Publications list
Filters: First Letter Of Last Name is S [Clear All Filters]
Genetic characterization of a reciprocal translocation present in a widely grown barley variety. Molecular Breeding. 30:1109-1119.
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2012.
Genetic characterization of the HrpL regulon of the fire blight pathogen Erwinia amylovora reveals novel virulence factors. Molecular Plant Pathology. 13:160-173.
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2012.
Genetic diversity in European Pisum germplasm collections. Theoretical and Applied Genetics. 125:367-380.
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2012.
Genetic linkage mapping in an F2 perennial ryegrass population saturated with DArT markers. Plant Breeding. 131:345-349.
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2012.
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2012.
Genome analyses of an aggressive and invasive lineage of the Irish potato famine pathogen. PLoS Pathogens. 8:e1002940.
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2012.
Genome sequencing and mapping reveal loss of heterozygosity as a mechanism for rapid adaptation in the vegetable pathogen phytophthora capsici. Molecular Plant-Microbe Interactions. 25:1350-1360.
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2012.
Genome-wide identification of genes regulated by the Rcs phosphorelay system in Erwinia amylovora. Molecular Plant-Microbe Interactions. 25:6-17.
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2012.
Glasshouse vs field experiments: do they yield ecologically similar results for assessing N impacts on peat mosses? New Phytologist. 195:408-418.
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2012.
Global change and the world's mountains: research needs and emerging themes for sustainable development. A synthesis from the 2010 Perth II conference. Mountain Research and Development. 32:S47-S54.
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2012.
Hierarchical Bayesian models in ecology: Reconstructing species interaction networks from non-homogeneous species abundance data. Ecological Informatics. 11:55-64.
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2012.
High-frequency storm event isotope sampling reveals time-variant transit time distributions and influence of diurnal cycles. Hydrological Processes. 26:308-316.
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2012.
An hnRNP-like RNA-binding protein affects alternative splicing by in vivo interaction with transcripts in Arabidopsis thaliana. Nucleic Acids Research. 40:11240-11255.
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2012.
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2012.
Host-targeting protein 1 (SpHtp1) from the oomycete Saprolegnia parasitica translocates specifically into fish cells in a tyrosine-O-sulphate-dependent manner. Proceedings of the National Academy of Sciences. 109:2096-2101.
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2012.
How should regional biodiversity be monitored? Environmental and Ecological Statistics. 19:601-626.
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2012.
How to manage the impact of gene flow on oilseed rape grain quality? Simulation case studies of three contrasted landscapes European Journal of Agronomy. 38:32-42.
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2012.
The identification and interpretation of differences in the transcriptomes of organically and conventionally grown potato tubers. Journal of Agricultural and Food Chemistry. 60:2090-2101.
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2012.
Identification and localisation of the NB-LRR gene family within the potato genome. BMC Genomics. 13:1-14.
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2012.
Impact of endocrine-disrupting compounds (EDCs) on female reproductive health. Molecular and Cellular Endocrinology. 355:231-239.
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2012.
Impacts of artificial structures on the freshwater pearl mussel Margaritifera margaritifera in the River Dee, Scotland. Aquatic Conservation: Marine and Freshwater Ecosystems. 22:318-330.
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2012.
Impacts of atmospheric nitrogen deposition: responses of multiple plant and soil parameters across contrasting ecosystems in long-term field experiments. Global Change Biology. 18:1197-1215.
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2012.
Impacts of climate, host and landscape factors on Culicoides species in Scotland. Medical and Veterinary Entomology. 26:168-177.
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2012.
Impacts of flow regulation on freshwater pearl mussel (Margaritifera margaritifera) habitat in a Scottish montane river. Science of the Total Environment. 432:318-328.
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2012.
Induced mutations in circadian clock regulator Mat-a facilitated short-season adaptation and range extension in cultivated barley. Proceedings of the National Academy of Sciences, USA. 109:4326-4331.
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2012.
The influence of herbage mass and supplementary feeding on nutrient flows and animal performance in grazing, lactating ewes. Journal of Agricultural Science. 150:644-662.
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2012.
Influence of pit removal methods on river network position. Hydrological Processes. 26:1984-1990.
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2012.
The influence of steep regime and germination period on the malting properties of some hull-less barley lines. Journal of the Institute of Brewing. 118:186-191.
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2012.
Inorganic arsenic and basal cell carcinoma in areas of Hungary, Romania, and Slovakia: A case-control study. Environmental Health Perspectives. 120:721-726.
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2012.
Integrating economic and biophysical data in assessing cost-effectiveness of buffer strip placement. Journal of Environmental Quality. 41:380-388.
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2012.
Interactions between profit and welfare on extensive sheep farms. Animal Welfare. 21:57-64.
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2012.
Investigating riparian margins for vegetation patterns and plant-environment relationships in northeast Scotland. Journal of Environmental Quality. 41:364-372.
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2012.
Lipophilic components in black currant seed and pomace extracts. European Journal of Lipid Science and Technology. 114:575-582.
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2012.
Long-term dynamics of soil C and N in intensive rice-based cropping systems of the Indo-Gangetic Plains (IGP): A modelling approach. Ecological Modelling. 232:40-63.
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2012.
Lotus japonicus ARPC1 is required for rhizobial infection. Plant Physiology. 160:917-928.
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2012.
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2012.
Mapping of earthworm distribution for the British Isles and Eire highlights the under-recording of an ecologically important group. Biodiversity and Conservation. 21:475-485.
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2012.
A mathematical model of mucilage expansion in myxospermous seeds of Capsella bursa-pastoris L. Medic (shepherd's purse). Annals of Botany. 109:419-427.
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2012.
Mechanisms underlying the anti-proliferative effects of berry components in in vitro models of colon cancer. Current Pharmaceutical Biotechnology. 13:200-209.
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2012.
Media surface properties and the development of nitrifying biofilms in mixed cultures for wastewater treatment. Process Safety and Environmental Protection. Published online. 91:321-324.
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2012.
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2012.
Mountain forestry policy and strategies in response to climate change challenges: the case of the Ukrainian Carpathians. Journal of Economy and Ecology..
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2012.
Movement protein of hordeivirus interacts in vitro and in vivo with coilin, a major structural protein of Cajal bodies. Doklady Biochemistry and Biophysics. 442:57-60.
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2012.
Multi-level governance: opportunities and barriers in moving to a low-carbon Scotland. Earth and Environmental Science, Transactions of the Royal Society of Edinburgh. 103:175-186.
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2012.
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2012.
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2012.
Mutation of Arabidopsis spliceosomal timekeeper locus 1 causes circadian clock defects. The Plant Cell. 24:4066-4082.
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2012.
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2012.
Neuroprotective effect of blackberry (Rubus sp.) polyphenols is potentiated after simulated gastronintestinal digestion. Food Chemistry. 131:1443-1452.
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2012.
The neuroprotective potential of phenolic-enriched fractions from four juniperus species found in Portugal. Food Chemistry. 135:562-570.
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2012.
A new approach to simulating stream isotope dynamics using Markov switching autoregressive models. Advances in Water Resources. 46:20-30.
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2012.
Nodulation and ecological significance of indigenous legumes in Scotland and Sweden. Symbiosis. 57:133-48.
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2012.
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2012.
Nodulation of legumes from the Thar desert of India and molecular characterization of their rhizobia. Plant and Soil. 357:227-243.
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2012.
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2012.
Nucleoli: Composition, function and dynamics (Review). Plant Physiology. 158:44-51.
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2012.
Of organic farmers and "good farmers": changing habitus in rural England. Journal of Rural Studies. 28:232-240.
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2012.
The oomycete broad-host-range pathogen Phytophthora capsici. Molecular Plant Pathology. 13:329-337.
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2012.
Opportunities for improving phosphorus-use efficiency in crop plants. New Phytologist. 195:306-320.
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2012.
Over-seasons analysis of quantitative trait loci affecting phenolic content and antioxidant capacity in raspberry. Journal of Agricultural and Food Chemistry. 60:5360-5366.
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2012.
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2012.
The Ph1 locus suppresses Cdk2-type activity during premeiosis and meiosis in wheat. The Plant Cell. 24:152-162.
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2012.
Phosphorus retention and remobilization in vegetated buffer strips: a review. Journal of Environmental Quality. 41:389-399.
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2012.
Phylogenetic distribution of genes encoding beta-glucuronidase activity in human colonic bacteria and the impact of diet on faecal glycosidase activities. Environmental Microbiology. 14:1876-1887.
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2012.
A physical, genetic and functional sequence assembly of the barley genome. Nature. 491:711-716.
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2012.
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2012.
A potential loss of carbon associated with greater plant growth in the European Arctic. Nature Climate Change. 2:875-879.
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2012.
Powdery scab resistance in Solanum tuberosum: an assessment of cultivar x environment effect. Plant Pathology. 61:29-36.
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2012.
Present opportunities for sustainable and multifunctional forest management for the development of rural areas. L’Italia Forestale e Montana. 67:147-160.
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2012.
Private woodland owners' perspectives on multifunctionality in English woodlands. Journal of Rural Studies. 28:95-106.
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2012.
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2012.
Proteome-determined type-specific proteins of Mycobacterium avium subspecies paratuberculosis. Veterinary Microbiology. 158:153-162.
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2012.
Quantifying the sources of variability in equine faecal egg counts: implications for improving the utility of the method. Veterinary Parasitology. 188:120-126.
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2012.
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2012.
Quantitative trait loci and candidate loci for heading date in a large population of a wide barley cross. Crop Science. 52:2469-2480.
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2012.
Raspberry viruses manipulate the behaviour of their insect vectors. Entomologia Experimentalis et Applicata. 144:56-68.
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2012.
Re-mating across years and intralineage polygyny are associated with greater than expected levels of inbreeding in wild red deer. Journal of Evolutionary Biology. 25:2457-2469.
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2012.
Recovering phosphorus from soil - A root solution? Environmental Science and Technology. 46:1977-1978.
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2012.
Relationships between climate, water resources, land use and diffuse pollution and the significance of uncertainty in climate change. Journal of Hydrology. 434:19-35.
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2012.
Relationships between soil physicochemical, microbiological properties, and nutrient release in buffer soils compared to field soils. Journal of Environmental Quality. 41:400-409.
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2012.
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2012.
Return of the gentleman farmer?: conceptualising gentrification in UK agriculture Journal of Rural Studies. 28:568-576.
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2012.
A review of the role of excess soil moisture conditions in constraining farm practices under Atlantic conditions. Soil Use and Management. 28:580-589.
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2012.
Revisiting herbage sample collection and preparation procedures to minimise risks of trace element contamination. European Journal of Agronomy. 43:33-39.
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2012.
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2012.
Riparian buffer strips as a multifunctional management tool in agricultural landscapes: introduction. Journal of Environmental Quality. 41:297-303.
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2012.
Risk perception - Issues for flood management in Europe. Natural Hazards and Earth System Sciences. 12:2299-2309.
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2012.
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2012.
The role of free radicals in brassica-induced anaemia of sheep: an ESR spin trapping study. Asian-Australiasian Journal of Animal Sciences. 25:1404-1410.
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2012.
The role of parental behaviour for the development of behaviour specific environmental norms - the example of recycling and re-use behaviour. Journal of Environmental Psychology. 32:277-284.
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2012.
The role of secretion systems and small molecules in soft-rot enterobacteriaceae pathogenicity. Annual Review of Phytopathology. 50:425-449.
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2012.
Science into practice - how can fundamental science contribute to better management of grasslands for invertebrates? Insect Conservation and Diversity. 5:1-8.
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2012.
The scope of the land-based sector to mitigate climate change in North-east Scotland: opportunities and challenges with particular reference to the role of forests. International Journal of Environment and Sustainable Development.. 11:274-292.
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2012.
Seasonal bryophyte productivity in the sub-Arctic: a comparison with vascular plants. Functional Ecology. 26:365-378.
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2012.
Selenium concentrations in national inventory soils from Scotland and Sweden and their relationships with geochemical factors. Journal of Geochemical Exploration. 121:4-14.
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2012.
Seroprevalence of chlamydial infection in cattle in Ireland. Veterinary Journal. 193:583-585.
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2012.
Soil information in support of policy making and awareness raising. Current Opinion in Environmental Sustainability. 4:1-7.
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2012.
Soil strength and macropore volume limit root elongation rates in many UK agricultural soils. Annals of Botany. 110:259-270.
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2012.
Soil tillage effects on the efficacy of cultivars and their mixtures in winter barley. Field Crops Research. 128:91-100.
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2012.
SPICY: towards automated phenotyping of large pepper plants in the greenhouse. Functional Plant Biology. 39:870-877.
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2012.
Stabilisation of soil against wind erosion by six saprotrophic fungi. Soil Biology and Biochemistry. 50:134-141.
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2012.
A superfamily of actin-binding proteins at the actin-membrane nexus of higher plants. Current Biology. 22:1595-1600.
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2012.
A survey of the trichostrongylid nematode species present on UK sheep farms and associated anthelmintic control practices. Veterinary Parasitology. 189:299-307.
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2012.
Systems approaches in global change and biogeochemistry research. Philosophical Transactions of the Royal Society. Series B. Biological Sciences.. 367:311-321.
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2012.
A systems biology view of responses to lignin biosynthesis perturbations in Arabidopsis. The Plant Cell. 24:3506-3529.
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2012.
The Tarland Catchment Initiative and its effect on stream water quality and macroinvertebrate indices. Journal of Environmental Quality. 41:314-321.
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2012.
The TGB1 movement protein of potato virus X reorganises actin and endomembranes into the X--body, a viral replication factory. Plant Physiology. 158:1359-1370.
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2012.
The tomato genome sequence provides insights into fleshy fruit evolution. Nature. 485:635-641.
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2012.
Top 10 plant pathogenic bacteria in molecular plant pathology. Molecular Plant Pathology. 13:614-629.
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2012.
Transcriptional response of Pseudomonas aeruginosa to a phosphate-deficient Lolium perenne rhizosphere. Plant and Soil. 359:25-44.
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2012.
Transcriptome survey reveals increased complexity of the alternative splicing landscape in Arabidopsis. Genome Research. 22:1184-1195.
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2012.
Transparent soil for imaging the rhizosphere. PLoS ONE. 7:e44276.
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2012.
Triggering change: towards a conceptualisation of major change processes in farm decision-making. Journal of Environmental Management. 104:142-151.
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2012.
Understanding people's ideas on natural resource management: research on social representations of nature. Society and Natural Resources.. 25:1167-1181.
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2012.
Use of artificial drinkers by unhandled semi-feral ponies. Applied Animal Behaviour Science. 139:86-95.
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2012.
Using isotopic fractionation to link precursor to product in the synthesis of (±)-mephedrone. A new tool for combating 'legal high' drugs. Analytical Chemistry. 84:8691-8696.
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2012.
Variation, across environments within the UK, in grain protein and grain hardness, in wheat varieties of differing distilling quality. Field Crops Research. 127:146-152.
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2012.
(De-) legitimising hunting - discourses over the morality of hunting in Europe and Eastern Africa. Land Use Policy. 32:261-270.
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2013.
Accounting for false positive detection error induced by transient individuals. Wildlife Research. 40:490-498.
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2013.
Acid-extractable potassium in agricultural soils: Source minerals according by differential and quantitative x-ray diffraction. Journal of Plant Nutrition and Soil Science. 176:407-419.
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2013.
The age of CO2 released from soils in contrasting ecosystems during the arctic winter. Soil Biology and Biochemistry. 63:1-4.
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2013.
Alpine cushion plants inhibit the loss of phylogenetic diversity in severe environments. Ecology Letters. 16:478-486.
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2013.
Alternative splicing at the intersection of biological timing, development, and stress responses. The Plant cell. 25:3640-3656.
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2013.
Anchoring and ordering NGS contig assemblies by population sequencing (POPSEQ). Plant Journal. 76:718-727.
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2013.
Anthocyanin-enriched bilberry and blackcurrant extracts modulate amyloid precursor protein processing and alleviate behavioral abnormalities in the APP/PS1 mouse model of Alzheimer's disease. Journal of Nutritional Biochemistry. 24:360-370.
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2013.
Anticipating and managing future trade-offs and complementarities between ecosystem services. Ecology and Society, 18, 5..
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2013.
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2013.
Azoarcus olearius sp.nov., a nitrogen-fixing bacterium isolated from oil-contaminated soil. International Journal of Systematic and Evolutionary Microbiology. 63:3755-3761.
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2013.
Bacterial communities' response to microcystins exposure and nutrient availability: Linking degradation capacity to community structure. International Biodeterioration and Biodegradation. 84:111-117.
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2013.
Barley whole exome capture: a tool for genomic research in the genus Hordeum and beyond. Plant Journal. 76:494-505.
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2013.
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2013.
Biodegradability of natural dissolved organic matter collected from a UK moorland stream. Water Research. 47:1169-1180.
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2013.
Breeding low-glycemic index barley for functional food. Field Crops Research. 154:31-39.
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2013.
Burkholderia diazotrophica sp. nov., isolated from root nodules of Mimosa spp. International Journal of Systematic and Applied Microbiology. 63:435-441.
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2013.
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2013.
Caffeoyl Shikimate Esterase (CSE) is an enzyme in the lignin biosynthetic pathway. Science. 341:1103-1106.
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2013.
Can Organic Farmers Be 'Good Farmers'? Adding the 'taste of necessity' to the conventionalization debate Agriculture and Human Values. 30:429-441.
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2013.
Changes in ecosystem structure, function and hydrological connectivity control water, soil and carbon losses in semi-arid grass to woody vegetation transitions. Earth Surface Processes and Landforms. 38:1602-1611.
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2013.
Characterisation of Phytophthora inundata according to host range, morphological variation and multigene molecular phylogeny. Phytopathologia Mediterranea. 52:46-65.
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2013.
Characterization of cell death inducing Phytophthora capsici CRN effectors suggests diverse activities in the host nucleus. Frontiers in Plant Science. 4
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2013.
Characterization of three novel desaturases involved in the delta-6 desaturation pathways for polyunsaturated fatty acid biosynthesis from Phytophthora infestans. Applied Microbiology and Biotechnology. 97:7689-7697.
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2013.
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2013.
The concept and measurement of importance: a comment on Rees et al. 2012. Journal of Ecology. 101:1369-13789.
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2013.
Considering the source: Commercialisation and trust in agri-environmental information and advisory services in England. Journal of Environmental Management. 118:96-205.
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2013.
Construction of reference chromosome-scale Pseudomolecules for potato: integrating the potato genome with genetic and physical maps. G3-Genomes Genomes Genetics. 3:2031-2047.
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2013.
Contributions of roots and rootstocks to sustainable, intensified crop production. Journal of Experimental Botany. 64:1209-1222.
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2013.
Control of fruit quality traits in red raspberry, a review from the James Hutton Institute. Aspects of Applied Biology. 119:1-16.
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2013.
A cost-effectiveness analysis of water security and water quality: impacts of climate and land-use change on the River Thames system. Philosophical Transactions of the Royal Society, Series A. 371:201204B.
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2013.
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2013.
Cyanobacterial nitrogen fixation in association with feather mosses: moss as boss? New Phytologist. 200:5-6.
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2013.
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2013.
Declining incidence of multi-trunking over time in a Scottish plantation of Picea sitchensis. Scandinavian Journal of Forest Research. 28:17-27.
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2013.
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2013.
Direct and indirect interactions co-determine species composition in nurse plant systems. Oikos. 122:1371-1379.
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2013.
Downward migration of radiocaesium in organic soils across a transect in Scotland. Journal of Environmental Radioactivity. 115:124-133.
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2013.
Draft Genome Sequences of 17 isolates of the plant pathogenic bacterium Dickeya. Genome Announcements. 1:e00978-13.
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2013.
Draft genome sequences of four Dickeya dianthicola and four Dickeya solani strains. Genome Announcements. 1:e0087-12.
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2013.
Dynamic localization of two tobamovirus ORF6 proteins involves distinct organellar compartments. Journal of General Virology. 94:230-240.
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2013.
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2013.
An economic analysis of the establishment of forest plantations in the United Kingdom to mitigate climatic change. Forest Policy and Economics. 26:34-42.
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2013.
Editor's choice: Evaluating the potential for adverse interactions within genetically engineered breeding stacks. Plant Physiology. 161:1587-1594.
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2013.
Elucidating phytochemical production in Juniperus sp.: seasonality and response to stress situations. Journal of Agricultural and Food Chemistry. 61:4044-4052.
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2013.
Emergence of 13_A2 blue lineage of Phytophthora infestans was responsible for severe outbreaks of late blight on tomato in South-West India. Journal of Phytopathology. 161:49-58.
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2013.
Environmental and seasonal influences on red raspberry flavour volatiles and identification of quantitative trait loci (QTL) and candidate genes. Theoretical and Applied Genetics. 126:33-48.
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2013.
Environmental change impacts on the C- and N-cycle of European forests: a model comparison study. Biogeosciences. 10:1751-1773.
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2013.
Estimating the contribution of rural land uses to greenhouse gas emissions: A case study for North East Scotland. Environmental Science and Policy. 25:36-49.
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2013.
An evaluation of the IDEEA (TM) activity monitor for estimating energy expenditure. British Journal of Nutrition. 109:173-183.
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2013.
Ex-ante analysis of the regional impacts of the Common Agricultural Policy: a rural-urban recursive dynamic CGE model approach. European Planning Studies. Published online..
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2013.
Exploitation of interspecific diversity for monocot crop improvement. Heredity. 110:475-483.
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2013.
Exposure to chemical cocktails before or after conception - the effect of timing on ovarian function. Molecular and Cellular Endocrinology. 376:156-172.
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2013.
Farm household interactions with local economies: A comparison of two EU case study areas. Land Use Policy. 31:156-165.
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2013.
FR-H3: a new QTL to assist in the development of fall-sown barley with superior low temperature tolerance. Theoretical and Applied Genetics. 126:335-347.
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2013.
From north to south: a latitudinal look at legume nodulation processes. South African Journal of Botany. 89:31-41.
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2013.
Fungal biotransformation of zinc silicate and sulfide mineral ores. Environmental Microbiology. 15:2173-2186.
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2013.
Genetic and environmental effects on tannin composition in strawberry (Fragaria x ananassa) cultivars grown in different European locations. Journal of Agricultural and Food Chemistry. 61:790-800.
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2013.
Genetic and QTL analyses of yield and a set of physiological traits in pepper. Euphytica. 190:181-201.
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2013.
Genetic diversity in caribou linked to past and future climate change. Nature Climate Change. 4:132-137.
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2013.
Genomic variations associated with attenuation in Mycobacterium avium subsp paratuberculosis vaccine strains. BMC Microbiology, 13, Article No.11..
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2013.
The global nitrogen cycle in the twenty-first century: introduction. Philosophical Transactions of the Royal Society, B. 368:ArticleNo.20130165..
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2013.
Gradients in fracture force and grazing resistance across canopy layers in seven tropical grass species. Grass and Forage Science. 68:278-287.
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2013.
High prevalence of paratuberculosis in rabbits is associated with difficulties in controlling the disease in cattle. Veterinary Journal. 198:267-270.
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2013.
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2013.
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2013.
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2013.
Identification of genes in the VirR regulon of Pectobacterium atrosepticum and characterization of their roles in quorum sensing-dependent virulence. Environmental Microbiology. 15:687-701.
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2013.
Identification of quantitative trait loci for cane splitting in red raspberry (Rubus idaeus). Molecular Breeding. 31:111-122.
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2013.
Identification of the domains of Cauliflower mosaic virus protein P6 responsible for the suppression of RNA-silencing and salicylic acid-signaling. Journal of General Virology. 94:2777-2789.
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2013.
Identification of the phenolic components in Bulgarian raspberry cultivars by LC-ESI-MSn. International Journal of Agricultural Science Research. 3:127-137.
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2013.
Identifying environmental drivers of insect phenology across space and time: Culicoides in Scotland as a case study. Bulletin of Entomological Research. 103:155-170.
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2013.
The impact of increased food availability on survival of a long-distance migratory bird. Ecology. 94:221-230.
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2013.
Implications of shifts in coffee production on tree species richness, composition and structure on small farms around Mount Kenya. Biodiversity and Conservation. 22:2919-2936.
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2013.
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2013.
Incorporating weather sensitivity in inventory-based estimates of boreal forest productivity: a meta-analysis of process model results. Ecological Modelling. 260:25-35.
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2013.
Influence of scale on thermal characteristics in a large montane river basin. River Research Applications. 29:403-419.
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2013.
The interactive responses of water quality and hydrology to changes in multiple stressors, and implications for the long-term effective management of phosphorus. Science of the Total Environment. 454:230-244.
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2013.
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2013.
Interrogating participatory catchment organisations: cases from Canada, New Zealand, Scotland and the Scottish-English Borderlands. Geographical Journal. 179:234-247.
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2013.
An invasive Mimosa in India does not adopt the symbionts of its native relatives. Annals of Botany. 112:179-186.
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2013.
Knowledge Exchange: a review and research agenda for environmental management. Environmental Conservation. 40:19-36.
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2013.
Knowledge management for land degradation monitoring and assessment: an analysis of contemporary thinking. Land Degradation and Development. 24:307-322.
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2013.