Publications list

Found 868 results

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2013

Dahlawi H, Jordan-Mahy N, Clench M, McDougall GJ, Le Maitre CL. 2013. Polyphenols are responsible for the pro-apoptotic properties of pemegranate juice on leukemia cell lines. Food Science & Nutrition. 1:196-208.

Czachor H, Hallett PD, Lichner L, Jozefaciuk G. 2013. Pore shape and organic compounds drive major changes in the hydrological characteristics of agricultural soils. European Journal of Soil Science. 64:334-344.

Phillips D, Wnetrzak J, Nibau C, Barakate A, Ramsay L, Wright F, Higgins JD, Perry RM, Jenkins G. 2013. Quantitative high resolution mapping of HvMLH3 foci in barley pachytene nuclei reveals a strong distal bias and weak interference. Journal of Experimental Botany. 64:2139-2154.

McGeoch SC, Johnstone AM, Lobley GE, Adamson J, Hickson K, Holtrop G, Fyfe C, Clark LF, Pearson DWM, Abraham P et al.. 2013. A randomized crossover study to assess the effect of an oat-rich diet on glycaemic control, plasma lipids and postprandial glycaemia, inflammation and oxidative stress in Type 2 diabetes. Diabetic Medicine. 30:1314-1323.

Critchley CNR, Mitchell RJ, Rose RJ, Griffiths JB, Jackson E, Scott H, Davies OD. 2013. Re-establishment of Calluna vulgaris (L.) Hull in an eight-year grazing experiment on upland acid grassland. Journal of Nature Conservation. 21:22-30.

McKenzie SW, Vanbergen AJ, Hails RS, Jones TH, Johnson SN. 2013. Reciprocal feeding facilitation between above- and below-ground herbivores. Biology Letters. 9

Jarvis S, Woodward S, Alexander IJ, Taylor AFS. 2013. Regional scale gradients of climate and nitrogen deposition drive variation in ectomycorrhizal fungal communities associated with native Scots pine. Global Change Biology. 19:1688-1696.

Coutinho BG, Mitter B, Talbi C, Sessitsch A, Bedmar E, Halliday N, James EK, Camara M, Venturi V. 2013. Regulon studies and in planta role of the BraI/R quorum-sensing system in the plant-beneficial Burkholderia cluster. Applied and Environmental Microbiology. 79:4421-4432.

Jupe F, Witek K, Verweij W, Sliwka J, Pritchard L, Etherington GJ, MacLean D, Cock PJ, Leggett RM, Bryan GJ et al.. 2013. Resistance gene enrichment sequencing (RenSeq) enables reannotation of the NB-LRR gene family from sequenced plant genomes and rapid mapping of resistance loci in segregating populations. Plant Journal. 76:530-544.

Deng WN, Iannetta PPM, Hallett PD, Toorop PE, Squire GR, Jeng DS. 2013. The rheological properties of the seed coat mucilage of Capsella bursa-pastoris L. Medik. (shepherd's purse). Biorheology. 50:57-67.

Wang MH, Wang L, Jiang N, Jia TY, Luo ZW. 2013. A robust and efficient statistical method for genetic association studies using case and control samples from multiple cohorts. BMC Genomics. 14:Article88.

Juedtz K, Aberdein N, Stewart D, McDougall GJ. 2013. Sequential extraction of black currant residues produce anthocyanin-rich extracts containing anthocyanin dimers. Journal of Berry Research. 3:53-64.

Bender FS, Plantenga F, Neftel A, Jocher M, Oberholzer HR, Kohl L, Giles M, Daniell T, Van der Heijden MGA. 2013. Symbiotic relationships between soil fungi and plants reduce N2O emissions from soil. ISME Journal. 8:1336-1345.

Sargent F, Davidson FA, Kelly CL, Binny R, Christodoulides N, Gibson D, Johansson E, Kozyrska K, Lado LL, MacCallum J et al.. 2013. A synthetic system for expression of components of a bacterial microcompartment. Microbiology-SGM. 159:2427-2436.

Jones JT, Haegeman A, Danchin EGJ, Gaur HS, Helder J, Jones MGK, Kikuchi T, Manzanilla-Lopez R, Palomares-Rius JE, Wesemael WML et al.. 2013. Top 10 plant parasitic nematodes in molecular plant pathology. Molecular Plant Pathology. 14:946-961.

Babikova Z, Gilbert L, Bruce TJA, Birkett M, Caulfield JC, Woodcock C, Pickett JA, Johnson D. 2013. Underground signals carried through common mycelial networks warn neighbouring plants of aphid attack. Ecology Letters. 16:835-843.

Dawson IK, Guariguata MR, Loo J, Weber JC, Lengkeek A, Bush D, Cornelius J, Guarino L, Kindt R, Orwa C et al.. 2013. What is the relevance of smallholders' agroforestry systems for conserving tropical tree species and genetic diversity in circa situm, in situ and ex situ settings? A review Biodiversity and Conservation. 22:301-324.

2014

Neacsu M, Fyfe C, Horgan G, Johnstone AM. 2014. Appetite control and biomarkers of satiety with vegetarian (soy) and meat-based high-protein diets for weight loss in obese men: a randomized crossover trial. American Journal of Clinical Nutrition. 100:548-558.

Babikova Z, Gilbert L, Bruce TJA, Dewhirst S, Pickett JA, Johnson D. 2014. Arbuscular mycorrhizal fungi and aphids interact by changing host plant quality and volatile emission. Functional Ecology. 28:375-385.

Helliwell RC, Wright RF, Jackson-Blake LA, Ferrier RC, Aherne J, Cosby BJL, Evans CD, Forsius M, Hruska J, Jenkins A et al.. 2014. Assessing recovery from acidification of European surface waters in the year 2010: evaluation of projections made with the MAGIC model in 1995. Environmental Science and Technology. 48:13280-13288.

Vinten AJA, Loades K, Addy S, Richards S, Stutter MI, Cook Y, Watson H, Taylor C, Abel C, Baggaley N et al.. 2014. Assessment of the use of sediment fences for control of erosion and sediment phosphorus loss after potato harvesting on sloping land. Science of the Total Environment. 468-469:1234-1244.

Tipping E, Benham S, Boyle JF, Crow P, Davies J, Fischer U, Guyatt H, Helliwell RC, Jackson-Blake L, Lawlor AJ et al.. 2014. Atmospheric deposition of phosphorus to land and freshwater. Environmental Science: Processes and Impacts. 16:1608-1617.

Banwart S, Black HIJ, Cai ZC, Gicheru P, Joosten H, Victoria R, Milne E, Noellemeyer E, Pascual U, Nziguheba G et al.. 2014. Benefits of soil carbon: report on the outcomes of an international scientific committee on problems of the environment rapid assessment workshop. Carbon Management. 5:185-192.

Liu WYY, Ridgway HJ, James TK, James EK, Chen WM, Sprent JI, Young JPW, Andrews M. 2014. Burkholderia sp. induces functional nodules on the South African invasive legume Dipogon lignosus (Phaseoleae) in New Zealand soils. Microbial Ecology. 68:542-555.

Kikuchi T, Cock PJA, Helder J, Jones JT. 2014. Characterisation of the transcriptome of Aphelenchoides besseyi and identification of a GHF 45 cellulase. Nematology. 16:99-107.

Burchill W, James EK, Li D, Lanigan GJ, Williams M, Iannetta PPM, Humphreys J. 2014. Comparisons of biological nitrogen fixation in association with white clover (Trifolium repens L.) under four fertiliser nitrogen inputs as measured using two 15N techniques. Plant and Soil. 385:287-302.

Moulin L, Klonowska A, Bournaud C, Booth K, Vriezen JAC, Melkonian R, James EK, Young JPW, Bena G, Hauser L et al.. 2014. Complete genome sequence of Burkholderia phymatum STM815T, a broad host range and efficient nitrogen-fixing symbiont of Mimosa species. Standards in Genomic Sciences. 9

Fisher DO, Johnson CN, Lawes MJ, Fritz SA, McCallum H, Blomberg SP, van der Wal J, Abbott B, Frank A, Legge S et al.. 2014. The current decline of tropical marsupials in Australia: is history repeating? Global Ecology and Biogeography. 23:181-190.

Joy EJM, Ander EL, Young SD, Black CR, Watts MJ, Chilimba ADC, Chilimba B, Siyame EWP, Kalimbira AA, Hurst R et al.. 2014. Dietary mineral supplies in Africa. Physiologia Plantarum. 151:208-229.

Palomares-Rius JE, Hirooka Y, Tsai IJ, Masuya H, Hino A, Kanzaki N, Jones JT, Kikuchi T. 2014. Distribution and evolution of glycoside hydrolase family 45 cellulases in nematodes and fungi. BMC Evolutionary Biology. 14

Potts T, Burdon D, Jackson E, Atkins J, Saunders J, Hastings E, Langmead O. 2014. Do Marine Protected Areas deliver flows of ecosystem services to support human welfare? Marine Policy. 44:139-148.

Hentley WT, Vanbergen AJ, Hails RS, Jones TH, Johnson SN. 2014. Elevated atmospheric CO2 impairs aphid escape responses to predators and conspecific alarm signals. Journal of Chemical Ecology. 40:1110-1114.

Jones J, Witek K, Verweij W, Jupe F, Cooke DEL, Dorling S, Tomlinson L, Smoker M, Perkins S, Foster S. 2014. Elevating crop disease resistance with cloned genes. Philosophical Transactions of the Royal Society B, Biological Sciences.. 369:ArticleNo20130087.

Gordon IJ, Evans DM, Garner TWJ, Katzner T, Gompper ME, Altwegg R, Branch TA, Johnson JA, Pettorelli N. 2014. Enhancing communication between conservation biologists and conservation practitioners: Letter from the Conservation Front Line. Animal Conservation. 17:1-2.

Frank ASK, Johnson CN, Potts JM, Fisher A, Lawes MJ, Woinarski JCZ, Tuft K, Radford IJ, Gordon IJ, Collis MA et al.. 2014. Experimental evidence that feral cats cause local extirpation of small mammals in Australia's tropical savannas. Journal of Applied Ecology. 51:1486-1493.

Eves-van den Akker S, Lilley CJ, Ault JR, Ashcroft AE, Jones JT, Urwin PE. 2014. The feeding tube of cyst nematodes: characterisation of protein exclusion. PLoS ONE. 9:e87289.

Wishart J, George TS, Brown LK, White PJ, Ramsay G, Jones HG, Gregory PJ. 2014. Field phenotyping of potato to assess root and shoot characteristics associated with drought tolerance. Plant and Soil. 378:351-363.

Asman AKM, Vetukuri RR, Jahan SN, Fogelqvist J, Corcoran P, Avrova AO, Whisson SC, Dixelius C. 2014. Fragmentation of tRNA in Phytophthora infestans asexual life cycle stages and during host plant infection. BMC Microbiology. 14

Wilkinson ME, Quinn PF, Barber NJ, Jonczyk J. 2014. A framework for managing runoff and pollution in the rural landscape using a Catchment Systems Engineering approach. Science of the Total Environment. 468-469:1245-1254.

Cotton JA, Lilley CJ, Jones LM, Kikuchi T, Reid AJ, Thorpe P, Tsai IJ, Beasley H, Blok VC, Cock PJA et al.. 2014. The genome and life-stage specific transcriptomes of Globodera pallida elucidate key aspects of plant parasitism by a cyst nematode. Genome Biology. 15

Thorpe P, Mantelin S, Cock PJA, Blok VC, Coke MC, van Den Akker SE, Guzeeva E, Lilley CJ, Smant G, Reid AJ et al.. 2014. Genomic characterisation of the effector complement of the potato cyst nematode Globodera pallida. BMC Genomics. 15

Melkonian R, Moulin R, Bena G, Tisseyre P, Chaintreuil C, Heulin K, Rezkallah N, Klonowska A, Gonzalez S, Simon M et al.. 2014. The geographical patterns of symbiont diversity in the invasive legume Mimosa pudica can be explained by the competitiveness of its symbionts and by the host genotype. Environmental Microbiology. 16:2099-2111.

Lobley GE, Johnstone AM, Fyfe C, Horgan GW, Holtrop G, Bremner DM, Broom I, Schweiger L, Welch A. 2014. Glucose uptake by the brain on chronic high-protein weight-loss diets with either moderate or low amounts of carbohydrate. British Journal of Nutrition. 111:586-597.

James MC, Gilbert L, Bowman AS, Forbes KJ. 2014. The heterogeneity, distribution and environmental associations of Borrelia burgdorferi sensu lato, the agent of Lyme borreliosis, in Scotland. Frontiers in Public Health, 2, Article 129. 2

Tomcynska I, Jupe F, Hein I, Marczewski W, Sliwka J. 2014. Hypersensitive response to Potato virus Y in potato cultivar Sarpo Mira is conferred by the Ny-Smira gene located on the long arm of chromosome IX. Molecular Breeding. 34:471-480.

van Den Akker SE, Lilley CJ, Jones JT, Urwin PE. 2014. Identification and characterisation of a hyper-variable apoplastic effector gene family of the potato cyst nematodes. PLoS Pathogens. 10:ArticleNo.e1004391.

Salonen A, Lahti L, Salojarvi J, Holtrop G, Korpela K, Duncan SH, Date P, Farquharson F, Johnstone AM, Lobley GE et al.. 2014. Impact of diet and individual variation on intestinal microbiota composition and fermentation products in obese men. ISME Journal. 8:2218-2230.

Seward AM, Beale CM, Gilbert L, Jones TH, Thomas RJ. 2014. The impact of increased food availability on reproduction in a long-distance migratory bird: Implications for Environmental Change? PLoS ONE. 9:e11180.

Lu YL, Song S, Wang RS, Liu ZY, Meng J, Sweetman AJ, Jenkins A, Ferrier RC, Li H, Luo W et al.. 2014. Impacts of soil and water pollution on food safety and health risks in China. Environment International. 77:5-15.

White PJ, George TS, Hammond JP, James EK. 2014. Improving crop mineral nutrition. Plant and Soil. 384:1-5.

Babikova Z, Gilbert L, Randall KC, Bruce TJA, Pickett JA, Johnson D. 2014. Increasing phosphorus supply is not the mechanism by which arbuscular mycorrhiza increase attractiveness of bean (Vicia faba) to aphids. Journal of Experimental Botany. 65:5231-5241.

Dockter C, Gruszka D, Braumann I, Druka A, Druka I, Franckowiak J, Gough SP, Janeczko A, Kurowska M, Lundqvist J et al.. 2014. Induced variations in Brassinosteroid genes define barley height and sturdiness, and expand the green revolution genetic toolkit. Plant Physiology. 166:1912-1927.

Zhang X, White RP, Demir E, Jedryczka M, Lange RM, Islam M, Li ZQ, Huang YJ, Hall AM, Zhou G et al.. 2014. Leptosphaeria spp., phoma stem canker and potential spread of L. maculans on oilseed rape crops in China. Plant Pathology. 63:598-612.

Tomczynska I, Stefanczyk E, Chmielarz M, Karasiewicz B, Kaminski P, Jones JDG, Lees AK, Sliwka J. 2014. A locus conferring effective late blight resistance in potato cultivar Sarpo Mira maps to chromosome XI. Theoretical and Applied Genetics. 127:647-657.

Sulpice R, Ishihara H, Schlereth A, Cawthray GR, Encke B, Giavalisco P, Ivakov A, Arrivault S, Jost R, Krohn N et al.. 2014. Low levels of ribosomal RNA partly account for the very high photosynthetic phosphorus-use efficiency of Proteaceae species. Plant Cell and Environment. 37:1276-1298.

Stubbs RJ, O'Reilly LM, Whybrow S, Fuller Z, Johnstone AM, Livingstone MBE, Ritz P, Horgan GW. 2014. Measuring the difference between actual and reported food intakes in the context of energy balance under laboratory conditions. British Journal of Nutrition. 111:2032-2043.

McIntyre N, Ballard C, Bruen M, Bulygina N, Buytaert W, Cluckie I, Dunn SM, Ehret U, Ewen J, Gelfan A et al.. 2014. Modelling the hydrological impacts of rural land use change. Hydrology Research. 45:737-754.

Helliwell RC, Aherne J, Nisbet TR, MacDougall G, Broadmeadow S, Sample J, Jackson-Blake L, Doughty R. 2014. Modelling the long-term response of stream water chemistry to forestry in Galloway, Southwest Scotland. Ecological Indicators. 37:396-411.

Chmielewska B, Janiak A, Karcz J, Guzy-Wrobelska J, Forster BP, Nawrot M, Rusek A, Smyda P, Kedziorski P, Maluszynski M et al.. 2014. Morphological, genetic and molecular characteristics of barley root hair mutants. Journal of Applied Genetics. 55:433-447.

Lisboa FJG, Peres-Neto PR, Chaer GM, Jesus EC, Mitchell RJ, Chapman SJ, Berbara RLL. 2014. Much beyond Mantel: bringing Procrustes Association metric to the plant and soil ecologist's toolbox. PLoS ONE. 9:e101238.

Holmes A, Birse L, Jackson RW, Holden NJ. 2014. An optimised method for the extraction of bacterial mRNA from plant roots infected with Escherichia coli O157:H7. Frontiers in Microbiology Research. 5

Fenton O, Healy MG, Brennan FP, Jahangir MMR, Lanigan GJ, Richards KG, Thornton SF, Ibrahim TG. 2014. Permeable reactive interceptors - blocking diffuse nutrient and greenhouse gases losses in key areas of the farming landscape. Journal of Agricultural Science. 152:S71-S81.

McMinn D, Oreskovic NM, Aitkenhead MJ, Johnston DW, Murtagh S, Rowe DA. 2014. The physical environment and health-enhancing activity during the school commute: global positioning system, geographical information systems and accelerometry. Geospatial Health. 8:569-572.

Ginetti B, Moricca S, Squires JN, Cooke DEL, Ragazzi A, Jung T. 2014. Phytophthora acerina sp. nov., a new species causing bleeding cankers and dieback of Acer pseudoplatanus trees in planted forests in northern Italy. Plant Pathology. 63:858-876.

Abad ZG, Abad JA, Cacciola SO, Pane A, Faedda R, Moralejo E, Perez-Sierra A, Abad-Campos P, Alvarez-Bernaola LA, Bakonyi J et al.. 2014. Phytophthora niederhauserii sp. nov., a polyphagous species associated with ornamentals, fruit trees and native plants in 13 countries. Mycologia. 106:431-447.

Jaouannet M, Rodriguez PA, Thorpe P, Lenoir CJG, MacLeod R, Escudero-Martinez C, Bos JIB. 2014. Plant immunity in plant-aphid interactions. Frontiers in Plant Science. 5

Zhang XG, McGeoch SC, Johnstone AM, Holtrop G, Sneddon AA, MacRury SM, Megson IL, Pearson DWM, Abraham P, de Roos B et al.. 2014. Platelet-derived microparticle count and surface molecule expression differ between subjects with and without type 2 diabetes, independently of obesity status. Journal of Thrombosis and Thrombolysis. 37:455-463.

Hudson LN, Newbold T, Contu S, Hill SLL, Lysenko I, De Palma A, Phillips HRP, Senior RA, Bennett DJ, Booth H et al.. 2014. The PREDICTS database: a global database of how local terrestrial biodiversity responds to human impacts. Ecology and Evolution. 4:4701-4735.

Bengtsson T, Weighill D, Proux-Wera E, Levander F, Resjo S, Burra DD, Moushib LI, Hedley PE, Liljeroth E, Jacobson D et al.. 2014. Proteomics and transcriptomics of BABA-induced resistance response in potato using a novel functional annotation approach. BMC Genomics. 15

Jones CM, Spor A, Brennan FP, Breuol MC, Bru D, Lemanceau P, Griffiths B, Hallin S, Philppot L. 2014. Recently identified microbial guild mediates soil N2O sink capacity. Nature Climate Change. 4:801-805.

Vega-Arreguin JC, Jalloh A, Bos JI, Moffett P. 2014. Recognition of an Avr3a homologue plays a major role in mediating nonhost resistance to Phytophthora capsici in Nicotiana species. Molecular Plant Microbe Interactions. 27:770-780.

Jones HG. 2014. Remote sensing of plant stresses and its use in irrigation management. Acta Horticulturae. 1038:239-247.

Bradford MA, Wood SA, Bardgett RD, Black HIJ, Bonkowski M, Eggers T, Grayston SJ, Kandeler E, Manning P, Setala H et al.. 2014. Reply to Byrnes et al.: Aggregation can obscure understanding of ecosystem multifunctionality. Proceedings of the National Academy of Sciences of the United States of America. 111:E5491-E5491.

Ghimire SK, Jones G. 2014. Restoration of a gauging weir to aid fish passage. Journal of Hydro-Environment Research. 8:43-49.

Saunders MJ, Kansiime F, Jones MB. 2014. Reviewing the carbon cycle dynamics and carbon sequestration potential of Cyperus papyrus L. wetlands in tropical Africa. Wetlands Ecology and Management. 22:143-155.

Smith HM, Blackstock KL, Wall G, Jeffrey P. 2014. River basin management, development planning, and opportunities for debate around limits to growth. Journal of Hydrology. 519:2624-2631.

Field C, Dise NB, Payne RJ, Britton AJ, Emmett BA, Helliwell RC, Hughes S, Jones L, Lees S, Leake JR et al.. 2014. The role of nitrogen deposition in widespread plant community change across semi-natural habitats. Ecosystems. 17:864-877.

Smith SW, Woodin SJ, Pakeman RJ, Johnson D, van der Wal R. 2014. Root traits predict decomposition across a landscape-scale grazing experiment. New Phytologist. 2013:851-862.

Raczynska KD, Stepien A, Kierzkowski D, Kalak M, Bajczyk M, McNicol J, Simpson CG, Szweykowska-Kulinska Z, Brown JWS, Jarmolowski A. 2014. The SERRATE protein is involved in alternative splicing in Arabidopsis thaliana. Nucleic Acids Research. 42:1224-1244.

Hentley WT, Hails RS, Johnson SN, Jones TH, Vanbergen AJ. 2014. Top-down control by Harmonia axyridis mitigates the impact of elevated atmospheric CO2 on a plant-aphid interaction. Agricultural and Forest Entomology. 16:350-358.

Elliott RM, de Roos B, Duthie SJ, Bouwman FG, Rubio-Aliaga I, Crosley LK, Mayer C, Polley AC, Heim C, Coort SL et al.. 2014. Transcriptome analysis of peripheral blood mononuclear cells in human subjects following a 36 h fast provides evidence of effects on genes regulating inflammation, apoptosis and energy metabolism. Genes and Nutrition. 9:ArticleNo.432.

Eves-van den Akker S, Lilley CJ, Danchin EGJ, Rancurel C, Cock PJA, Urwin PE, Jones JT. 2014. The transcriptome of Nacobbus aberrans reveals insights into the evolution of sedentary endoparasitism in plant-parasitic nematodes. Genome Biology and Evolution. 6:2181-2194.

Russell JR, Hedley PE, Cardle L, Dancey S, Morris J, Booth A, Odee D, Mwaura L, Omondi W, Angaine P et al.. 2014. tropiTree: an NGS-based EST-SSR resource for 24 tropical tree species. PLoS ONE. 9:e102502.

Babikova Z, Johnson D, Bruce TJA, Pickett JA, Gilbert L. 2014. Underground allies: how and why do mycelial networks help plants defend themselves? BioEssays. 36:21-26.

van der Jagt APN, Craig T, Anable J, Brewer MJ, Pearson DG. 2014. Unearthing the picturesque: the validity of the preference matrix as a measure of landscape aesthetics. Landscape and Urban Planning. 124:1-13.

Russell J, Hackett C, Hedley P, Lui H, Milne L, Bayer M, Marshall D, Jorgensen L, Gordon S, Brennan R. 2014. The use of genotyping by sequencing in blackcurrant (Ribes nigrum): developing high-resolution linkage maps in species without reference genome sequences. Molecular Breeding. 33:835-849.

Jones HG. 2014. The use of indirect or proxy markers in plant physiology. Plant Cell and Environment.

Brendel M, Janssen A, Mayer CD, Pauly M. 2014. Weighted logrank permutation tests for randomly right censored life science data. Scandinavian Journal of Statistics. 41:742-761.

2015

Sarkies P, Selkirk ME, Jones JT, Blok VC, Boothby T, Goldstein B, Hanelt B, Ardila-Garcia A, Fast NM, Schiffer PM et al.. 2015. Ancient and novel small RNA pathways compensate for the loss of piRNAs in multiple independent nematode lineages. PLoS Biology. 13:e1002061.

Zhang RX, Calixto CPG, Tzioutziou NA, James AB, Simpson CG, Guo WB, Marquez Y, Kalyna M, Patro R, Eyras E et al.. 2015. AtRTD - a comprehensive reference transcript dataset resource for accurate quantification of transcript-specific expression in Arabidopsis thaliana. New Phytologist. 208:96-101.

Evans DM, Altwegg R, Garner TWJ, Gompper ME, Gordon IJ, Johnson JA, Pettorelli N. 2015. Biodiversity offsetting: what are the challenges, opportunities and research priorities for animal conservation? Animal Conservation. 18:1-3.

Sheu SY, Chen MH, Liu WYY, Andrews M, James EK, Ardley JK, De Meyer SE, James TK, Howieson JG, Coutinho BG et al.. 2015. Burkholderia dipogonis sp. Nov., isolated from root nodules of Dipogon lignosus in New Zealand and Western Australia. International Journal of Systematic and Evolutionary Microbiology. 65:4716-4723.

Jorgensen MW, Jarvis S, Brewer MJ, Goddard PJ. 2015. Calf mortality in semi-domestic reindeer (Rangifer tarandus) in a Scottish herd: the impact of maternal age and individual differences between cows. Animal Welfare. 24:173-183.

Quilliam RS, van Niekerk MA, Chadwick DR, Cross P, Hanley N, Jones DL, Vinten AJA, Olivers DM. 2015. Can macrophyte harvesting from eutrophic water close the loop on nutrient loss from agricultural land? Journal of Environmental Management. 152:210-217.

Jaouannet M, Morris JA, Hedley PE, Bos JB. 2015. Characterization of Arabidopsis transcriptional responses to different aphid species reveals genes that contribute to host susceptibility and non-host resistance. PLoS Pathogens. 11:e1004918.

Jones HG, Gordon SL, Brennan RM. 2015. Chilling requirement of Ribes cultivars. Frontiers in Plant Science. 5

Chapman JA, Mascher M, Buluc A, Barry K, Georganas E, Session A, Strnadova V, Jenkins J, Seghal S, Oliker L et al.. 2015. Chromosome-scale assembly of the hexaploid wheat genome from whole genome shotgun sequencing. Genome Biology. 16

Smith SW, Johnson D, Quin SLO, Munro K, Pakeman RJ, van der Wal R, Woodin SJ. 2015. Combination of herbivore removal and nitrogen deposition increases upland carbon storage. Global Change Biology.. 21:3036-3048.

Obidiegwu JE, Bryan GJ, Jones HG, Prashar A. 2015. Coping with drought: stress and adaptive responses in potato and perspectives for improvement. Frontiers in Plant Science. 6:ArticleNo.542.

Ewert F, Rotter RP, Bindi M, Webber H, Trnka M, Kersebaum KC, Olesen JE, Van Ittersum MK, Janssen S, Rivington M et al.. 2015. Crop modelling for integrated assessment of risk to food production from climate change. Environmental Modelling and Software. 72:287-303.

Homayoun M, Jalalian A, Besalatpour AA, Basirat A, Aalders IH. 2015. Determining relationships between soil properties and plant distribution in a protected area in central Iran. Maejo International Journal of Science and Technology. 9:136-146.

Malolepszy A, Urbanski DF, James EK, Sandal N, Isono E, Stougaard J, Andersen SU. 2015. The deubiquitinating enzyme AMSH1 is required for rhizobial infection and nodule organogenesis in Lotus japonicus. The Plant Journal. 83:719-731.

Thomas D, Finan C, Newport MJ, Jones S. 2015. DNA-entropy reveals a significant difference in complexity between housekeeping and tissue specific gene promoters. Computational Biology and Chemistry. 58:19-24.

Jackson-Blake LA, Starrfelt J. 2015. Do higher data frequency and Bayesian auto-calibration lead to better model calibration? Insights from an application of INCA-P, a process-based river phosphorus model Journal of Hydrology. 527:641-655.

Holden NJ, Jackson RW, Schikora A. 2015. Editorial on plants as alternative hosts for human and animal pathogens. Frontiers in Microbiology. 6

Deng WN, Hallett PD, Jeng DS, Squire GR, Toorop PE, Iannetta PPM. 2015. The effect of natural seed coatings of Capsella bursa-pastoris L. Medik. (shepherd's purse) on soil-water retention, stability and hydraulic conductivity. Plant and Soil. 387:167-176.

Phillips D, Jenkins G, Macaulay M, Nibau C, Wnetrzak J, Fallding D, Colas I, Oakey H, Waugh R, Ramsay L. 2015. The effect of temperature on the male and female recombination landscape of barley. New Phytologist. 208:421-429.

Cerekovic N, Jarret D, Pagter M, Cullen DW, Morris JM, Hedley PE, Brennan R, Petersen KK. 2015. The effects of drought stress on leaf gene expression during flowering in blackcurrant (Ribes nigrum L.). European Journal of Horticultural Science. 80:39-46.

Barzman M, Barberi P, Birch ANE, Boonekamp P, Dachbrodt-Saaydeh S, Graf B, Hommel B, Jensen JE, Kiss J, Kudsk P et al.. 2015. Eight principles of integrated pest management. Agronomy for Sustainable Development. 35:1199-1215.

Fry WE, Birch PRJ, Judelson HS, Grunwald NJ, Danies G, Everts KL, Gevens AJ, Gugino BK, Johnson DA, Johnson SB et al.. 2015. Five reasons to consider Phytophthora infestans a reemerging pathogen. Phytopathology. 105:966-981.

Matamoros MA, Saiz A, Penuelas M, Bustos-Sanmamed P, Mulet JM, Barja MV, Rouhier N, Moore M, James EK, Dietz KJ et al.. 2015. Function of glutathione peroxidases in legume root nodules. Journal of Experimental Botany. 66:2979-2990.

Greene S, Johnes PJ, Bloomfield JP, Reaney SM, Lawley R, Elkhatib Y, Freer J, Odoni N, Macleod CJA, Percy B. 2015. A geospatial framework to support integrated biogeochemical modelling in the United Kingdom. Environmental Modelling and Software. 68:219-232.

Kumssa DB, Joy EJM, Ander EL, Watts MJ, Young SD, Rosanoff A, White PJ, Walker S, Broadley MR. 2015. Global magnesium supply in the food chain. Crop and Pasture Science. 66:1278-1289.

Li X, Yeluripati J, Jones EO, Uchida Y, Hatano R. 2015. Hierarchical Bayesian calibration of nitrous oxide (N2O) and nitrogen monoxide (NO) flux module of an agro-ecosystem model: ECOSSE. Ecological Modelling. 316:14-27.

Mladkova P, Mladek J, Hejduk S, Hejcman M, Cruz P, Jouany C, Pakeman RJ. 2015. High-nature-value grasslands have the capacity to cope with nutrient impoverishment induced by mowing and livestock grazing. Journal of Applied Ecology. 52:1073-1081.

Axelsson EP, Iason GR, Julkunen-Tiitto R, Whitham TG. 2015. Host genetics and environment drive divergent responses of two resource sharing gall-formers on Norway spruce: a common garden analysis. PLoS ONE. 10:e0142257.

Jackson-Blake LA, Dunn SM, Helliwell RC, Skeffington RA, Stutter MI, Wade AJ. 2015. How well can we model stream phosphorus concentrations in agricultural catchments? Environmental Modelling and Software. 64:31-46.

Main CE, Ruhl HA, Jones DOB, Yool A, Thornton B, Mayor DJ. 2015. Hydrocarbon contamination affects deep-sea benthic oxygen uptake and microbial community composition. Deep Sea Research Part 1 - Oceanographic Research Papers. 100:79-87.

Lu YL, Song S, Wang RS, Liu ZY, Meng J, Sweetman AJ, Jenkins A, Ferrier RC, Li H, Luo W et al.. 2015. Impacts of soil and water pollution on food safety and health risks in China. Environment International. 77:5-15.

Brooker RW, Bennett AE, Cong WF, Daniell TJ, George TS, Hallett PD, Hawes C, Iannetta PPM, Jones HG, Karley AJ et al.. 2015. Improving intercropping: a synthesis of research in agronomy, plant physiology and ecology. New Phytologist. 206:107-117.

Balana BB, Jackson-Blake L, Martin-Ortega J, Dunn SM. 2015. Integrated cost-effectiveness analysis of agri-environmental measures for water quality. Journal of Environmental Management. 161:163-172.

Johnson D, Gilbert L. 2015. Interplant signalling through hyphal networks. New Phytologist. 205:1448-1453.

Zgadzaj R, James EK, Kelly S, Kawaharada Y, de Jonge N, Jensen DB, Madsen LH, Radutoiu S. 2015. A legume genetic framework controls infection of nodules by symbiotic and endophytic bacteria. PLoS Genetics. 11:e1005280.

Jurado NV, Tanner AE, Blevins SR, McNair HM, Mayes RW, Lewis RM. 2015. Long-chain alcohols did not improve predictions of the composition of tall fescue and red clover mixtures over n-alkanes alone. Grass and Forage Science. 70:499-506.

Rutgers M, Orgiazzi A, Gardi C, Rombke J, Jansch S, Keith AM, Neilson R, Boag B, Schmidt O, Murchie AK et al.. 2015. Mapping earthworm communities in Europe. Applied Soil Ecology. 97:98-111.

Vanga BR, Ramakrishnan P, Butler RC, Toth IK, Ronson CW, Jacobs JME, Pitman AR. 2015. Mobilization of horizontally acquired island 2 is induced in planta in the phytopathogen Pectobacterium atrosepticumSCRI1043 and involves the putative relaxase ECA0613 and quorum sensing. Environmental Microbiology. 17:4730-4744.

Martre P, Wallach D, Asseng S, Ewert F, Jones JW, Rotter RP, Boote KJ, Ruane AC, Thorburn PJ, Cammarano D et al.. 2015. Multimodel ensembles of wheat growth: many models are better than one. Global Change Biology. 21:911-925.

Cock PJA, Chilton JM, Gruning B, Johnson JE, Soranzo N. 2015. NCBI BLASTplus integrated into Galaxy. Technical note. GigaScience. 4

Mei Y, Thorpe P, Guzha A, Haegeman A, Blok VC, MacKenzie K, Gheysen G, Jones JT, Mantelin S. 2015. Only a small subset of the SPRY domain gene family in Globodera pallida is likely to encode effectors, two of which suppress host defences induced by the potato resistance gene Gpa2. Nematology. 17:409-424.

Blackstock KL, Dinnie L, Dilley R, Marshall K, Dunglinson J, Trench H, Harper K, Finan K, MacPherson J, Johnston E et al.. 2015. Participatory research to influence participatory governance: managing relationships with planners. Area. 47:254-260.

Vagiri M, Conner S, Stewart D, Andersson SC, Verrall S, Johansson E, Rumpunen K. 2015. Phenolic compounds in blackcurrant (Ribes nigrum L.) leaves relative to leaf position and harvest date. Food Chemistry. 172:135-142.

Gilbert L, Johnson D. 2015. Plant-mediated 'apparent effects' between mycorrhiza and insect herbivores. Current Opinion in Plant Biology. 26:100-105.

Eves-van den Akker S, Lilley CJ, Jones JT, Urwin PE. 2015. Plant-parasitic nematode feeding tubes and plugs: new perspectives on function. Nematology. 17:1-9.

Hollis JM, Lilly A, Higgins A, Jones RJA, Keay CA, Bellamy P. 2015. Predicting the water retention characteristics of UK soils. European Journal of Soil Science. 66:239-252.

Harrison PJ, Yuan Y, Buckland ST, Oedekoven CS, Elston DA, Brewer MJ, Johnston A, Pearce-Higgins JW. 2015. Quantifying turnover in biodiversity of British breeding birds. Journal of Applied Ecology. 53:469-478.

Fisher DO, Johnson CN, Lawes MJ, Fritz SA, McCallum H, Blomberg SP, van der Wal J, Abbott B, Frank A, Legge S et al.. 2015. Response to commentary by Woinarski (Critical-weight-range marsupials in northern Australia are declining: a commentary on Fisher et al. (2014) 'The current decline of tropical marsupials in Australia: is history repeating?') Global Ecology and Biogeography. 24:123-125.

Lobley GE, Holtrop G, Horgan GW, Bremner DM, Fyfe C, Johnstone AM. 2015. Responses in gut hormones and hunger to diets with either high protein or a mixture of protein plus free amino acids supplied under weight-loss conditions. British Journal of Nutrition. 113:1254-1270.

Albert A, Auffret AG, Cosyns E, Cousins SAO, D'Hondt B, Eichberg C, Eycott AE, Heinken T, Hoffmann M, Jaroszewicz B et al.. 2015. Seed dispersal by ungulates as an ecological filter: a trait-based meta-analysis. Oikos. 124:1109-1120.

Bird DM, Jones JT, Opperman CH, Kikuchi T, Danchin EGJ. 2015. Signatures of adaptation to plant parasitism in nematode genomes. Parasitology. 142:S71-S84.

Jarvis SG, Woodward S, Taylor AFS. 2015. Strong altitudinal partitioning in the distributions of ectomycorrhizal fungi along a short (300 m) elevation gradient. New Phytologist. 206:1145-1155.

Lemaire B, Dlodlo O, Chimphango S, Stirton C, Schrire B, Boatwright JS, Honnay O, Smets E, Sprent JI, James EK et al.. 2015. Symbiotic diversity, specificity and distribution of rhizobia in native legumes of the Core Cape Subregion (South Africa). FEMS Microbiology Ecology. 91:1-17.

Kamoun S, Furzer O, Jones JDG, Judelson HS, Ali GS, Dalio RJD, Roy SG, Schena L, Zambounis A, Panabieres F et al.. 2015. The top 10 oomycete pathogens in molecular plant pathology. Molecular Plant Pathology. 16:413-434.

Martin-Ortega J, Perni A, Jackson-Blake L, Balana BB, Dunn SM, McKee A, Helliwell RC, Psaltopoulos D, Skuras D, Cooksley S et al.. 2015. A transdisciplinary approach to the economic analysis of the European Water Framework Directive. Ecological Economics. 116:34-45.

Wang C, Miller DR, Brown I, Jiang Y, Castellazzi M. 2015. Visualisation techniques to support public interpretation of future climate change and land use choices: a case study from N-E Scotland. International Journal of Digital Earth. Published online.

2016

Hentley WT, Vanbergen AJ, Beckerman AP, Brien MN, Hails RS, Jones TH, Johnson SN. 2016. Antagonistic interactions between an invasive alien and a native coccinellid species may promote coexistence. Journal of Animal Ecology. 85:1087-1097.

Hannam KD, Kehila D, Millard P, Midwood AJ, Neilsen D, Neilsen GH, Forge TA, Nichol C, Jones MD. 2016. Bicarbonates in irrigation water contribute to carbonate formation and CO2 production in orchard soils under drip irrigation. Geoderma. 266:120-126.

Lemaire B, Chimphango S, Stirton C, Rafundeen S, Honnay O, Smets E, Chen WM, Sprent JI, James EK, Muasya AM. 2016. Biogeographical patterns of legume-nodulating Burkholderia spp.: from African Fynbos to continental scales. Applied and Environmental Microbiology. 82:5099-5115.

Espada M, Jones JT, Mota M. 2016. Characterization of glutathione S-transferases from the pinewood nematode, Bursaphelenchus xylophilus. Nematology. 18:697-709.

Lemaire B, Van Cauwenberghe J, Verstraete B, Chimphango S, Stirton C, Honnay O, Smets E, Sprent JI, James EK, Muasya AM. 2016. Characterization of the papilionoid-Burkholderia interaction in the Fynbos biome: the diversity and distribution of beta-rhizobia nodulating Podalyria calyptrata (Fabaceae, Podalyrieae). Systematic and Applied Microbiology. 39:41-48.

Iannetta PPM, Young M, Bachinger J, Bergkvist G, Lopez-Bellido RJ, Monti M, Pappa VA, Reckling M, Topp CFE, Walker RL et al.. 2016. A comparative nitrogen balance and productivity analysis of legume and non-legume supported cropping systems: the potential role of biological nitrogen fixation. Frontiers in Plant Science. 7:ArticleNo.1700..

Lin H, Jin DF, Freitag TE, Sun WC, Yu QG, Fu JR, Ma JW. 2016. A compositional shift in the soil microbiome induced by tetracycline, sulfamonomethoxine and ciprofloxacin entering a plant-soil system. Environmental Pollution. 212:440-448.

McCallum S, Graham J, Jorgensen A, Rowland LJ, Bassil NV, Hancock JF, Wheeler EJ, Vining K, Poland JA, Olmstead JW et al.. 2016. Construction of a SNP and SSR linkage map in autotetraploid blueberry using genotyping by sequencing. Molecular Breeding. 36:ArticleNo.4.

Crozier L, Hedley PE, Morris J, Wagstaff C, Andrews SC, Toth I, Jackson RW, Holden N. 2016. Corrigendum: whole-transcriptome analysis of verocytotoxigenic Escherichia coli O157:H7 (Sakai) suggests plant-species-specific metabolic responses on exposure to spinach and lettuce extracts. Frontiers in Microbiology.. 7

Mitra A, Flynn KJ, Tillmann U, Raven JA, Caron D, Stoecker DK, Not F, Hansen PJ, Hallegraeff G, Sanders R et al.. 2016. Defining planktonic protist functional groups on mechanisms for energy and nutrient acquisition: incorporation of diverse mixotrophic strategies. Protist. 167:106-120.

Correia B, Valledor L, Hancock RD, Jesus C, Amaral J, Meijon M, Pinto G. 2016. Depicting how Eucalyptus globulus survives drought: involvement of redox and DNA methylation events. Functional Plant Biology. 43:838-850.

Hourston JE, Bennett AE, Johnson SN, Gange AC. 2016. Does the slow-growth, high-mortality hypothesis apply below ground? PLoS ONE. 11:ArticleNo.e0161904.

Lin X, Wang D, Gu S, White PJ, Han K, Zhou J, Jin S. 2016. Effect of supplemental irrigation on the relationships between leaf ABA concentrations, tiller development and photosynthate accumulation and remobilization in winter wheat. Plant Growth Regulation.. 79:331-343.

Bontemps C, Rogel MA, Wiechmann A, Mussabekova A, Moody S, Simon MF, Moulin L, Elliott GN, Lacercat-Didier L, Dasilva C et al.. 2016. Endemic Mimosa species from Mexico prefer alphaproteobacterial rhizobial symbionts. New Phytologist. 209:319-333.

Lavoie M, Raven JA, Jones OAH, Qian HF. 2016. Energy cost of intracellular metal and metalloid detoxification in wild-type eukaryotic phytoplankton. Metallomics. 8:1097-1109.

Li X, Toma Y, Yeluripati J, Iwasaki S, Bellingrath-Kimura SD, Jones EO, Hatano R. 2016. Estimating agro-ecosystem carbon balance of northern Japan, and comparing the change in carbon stock by soil inventory and net biome productivity. Science of the Total Environment. 554:293-302.

Karley AJ, Mitchell C, Brookes C, McNicol J, O'Neill T, Roberts H, Graham J, Johnson SN. 2016. Exploiting physical defence traits for crop protection: leaf trichomes of Rubus idaeus have deterrent effects on spider mites but not aphids. Annals of Applied Biology. 168:159-172.

Lea RG, Amezaga MR, Loup B, Mandon-Pépin B, Stefansdottir A, Filis P, Kyle C, Zhang ZL, Allen C, Purdie L et al.. 2016. The fetal ovary exhibits temporal sensitivity to a "real-life" mixture of environmental chemicals. Scientific Reports. 6:22279.

Inberg S, Jacob E, Elkobi A, Edry E, Rappaport A, Simpson TI, Armstrong JD, Shomron N, Pasmanik-Chor M, Rosenblum K. 2016. Fluid consumption and taste novelty determines transcription temporal dynamics in the gustatory cortex. Molecular Brain. 9

Eves-van den Akker S, Lilley CJ, Yusup HB, Jones JT, Urwin PE. 2016. Functional C-TERMINALLY ENCODED PEPTIDE (CEP) plant hormone domains evolved de novo in the plant parasite Rotylenchulus reniformis. Molecular Plant Pathology. 17:1265-1275.

Palomares-Rius JE, Hedley P, Cock PJA, Morris JA, Jones JT, Blok VC. 2016. Gene expression changes in diapause or quiescent potato cyst nematode, Globodera pallida, eggs after hydration or exposure to tomato root diffusate. PeerJ. 4

Eves-van den Akker S, Laetsch DR, Thorpe P, Lilley CJ, Danchin EGJ, Da Rocha M, Rancurel C, Holroyd NE, Cotton JA, Szitenberg A et al.. 2016. The genome of the yellow potato cyst nematode, Globodera rostochiensis, reveals insights into the basis of parasitism and virulence. Genome Biology. 17

Jost M, Taketa S, Mascher M, Himmelbach A, Yuo T, Shahinnia F, Rutten T, Druka A, Schmutzer T, Steuernagel B et al.. 2016. A homolog of Blade-On-Petiole 1 and 2 (BOP1/2) controls internode length and homeotic changes of the barley inflorescence. Plant Physiology. 171:1113-1127.

Danchin EGJ, Guzeeva E, Mantelin S, Berekpiki A, Jones JT. 2016. Horizontal gene transfer from bacteria has enabled the plant-parasitic nematode Globodera pallida to feed on plant-derived sucrose. Molecular Biology and Evolution. 33:1571-1579.

Espada M, Silva AC, van Den Akker SE, Cock PJA, Mota M, Jones JT. 2016. Identification and characterization of parasitism genes from the pinewood nematode Bursaphelenchus xylophilus reveals a multilayered detoxification strategy. Molecular Plant Pathology. 17:286-295.

Jost M, Hensel G, Kappel C, Druka A, Sicard A, Hohmann U, Beier S, Himmelbach A, Waugh R, Kumlehn J et al.. 2016. The INDETERMINATE DOMAIN protein BROAD LEAF1 limits barley leaf width by restricting lateral proliferation. Current Biology. 26:903-909.

Jackson-Blake LA, Wade AJ, Futter MN, Butterfield D, Couture RM, Cox BA, Crossman J, Ekholm P, Halliday SJ, Jin L et al.. 2016. The INtegrated CAtchment model of phosphorus dynamics (INCA-P): Description and demonstration of new model structure and equations. Environmental Modelling and Software. 83:356-386.

Kaspersen BS, Jacobsen TV, Butts MB, Boegh E, Muller HG, Stutter MI, Fredenslund AM, Kjaer T. 2016. Integrating climate change mitigation into river basin management planning for the Water Framework Directive - A Danish case. Environmental Science and Policy. 55:141-150.

Rutgers M, Orgiazzi A, Gardi C, Rombke J, Jansch S, Keith AM, Neilson R, Boag B, Schmidt O, Murchie AK et al.. 2016. Mapping earthworm communities in Europe. Applied Soil Ecology. 97:98-111.

Delgado-Baquerizo M, Maestre FT, Reich PB, Jeffries TC, Gaitán JJ, Encinar D, Berdugo M, Campbell CD, Singh BK. 2016. Microbial diversity drives multifunctionality in terrestrial ecosystems. Nature Communications. 7

Vereecken H, Schnepf A, Hopmans JW, Javaux M, Or D, Roose DOT, Vanderborght J, Young MH, Amelung W, Aitkenhead M et al.. 2016. Modeling soil processes: Review, key challenges, and new perspectives. Vadose Zone Journal. 15

de Jesus DS, Oliveira CMG, Roberts D, Blok V, Neilson R, Prior T, Balbino HM, MacKenzie KM, Oliveira RDD. 2016. Morphological and molecular characterisation of Aphelenchoides besseyi and A. fujianensis (Nematoda: Aphelenchoididae) from rice and forage grass seeds in Brazil. Nematology. 18:337-356.

Tak N, Awasthi E, Bissa G, Meghwal RR, James EK, Sprent JS, Gehlot HS. 2016. Multi locus sequence analysis and symbiotic characterization of novel Ensifer strains nodulating Tephrosia spp. In the Indian Thar Desert. Systematic and Applied Microbiology. 39:534-545.

Gonzalez-Andres F, James E. 2016. National meeting of the Spanish Society of Nitrogen Fixation (XV SEFIN). Symbiosis. 67:1-2.

Lamichhane JR, Aubertot JN, Begg G, Birch ANE, Boonekamp P, Dachbrodt-Saaydeh S, Hansen JG, Hovmoller MS, Jensen JE, Jorgensen KLNJ et al.. 2016. Networking of integrated pest management: a powerful approach to address common challenges in agriculture. Crop Protection. 89:139-151.

Johnson SN, Benefer CM, Frew A, Griffiths BS, Hartley SE, Karley AJ, Rasmann S, Schumann M, Sonnemann I, Robert CAM. 2016. New frontiers in belowground ecology for plant protection from root-feeding insects. Applied Soil Ecology. 108:96-107.

Platero R, James EK, Rios C, Iriarte A, Sandes L, Zabaleta M, Battistoni F, Fabiano E. 2016. Novel Cupriavidus strains isolated from root nodules of native Uruguayan Mimosa species. Applied and Environmental Microbiology. 82:3150-3164.

Sjogersten S, Caul S, Daniell TJ, Jurd APS, O'Sullivan OS, Stapleton CS, Titman JJ. 2016. Organic matter chemistry controls greenhouse gas emissions from permafrost peatlands. Soil Biology and Biochemistry. 98:42-53.

Whybrow S, Stubbs RJ, Johnstone AM, O'Reilly LM, Fuller Z, Livingstone MBE, Horgan GW. 2016. Plausible self-reported dietary intakes in a residential facility are not necessarily reliable. European Journal of Clinical Nutrition. 70:130-135.

Zheng CZ, Voorrips RE, Jansen J, Hackett CA, Ho JL, Bink MCAM. 2016. Probabilistic multilocus haplotype reconstruction in outcrossing tetraploids. Genetics. 203:119-131.

Harrison PJ, Yuan Y, Buckland ST, Oedekoven CS, Elston DA, Brewer MJ, Johnston A, Pearce-Higgins JW. 2016. Quantifying turnover in biodiversity of British breeding birds. Journal of Applied Ecology. 53:469-478.

Mitra S, Mukherjee A, Wiley-Kalil A, Das S, Owen H, Reddy PM, Ane JM, James EK, Gyaneshwar P. 2016. A rhamnose-deficient lipopolysaccharide mutant of Rhizobium sp. IRBG74 is defective in root colonization and beneficial interactions with its flooding-tolerant hosts Sesbania cannabina and wetland rice. Journal of Experimental Botany. 67:5869-5884.

Barauna AC, Rouws LFM, Simoes-Araujo JL, Dos Reis Junior FB, Iannetta PPM, Maluk M, Goi SR, Reis VM, James EK, Zilli JE. 2016. Rhizobium altiplani sp. nov. isolated from effective nodules on Mimosa pudica growing in untypically alkaline soil in Central Brazil. International Journal of Systematic and Evolutionary Microbiology. 66:1-7.

Mitra S, Mukherjee A, Wiley-Kalil A, Das S, Owen H, Reddy PM, Ane JM, James EK, Gyaneshwar P. 2016. Role of lipopolysaccharide and biofilm formation during endophytic colonization of rice (Oryza sativa L.) and nodulation of Sesbania cannabina by Rhizodium sp. IRBG74. Journal of Experimental Botany. 67:5869-5884.

Young JC, Searle K, Butler A, Simmons P, Watt AD, Jordan A. 2016. The role of trust in the resolution of conservation conflicts. Biological Conservation. 195:196-202.

McKenzie SW, Johnson SN, Jones TH, Ostle NJ, Hails RS, Vanbergen AJ. 2016. Root herbivores drive changes to plant primary chemistry, but root loss is mitigated under elevated atmospheric CO2. Frontiers in Plant Science. 7

Callaby R, Toye P, Jennings A, Thumbi SM, Coetzer JAW, Van Wyk ICC, Hanotte O, Mbole-Kariuki MN, Bronsvoort BMD, Kruuk LEB et al.. 2016. Seroprevalence of respiratory viral pathogens of indigenous calves in Western Kenya. Research in Veterinary Science. 108:120-124.

Ross LC, Austrheim G, Asheim LJ, Bjarnason G, Feilberg J, Fosaa AM, Hester AJ, Holand O, Jonsdottir IS, Mortensen LE et al.. 2016. Sheep grazing in the North Atlantic region: A long-term perspective on environmental sustainability. Ambio. 45:551-566.

Habtom H, Demaneche S, Dawson LA, Azulay C, Matan O, Robe P, Gafny R, Simonet P, Jurkevitch E, Pasternak Z. 2016. Soil characterisation by bacterial community analysis for forensic applications: a quantitative comparison of environmental technologies. Forensic Science International. 26:21-29.

Kritzler UH, Artz RRE, Johnson D. 2016. Soil CO2 efflux in a degraded raised bog is regulated by water table depth rather than recent plant assimilate. Mires and Peat. 17:1-14.

Cheng YH, Jiang Y, Wu Y, Valentine TA, Li HX. 2016. Soil nitrogen status modifies rice root response to nematode-bacteria interactions in the rhizosphere. PLoS ONE. 11

O'Gorman EJ, Olafsson OP, Demars BOL, Friberg N, Gudbergsson G, Hannesdottir ER, Jackson MC, Johansson LS, McLaughlin OB, Olafsson JS et al.. 2016. Temperature effects on fish production across a natural thermal gradient. Global Change Biology. 22:3206-3220.

Stocker BD, Prentice IC, Cornell SE, Davies-Barnard T, Finzi AC, Franklin O, Janssens I, Larmola T, Manzoni S, Nasholm T et al.. 2016. Terrestrial nitrogen cycling in earth system models revisited. New Phytologist. 210:1165-1168.

Tsai IJ, Tanaka R, Kanzaki N, Akiba M, Yokoi T, Espada M, Jones JT, Kikuchi T. 2016. Transcriptional and morphological changes in the transition from mycetophagous to phytophagous phase in the plant-parasitic nematode Bursaphelenchus xylophilus. Molecular Plant Pathology. 17:77-83.

Jager NW, Challies E, Kochskämper E, Newig J, Benson D, Blackstock KL, Collins K, Ernst A, Evers M, Feichtinger J et al.. 2016. Transforming European water governance? EU water framework directive implementation in 13 member states Water. :ArticleNo.156.

Cammarano D, Rotter RP, Asseng S, Ewert F, Wallach D, Martre P, Hatfield JL, Jones JW, Rosenzweig C, Ruane AC et al.. 2016. Uncertainty of wheat water use: Simulated patterns and sensitivity to temperature and CO2. Field Crops Research. 198:80-92.