strachan N, Goude PJ. 2014. Potential for pathogen reduction in anaerobic digestion and biogas generation in Sub-Saharan Africa. Biomass and Bioenergy. 70:112-124.

Henry MK, Tongue SC, Evans J, Webster C, McKendrick IJ, Gunn GJ. 2014. The potential of chlorhexidine lavage to reduce the shedding of VTEC 0157 from cattle. Cattle Practice. 22:280-280.

Hudson LN, Newbold T, Contu S, Hill SLL, Lysenko I, De Palma A, Phillips HRP, Senior RA, Bennett DJ, Booth H et al.. 2014. The PREDICTS database: a global database of how local terrestrial biodiversity responds to human impacts. Ecology and Evolution. 4:4701-4735.

Gebreegziabher Z, Naik L, Melamu R, Balana BB. 2014. Prospects and challenges for urban application of biogas installations in Sub-Saharan Africa. Biomass and Bioenergy. 70:130-140.

Rhee YJ, Hillier S, Pendlowski H, Gadd GM. 2014. Pyromorphite formation in a fungal biofilm community growing on lead metal. Environmental Microbiology. 16:1441-1451.

Tondelli A, Francia E, Visioni A, Comadran J, Mastrangelo AM, Akar T, Al-Yassin A, Ceccarelli S, Grando S, Benbelkacem A et al.. 2014. QTLs for barley yield adaptation to Mediterranean environments in the 'Nure' x 'Tremois' biparental population. Euphytica. 197:73-86.

Dallimer M, Tinch D, Hanley N, Irvine KN, Rourquette JR, Warren PH, Maltby L, Gaston KJ, Armsworth PR. 2014. Quantifying preferences for the natural world using monetary and non-monetary assessments of value. Conservation Biology. 28:404-413.

Jones CM, Spor A, Brennan FP, Breuol MC, Bru D, Lemanceau P, Griffiths B, Hallin S, Philppot L. 2014. Recently identified microbial guild mediates soil N2O sink capacity. Nature Climate Change. 4:801-805.

Pedersen S, Andreassen HP, Keith DA, Skarpe C, Dickman CR, Gordon IJ, Crowther MS, McArthur C. 2014. Relationships between native small mammals and native and introduced large herbivores. Austral Ecology. 39:236-243.

Bradford MA, Wood SA, Bardgett RD, Black HIJ, Bonkowski M, Eggers T, Grayston SJ, Kandeler E, Manning P, Setala H et al.. 2014. Reply to Byrnes et al.: Aggregation can obscure understanding of ecosystem multifunctionality. Proceedings of the National Academy of Sciences of the United States of America. 111:E5491-E5491.

Ghimire SK, Jones G. 2014. Restoration of a gauging weir to aid fish passage. Journal of Hydro-Environment Research. 8:43-49.

Mitra A, Flynn KJ, Burkholder JM, Berge T, Calbet A, Raven JA, Graneli E, Glibert PM, Hansen PJ, Stoecker DK et al.. 2014. The role of mixotrophic protists in the biological carbon pump. Biogeosciences. 11:995-1005.

Haling RE, Brown LK, Bengough AG, Valentine TA, White PJ, Young IM, George TS. 2014. Root hair length and rhizosheath mass depend on soil porosity, strength and water content in barley genotypes. Planta. 239:643-651.

Ball BC, Griffiths BS, Topp CFE, Wheatley R, Walker RL, Rees RM, Watson CA, Gordon H, Hallett PD, McKenzie BM et al.. 2014. Seasonal nitrous oxide emissions in field soils under soil management of reduced tillage, compost application or organic farming. Agriculture, Ecosystems and Environment. 189:17-180.

Ariyadasa R, Mascher M, Nussbaumer T, Schulte D, Frenkel Z, Poursarebani N, Zhou RN, Steuernagel B, Gundlach H, Taudien S et al.. 2014. A sequence-ready physical map of barley anchored genetically by two million single-nucleotide polymorphisms. Plant Physiology. 164:412-423.

Muller B, Balbi S, Buchmann CM, de Sousa L, Dressler G, Groeneveld J, Klassert CJ, Bao Le Q, Millington JDA, Nolzen H et al.. 2014. Standardized and transparent model descriptionsfor agent-based models - current status and prospects. Environmental Modelling and Software. 55:156-163.

O'Malley-James JT, Cockell CS, Greaves JS, Raven JA. 2014. Swansong biospheres II: the final signs of life on terrestrial planets near the end of their habitable lifetimes. International Journal of Astrobiology. 13:229-243.

Hold GL, Berry S, Saunders KA, Drew J, Mayer C, Brookes H, Gay NJ, El-Omar EM, Bryant CE. 2014. The TLR4 D299G and T399I SNPs are constitutively active to up-regulate expression of Trif-dependent genes. PLoS ONE. 9:e111460.

Tomkins JL, Aungier J, Hazel W, Gilbert L. 2014. Towards an evolutionary understanding of host questing behaviour in the tick lxodes ricinus. PLoS ONE. 9:e110028.

McDougall GJ, Conner S, Pereira-Caro G, Gonzalez-Barrio R, Brown EM, Verrall S, Stewart D, Moffet T, Ibars M, Lawther R et al.. 2014. Tracking (poly)phenol components from raspberries in ileal fluid. Journal of Agricultural and Food Chemistry. 62:7631-7641.

Ceci A, Rhee YJ, Kierans M, Hillier S, Pendlowski H, Gray N, Persiani AM, Gadd GM. 2014. Transformation of vanadinite (Pb5(VO4)3Cl) by fungi. Environmental Microbiology. Published online..

Babikova Z, Johnson D, Bruce TJA, Pickett JA, Gilbert L. 2014. Underground allies: how and why do mycelial networks help plants defend themselves? BioEssays. 36:21-26.

George TS, Brown LK, Ramsay L, White PJ, Newton AC, Bengough AG, Russell J, Thomas WTB. 2014. Understanding the genetic control and physiological traits associated with rhizosheath production by barley (Hordeum vulgare L.). New Phytologist. 203:195-205.

Russell J, Hackett C, Hedley P, Lui H, Milne L, Bayer M, Marshall D, Jorgensen L, Gordon S, Brennan R. 2014. The use of genotyping by sequencing in blackcurrant (Ribes nigrum): developing high-resolution linkage maps in species without reference genome sequences. Molecular Breeding. 33:835-849.

Martin-Ortega J, Allot TEH, Glenk K, Schaafsma M. 2014. Valuing water quality improvements from peatland restoration: evidence and challenges. Ecosystem Services. 9:34-43.

Dallimer M, Davies ZG, Irvine KN, Maltby L, Warren PH, Gaston KJ, Armsworth PR. 2014. What personal and environmental factors determine frequency of urban greenspace use? International Journal of Environmental Research and Public Health. 11:7977-7992.

Boden L, Auty H, Goddard P, Stott A, Ball N, Mellor D. 2014. Working at the science-policy interface. Veterinary Record. 174:165-167.

Slee B, Brown I, Donnelly D, Gordon IJ, Matthews KB, Towers W. 2014. The ‘squeezed middle’: identifying and addressing conflicting demands on intermediate quality farmland in Scotland. Land Use Policy. 41:206-216.

2013

Jones CI, Grima DP, Waldron JA, Jones S, Parker HN, Newbury SF. 2013. The 5 '-3 ' exoribonuclease Pacman (Xrn1) regulates expression of the heat shock protein Hsp67Bc and the microRNA miR-277-3p in Drosophila wing imaginal discs. RNA Biology. 10:1345-1355.

Pettorelli N, Evans DM, Garner TWJ, Katzner T, Gompper ME, Altwegg R, Branch TA, Johnson JA, Acevedo-Whitehouse K, DaVolls L et al.. 2013. Addressing gender imbalances in animal conservation. Animal Conservation. 16:131-133.

Hartley IP, Garnett MH, Sommerkorn M, Hopkins DW, Wookey PA. 2013. The age of CO2 released from soils in contrasting ecosystems during the arctic winter. Soil Biology and Biochemistry. 63:1-4.

McCouch S, Baute GJ, Bradeen J, Bramel P, Bretting PK, Buckler E, Burke JM, Charest D, Cloutier S, Cole G et al.. 2013. Agriculture: Feeding the future. Nature. 499:23-24.

Butterfield BJ, Cavieres LA, Callaway RM, Cook BJ, Kikvidze Z, Lortie CJ, Michalet R, Pugnaire FI, Schoeb C, Xiao S et al.. 2013. Alpine cushion plants inhibit the loss of phylogenetic diversity in severe environments. Ecology Letters. 16:478-486.

Porter R, Norman RA, Gilbert L. 2013. An alternative to killing? Treating wildlife to protect a valuable species from a shared parasite Parasitology. 140:247-257.

Ghimire SK. 2013. Application of a 2D hydrodynamic model for assessing flood risk from extreme storm events. Climate. 1:148-162.

Jones HG, Hillis RM, Gordon SL, Brennan RM. 2013. An approach to the determination of winter chill requirements for different Ribes cultivars. Plant Biology. 15:18-27.

Giannoccaro G, Prosperi M, Alcon F, Martin-Ortega J. 2013. Assessment of irrigation pricing policies: a data development analysis approach. Environment and Natural Resources Research. 3:10-23.

Giaramida L, Manage PM, Edwards C, Singh BK, Lawton LA. 2013. Bacterial communities' response to microcystins exposure and nutrient availability: Linking degradation capacity to community structure. International Biodeterioration and Biodegradation. 84:111-117.

Mascher M, Richmond TA, Gerhardt DJ, Himmelbach A, Clissold L, Sampath D, Ayling S, Steuernagel B, Pfeifer M, D'Ascenzo M et al.. 2013. Barley whole exome capture: a tool for genomic research in the genus Hordeum and beyond. Plant Journal. 76:494-505.

Seim GL, Ahn CI, Bodis MS, Luwedde F, Miller DD, Hillier S, Tako E, Glahn RP, Young SL. 2013. Bioavailability of iron in geophagic earths and clay minerals, and their effect on dietary iron absorption using an in vitro digestion/Caco-2 cell model. Food and Function. 4:1263-1270.

Sheu SY, Chou JH, Bontemps C, Elliott GN, Gross E, dos Reis Jr FB, Melkonian RJ, Moulin L, James EK, Sprent JI et al.. 2013. Burkholderia diazotrophica sp. nov., isolated from root nodules of Mimosa spp. International Journal of Systematic and Applied Microbiology. 63:435-441.

Bournaud C, de Faria S, Santos JMF, Tisseyre P, Silva M, Chaintreuil C, Gross E, James EK, Prin Y, Moulin L. 2013. Burkholderia species are the most common and preferred nodulating symbionts of the Piptadenia group (Tribe Mimoseae). PLoS ONE. 8:e63478.

Vanholme R, Cesarino I, Rataj K, Xiao Y, Sundin L, Goeminne G, Kim H, Cross J, Morreel K, Araujo P et al.. 2013. Caffeoyl Shikimate Esterase (CSE) is an enzyme in the lignin biosynthetic pathway. Science. 341:1103-1106.

Gilbert L. 2013. Can restoration of afforested peatland regulate pests and disease? Journal of Applied Ecology. 50:1226-1233.

Katzner T, Johnson JA, Evans DM, Garner TWJ, Gompper ME, Altwegg R, Branch TA, Gordon IJ, Pettorelli N. 2013. Challenges and opportunities for animal conservation from renewable energy development. Animal Conservation. 16:367-369.

Gotame TP, Andersen L, Petersen KK, Pedersen HL, Ottosen CO, Graham J. 2013. Chlorophyll fluorescence and flowering behaviour of annual-fruiting raspberry cultivars under elevated temperature regimes. European Journal of Horticultural Science. 78:193-202.

Kenyon F, McBean D, Greer AW, Burgess CGS, Morrison AA, Bartley DJ, Bartley Y, Devin L, Nath M, Jackson F. 2013. A comparative study of the effects of four treatment regimes on ivermectin efficacy, body weight and pasture contamination in lambs naturally infected with gastrointestinal nematodes in Scotland. International Journal for Parasitology - Drugs and Drug Resistance. 3:77-84.

Brown LK, George TS, Dupuy LX, White PJ. 2013. A conceptual model of root hair ideotypes for future agricultural environments: what combination of traits should be targeted to cope with limited P availability? Annals of Botany. 112:317-330.

Sharma SK, Bolser D, de Boer J, Sonderkaer M, Amoros W, Carboni MF, D'Ambrosio JM, de la Cruz G, Di Genova A, Douches DS et al.. 2013. Construction of reference chromosome-scale Pseudomolecules for potato: integrating the potato genome with genetic and physical maps. G3-Genomes Genomes Genetics. 3:2031-2047.

Gregory PJ, Atkinson CJ, Bengough AG, Else MA, Fernandez-Fernandez F, Harrison RJ, Schmidt S. 2013. Contributions of roots and rootstocks to sustainable, intensified crop production. Journal of Experimental Botany. 64:1209-1222.

McCallum S, Cullen DW, Hedley P, Simpson C, Hancock RD, Milne L, Hackett CA, Graham J. 2013. Control of fruit quality traits in red raspberry, a review from the James Hutton Institute. Aspects of Applied Biology. 119:1-16.

Lukhovitskaya NI, Thaduri S, Garushyants SK, Torrance L, Savenkov EI. 2013. Deciphering the mechanism of defective interfering RNA (DI RNA) biogenesis reveals that a viral protein and the DI RNA act antagonistically in virus infection. Journal of Virology. 87:6091-6103.

Gushchin VA, Lukhovitskaya NI, Andreev DE, Wright KM, Taliansky ME, Solovyev AG, Morozov S, MacFarlane SA. 2013. Dynamic localization of two tobamovirus ORF6 proteins involves distinct organellar compartments. Journal of General Virology. 94:230-240.

Gomez-Limon JA, Martin-Ortega J. 2013. The economic analysis in the implementation of the water framework directive in Spain. International Journal of River Basin Management. 11:301-310.

Aspinall R, Gregory P. 2013. Ecosystem services: nature's balance sheet. Science. 342:421-421.

Burthe S, Newell MA, Goodman G, Butler A, Bregnballe T, Harris E, Wanless S, Cunningham EJA, Daunt F. 2013. Endoscopy as a novel method for assessing endoparasite burdens in free-ranging European shags (Phalacrocorax aristotelis). Methods in Ecology and Evolution. 4:207-216.

Paterson A, Kassim A, McCallum S, Woodhead M, Smith K, Zait D, Graham J. 2013. Environmental and seasonal influences on red raspberry flavour volatiles and identification of quantitative trait loci (QTL) and candidate genes. Theoretical and Applied Genetics. 126:33-48.

Cameron DR, Van Oijen M, Werner C, Butterbach-Bahl K, Grote R, Haas E, Heuvelink GBM, Kiese R, Kros J, Kuhnert M et al.. 2013. Environmental change impacts on the C- and N-cycle of European forests: a model comparison study. Biogeosciences. 10:1751-1773.

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Fazey I, Evely AC, Reed MR, Stringer LC, Kruijsen JHJ, White PCL, Newsham A, Jin L, Cortazzi M, Phillipson J et al.. 2013. Knowledge Exchange: a review and research agenda for environmental management. Environmental Conservation. 40:19-36.

Reed MS, Fazey I, Stringer LC, Raymond CM, Akhtar-Schuster M, Begni G, Bigas H, Brehm S, Briggs J, Bryce R et al.. 2013. Knowledge management for land degradation monitoring and assessment: an analysis of contemporary thinking. Land Degradation and Development. 24:307-322.

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Kapfer J, Birks HJB, Felde VA, Klanderud K, Martinessen T, Ross LC, Schei FH, Virtanen R, Grytnes JA. 2013. Long-term vegetation stability in northern Europe as assessed by changes in species co-occurrences. Plant Ecology and Biodiversity. 6:289-302.

Koichi K, Mayer R, Kaur K, Cottrell A, Gordon IJ. 2013. The management implications of Aboriginal perceptions of feral pigs (Sus scrofa) in Northern Queensland. A case of feral pig management in the Wet Tropics World Heritage Area, Australia. Journal of Australian Indigenous Issues. 16:53-72.

White PJ, George TS, Gregory PJ, Bengough AG, Hallett PD, McKenzie BM. 2013. Matching roots to their environment. Annals of Botany. 112:207-222.

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Wishart J, George TS, Brown LK, Ramsay G, Bradshaw JE, White PJ, Gregory PJ. 2013. Measuring variation in potato roots in both field and glasshouse: the search for useful yield predictors and a simple screen for root traits. Plant and Soil. 368:231-249.

Mayor DJ, Gray NB, Elver-Evans J, Midwood AJ, Thornton B. 2013. Metal-macrofauna interactions determine microbial community structure and function in copper contaminated sediments. PLoS ONE. 8:e64940.

Dennis PG, Sparrow AD, Gregorich EG, Novis P, Elberling B, Greenfield LG, Hopkins DW. 2013. Microbial responses to carbon and nitrogen supplementation in an Antarctic dry valley soil. Soil Biology and Biochemistry. 25:55-61.

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Flynn KJ, Stoecker DK, Mitra A, Raven JA, Glibert PM, Hansen PJ, Graneli E, Burkholder JM. 2013. Misuse of the phytoplanktonzooplankton dichotomy: the need to assign organisms as mixotrophs within plankton functional types. Journal of Plankton Research. 35:3-11.

Porter R, Norman RA, Gilbert L. 2013. A model to test how ticks and louping ill virus can be controlled by treating red grouse with acaricide. Medical and Veterinary Entomology. 27:237-246.

Elledge AE, McAlpine CA, Murray PJ, Gordon IJ. 2013. Modelling habitat preferences of feral pigs for rooting in lowland rainforest. Biological Invasions. 15:1523-1535.

Poggio L, Gimona A. 2013. Modelling high resolution RS data with the aid of coarse resolution data and ancillary data. International Journal of Applied Earth Observations and Geoinformation. 23:360-371.

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Gontikaki E, Thornton B, Huvenne VAI, Witte U. 2013. Negative priming effect on organic matter mineralisation in NE Atlantic slope sediments. PLoS ONE. 8:e67722.

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Chianini F, Siso S, Ricci E, Eaton SL, Finlayson J, Pang Y, Hamilton S, Steele P, Reid HW, Cantile C et al.. 2013. Pathogenesis of scrapie in ARQ/ARQ sheep after subcutaneous infection: Effect of lymphadenectomy and immune cell subset changes in relation to prion protein accumulation. Veterinary Immunology and Immunopathology. 152:348-358.

Skelsey P, With KA, Garrett KA. 2013. Pest and disease management: Why we shouldn't go against the grain. PLoS ONE. 8:e75892.

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Senapati N, Smith P, Wilson B, Yeluripati JB, Daniel H, Lockwood P, Ghosh S. 2013. Projections of changes in grassland soil organic carbon under climate change are relatively insensitive to methods of model initialization. European Journal of Soil Science. 64:229-238.

Griffiths BS, Bracewell JM, Robertson GW, Bignell DE. 2013. Pyrolysis-mass spectrometry confirms enrichment of lignin in the faeces of a wood-feeding termite, Zootermopsis nevadensis and depletion of peptides in a soil-feeder, Cubitermes ugandensis. Soil Biology and Biochemistry. 57:957-959.

Mansour E, Casas AM, Gracia MP, Molina-Cano JL, Moralejo M, Cattivelli L, Thomas WTB, Igartua E. 2013. Quantitative trait loci for agronomic traits in an elite barley population for Mediterranean conditions. Molecular Breeding. 33:249-265.

Kildea S, Quinn L, Mehenni-Ciz J, Cooke DEL, Perez FM, Deahl KL, Griffin D, Cooke LR. 2013. Re-emergence of the Ib mitochondrial haplotype within the British and Irish Phytophthora infestans populations. European Journal of Plant Pathology. 135:237-242.

Critchley CNR, Mitchell RJ, Rose RJ, Griffiths JB, Jackson E, Scott H, Davies OD. 2013. Re-establishment of Calluna vulgaris (L.) Hull in an eight-year grazing experiment on upland acid grassland. Journal of Nature Conservation. 21:22-30.

Poggio L, Gimona A, Brewer M. 2013. Regional scale mapping of soil properties and their uncertainty with a large number of satellite-derived covariates. Geoderma. 209-210:1-14.

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Lyons R, Iwase A, Gansewig T, Sherstnev A, Duc C, Barton GJ, Hanada K, Higuchi-Takeuchi M, Matsui M, Sugimoto K et al.. 2013. The RNA-binding protein FPA regulates flg22-triggered defense responses and transcription factor activity by alternative polyadenylation. Scientific Reports. 3

Schmidt S, Gregory PJ, Grinev DV, Bengough AG. 2013. Root elongation rate is correlated with the length of the bare root apex of maize and lupin roots despite contrasting responses of root growth to compact and dry soils. Plant and Soil. 372:609-618.

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Wang X, Richards J, Gross T, Druka A, Kleinhofs A, Steffenson B, Acevedo M, Brueggeman R. 2013. The rpg4-mediated resistance to wheat stem rust (Puccinia graminis) in barley (Hordeum vulgare) requires Rpg5 gene, a second NBS-LRR gene, and an actin depolymerization factor. Molecular Plant-Microbe Interactions. 26:407-418.

McLellan H, Boevink PC, Armstrong MR, Pritchard L, Gomez S, Morales J, Whisson SC, Beynon JL, Birch PRJ. 2013. An RxLR effector from Phytophthora infestans prevents re-localisation of two plant NAC transcription factors from the endoplasmic reticulum to the nucleus. PLoS Pathogens. 9:e1003670.

Hodgson JC, Dagleish MP, Gibbard L, Bayne CW, Finlayson J, Moon GM, Nath M. 2013. Seven strains of mice as potential models of bovine pasteurellosis following intranasal challenge with a bovine pneumonic strain of Pasteurella multocida A:3; comparisons of disease and pathological outcomes. Research in Veterinary Science. 94:634-640.

Gushchin VA, Andreev DE, Taliansky ME, MacFarlane SE, Solovyev AG, Morozov SY. 2013. Single amino acid substitution in the tobacco mosaic virus ORF6 protein suppresses formation of complex with eEF1A and cooperative nucleic acids binding in vitro. Doklady Biochemistry and Biophysics. 448:1-4.

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Sargent F, Davidson FA, Kelly CL, Binny R, Christodoulides N, Gibson D, Johansson E, Kozyrska K, Lado LL, MacCallum J et al.. 2013. A synthetic system for expression of components of a bacterial microcompartment. Microbiology-SGM. 159:2427-2436.

Jones JT, Haegeman A, Danchin EGJ, Gaur HS, Helder J, Jones MGK, Kikuchi T, Manzanilla-Lopez R, Palomares-Rius JE, Wesemael WML et al.. 2013. Top 10 plant parasitic nematodes in molecular plant pathology. Molecular Plant Pathology. 14:946-961.

Koljalg U, Nilsson RH, Abarenkov K, Tedersoo L, Taylor AFS, Bahram M, Bates ST, Bruns TD, Bengtsson-Palme J, Callaghan TM et al.. 2013. Towards a unified paradigm for sequence-based identification of fungi. Molecular Ecology. 22:5271-5277.

Babikova Z, Gilbert L, Bruce TJA, Birkett M, Caulfield JC, Woodcock C, Pickett JA, Johnson D. 2013. Underground signals carried through common mycelial networks warn neighbouring plants of aphid attack. Ecology Letters. 16:835-843.

Schoeb C, Armas C, Guler M, Prieto I, Pugnaire FI. 2013. Variability in functional traits mediates plant interactions along stress gradients. Journal of Ecology. 101:753-762.

Houston K, McKim S, Comadran J, Bonar N, Druka I, Uzrek E, Cirillo E, Guzy-Wrobelska J, Collins N, Halpin C et al.. 2013. Variation in the interaction between alleles of HvAPETALA2 and microRNA172 determines the density of grains on the barley inflorescence. Proceedings of the National Academy of Sciences of the USA. 110:16675-16680.

Koichi K, Cottrell A, Sangha KK, Gordon IJ. 2013. What determines the acceptability of wildlife control methods? A case of feral pig management in the wet tropics world heritage area, Australia Human Dimensions of Wildlife. 18:97-108.

Dawson IK, Guariguata MR, Loo J, Weber JC, Lengkeek A, Bush D, Cornelius J, Guarino L, Kindt R, Orwa C et al.. 2013. What is the relevance of smallholders' agroforestry systems for conserving tropical tree species and genetic diversity in circa situm, in situ and ex situ settings? A review Biodiversity and Conservation. 22:301-324.

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2012

Sutherland LA, Gabriel D, Hathaway-Jenkins L, Pascual U, Schmutz U, Rigby D, Godwin R, Sait S, Sakrabani R, Kunin B et al.. 2012. The 'neighbourhood effect': a multidisciplinary assessment of the case for farmer co-ordination in agri-environmental programmes. Land Use Policy. 29:502-512.

Koichi K, Mayer R, Kaur K, Cottrell AA, Gordon IJ. 2012. Aboriginal rangers' perspectives on feral pigs: are they a pest or a resource? A case study in the wet tropics world heritage area of Northern Queensland Journal of Australian Indigenous Issues. 15:2-19.

Cammarano D, Payero J, Basso B, Stefanova L, Grace P. 2012. Adapting wheat sowing dates to projected climate change in the Australian sub-tropics: analysis of crop water use and yield. Crop and Pasture Science.