Publications list

Found 868 results

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2010

Hedley PE, Russell JR, Jorgensen L, Gordon S, Morris JA, Hackett CA, Cardle L, Brennan RM. 2010. Candidate genes associated with bud dormancy release in blackcurrant (Ribes nigrum L.). BMC Plant Biology. 10:-202.

Mitchell C, Johnson SN, Gordon SC, Birch ANE, Hubbard SF. 2010. Combining plant resistance and a natural enemy to control Amphorophora idaei. BioControl. 55:321-327.

Martinussen I, Uleberg E, McDougall GJ, Stewart D, Juntilla O. 2010. Development and quality of cloudberry (Rubus chamaemorus L) as affected by female parent, male parent and temperature. Journal of Berry Research. 1:91-101.

Phillips D, Nibau C, Ramsay L, Waugh R, Jenkins G. 2010. Development of a molecular cytogenetic recombination assay for barley. Cytogenetic and Genome Research. 129:154-161.

Moloney C, Griffin D, Jones PW, Bryan GJ, McLean K, Bradshaw JE, Milbourne D. 2010. Development of diagnostic markers for use in breeding potatoes resistance to Globodera pallida pathotype Pa2/3 using germplasm derived from Solanum tuberosum ssp. andigena CPC 2802. Theoretical and Applied Genetics. 120:679-689.

Dagleish MP, Hamilton S, Gonz L, Eaton SL, Steele PJ, Finlayson J, Sis S, Pang YP, Sales J, Chianini F et al.. 2010. Digestion and transportation of bovine spongiform encephalopathy-derived prion protein in the sheep intestine. Journal of General Virology. 91:3116-3123.

McDougall GJ, Dobson P, Jordan-Mahy N. 2010. Effect of different cooking regimes on rhubarb polyphenols. Food Chemistry. 119:758-764.

Vysotskaya LB, Hedley PE, Sharipova G, Veselov D, Kudoyarova G, Morris JA, Jones HG. 2010. Effect of salinity on water relations of wild barley plants differing in salt tolerance. AoB Plants. :-plq006.

Johnson SN, Gregory PJ, McNicol JW, Oodally Y, Zhang XX, Murray PJ. 2010. Effects of soil conditions and drought on egg hatching and larval survival of the clover root weevil (Sitona lepidus). Applied Soil Ecology. 44:75-79.

Johnson SN, McNicol JW. 2010. Elevated CO2 and aboveground-belowground herbivory by the clover root weevil. Oecologia. 162:209-216.

Casa R, Baret F, Buis S, Lopez-Lozano R, Pascucci S, Palombo A, Jones HG. 2010. Estimation of maize canopy properties from remote sensing by inversion of 1-D and 4-D models. Precision Agriculture. 11:319-334.

Fyfe CL, Stewart J, Murison SD, Jackson DM, Rance K, Speakman JR, Horgan GW, Johnstone AM. 2010. Evaluating energy intake measurement in free-living subjects: when to record and for how long? Public Health Nutrition. 13:172-180.

Druka A, Potokina E, Luo ZW, Jiang N, Chen XW, Kearsey MJ, Waugh R. 2010. Expression quantitative trait loci analysis in plants. Plant Biotechnology Journal. 8:10-27.

Jing RC, Vershinin AV, Grzebyta J, Shaw P, Smykal P, Marshall DF, Ambrose MJ, Ellis THN, Flavell AJ. 2010. The genetic diversity and evolution of field pea (Pisum) studied by high throughput retrotransposon based insertion polymorphism (RBIP) marker analysis. BMC Evolutionary Biology. 10:-44.

De Maayer P, Chan WY, Venter SN, Toth IK, Birch PRJ, Joubert F, Coutinho TA. 2010. Genome sequence of Pantoea ananatis LMG20103, the causative agent of Eucalyptus blight and dieback. Journal of Bacteriology. 192:2936-2937.

Richards S, Gibbs RA, Gerardo NM, Moran N, Nakabachi A, Stern D, Tagu D, Wilson ACC, Muzny D, Kovar C et al.. 2010. Genome sequence of the pea aphid Acyrthosiphon pisum. PLOS Biology. 8:-e1000313.

Grant OM, Tronina L, Ramalho JC, Besson CK, Lobo-Do-Vale R, Pereira JS, Jones HG, Chaves MM. 2010. The impact of drought on leaf physiology of Quercus suber L. trees: comparison of an extreme drought event with chronic rainfall reduction. Journal of Experimental Botany. 61:4361-4371.

Bek AS, Sauer J, Thygesen MB, Duus JO, Petersen BO, Thirup S, James EK, Jensen KJ, Stougaard J, Radutoiu S. 2010. Improved characterisation of nod factors and genetically based variation in LysM receptor domains identify amino acids expendable for nod factor recognition in Lotus spp.. Molecular Plant-Microbe Interactions. 23:58-66.

Raczynska KD, Simpson CG, Ciesiolka A, Szewc L, Lewandowska D, McNicol JW, Szweykowska-Kulinska Z, Brown JWS, Jarmolowski A. 2010. Involvement of the nuclear cap-binding protein complex in alternative splicing in Arabidopsis thaliana.. Nucleic Acids Research. 38:265-278.

Dixon ER, Blackwell MSA, Dhanoa MS, Berryman Z, de la Fuente Martinez N, Junquera D, Martinez A, Murray PJ, Kemp HF, Meier-Augenstein W et al.. 2010. Measurement at the field scale of soil . Rapid Communications in Mass Spectrometry. 24:511-518.

Renberg L, Johansson AI, Shutova T, Stenlund H, Aksmann A, Raven JA, Gardestrom P, Moritz T, Samuelsson G. 2010. A metabolomic approach to study major metabolite changes during acclimation to limiting CO2 in Chlamydomonas reinhardtii. Plant Physiology. 154:187-196.

Madsen LH, Tirichine L, Jurkiewicz A, Sullivan JT, Heckmann AB, Bek AS, Ronson CW, James EK, Stougaard J. 2010. The molecular network governing nodule organogenesis and infection in the model legume Lotus japonicus. Nature Communications. 1:-10.

Hackett CA, Russell JR, Jorgensen L, Gordon SL, Brennan RM. 2010. Multi-environment QTL mapping in blackcurrant (Ribes nigrum L.) using mixed models. Theoretical and Applied Genetics. 121:1483-1488.

Jamar C, Loffet F, Frettinger P, Ramsay L, Fauconnier ML, du Jardin P. 2010. NAM-1gene polymorphism and grain protein content in Hordeum. Journal of Plant Physiology. 167:497-501.

Munns R, James RA, Sirault XRR, Furbank RT, Jones HG. 2010. New phenotyping methods for screening wheat and barley for beneficial responses to water deficit. Journal of Experimental Botany. 61:3499-3507.

Dos Reis J FB, Simon MF, Gross E, Boddey RM, Elliott GN, Neto NE, Loureiro MdeF, de Queiroz LP, Scotti MR, Chen W-M et al.. 2010. Nodulation and nitrogen fixation by Mimosa spp. in the Cerrado and Caatinga biomes of Brazil. New Phytologist. 186:934-946.

Johnson SN, Petitjean S, Clark KE, Mitchell C. 2010. Protected raspberry production accelerates onset of oviposition by vine weevils (Otiorhynchus sulcatus). Agricultural and Forest Entomology. 12:277-283.

Simpson CG, Manthri S, Raczynska KD, Kalyna M, Lewandowska D, Kusenda B, Maronova M, Szweykowska-Kulinska Z, Jarmolowski A, Barta A et al.. 2010. Regulation of plant gene expression by alternative splicing. Biochemical Society Transactions. 38:667-671.

Hodgson JG, Sharafi M, Jalili A, Diaz S, Montserrat-Marti G, Palmer C, Cerabolini B, Pierce S, Hamzehee B, Asri Y et al.. 2010. Stomatal vs. genome size in angiosperms: The somatic tail wagging the genomic dog? Annals of Botany. 105:573-584.

Joshi MV, Mann SG, Antelmann H, Widdick DA, Fyans JK, Chandra G, Hutchings MI, Toth IK, Hecker M, Loria R et al.. 2010. The twin arginine protein transport pathway exports multiple virulence proteins in the plant pathogen Streptomyces scabies. Molecular Microbiology. 77:252-271.

Verchot-Lubicz J, Torrance L, Solovyev AG, Morozov SY, Jackson AO, Gilmer D. 2010. Varied movement strategies employed by triple gene block encoding viruses (Review). Molecular Plant-Microbe Interactions. 23:1231-1247.

2011

Bouwman FG, de Roos B, Rubio-Aliaga I, Crosley LK, Duthie SJ, Mayer CD, Horgan GW, Polley AC, Heim C, Coort SLM et al.. 2011. 2D-electrophoresis and multiplex immunoassay proteomic analysis of different body fluids and cellular components reveal known and novel markers for extended fasting. BMC Medical Genomics. 4

Hill PW, Quilliam RS, DeLuca TH, Farrar J, Farrell M, Roberts P, Newsham KK, Hopkins DW, Bardgett RD, Jones DL. 2011. Acquisition and assimilation of nitrogen as peptide-bound and D-enantiomers of amino acids by wheat. PLoS ONE. 6:e19220.

Rosling A, Cox F, Cruz-Martinez K, Ihrmark K, Grelet GA, Lindahl BD, Menkis A, James TY. 2011. Archaeorhizomycetes: unearthing an ancient class of ubiquitous soil fungi. Science. 333:876-879.

Mitchell C, Brennan RM, Cross JV, Johnson SN. 2011. Arthropod pests of currant and gooseberry crops in the UK: their biology, management and future prospects. Agricultural and Forest Entomology. 13:221-237.

McDougall GJ, Martinussen I, Junttila O, Verrall SR, Stewart D. 2011. Assessing the influence of genotype and temperature on polyphenol composition in cloudberry (Rubus chamaemorus L) using a novel mass spectrometric method. Journal of Agricultural and Food Chemistry. 59:10860-10868.

Jeong GY, Hillier S, Kemp RA. 2011. Changes in mineralogy of loess-paleosol sections across the Chinese Loess Plateau. Quaternary Research. 75:245-255.

Dawson IK, Vinceti B, Weber JC, Neufeldt H, Russell JR, Lengkeek AG, Kalinganire A, Kindt R, Lilles JPB, Roshetko J et al.. 2011. Climate change and tree genetic resource management: maintaining and enhancing the productivity and value of smallholder tropical agroforestry landscapes (Review). Agroforestry Systems. 81:67-78.

Francez AJ, Pinay G, Josselin N, Williams BL. 2011. Denitrification triggered by nitrogen addition in Sphagnum magellanicum peat. Biogeochemistry. 106:435-441.

Aitkenhead MJ, Albanito F, Jones MB, Black HIJ. 2011. Development and testing of a process-based soil model (MOSES) for ecosystem services. Ecological Modelling. 222:3795-3810.

Woinarski JCZ, Legge S, Fitzsimons JA, Traill BJ, Burbidge AA, Fisher A, Firth RSC, Gordon IJ, Griffiths AD, Johnson C et al.. 2011. The disappearing mammal fauna of northern Australia: context, cause, and response. Conservation Letters. 4:192-201.

Clark KE, Hartley SE, Johnson SN. 2011. Does mother know best? The preference-performance hypothesis and parent-offspring conflict in aboveground-belowground herbivore life cycles Ecological Entomology. 36:117-124.

Walker AW, Ince J, Duncan SH, Webster L, Holtrop G, Ze X, Brown DS, Stares MD, Scott P, Bergerat A et al.. 2011. Dominant and diet-responsive groups of bacteria within the human colonic microbiota. International Society for Microbial Ecology (ISME) Journal. 5:220-230.

Johnson D, Vachon J, Britton AJ, Helliwell RC. 2011. Drought alters carbon fluxes in alpine snowbed ecosystems through contrasting impacts on graminoids and forbs. New Phytologist. 190:740-749.

Jones E, Webb SD, Ruiz-Fons JF, Albon S, Gilbert L. 2011. The effect of landscape heterogeneity and host movement on a tick-borne pathogen. Theoretical Ecology. 4:435-448.

Jayakody S, Sibbald AM, Mayes RW, Hooper RJ, Gordon IJ, Lambin X. 2011. Effects of human disturbance on the diet composition of wild red deer Cervus elaphus. European Journal of Wildlife Research. 57:939-948.

Johnson SN, Barton AT, Clark KE, Gregory PJ, McMenemy LS, Hancock RD. 2011. Elevated atmospheric carbon dioxide impairs the performance of root-feeding vine weevils by modifying root growth and secondary metabolites. Global Change Biology. 17:688-695.

McIntosh BS, Ascough, J. C. II, Twery M, Chew J, Elmahdi A, Haase D, Harou JJ, Hepting D, Cuddy S, Jakeman AJ et al.. 2011. Environmental decision support systems (EDSS) development - challenges and best practices. Environmental Modelling and Software. 26:1389-1402.

Flower K, Thomas D, Heather J, Ramasubramanyan S, Jones S, Sinclair AJ. 2011. Epigenetic control of viral life-cycle by a DNA-methylation dependent transcription factor. PLoS ONE. 6:e29522.

Martin P, Johnson SN. 2011. Evidence that elevated CO2 reduces resistance to the European large raspberry aphid in some raspberry cultivars. Journal of Applied Entomology. 135:237-240.

Asensio AC, Marino D, James EK, Ariz I, Arrese-Igor C, Aparicio-Tejo PM, Arredondo-Peter RJ, Moran JF. 2011. Expression and localization of a Rhizobium-derived cambialistic superoxide dismutase in pea (Pisum sativum) nodules subjected to oxidative stress. Molecular Plant-Microbe Interactions. 24:1247-1257.

Currey PA, Johnson D, Dawson LA, van der Wal R, Thornton B, Sheppard LJ, Leith ID, Artz RRE. 2011. Five years of simulated atmospheric nitrogen deposition have only subtle effects on the fate of newly synthesized carbon in Calluna vulgaris and Eriophorum vaginatum. Soil Biology and Biochemistry. 43:495-502.

McGeoch SC, Holtrop G, Fyfe C, Lobley GE, Pearson DW, Abraham P, Megson IL, MacRury SM, Johnstone AM. 2011. Food intake and dietary glycaemic index in free-living adults with and without type 2 diabetes melitus. Nutrients. 3:683-693.

Martin-Sanz A, Caminero C, Jing R, Flavell AJ, de la Vega MP. 2011. Genetic diversity among Spanish pea (Pisum sativum L.) landraces, pea cultivars and the world Pisum sp. core collection assessed by retrotransposon-based insertion polymorphisms (RBIPs). Spanish Journal of Agricultural Research. 9:166-178.

Russell WR, Gratz SW, Duncan SH, Holtrop G, Ince J, Scobbie L, Duncan G, Johnstone AM, Lobley GE, Wallace RJ et al.. 2011. High-protein, reduced-carbohydrate weight-loss diets promote metabolite profiles likely to be detrimental to colonic health. American Journal of Clinical Nutrition. 93:1062-1072.

Haegeman A, Jones JT, Danchin EGJ. 2011. Horizontal gene transfer in nematodes: a catalyst for plant parasitism? Molecular Plant-Microbe Interactions. 24:879-887.

de Boer JM, Borm TJA, Jesse T, Brugmans B, Tang XM, Bryan GJ, Bakker J, van EHJ, Visser RGF. 2011. A hybrid BAC physical map of potato: a framework for sequencing a heterozygous genome. BMC Genomics. 12:ArticleNo.594..

Russell JR, Bayer MM, Booth C, Cardle L, Hackett CA, Hedley PE, Jorgensen L, Morris JA, Brennan RM. 2011. Identification, utilisation and mapping of novel transcriptome-based markers from blackcurrant (Ribes nigrum). BMC Plant Biology. 11:147.

Lye GC, Jennings SN, Osborne JL, Goulson D. 2011. Impacts of the use of nonnative commercial bumble bees for pollinator supplementation in raspberry. Journal of Economic Entomology. 104:107-114.

Newton AC, Johnson SN, Gregory PJ. 2011. Implications of climate change for diseases, crop yields and food security. Euphytica. 179:3-18.

James MC, Furness RW, Bowman AS, Forbes KJ, Gilbert L. 2011. The importance of passerine birds as tick hosts and in the transmission of Borrelia burgdorferi, the agent of Lyme disease: a case study from Scotland. Ibis. 153:293-302.

Brennan RM, Russell JR, Jorgensen L, Abreu IN, Jarret D, Gordon S, Hackett CA. 2011. Improving breeding efficiency in blackcurrant - the application of new selection techniques in Ribes. Acta Horticulturae. 946:157-160.

Tordoff GM, Chamberlain PM, Crowther TW, Black HIJ, Jones TH, Stott A, Boddy L. 2011. Invertebrate grazing affects nitrogen partitioning in the saprotrophic fungus Phanerochaete velutina. Soil Biology and Biochemstry. 43:2338-2346.

Gyaneshwar P, Hirsch AM, Moulin L, Chen WM, Elliott GN, Bontemps C, Estrada-de los Santos P, Gross E, dos Reis J, F.B et al.. 2011. Legume-nodulating betaproteobacteria: diversity, host range, and future prospects. Molecular Plant-Microbe Interactions. 24:1276-1288.

Hooftman DAP, Flavell AJ, Jansen H, den Nijs HCN, Syed NH, Sorensen AP, Wengel PO, van de Wiel C. 2011. Locus-dependent selection in crop-wild hybrids of lettuce under field conditions and its implication for GM crop development. Evolutionary Applications. 4:648-659.

van Doorn WG, Beers EP, Dangl JL, Franklin-Tong VE, Gallois P, Hara-Nishimura I, Jones AM, Kawai-Yamada M, Lam E, Mundy J et al.. 2011. Morphological clasification of plant cell deaths. Cell Death and Differentiation. 18:1241-1246.

Andrews M, James EK, Sprent JI, Boddey RM, Gross E, Dos Reis Junior FB. 2011. Nitrogen fixation in legumes and actinorhizal plants in natural ecosystems: values obtained using N-15 natural abundance. Plant Ecology and Diversity. 4:131-140.

Torres GA, Gong Z, Iovene M, Hirsch C, Buell CR, Bryan GJ, Novak P, Macas J, Jiang J. 2011. Organization and evolution of subtelomeric satellite repeats in the potato genome. Genes Genomes Genetics. 1:85-92.

Yan X, De Clercq P, Han R, Jones JT, Chen S, Moens M. 2011. Osmotic responses of different strains of Steinernema carpocapsae. Nematology. 13:845-851.

Bjorkman M, Klingen I, Birch ANE, Bones AM, Bruce T, Johansen T, Meadow R, Molmann J, Selijasen R, Smart L et al.. 2011. Phytochemicals of Brassicaceae in plant protection and human health - influences of climate, environment and agronomic practice. Phytochemistry. 72:538-556.

Johnson SN, Staley JT, McLeod FAL, Hartley SE. 2011. Plant-mediated effects of soil invertebrates and summer drought on above-ground multitrophic interactions. Journal of Ecology. 99:57-65.

Veronico P, Melillo MT, Saponaro C, Leonetti P, Picardi E, Jones JT. 2011. A polygalacturonase-inhibiting protein with a role in pea defence against the cyst nematode Heterodera goettingianna. Molecular Plant Pathology. 12:275-287.

Ross HA, Wright KM, McDougall GJ, Roberts AG, Chapman SN, Morris WL, Hancock RD, Stewart D, Tucker GA, James EK et al.. 2011. Potato tuber pectin structure is influenced by pectin methyl esterase activity and impacts on cooked potato texture. Journal of Experimental Botany. 62:371-381.

Coyle DR, Clark KE, Raffa KF, Johnson SN. 2011. Prior host feeding experience influences ovipositional but not feeding preference in a polyphagous insect herbivore. Entomologia Experimentalis et Applicata. 138:137-145.

Vinuela-Fernandez I, Jones E, McKendrick IJ, Molony V. 2011. Quantitative assessment of increased sensitivity of chronic laminitic horses to hoof tester evoked pain. Equine Veterinary Journal. 43:62-68.

Crawfurd KJ, Raven JA, Wheeler GL, Baxter EJ, Joint I. 2011. The response of Thalassiosira pseudonana to long-term exposure to increased CO2 and decreased pH. PLoS ONE. 6:e26995.

Jiang N, Wang MH, Jia TY, Wang L, Leach L, Hackett CA, Marshall DF, Luo ZW. 2011. A robust statistical method for association-based eQTL analysis. PLoS ONE. 6:e23192.

Squire GR, Breckling B, Pfeilstetter AD, Jorgensen RB, Lecomte J, Pivard S, Reuter H, Young MW. 2011. Status of feral oilseed rape in Europe: its minor role as a GM impurity and its potential as a reservoir of transgene persistence. Environmental Science and Pollution Research. 18:111-115.

Alexandrov GA, Ames D, Aumann C, Bellocchi G, Bruen M, Crout N, Erechtchoukova M, Hildebrandt A, Hoffman F, Jackisch C et al.. 2011. Technical assessment and evaluation of environmental models and software: Letter to the Editor. Environmental Modelling and Software. 26:328-336.

Tolkamp BJ, Allcroft DJ, Barrio JP, Bley TAG, Howie JA, Jacobsen TB, Morgan CA, Schweitzer DPN, Wilkinson S, Yeates MP et al.. 2011. The temporal structure of feeding behaviour. American Journal of Physiology - Regulatory, Integrative and Comparative Physiology. 301:R378-R393.

Jacobs AAA, Scheper JA, Benvenutti MA, Gordon IJ, Poppi DP, Elgersma A. 2011. Tensile fracture properties of seven tropical grass species at different phenological stages. Grass and Forage Science. 66:551-559.

Graham J, Hackett CA, Smith K, Woodhead M, MacKenzie K, Tierney I, Cooke DEL, Bayer MM, Jennings N. 2011. Towards an understanding of the nature of resistance to Phytophthora root rot in red raspberry. Theoretical and Applied Genetics. 123:585-601.

Quilliam R, Williams AP, Avery L, Malham S, Jones D. 2011. Unearthing human pathogens at the agricultural-environment interface: A review of current methods for the detection of Escherichia coli O157 in freshwater ecosystems. Agriculture, Ecosystems and Environment. 140:354-360.

Hill PW, Farrar J, Roberts P, Farrell M, Grant H, Newsham KK, Hopkins DW, Bardgett RD, Jones DL. 2011. Vascular plant success in a warming Antarctic may be due to efficient nitrogen acquisition. Nature Climate Change. 1:50-53.

2012

Johnson SN, Clark KE, Hartley SE, Jones TH, McKenzie SW, Koricheva J. 2012. Aboveground-belowground herbivore interactions: a meta-analysis. Ecology. 93:2208-2215.

James A, Syed NH, Bordage S, Marshall J, Nimmo GA, Jenkins GI, Herzyk P, Brown JWS, Nimmo HG. 2012. Alternative splicing mediates responses of the Arabidopsis thaliana circadian clock to temperature changes. The Plant Cell. 24:961-981.

Vinten AJA, Martin-Ortega J, Glenk K, Booth P, Balana BB, MacLeod M, Lago M, Moran D, Jones M. 2012. Application of the WFD cost proportionality principle to diffuse pollution mitigation: a case study for Scottish Lochs. Journal of Environmental Management. 97:28-37.

Jordan MO, Wendler R, Millard P. 2012. Autumnal N storage determines the spring growth, N uptake and N internal cycling of young peach trees. Trees - Structure and Function. 26:393-404.

Chen WM, Prell J, James EK, Sheu D, Sheu S. 2012. Biosynthesis of branched-chain amino acids is essential for effective symbioses between betarhizobia and Mimosa pudica. Microbiology. 158:1758-1766.

Liu XY, Wei S, Wang F, James EK, Zagar C, Wang YP, Dong X, Hui T, Xia LG. 2012. Burkholderia and Cupriavidus spp. are the preferred symbionts of Mimosa spp. in Southern China. FEMS Microbiology Ecology. 80:417-426.

Sheu SY, Chou JH, Bontemps C, Elliott GN, Gross E, James EK, Sprent JI, Young JPW, Chen WM. 2012. Burkholderia symbiotica sp. Nov., isolated from root nodules of Mimosa spp. native to North East Brazil. International Journal of Systematic and Evolutionary Microbiology. 62:2272-2278.

Logie L, Harthill J, Patel K, Bacon S, Hamilton DL, Macrae K, McDougall GJ, Wang HH, Xue L, Jiang H et al.. 2012. Cellular responses to the metal-binding properties of metformin. Diabetes. 61:1423-1433.

Suarez-Moreno ZR, Caballero-Mellado J, Coutinho BG, Mendonca-Previato L, James EK, Venturi V. 2012. Common features of environmental and potentially beneficial plant-associated Burkholderia. Microbial Ecology. 63:249-266.

Palomares-Rius JE, Hedley PE, Cock PJA, Morris JA, Jones JT, Vovlas N, Blok V. 2012. Comparison of transcript profiles in different life stages of the nematode Globodera pallida under different host potato genotypes. Molecular Plant Pathology. 13:1120-1134.

Jackson-Blake LA, Helliwell RC, Britton A, Gibbs S, Coull MC, Dawson LA. 2012. Controls on soil solution nitrogen along an altitudinal gradient in the Scottish uplands. Science of the Total Environment. 431:100-108.

Birch PRJ, Bryan GJ, Fenton B, Gilroy EM, Hein I, Jones JT, Prashar A, Taylor MA, Torrance L, Toth IK. 2012. Crops that feed the world 8: potato: are the trends of increased global production sustainable? Food Security. 4:477-508.

Deffuant G, Alvarez I, Barreteau O, de Vries B, Edmonds B, Gilbert N, Gotts N, Jabot F, Janssen S, Hilden M et al.. 2012. Data and models for exploring sustainability of human well-being in global environmental change. European Physical Journal Special Topics.. 214:519-545.

Deflorio G, Horgan GW, Jaspars M, Woodward S. 2012. Defence response of Sitka spruce before and after inoculation with Heterobasidion annosum: 1H NMR fingerprinting of bark and sapwood metabolites. Analytical and Bioanalytical Chemistry. 402:3333-3344.

McCallum S, Woodhead M, Jorgensen L, Gordon SL, Brennan RM, Graham J, Hackett CA, Rowland LJ, Hancock JF, Olmstead JW et al.. 2012. Developing tools for long term breeding of blueberry germplasm for UK production. International Journal of Fruit Science. 12:294-303.

Holtrop G, Johnstone AM, Fyfe C, Gratz SW. 2012. Diet composition is associated with endogenous formation of n-nitroso compounds in obese men. Journal of Nutrition. 142:1652-1658.

Pilot M, Jedrzejewski W, Sidorovich VE, Meier-Augenstein W, Kemp HF, Hoelzel AR. 2012. Dietary differentiation and the evolution of population genetic structure in a highly mobile carnivore. PLoS ONE. 7:e39341.

Broadley MR, Chilimba ADC, Joy EJM, Young SD, Black CR, Ander EL, Watts MJ, Hurst R, Fairweather-Tait SJ, White PJ et al.. 2012. Dietary requirements for magnesium but not calcium are likely to be met in Malawi based on national food supply data. International Journal for Vitamin and Nutrition Research. 82:192-199.

Lockyer AE, Emery AM, Kane RA, Walker AJ, Mayer CD, Mitta G, Coustau C, Adema CM, Hanelt B, Rollinson D et al.. 2012. Early differential gene expression in haemocytes from resistant and susceptible biomphalaria glabrata strains in response to schistosoma mansoni. PLoS ONE, e511020. 7

Weber N, Halpin C, Hannah LC, Jez JM, Kough J, Parrott W. 2012. Editor's Choice: crop genome plasticity and its relevance to food and feed safety of genetically engineered breeding stacks. Plant Physiology. 160:1842-1853.

Chen W, Prell J, James EK, Sheu D, Sheu S. 2012. Effect of phosphoglycerate mutase and fructose 1,6-bisphosphatase deficiency on free-living and symbiotic Burkholderia phymatum. Microbiology-SGM. 158:1127-1136.

Clark KE, Hartley SE, Brennan RM, Jennings SN, McMenemy LS, McNicol JW, Mitchell C, Johnson SN. 2012. Effects of cultivar and egg density on a colonizing vine weevil (Otiorhynchus sulcatus) population and its impacts on red raspberry growth and yield. Crop Protection. 32:76-82.

Adriaens ME, Jaillard M, Eijssen LMT, Mayer C, Evelo CTA. 2012. An evaluation of two-channel ChIP-on-chip and DNA methylation microarray normalization strategies. BMC Genomics. 13:42-42.

Vetukuri RR, Asman AKM, Tellgren-Roth C, Jahan SN, Reimegard J, Fogelqvist J, Savenkov E, Soderbom F, Avrova AO, Whisson SC et al.. 2012. Evidence for small RNAs homologous to effector-encoding genes and transposable elements in the oomycete Phytophthora infestans. PLoS One.. 7:e51399-e51399.

Awofala AA, Davies JA, Jones S. 2012. Functional roles for redox genes in ethanol sensitivity in Drosophila. Functional and Integrative Genomics. 12:305-315.

Haegeman A, Mantelin S, Jones JT, Gheysen G. 2012. Functional roles of effectors of plant-parasitic nematodes. Gene. 492:19-31.

Farre A, Cuadrado A, Lacasa-Benito I, Cistue L, Schubert I, Comadran J, Jansen J, Romagosa I. 2012. Genetic characterization of a reciprocal translocation present in a widely grown barley variety. Molecular Breeding. 30:1109-1119.

Jing R, Ambrose MA, Knox MR, Smykal P, Hybl M, Ramos A, Caminero C, Burstin J, Duc G, van Soest LJM et al.. 2012. Genetic diversity in European Pisum germplasm collections. Theoretical and Applied Genetics. 125:367-380.

Wang M, Jiang N, Jia T, Leach L, Cockram J, Waugh R, Ramsay L, Thomas WTB, Luo Z. 2012. Genome-wide association mapping of agronomic and morphologic traits in highly structured populations of barley cultivars. Theoretical and Applied Genetics. 124:233-246.

Jones HG. 2012. How do rootstocks control shoot water relations? New Phytologist. 194:301-303.

Jupe F, Pritchard L, Etherington G, MacKenzie K, Cock PJA, Wright F, Sharma SK, Bolser D, Bryan GJ, Jones J et al.. 2012. Identification and localisation of the NB-LRR gene family within the potato genome. BMC Genomics. 13:1-14.

Phoenix GK, Emmett BBAAJ, Caporn SJM, Dise NB, Helliwell RC, Jones L, Leake JR, Leith ID, Sheppard LJ, Sowerby A et al.. 2012. Impacts of atmospheric nitrogen deposition: responses of multiple plant and soil parameters across contrasting ecosystems in long-term field experiments. Global Change Biology. 18:1197-1215.

O'Gorman EJ, Pichler DE, Adams G, Benstead JP, Cohen H, Craig N, Cross WF, Demars BOL, Friberg N, Gisalon GM et al.. 2012. Impacts of warming on the structure and functioning of aquatic communities: individual- to ecosystem-level responses. Chapter 2. Advances in Ecological Research. 47:81-176.

Clark KE, Hartley SE, Brennan RM, MacKenzie K, Johnson SN. 2012. Investigating preference-performance relationships in aboveground-belowground life cycles: a laboratory and field study with the vine weevil (Otiorhynchus sulcatus). Bulletin of Entomological Research. 102:63-70.

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2013

Jones CI, Grima DP, Waldron JA, Jones S, Parker HN, Newbury SF. 2013. The 5 '-3 ' exoribonuclease Pacman (Xrn1) regulates expression of the heat shock protein Hsp67Bc and the microRNA miR-277-3p in Drosophila wing imaginal discs. RNA Biology. 10:1345-1355.

Palomares-Rius JE, Jones JT, Cock PJ, Castillo P, Blok VC. 2013. Activation of hatching in diapaused and quiescent Globodera pallida. Parasitology. 140:445-454.

Pettorelli N, Evans DM, Garner TWJ, Katzner T, Gompper ME, Altwegg R, Branch TA, Johnson JA, Acevedo-Whitehouse K, DaVolls L et al.. 2013. Addressing gender imbalances in animal conservation. Animal Conservation. 16:131-133.

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Chen MH, Sheu SY, James EK, Young CC, Chen WM. 2013. Azoarcus olearius sp.nov., a nitrogen-fixing bacterium isolated from oil-contaminated soil. International Journal of Systematic and Evolutionary Microbiology. 63:3755-3761.

Sheu SY, Chou JH, Bontemps C, Elliott GN, Gross E, dos Reis Jr FB, Melkonian RJ, Moulin L, James EK, Sprent JI et al.. 2013. Burkholderia diazotrophica sp. nov., isolated from root nodules of Mimosa spp. International Journal of Systematic and Applied Microbiology. 63:435-441.

Bournaud C, de Faria S, Santos JMF, Tisseyre P, Silva M, Chaintreuil C, Gross E, James EK, Prin Y, Moulin L. 2013. Burkholderia species are the most common and preferred nodulating symbionts of the Piptadenia group (Tribe Mimoseae). PLoS ONE. 8:e63478.

Dietrich RC, Bengough AG, Jones HG, White PJ. 2013. Can root electrical capacitance be used to predict root mass in soil? Annals of Botany. 112:457-464.

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Kenyon F, McBean D, Greer AW, Burgess CGS, Morrison AA, Bartley DJ, Bartley Y, Devin L, Nath M, Jackson F. 2013. A comparative study of the effects of four treatment regimes on ivermectin efficacy, body weight and pasture contamination in lambs naturally infected with gastrointestinal nematodes in Scotland. International Journal for Parasitology - Drugs and Drug Resistance. 3:77-84.

Whitehead PG, Crossman J, Balana BB, Futter MN, Comber S, Jin L, Skuras D, Wade AJ, Bowes MJ, Read DS. 2013. A cost-effectiveness analysis of water security and water quality: impacts of climate and land-use change on the River Thames system. Philosophical Transactions of the Royal Society, Series A. 371:201204B.

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Li Y, Cooke DEL, Jacobsen E, Van der Lee T. 2013. Efficient multiplex simple sequence repeat genotyping of the oomycete plant pathogen Phytophthora infestans. Journal of Microbiological Methods. 92:316-322.

James MC, Bowman AS, Forbes KJ, Lewis F, McLeod JE, Gilbert L. 2013. Environmental determinants of Ixodes ricinus ticks and the incidence of Borrelia burgdorferi sensu lato, the agent of Lyme borreliosis, in Scotland. Parasitology. 140:237-246.

Cornulier T, Yoccoz NG, Bretagnolle V, Brommer JE, Butet A, Ecke F, Elston DA, Framstad E, Henttonen H, Hornfeldt B et al.. 2013. Europe-wide dampening of population cycles in keystone herbivores. Science. 340:63-66.

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Josuttis M, Verrall S, Stewart D, Kruger E, McDougall GJ. 2013. Genetic and environmental effects on tannin composition in strawberry (Fragaria x ananassa) cultivars grown in different European locations. Journal of Agricultural and Food Chemistry. 61:790-800.

Alimi NA, Bink MCAM, Dieleman JA, Nicolai M, Wubs M, Heuvelink E, Magan J, Voorrips RE, Jansen J, Rodrigues PC et al.. 2013. Genetic and QTL analyses of yield and a set of physiological traits in pepper. Euphytica. 190:181-201.

Yannic G, Pellissier L, Ortego J, Lecomte N, Couturier S, Cuyler C, Dussault C, Hundertmark KJ, Irvine RJ, Jenkins DA et al.. 2013. Genetic diversity in caribou linked to past and future climate change. Nature Climate Change. 4:132-137.

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Carsan S, Stroebel A, Dawson I, Kindt R, Swanepoel F, Jamnadass R. 2013. Implications of shifts in coffee production on tree species richness, composition and structure on small farms around Mount Kenya. Biodiversity and Conservation. 22:2919-2936.

NicDaeid NN, Jayamana S, Kerr WJ, Meier-Augenstein W, Kemp HF. 2013. Influence of precursor solvent extraction on stable isotope signatures of methylamphetamine prepared from over-the-counter medicines using the Moscow and hypophosphorous routes. Analytical and Bioanalytical Chemistry. 405:2931-2941.

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Crossman J, Whitehead P, Futter MN, Jin L, Shahgedanova M, Castellazzi M, Wade AJ. 2013. The interactive responses of water quality and hydrology to changes in multiple stressors, and implications for the long-term effective management of phosphorus. Science of the Total Environment. 454:230-244.

Gehlot HS, Tak N, Kaushik M, Mitra S, Chen WM, Poweleit N, Panwar D, Poonar N, Parihar R, Tak A et al.. 2013. An invasive Mimosa in India does not adopt the symbionts of its native relatives. Annals of Botany. 112:179-186.

Fazey I, Evely AC, Reed MR, Stringer LC, Kruijsen JHJ, White PCL, Newsham A, Jin L, Cortazzi M, Phillipson J et al.. 2013. Knowledge Exchange: a review and research agenda for environmental management. Environmental Conservation. 40:19-36.

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Mantelin S, Bhattarai KK, Jhavei TZ, Kaloshian I. 2013. Mi-1-mediated resistance to Meloidogyne incognita in tomato may not rely on ethylene but hormone perception through ETR3 participates in limiting nematode infection in a susceptible host. PLoS ONE. 8:e63281.

Smith SW, Robertson AHJ, Meharg AA, Pakeman RJ, Johnson D, Woodin SJ, van der Wal R. 2013. Milling plant and soil material in plastic tubes over-estimates carbon and under-estimates nitrogen concentrations. Plant and Soil. 369:509-513.

Nechwatal J, Bakonyi J, Cacciola SO, Cooke DEL, Jung T, Nagy ZA, Vannini A, Vettraino AM, Brasier CM. 2013. The morphology, behaviour and molecular phylogeny of Phytophthora taxon Salixsoil and its redesignation as Phytophthora lacustris sp nov. Plant Pathology. 62:355-369.

Macleod CJA, Humphreys MW, Whalley WR, Turner L, Binley A, Watts CW, Skot L, Joynes A, Hawkins S, King IP et al.. 2013. A novel grass hybrid to reduce flood generation in temperate regions. Nature Scientific Reports, 3, Article no.1683..

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Arnold MFF, Haag AF, Capewell S, Boshoff HI, James EK, McDonald R, Mair I, Mitchell AM, Kerscher B, Mitchell TJ et al.. 2013. Partial complementation of Sinorhizobium meliloti bacA mutant phenotypes by the Mycobacterium tuberculosis BacA protein. Journal of Bacteriology. 195:389-398.

Chianini F, Siso S, Ricci E, Eaton SL, Finlayson J, Pang Y, Hamilton S, Steele P, Reid HW, Cantile C et al.. 2013. Pathogenesis of scrapie in ARQ/ARQ sheep after subcutaneous infection: Effect of lymphadenectomy and immune cell subset changes in relation to prion protein accumulation. Veterinary Immunology and Immunopathology. 152:348-358.

Vetukuri RR, Asman AKM, Jahan SN, Avrova AO, Whisson SC, Dixelius C. 2013. Phenotypic diversification by gene silencing in Phytophthora plant pathogens. Communicative and Integrative Biology. 6:e25890.

Jupe J, Stam R, Howden AJM, Morris JA, Zhang R, Hedley PE, Huitema E. 2013. Phytophthora capsici-tomato interaction features dramatic shifts in gene expression associated with a hemi-biotrophic lifestyle. Genome Biology. 14:R63.

Sainz M, Perez-Rontome C, Ramos J, Mulet J, James E, Bhattacharjee U, Petrich J, Becana M. 2013. Plant hemoglobins can be maintained in functional form by reduced flavins in the nuclei and confer differential tolerance to nitro-oxidative stress. The Plant Journal. 76:875-887.

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Aslam TJ, Johnson SN, Karley AJ. 2013. Plant-mediated effects of drought on aphid population structure and parasitoid attack rates. Journal of Applied Entomology. 137:136-145.