Publications list
Filters: First Letter Of Last Name is H [Clear All Filters]
Dissecting the drivers of population cycles: interactions between parasites and mountain hare demography. Ecological Modelling. 222:48-56.
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2011.
Distribution of soil carbon and microbial biomass in arable soils under different tillage regimes. Plant and Soil. 338:17-25.
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2011.
Diversity of carbon use strategies in a kelp forest community: implications for a high CO2 ocean. Global Change Biology. 17:2488-2497.
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2011.
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2011.
Does mother know best? The preference-performance hypothesis and parent-offspring conflict in aboveground-belowground herbivore life cycles Ecological Entomology. 36:117-124.
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2011.
Dominant and diet-responsive groups of bacteria within the human colonic microbiota. International Society for Microbial Ecology (ISME) Journal. 5:220-230.
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2011.
Drought alters carbon fluxes in alpine snowbed ecosystems through contrasting impacts on graminoids and forbs. New Phytologist. 190:740-749.
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2011.
Early response mechanisms of perennial ryegrass (Lolium perenne) to phosphorous deficiency. Annals of Botany. 107:243-254.
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2011.
Effector proteins that modulate plant-insect interactions. Current Opinion in Plant Biology. 14:422-428.
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2011.
Effects of human disturbance on the diet composition of wild red deer Cervus elaphus. European Journal of Wildlife Research. 57:939-948.
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2011.
Elevated atmospheric carbon dioxide impairs the performance of root-feeding vine weevils by modifying root growth and secondary metabolites. Global Change Biology. 17:688-695.
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2011.
Environmental decision support systems (EDSS) development - challenges and best practices. Environmental Modelling and Software. 26:1389-1402.
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2011.
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2011.
Estimation of total leaf area in perennial plants using image analysis. Revista Brasileira de Engenharia Agricola e Ambiental. 15:96-101.
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2011.
Exploiting knowledge of pathogen effectors to enhance late blight resistance in potato. Potato Research. 54:325-340.
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2011.
Exploratory analysis of multiple omics datasets using the adjusted RV coefficient. Statistical Applications in Genetics and Molecular Biology. 10:14.
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2011.
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2011.
Factors influencing the effectiveness of an agro-environmental project in China. Outlook on Agriculture. 40:157-163.
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2011.
Field sampling of soil pore water to evaluate trace element mobility and associated environmental risk. Environmental Pollution. 159:3078-3085.
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2011.
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2011.
Functional traits and local environment predict vegetation responses to disturbance: a pan-European multi-site-experiment. Journal of Ecology. 99:777-787.
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2011.
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2011.
Generation of nonvernal-obligate, faster-cycling Noccaea caerulescens lines through fast neutron mutagenesis. New Phytologist. 189:409-414.
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2011.
Genetic dissection of barley morphology and development. Plant Physiology. 155:617-627.
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2011.
Genome sequence of the plant-pathogenic bacterium Dickeya dadantii 3937. Journal of Bacteriology. 193:2076-2077.
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2011.
Genomic insights into the origin of parasitism in the emerging plant pathogen Bursaphelenchus xylophilus. PLoS Pathogens. 7:e1002219.
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2011.
Genotypic effects of the Texel Muscling QTL (TM-QTL) on meat quality in purebred Texel lambs. Meat Science. 89:125-132.
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2011.
Ginger phytochemicals mitigate the obesogenic effects of a high-fat diet in mice: a proteomic and biomarker network analysis. Molecular Nutrition and Food Research. 55:S203-S213.
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2011.
Greenhouse gas mitigation potential of agricultural land in Great Britain. Soil Use and Management.. 27:491-501.
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2011.
Growth limitation of mountain birch caused by sheep browsing at the altitudinal treeline. Forest Ecology and Management. 261:1344-1352.
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2011.
Heritability of ocular component dimensions in chickens: genetic variants controlling susceptibility to experimentally-induced myopia and pre-treatment eye size are distinct. Investigative Opthalmology & Visual Science. 52:4012-4020.
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2011.
A high intake of industrial or ruminant trans fatty acids does not affect the plasma proteome in healthy men. Proteomics. 11:3928-3934.
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2011.
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2011.
High-protein, reduced-carbohydrate weight-loss diets promote metabolite profiles likely to be detrimental to colonic health. American Journal of Clinical Nutrition. 93:1062-1072.
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2011.
Highly parallel gene-to-BAC addressing using microarrays. Biotechniques. 50:165-174.
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2011.
Horizontal gene transfer in nematodes: a catalyst for plant parasitism? Molecular Plant-Microbe Interactions. 24:879-887.
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2011.
Identification, utilisation and mapping of novel transcriptome-based markers from blackcurrant (Ribes nigrum). BMC Plant Biology. 11:147.
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2011.
The impact of exposure metric choice for cancers related to arsenic in drinking water in Central Europe. Epidemiology. 22:S102-S103.
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2011.
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Improving breeding efficiency in blackcurrant - the application of new selection techniques in Ribes. Acta Horticulturae. 946:157-160.
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2011.
Incentives and enforcement: the institutional design and policy mix for soil conservation in Brandenburg (Germany). Land Degradation and Development, Special Issue, The Challenge of Effective Soil Conservation Policies. 22:111-123.
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2011.
The inflammatory microenvironment in colorectal neoplasia. PLoS ONE. 6:e15366.
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2011.
An integrated assessment of ecosystem carbon pools and fluxes across an oceanic alpine toposequence. Plant and Soil. 345:287-302.
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2011.
Inter-laboratory calibration of new silver orthophosphate comparison materials for stable oxygen isotope analysis of phosphates. Rapid Communications in Mass Spectrometry. 25:579-584.
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2011.
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2011.
Interpretation of reflectance spectra of clay mineral-silica mixtures: implications for Martian clay mineralogy at Mawrth Vallis. Clays and Clay Minerals. 59:400-415.
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2011.
Lack of evidence for an association between MHC diversity and the development of bovine neonatal pancytopenia in Holstein dairy cattle. Veterinary Immunology and Immunopathology. 141:128-132.
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2011.
Legume-nodulating betaproteobacteria: diversity, host range, and future prospects. Molecular Plant-Microbe Interactions. 24:1276-1288.
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2011.
Links between ammonia oxidizer community structure, abundance and nitrification potential in acidic soils. Applied and Environmental Microbiology. 77:4618-4625.
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2011.
Locus-dependent selection in crop-wild hybrids of lettuce under field conditions and its implication for GM crop development. Evolutionary Applications. 4:648-659.
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2011.
Long-term impacts of zinc and copper enriched sewage sludge additions on bacterial, archaeal and fungal communities in arable and grassland soils. Soil Biology and Biochemistry. 43:932-941.
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2011.
Low genetic variation support bottlenecks in Scandinavian red deer. European Journal of Wildlife Research. 57:1137-1150.
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2011.
Managing peatland ecosystem services: current UK policy and future challenges in a changing world. Scottish Geographical Journal. 127:209-230.
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2011.
Metabolism of 2-hydroxy-4-(methylthio)butanoate (HMTBA) in lactating dairy cows. Journal of Dairy Science. 94:1526-1535.
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2011.
Metabolomics of prolonged fasting in humans reveals new catabolic markers. Metabolomics. 7:375-387.
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2011.
Microbial biomass, organic matter mineralization and nitrogen in soils from long-term experimental grassland plots (Palace Leas meadow hay plots, UK). European Journal of Soil Science. 62:95-104.
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2011.
Modelling an ecosystem: the example of agro-ecosystems. Ecological Modelling. 222:1163-1173.
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2011.
Modelling non-stationary dynamic gene regulatory processes with the BGM model. Computational Statistics. 26:199-218.
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2011.
Modelling rotations: can crop sequences explain arable weed seedbank abundance? Weed Research. 51:422-432.
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2011.
Morphological clasification of plant cell deaths. Cell Death and Differentiation. 18:1241-1246.
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2011.
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2011.
Non-homogeneous dynamic Bayesian networks for continuous data. Machine Learning. 83:355-419.
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2011.
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2011.
Observed soil temperature trends associated with climate change in Canada. Journal of Geophysical Research. 116:16pp.
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2011.
Organization and evolution of subtelomeric satellite repeats in the potato genome. Genes Genomes Genetics. 1:85-92.
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2011.
Osmotic responses of different strains of Steinernema carpocapsae. Nematology. 13:845-851.
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2011.
Osmotic stress tolerance of Capsella bursa-pastoris seeds contributes to bet-hedging in arable fields. Association of Applied Biologists - Agricultural Ecology Research: It's Role in Delivering Sustainable Farm Systems, Dundee, 15-16 June 2011. Aspects of Applied Biology. 109:39-40.
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2011.
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2011.
Patterns of polymorphism and linkage disequilibrium in cultivated barley. Theoretical and Applied Genetics. 122:523-531.
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2011.
Pectin engineering to modify product quality in potato. Plant Biotechnology Journal. 9:848-856.
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2011.
Physical response of rigid and non-rigid soils to analogues of biological exudates. European Journal of Soil Science. 62:676-684.
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2011.
Plant-mediated effects of soil invertebrates and summer drought on above-ground multitrophic interactions. Journal of Ecology. 99:57-65.
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2011.
Polyphenol and vitamin C content in European commercial blackcurrant juice products. Food Chemistry. 127:1216-1223.
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2011.
Portfolio optimisation techniques for a mixed-grazing scenario for Australia's rangelands. Natural Resource Modeling. 24:102-116.
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2011.
Potato tuber pectin structure is influenced by pectin methyl esterase activity and impacts on cooked potato texture. Journal of Experimental Botany. 62:371-381.
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2011.
Predicting impacts of climate change on Fasciola hepatica risk. PLoS ONE. 6:e16126.
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2011.
Prepubertal gonadotropin-releasing hormone analog leads to exagerrated behavioral and emotional sex differences in sheep. Hormones and Behavior. 59:22-27.
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2011.
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2011.
Putting plant defences on the map: a test of the idea that plants are better defended at lower latitudes. New Phytologist. 191:777-788.
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2011.
Rates of production and utilization of lactate by microbial communities from the human colon. FEMS Microbiology Ecology. 77:107-119.
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2011.
Regulatory hotspots are associated with plant gene expression under varying soil phosphorus supply in Brassica rapa. Plant Physiology. 156:1230-1241.
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2011.
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2011.
Resistance to powdery mildew in Spanish barley landraces is controlled by different sets of quantitative trait loci. Theoretical and Applied Genetics. 123:1019-1028.
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2011.
Resource limitations on soil microbial activity in an Antarctic dry valley. Soil Science Society of America Journal. 75:2188-2197.
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2011.
Responses of red deer (Cervus elaphus) to regular disturbance by hill walkers. European Journal of Wildlife Research. 57:817-825.
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2011.
A review of biochars' potential role in the remediation, revegetation and restoration of contaminated soils. Environmental Pollution. 159:3269-3282.
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2011.
Rising water temperatures alter lipid dynamics and reduce N-3 essential fatty acid concentrations in Scenedesmus obliquus (Chlorophyta). Journal of Phycology. 47:763-774.
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2011.
Rising water temperatures alter lipid dynamics and reduce N-3 essential fatty acid concentrations in Scenedesmus obliquus (chlorophyta). Journal of Phycology. 47:763-764.
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2011.
Risk of erosion in peat soils - an investigation using Bayesian belief networks. Soil Use and Management. 27:538-549.
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2011.
A robust statistical method for association-based eQTL analysis. PLoS ONE. 6:e23192.
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2011.
Root elongation, water stress, and mechanical impedance: a review of limiting stresses and beneficial root tip traits. Journal of Experimental Botany. 62:59-68.
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2011.
Root exudation of sugars, amino acids, and organic acids by maize as affected by nitrogen, phosphorus, potassium, and iron deficiency. Journal of Plant Nutrition and Soil Science. 174:3-11.
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2011.
Seasonal controls on DOC dynamics in nested upland catchments in NE Scotland. Hydrological Processes. 25:1647-1658.
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2011.
Selective breeding for susceptibility to myopia reveals a gene-environment interaction. Investigative Ophthalmology and Visual Science. 52:4003-4011.
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2011.
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2011.
Shortcomings of political instruments for agricultural soil conservation. Berichte uber Landwirtschaft. 89:331-350.
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2011.
Soil degradation, farming practices, institutions and policy responses: An analytical framework. Land Degradation and Development, Special Issue, The Challenge of Effective Soil Conservation Policies.. 22:32-46.
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2011.
Soil management in relation to sustainable agriculture and ecosystem services. Food Policy. 36:S72-S87.
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2011.
Soil organic matters. European Journal of Soil Science. 62:1-4.
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2011.
Stability and variability of virulence of Phytophthora infestans assessed in a ring test across European laboratories. Plant Pathology. 60:556-565.
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2011.
The strong and the hungry: Bias in capture methods for mountain hares Lepus timidus. Wildlife Biology. 17:311-316.
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2011.
Study of the effect of presence or absence of protozoa on rumen fermentation and microbial protein contribution to the chyme. Journal of Animal Science. 89:4163-4174.
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2011.
Sugar signalling in root responses to low phosphorus availability. Plant Physiology. 156:1033-1040.
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2011.
Syringyl lignin is unaltered by severe sinapyl alcohol dehydrogenase suppression in tobacco. Plant Cell. 23:4492-4506.
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2011.
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2011.
Technical assessment and evaluation of environmental models and software: Letter to the Editor. Environmental Modelling and Software. 26:328-336.
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2011.
The temporal structure of feeding behaviour. American Journal of Physiology - Regulatory, Integrative and Comparative Physiology. 301:R378-R393.
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2011.
Towards an understanding of the nature of resistance to Phytophthora root rot in red raspberry. Theoretical and Applied Genetics. 123:585-601.
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2011.
Transcriptome sequencing of an ecologically important graminivorous sawfly: a resource for marker development. Conservation Genetics Resources. 3:789-795.
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2011.
Turnover of recently assimilated carbon in arctic bryophytes. Oecologia. 167:325-337.
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2011.
Unlocking the barley genome by chromosomal and comparative genomics. Plant Cell. 23:1249-1263.
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2011.
Using artificial fluorescent particles as tracers of livestock wastes within an agricultural catchment. Science of the Total Environment. 409:1095-1103.
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2011.
Vascular plant success in a warming Antarctic may be due to efficient nitrogen acquisition. Nature Climate Change. 1:50-53.
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2011.
Ancient class of translocated oomycete effectors targets the host nucleus. Proceedings of the National Academy of Sciences, USA. 107:17421-17426.
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2010.
Arable plant communities as indicators of farming practice. Agriculture, Ecosystems and Environment. 138:17-26.
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2010.
Ascorbic acid content of blackcurrant fruit is influenced by both genetic and enviromental factors. Functional Plant Science and Biotechnology. 4:40-52.
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2010.
Assessing beef carcass tissue weights using computed tomography spirals of primal cuts. Meat Science. 84:30-38.
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2010.
Automated saccharification assay for determination of digestibility in plant materials. Biotechnology for Biofuels. 3:-23.
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2010.
BacA is essential for bacteroid development in nodules of galegoid, but not phaseoloid, legumes. Journal of Bacteriology. 192:2920-2928.
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2010.
BAX INHIBITOR-1 is required for full susceptibility of barley to powdery mildew. Molecular Plant-Microbe Interactions. 23:1217-1227.
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2010.
Below-ground herbivory and root toughness: a potential model system using lignin-modified tobacco. Physiological Entomology. 35:186-191. Abstract
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2010.
Bioactive berry components: Potential modulators of health benefits. Functional Plant Science and Biotechnology. 4:34-38.
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2010.
Biohydrology: coupling biology and soil hydrology from pores to landscapes preface. Ecohydrology. 3:379-381.
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A Brassica exon array for whole-transcript gene expression profiling. PLoS One. 5:-e12812.
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2010.
Candidate genes associated with bud dormancy release in blackcurrant (Ribes nigrum L.). BMC Plant Biology. 10:-202.
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2010.
Centrifuge modelling of soil slopes reinforced with vegetation. Canadian Geotechnical Journal. 47:1415-1430.
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2010.
Cereal variety identification using MALDI-TOF mass spectrometry SNP genotyping. Journal of Cereal Science. 52:356-361.
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2010.
Characterisation and time course of pulmonary lesions in calves after intratracheal infection with Pasteurella multocida A:3. Journal of Comparative Pathology. 142:157-169.
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2010.
Chemical characterization of microbial-dominated soil organic matter in the Garwood Valley, Antarctica. Geochimica et Cosmochimica Acta. 74:6485-6498.
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2010.
Combining plant resistance and a natural enemy to control Amphorophora idaei. BioControl. 55:321-327.
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2010.
Competition for land. Philosophical Transactions of the Royal Society of London B - Biological Sciences. 365:2941-2957.
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2010.
Coordination of plant cell division and expansion in a simple morphogenetic system. Proceedings of the National Academy of Sciences, USA. 107:2711-2716.
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2010.
Developing a reliable strategy to infer the effective soil hydraulic properties from field evaporation experiments for agro-hydrological models. Agricultural Water Management. 97:399-409.
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Digestion and transportation of bovine spongiform encephalopathy-derived prion protein in the sheep intestine. Journal of General Virology. 91:3116-3123.
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Diversity of human colonic butyrate-producing bacteria revealed by analysis of the butyryl-CoA:acetate CoA-transferase gene. Environmental Microbiology. 12:304-314.
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Does microbial habitat or community structure drive the functional stability of microbes to stresses following re-vegetation of a severely degraded soil? Soil Biology and Biochemistry. 42:850-859.
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2010.
Effect of increased consumption of whole-grain foods on blood pressure and other cardiovascular risk markers in healthy middle-aged persons: a randomised controlled trial. American Journal of Clinical Nutrition. 94:733-740.
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2010.
Effect of method of conservation of timothy on endogenous nitrogen flows in lactating dairy cows. Journal of Dairy Science. 93:4252-4261.
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2010.
Effect of salinity on water relations of wild barley plants differing in salt tolerance. AoB Plants. :-plq006.
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2010.
Effects of group composition on the grazing behaviour of herbivores. Animal Behaviour. 80:527-534.
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2010.
An efficient procedure for normalising ionomics data for Arabidopsis thaliana. New Phytologist. 186:270-274.
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2010.
An eQTL analysis of partial resistance to Puccinia hordei in barley. PLoS One. 5:-e8598.
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2010.
Evaluating energy intake measurement in free-living subjects: when to record and for how long? Public Health Nutrition. 13:172-180.
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2010.
Ex vivo magnetic resonance imaging of crystalline lens dimensions in chicken. Molecular Vision. 16:144-153.
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2010.
Exploiting induced variation to dissect quantitative traits in barley. Biochemical Society Transactions. 38:683-688.
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2010.
Flavonoid profiling and transcriptome analysis reveals new gene-metabolite correlations in tubers of Solanum tuberosum L. Journal of Experimental Botany. 61:1225-1238.
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2010.
Genetic analysis of potassium use efficiency in Brassica oleracea. Annals of Botany. 105:1199-1210.
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2010.
Genetic and environmental effects influencing fruit colour and QTL analysis in raspberry. Theoretical and Applied Genetics. 121:611-627.
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2010.
Genome sequence of the pea aphid Acyrthosiphon pisum. PLOS Biology. 8:-e1000313.
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2010.
Genome-wide association mapping of morphological traits to candidate gene resolution in the un-sequenced barley genome. Proceedings of the National Academy of Sciences, USA. 107:21611-21616.
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HIGS: Host-induced gene silencing in the obligate biotrophic fungal pathogen Blumeria graminis. Plant Cell. 22:3130-3141.
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2010.
The hydrological response of heavy clay grassland soils to rainfall in south-west England using . Rapid Communications in Mass Spectrometry. 24:475-482.
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Impact of sulphur fertilisation on crop response to selenium fertilisation. Plant and Soil. 332:31-40.
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2010.
Insect endosymbionts: manipulators of insect herbivore trophic interactions? Protoplasma. 244:25-51.
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Interring species interaction networks from species abundance data: A comparative evaluation of various statistical and machine learning methods. Ecological Informatics. 5:451-464.
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2010.
Is vegetation composition or soil chemistry the best predictor of the soil microbe community? Plant and Soil. 333:417-430.
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2010.
The metabolic and developmental roles of cartotenoid cleavage dioxygenase 4 from potato. Plant Physiology. 154:656-664.
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2010.
A methyl transferase links the circadian clock to the regulation of alternative splicing. Nature. 468:112-116.
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2010.
Modelling contact spread of infection in host-parasitoid systems: Vertical transmission of pathogens can cause chaos. Journal of Theoretical Biology. 262:441-451.
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2010.
Modelling nonstationary gene regulatory processes. Advances in Bioinformatics. :-749848.
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2010.
Modelling the effects of previous infection and re-infection on the costs of bovine viral diarrhoea outbreaks in beef herds. Veterinary Journal. 185:138-143.
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2010.
The molecular network governing nodule organogenesis and infection in the model legume Lotus japonicus. Nature Communications. 1:-10.
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2010.
Movement of newly assimilated 13C carbon in the grass Lolium perenne and its incorporation into rhizosphere microbial DNA. Rapid Communications in Mass Spectrometry. 24:535-540.
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2010.
Multi-environment QTL mapping in blackcurrant (Ribes nigrum L.) using mixed models. Theoretical and Applied Genetics. 121:1483-1488.
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2010.
Phytaspase, a relocalisable cell death promoting plant protease with caspase specificity. EMBO Journal. 29:1149-1161.
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2010.
Phytophthora infestans effector AVR3a is essential for virulence and manipulates plant immunity by stabilizing host E3 ligase CMPG1. Proceedings of the National Academy of Sciences, USA. 107:9909-9914.
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2010.
PIV as a method for quantifying root cell growth and particle displacement in confocal images. Microscopy Research and Technique. 73:27-36. Abstract
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Plant treatment, pollutant load and soil type effects in the rhizosphere ecology of trace element polluted soils. Ecotoxicology and Environmental Safety. 73:970-981. Abstract
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2010.
Planting density influence on fibrous root reinforcement of soils. Ecological Engineering. 36:276-284. Abstract
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2010.
Plants as reservoirs for human enteric pathogens (Review). CAB Reviews: Perspectives in Agriculture, Veterinary Science, Nutrition and Natural Resources. 5, 047:1-11.
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2010.
Positive plant microbial interactions. Annals of Applied Biology. 157:317-320.
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2010.
Prevalence of Pasteurella multocida and other respiratory pathogens in the nasal tract of Scottish calves. Veterinary Record. 167:555-560.
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2010.
Profiling of phenols in human faecal water after raspberry supplementation. Journal of Agricultural and Food Chemistry. 58:10389-10395.
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2010.
Re-description of Cryptosporidium cuniculus Inman and Takeuchi 1979 (Apicomplexa:Cryptosporidiidae): morphology, biology and phylogeny. International Journal for Parasitology. 40:1539-1548.
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2010.
Recent developments in effector biology of filamentous plant pathogens. Cellular Microbiology. 12:705-715.
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2010.
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2010.
Relative importance of seed-tuber and soilborne inoculum in causing black dot disease of potato. Plant Pathology. 59:693-702.
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2010.
Relative quantitative kinetics of interferon-gamma and interleukin-10 mRNA and protein production by activated ovine peripheral blood mononuclear cells. Veterinary Immunology and Immunopathology. 136:34-42.
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2010.
Resilience of microorganisms and aggregation of a sandy calcareous soil to amendment with organic and synthetic fertilizer. Soil Use and Management. 26:149-157.
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2010.
Resistance of simple plant root systems to uplift loads. Canadian Geotechnical Journal. 47:78-95. Abstract
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2010.
The response of organic matter mineralisation to nutrient and substrate additions in subarctic soils. Soil Biology & Biochemistry. 42:92-100.
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2010.
Rowanberry phenolics: compositional analysis and bioactivites. Journal of Agricultural and Food Chemistry. 58:11985-11992.
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2010.
The Sanger FASTQ file format for sequences with quality scores, and the Solexa/Illumina FASTQ variants. Nucleic Acids Research. 38:1767-1771.
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Shoot zinc (Zn) concentration varies widely within Brassica oleracea L. and is affected by soil Zn and phosphorus (P) levels. Journal of Horticultural Science & Biotechnology. 85:375-380.
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The Spen family protein FPA controls alternative cleavage and polyadenylation of RNA. Developmental Cell. 18:203-213.
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2010.