Publications list
Filters: First Letter Of Last Name is H [Clear All Filters]
How conserved are the bacterial communities associated with aphids? A detailed assessment of the cabbage aphid (Brevicoryne brassicae) using 16S rDNA Environmental Entomology. 41:1386-1397.
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2012.
Hotspots and hot moments of amino acid N in soil: real-time insights using continuous microdialysis sampling. Soil Biology and Biochemistry, 131, 40-43.. 131:40-43.
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2019.
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2012.
Host gene expression changes in cattle infected with Alcelaphine herpesvirus 1. Virus Research. 169:246-254.
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2012.
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2018.
Horizontal gene transfer in nematodes: a catalyst for plant parasitism? Molecular Plant-Microbe Interactions. 24:879-887.
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2011.
Homozygosity for a single base-pair mutation in the oocytespecific GDF9 gene results in sterility in Thoka sheep. Reproduction. 138:921-933.
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2009.
A homolog of Blade-On-Petiole 1 and 2 (BOP1/2) controls internode length and homeotic changes of the barley inflorescence. Plant Physiology. 171:1113-1127.
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2016.
Homeostasis of cell composition during prolonged darkness. Plant Cell and Environment. 29:2198-2204. Abstract
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2006.
Holocene evolution in weathering and erosion patterns in the Pearl River delta. Geochemistry Geophysics Geosystems. 14:2349-2368.
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2013.
A holistic approach to understanding the desorption of phosphorus in soils. Environmental Science and Technology. 50:3371-3381.
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2016.
Holding it all together? Candidate proteins for the plant Golgi matrix Current Opinion in Plant Biology. 8:632-639. Abstract
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2005.
HIGS: Host-induced gene silencing in the obligate biotrophic fungal pathogen Blumeria graminis. Plant Cell. 22:3130-3141.
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2010.
Highly parallel gene-to-BAC addressing using microarrays. Biotechniques. 50:165-174.
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2011.
A highly mutagenised barley (cv. Golden Promise) TILLING population coupled with strategies for screening-by-sequencing. Plant Methods. 15:ArticleNo.99..
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2019.
Highly efficient nickel (II) removal by sewage sludge biochar supported a-Fe2O3 and a-FeOOH: Sorption characteristics and mechanisms. PLoS ONE. 14:ArticleNo.e0218114..
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2019.
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2013.
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2016.
High-throughput monolithic HPLC method for rapid vitamin C phenotyping of berry fruit. Phytochemical Analysis. 17:284-290. Abstract
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2006.
High-resolution synchrotron imaging shows that root hairs influence rhizosphere soil structure formation. New Phytologist. Published online..
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2017.
High-resolution synchrotron imaging shows that root hairs influence rhizosphere soil structure formation. New Phytologist. 216:124-135.
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2017.
High-protein, reduced-carbohydrate weight-loss diets promote metabolite profiles likely to be detrimental to colonic health. American Journal of Clinical Nutrition. 93:1062-1072.
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2011.
High-nature-value grasslands have the capacity to cope with nutrient impoverishment induced by mowing and livestock grazing. Journal of Applied Ecology. 52:1073-1081.
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2015.
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2011.
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2014.
A high quality Arabidopsis transcriptome for accurate transcript-level analysis of alternative splicing. Nucleic Acids Research. 45:5061-5073.
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2017.
High prevalence of paratuberculosis in rabbits is associated with difficulties in controlling the disease in cattle. Veterinary Journal. 198:267-270.
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2013.
A high intake of industrial or ruminant trans fatty acids does not affect the plasma proteome in healthy men. Proteomics. 11:3928-3934.
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2011.
The high affinity K+ transporter AtHAK5 plays a physiological role in planta at very low K+ concentrations and provides a caesium uptake pathway in Arabidopsis. Journal of Experimental Botany. 59:595-607. Abstract
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2008.
Hierarchical Bayesian models in ecology: Reconstructing species interaction networks from non-homogeneous species abundance data. Ecological Informatics. 11:55-64.
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2012.
Hierarchical Bayesian model approach for estimating soil CO2 flux: a case study in central Hokkaido, Japan. Soil Science and Plant Nutrition. 61:116-132.
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2015.
A hierarchical Bayesian mixture model for repeated dietary records. Food and Chemical Toxicology. 50:320-327.
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2012.
Hierarchical Bayesian calibration of nitrous oxide (N2O) and nitrogen monoxide (NO) flux module of an agro-ecosystem model: ECOSSE. Ecological Modelling. 316:14-27.
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2015.
Heritability of ocular component dimensions in chickens: genetic variants controlling susceptibility to experimentally-induced myopia and pre-treatment eye size are distinct. Investigative Opthalmology & Visual Science. 52:4012-4020.
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2011.
Herbivory and climate as drivers of woody plant growth - do deer decrease the impacts of warming? Ecological Applications. Published online..
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In Press.
Heavy metals in sediment from the urban and rural rivers in Harbin City, Northeast China. International Journal of Environmental Research and Public Health. 16:ArticleNo.4313.
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2019.
Healthy and sustainable diets that meet greenhouse gas emission reduction targets and are affordable for different income groups in the UK. Public Health Nutrition. 22:1503-1517.
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2019.
Haustorium formation and a distinct biotrophic transcriptome characterize infection of Nicotiana benthamiana by the tree pathogen Phytophthora kernoviae. Molecular Plant Pathology. Published online..
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2021.
A hAT superfamily tranposase recruited by the cereal grass genome. Molecular Genetics and Genomics. 275:553-563. Abstract
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2006.
Harpin confers some protection against bacterial pathogens of horticultural crops. The Dundee Conference: Crop Protection in Northern Britain 2016, Dundee, 23-24 February 2016.. :35-42.
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2016.
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2016.
Growth limitation of mountain birch caused by sheep browsing at the altitudinal treeline. Forest Ecology and Management. 261:1344-1352.
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2011.
Greenhouse gas mitigation potential of agricultural land in Great Britain. Soil Use and Management.. 27:491-501.
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2011.
Greenhouse gas emissions from renewable energy sources: A review of lifecycle considerations. Renewable and Sustainable Energy Reviews. 39:461-475.
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2014.
Grazing across grass: shrub boundaries: Can spatial heterogeneity increase resistance? Agriculture, Ecosystems and Environment. 139(1-2):159-166.
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2010.
GrassPlot - a database of multi-scale plant diversity in Palaearctic grasslands. Phytocoenologia. 48:331-347.
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2018.
Grain and straw yield interactions in barley cultivar mixtures. Journal of Agricultural Science. 157:117-128.
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2019.
Glucose uptake by the brain on chronic high-protein weight-loss diets with either moderate or low amounts of carbohydrate. British Journal of Nutrition. 111:586-597.
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2014.
The Globodera pallida SPRYSEC effector GpSPRY-414-2 that suppresses plant defenses targets a regulatory component of the dynamic microtubule network. Frontiers in Plant Science. 9:ArticleNo.1019.
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2018.
Global patterns of potential future plant diversity hidden in soil seed banks. Nature Communications. 12:ArticleNo.023(2021).
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2021.
Global decline in aggregated migrations of large terrestrial mammals. Endangered Species Research. 7:55-76.
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2009.
A global collection of permanent vegetation plots. Journal of Vegetation Science. Journal of Vegetation Science. 33
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2022.
Global climate change and above-belowground insect herbivore interactions. Frontiers in Plant Science. 4:412.
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2013.
Global change effects on plant communities are magnified by time and the number of global change factors imposed. Proceedings of the National Academy of Sciences of the United States of America (PNAS). :ArticleNo.201819027.
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2019.
Global change effects on plant communities are magnified by time and the number of global change factors imposed. Proceedings of the National Academy of Sciences of the United States of America (PNAS). 116:17867-17873.
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2019.
Glasshouse vs field experiments: do they yield ecologically similar results for assessing N impacts on peat mosses? New Phytologist. 195:408-418.
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2012.
Ginger phytochemicals mitigate the obesogenic effects of a high-fat diet in mice: a proteomic and biomarker network analysis. Molecular Nutrition and Food Research. 55:S203-S213.
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2011.
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2013.
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2017.
GERMINATE - A generic database for integrating genotypic and phenotypic information for plant genetic resource collections. Plant Physiology. 139:619-631. Abstract
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2005.
Geophagy and potential health implications: geohelminths, microbes and heavy metals. Transactions of the Royal Society of Tropical Medicine and Hygiene. 104(12):787-795.
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2010.
Geophagy among East African chimpanzees: consumed soils provide protection from plant secondary compounds and bioavailable iron. Environmental Geochemistry and Health. 41:2911-2927.
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2019.
The geographical patterns of symbiont diversity in the invasive legume Mimosa pudica can be explained by the competitiveness of its symbionts and by the host genotype. Environmental Microbiology. 16:2099-2111.
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2014.
Geographical gradient of the eIF4E alleles conferring resistance to potyviruses in pea (Pisum) germplasm. PLoS ONE. 9:e90394-e90394.
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2014.
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2021.
Genotypic effects of the Texel Muscling QTL (TM-QTL) on meat quality in purebred Texel lambs. Meat Science. 89:125-132.
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2011.
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2020.
Genomic selection in multi-environment crop trials. G3- Genes Genomes Genetics. 6:1313-1326.
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2016.
Genomic resources and tools for gene function analysis in potato. International Journal of Plant Genomics. 2008:-216513.
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2008.
Genomic microsatellite adaptive divergence of wild barley by microclimatic stress in 'Evolution Canyon', Israel. Biological Journal of the Linnean Society. 84:205-224. Abstract
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2005.
Genomic insights into the origin of parasitism in the emerging plant pathogen Bursaphelenchus xylophilus. PLoS Pathogens. 7:e1002219.
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2011.
Genomic and phenotypic characterization of myxoma virus from Great Britain reveals multiple evolutionary pathways distinct from those in Australia. PLoS Pathogens. 13:ArticleNo.e1006252.
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2017.
Genomic analysis of 6,000-year-old cultivated grain illuminates the domestication history of barley. Nature Genetics. 48:1089-1093.
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2016.
Genome-wide QTL and bulked transcriptomic analysis reveals new candidate genes for the control of tuber carotenoid content in potato (Solanum tuberosum L.). Theoretical and Applied Genetics. 127:1917-1933.
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2014.
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2010.
Genome-wide association study reveals the genetic complexity of fructan accumulation patterns in barley grain. Journal of Experimental Botany. 72:2383-2402.
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2021.
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2015.
Genome-wide association of yield traits in a nested association mapping population of barley reveals new gene diversity for future breeding. Authors. Journal of Experimental Botany. 69:3811-3822.
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2018.
Genome-wide association mapping of morphological traits to candidate gene resolution in the un-sequenced barley genome. Proceedings of the National Academy of Sciences, USA. 107:21611-21616.
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2010.
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2014.
Genome wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics. 274:515-527springerlink.com/content/7625g78880706u6m/fulltext.pdf. Abstract
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2005.
A genome wide association study of arabinoxylan content in 2-row spring barley grain. PLoS ONE. 12:e0182537.
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2017.
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2014.
Genome wide association mapping for Arabinoxylan content in a collection of tetraploid wheats. PLoS ONE. 10:e0132787.
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2015.
Genome sequencing and mapping reveal loss of heterozygosity as a mechanism for rapid adaptation in the vegetable pathogen phytophthora capsici. Molecular Plant-Microbe Interactions. 25:1350-1360.
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2012.
Genome sequence of the plant-pathogenic bacterium Dickeya dadantii 3937. Journal of Bacteriology. 193:2076-2077.
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2011.
Genome sequence of the pea aphid Acyrthosiphon pisum. PLOS Biology. 8:-e1000313.
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2010.
Genome sequence of the metazoan plant-parasitic nematode Meloidogyne incognita. Nature Biotechnology. 26:909-915.
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2008.
Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans. Nature. 461:393-398.
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2009.
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2016.
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2014.
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2016.
Genome analyses of an aggressive and invasive lineage of the Irish potato famine pathogen. PLoS Pathogens. 8:e1002940.
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2012.
Genetically modified lignin belowground. Nature Biotechnology. 25:168-169. Abstract
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2007.
Genetical and comparative genomics of Brassica under altered Ca supply identifies Arabidopsis Ca-transporter orthologs. The Plant Cell. 26:2818-2830.
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2014.
Genetic resource of European small berries according to Genberry. Sodinninkyste ir Darzininkyste. 27:371-377.
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2008.
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2007.
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2014.
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2015.
Genetic linkage mapping of economically important traits in cultivated tetraploid potato (Solanum tuberosum L.). G3-Genes Genomes Genetics. 5:2357-2364.
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2015.
Genetic linkage mapping in an F2 perennial ryegrass population saturated with DArT markers. Plant Breeding. 131:345-349.
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2012.
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2013.
The genetic ghost of an invasion past: colonization and extinction revealed by historical hybridisation in Senecio. Molecular Ecology. 21:369-387.
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2012.
Genetic diversity in European Pisum germplasm collections. Theoretical and Applied Genetics. 125:367-380.
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2012.
Genetic diversity in caribou linked to past and future climate change. Nature Climate Change. 4:132-137.
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2013.
Genetic diversity and population structure of pea (Pisum sativum L.) varieties derived from combined retrotransposon, microsatellite and morphological marker analysis. Theoretical and Applied Genetics. 117:413-424.
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2008.
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2016.
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2013.
Genetic dissection of quantitative and qualitative traits using a minimum set of barley recombinant chromosome substitution lines. BMC Plant Biology. 18:ArticleNo.340.
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2018.
Genetic dissection of barley morphology and development. Plant Physiology. 155:617-627.
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2011.
Genetic characterization of the HrpL regulon of the fire blight pathogen Erwinia amylovora reveals novel virulence factors. Molecular Plant Pathology. 13:160-173.
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2012.
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2012.
Genetic and QTL analyses of yield and a set of physiological traits in pepper. Euphytica. 190:181-201.
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2013.
Genetic and environmental regulation of plant architectural traits and opportunities for pest and disease control in raspberry. Annals of Applied Biology. 165:318-328.
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2014.
Genetic and environmental effects influencing fruit colour and QTL analysis in raspberry. Theoretical and Applied Genetics. 121:611-627.
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2010.
Genetic analysis of potassium use efficiency in Brassica oleracea. Annals of Botany. 105:1199-1210.
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2010.
Genes driving potato tuber initiation and growth: identification based on transcriptional changes using the POCI array. Functional & Integrative Genomics. 8:329-340. Abstract
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2008.
Generation of nonvernal-obligate, faster-cycling Noccaea caerulescens lines through fast neutron mutagenesis. New Phytologist. 189:409-414.
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2011.
Generation and screening of a BAC library from a diploid potato clone to unravel durable late blight resistance on linkage group IV. International Journal of Plant Genomics. :-51421. Abstract
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2007.
Generating public and private benefits through understanding what drives different types of agritourism. Journal of Rural Studies. 41:129-141.
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2015.
Generating genomic tools for blueberry improvement. International Journal of Fruit Science. 12:276-287.
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2012.
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2014.
Genebank genomics highlights the diversity of a global barley collection. Nature Genetics.
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2019.
Genebank genomics highlights the diversity of a global barley collection. Nature Genetics.
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2019.
Gene stacking in transgenic plants - the challenge for 21st century plant biotechnology. Plant Biotechnology Journal. 3:141-155. Abstract
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2005.
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2011.
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2016.
Future-proofing the farm: On-farm wind turbine development in farm business decision-making. Land Use Policy. 36:102-112.
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2014.
The future of the uplands. Land Use Policy.. Suppl.1:S204-S216.
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2010.
The future of the northeast Atlantic benthic flora in a high CO2 world. Ecology and Evolution. 4:2787-2798.
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2014.
The future of blue carbon science. Nature Communications. 10:ArticleNo.3998.
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2019.
Fungal transformations of uranium oxides. Environmental Microbiology. 9(7):1696-1710.
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2007.
Fungal transformation of metallic lead to pyromorphite in liquid medium. Chemosphere. 113:17-21.
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2014.
Fungal deterioration of barrier concrete used in nuclear waste disposal. Geomicrobiology Journal. 24(7):643-653.
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2007.
Fungal bioweathering of mimetite and a general geomycological model for lead apatite mineral biotransformations. Applied and Environmental Microbiology. 81:4955-4964.
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2015.
Fungal biotransformation of zinc silicate and sulfide mineral ores. Environmental Microbiology. 15:2173-2186.
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2013.
Fungal and bacterial denitrification are differently affected by long-term pH amendment and cultivation of arable soil. Soil Biology and Biochemistry. 54:25-35.
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2012.
Functional traits and local environment predict vegetation responses to disturbance: a pan-European multi-site-experiment. Journal of Ecology. 99:777-787.
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2011.
Functional roles of effectors of plant-parasitic nematodes. Gene. 492:19-31.
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2012.
The functional response of a generalist predator. PLoS ONE. 5(5):e10761.
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2010.
Functional resilience of soil microbial communities depends on both soil structure and microbial community composition. Biology and Fertility of Soils. 44:745-754. Abstract
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2008.
Functional effects of a common single-nucleotide polymorphism (GPX4c718t) in the glutathione peroxidase 4 gene: Interaction with sex. American Journal of Clinical Nutrition. 87:1019-1027. Abstract
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2008.
Functional approaches for assessing plant and invertebrate abundance patterns in arable systems. Basic and Applied Ecology. 10:34-42. Abstract
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2009.
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2020.
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2021.
Fugacity modelling to predict the distribution of organic contaminants in the soil: oil matrix of constructed biopiles. Chemosphere. 71(8):1432-1439.
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2008.
From plants to nematodes: Serratia grimesii BXF1 genome reveals an adaptation to the modulation of multi-species interactions. Microbial Genomics. 4:ArticleNo.000178.
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2018.
From bits to bites: advancement of the Germinate platform to support prebreeding informatics for crop wild relatives. Crop Science. Published online.
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2021.
A framework for valuing spatially targeted peatland restoration. Ecosystem Services. 9:20-33.
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2014.
Framework for quantification of the dynamics of root colonization by Pseudomonas fluorescens isolate SBW25. Frontiers in Microbiology. 11:ArticleNO.585443..
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2020.
FR-H3: a new QTL to assist in the development of fall-sown barley with superior low temperature tolerance. Theoretical and Applied Genetics. 126:335-347.
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2013.
Forty years of change in Scottish grassland vegetation: increased richness, decreased diversity and increased dominance. Biological Conservation. 212:327-336.
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2017.
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2012.
Forging future organizational leaders for sustainability science. Nature Sustainability. 2:647-649.
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2019.
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2013.
A footprint of plant eco-geographic adaptation on the composition of the barley rhizosphere bacterial microbiota. Scientific Reports. 10:ArticleNo.12916.
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2020.
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2011.
Folate in pregnancy and imprinted gene and repeat element methylation in the offspring. American Journal of Clinical Nutrition. 97:94-99.
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2013.
The flux of dissolved nitrogen from the UK - Evaluating the role of soils and land use. Science of the Total Environment. 434:90-100.
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2012.
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2009.
The Floods and Agriculture Risk Matrix (FARM): a decision support tool for effectively communicating flood risk from farmed landscapes. International Journal of River Basin Management.. 11:237-252.
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2013.
Flood risk management in sponge cities: the role of integrated simulation and 3D visualization. International Journal of Disaster Risk Reduction. 39:ArticleNo.101139..
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2019.
Flavonoid profiling and transcriptome analysis reveals new gene-metabolite correlations in tubers of Solanum tuberosum L. Journal of Experimental Botany. 61:1225-1238.
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2010.
Flagella interact with ionic plant lipids to mediate adherence of pathogenic Escherichia coli to fresh produce plants. Environmental Microbiology. 16:2181-2195.
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2014.
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2016.
First recorded occurrence of detrital baddeleyite (ZrO2) in sedimentary rock (Smith Bank Formation, Triassic, Central North Sea). Scottish Journal of Geology. 52:185-189.
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2015.
Fine mapping of a major QTL for awn length in barley using a multiparent mapping population. Theoretical and Applied Genetics. 130:269-281.
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2017.
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2009.
Fighting talk - organisational discourses of the conflict over raptors and grouse moor management in Scotland. Land Use Policy. 77:332-343.
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2018.
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2022.
Field sampling of soil pore water to evaluate trace element mobility and associated environmental risk. Environmental Pollution. 159:3078-3085.
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2011.
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2014.
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2007.
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2012.
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2013.
Fats and function: protein lipid modifications in plant cell signalling. Current Opinion in Plant Biology. 40:63-70.
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2017.
Fat storage influences fasting endurance more than body size in an ungulate. Functional Ecology. 35:1470-1480.
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2021.
Farmers’ preferences toward an outcomebased payment for ecosystem service scheme in Japan. Journal of Agricultural Economics.
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2022.
Farmers' preferences for new environmental policy instruments: determining the acceptability of cross compliance for biodiversity benefits. Journal of Agricultural Economics. 57(3):393-414.
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2006.
Farmers without borders - genetic structuring in century old barley (Hordeum vulgare). Heredity. 114:195-206.
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2014.
FALDO: a semantic standard for describing the location of nucleotide and protein feature annotation. Journal of Biomedical Semantics. 7
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2016.
Faecal biomarkers can distinguish specific mammalian species in modern and past environments. PLoS ONE. 14:ArticleNo.e0211119.
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2019.
Factors influencing the national distribution of polycyclic aromatic hydrocarbons and polychlorinated iphenyls in British soils. Environmental Science and Technology. 40(24):7629-7635.
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2006.
Factors influencing the effectiveness of an agro-environmental project in China. Outlook on Agriculture. 40:157-163.
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2011.
Factors influencing the development of black dot (Colletotrichum coccodes) on potato. Plant Pathology. 65:1484-1491.
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2016.
Factors determining soil nutrient distribution in a small-scaled watershed in the purple soil region of Sichuan Province, China. Soil and Tillage Research. 105(2):300-306.
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2009.
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2011.
Factors affecting the development and control of black dot on potato tubers. Plant Pathology. 64:167-177.
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2015.
Facilitation and biodiversity-ecosystem function relationships in crop production systems and their role in sustainable farming. Journal of Ecology. 109:2054-2067.
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2021.
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2010.
Extreme value analysis of decadal variations in storm surge elevations. Journal of Marine Systems. 67:189-200. Abstract
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2007.
Extraction and identification of antioxidant polyhydroxynaphthoquinone pigments from the sea urchin, Psammechinus miliaris. LWT - Food Science and Technology. 59:455-460.
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2014.
Expression profiling of potato germplasm differentiated in quality traits leads to the identification of candidate flavour and texture genes. Journal of Experimental Botany. 59:4219-4231. Abstract
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2008.
Exposure to pastures fertilised with sewage sludge disrupts bone tissue homeostasis in sheep. The Science of the Total Environment. 407(7):2200-2208.
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2009.
Exposure assessment of carcass disposal options in the event of a notifiable exotic animal disease: application to avian influenza virus. Environmental Science and Technology. 42(9):3145.
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2008.
Exposure assessment for pesticide intake from multiple food products: a Bayesian latent-variable approach. Risk Analysis. 28:1727-1736. Abstract
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2008.
Exploring the role of cell wall-related genes and polysaccharides during plant development. Plants-BASEL. 7:ArticleNo.42.
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2018.
Exploring the longitudinal dynamics of herd BVD antibody test results using model-based clustering. Scientific Reports. 9:ArticleNo.11353.
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2019.
Exploring temporality in socio-ecological resilience through experiences of the 2015-16 El Niño across the Tropics. Global Environmental Change - Human and Policy Dimensions. 55:1-14.
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2019.