Skip to navigation Skip to content

Publications list

Found 1274 results

Filters: First Letter Of Last Name is T  [Clear All Filters]
2008
Abad P, Gouzy J, Aury JM, Castagnone-Sereno P, Danchin EGJ, Deleury E, Perfus-Barbeoch L, Anthouard V, Artiguenave F, Blok VC et al..  2008.  Genome sequence of the metazoan plant-parasitic nematode Meloidogyne incognita. Nature Biotechnology. 26:909-915.
Kroghsbo S, Madsen C, Poulsen M, Schroder M, Kvist PH, Taylor MA, Gatehouse A, Shu Q, Knudsen I.  2008.  Immunotoxicological studies of genetically modified rice expressing PHA-E lectin or Bt toxin in Wistar rats. Toxicology. 245:24-34. Abstract
Wheaton AD, McKenzie BM, Tisdall JM.  2008.  Management to increase the depth of soft soil improves soil conditions and grapevine performance in an irrigated vineyard. Soil and Tillage Research. 98:68-80. Abstract
Comadran J, Russell JR, van Eeuwijk FA, Ceccarelli S, Grando S, Baum M, Stanca AM, Pecchioni N, Mastrangelo AM, Akar T et al..  2008.  Mapping adaptation of barley to droughted environments. Euphytica. 161:35-45. Abstract
Giuliano G, Tavazza R, Diretto G, Beyer P, Taylor MA.  2008.  Metabolic engineering of carotenoid biosynthesis in plants. Trends in Biotechnology. 26:139-145. Abstract
Morris WL, Ducreux LJM, Bryan GJ, Taylor MA.  2008.  Molecular dissection of sensory traits in the potato tuber. American Journal of Potato Research. 85:286-297.
Nonyane BAS, Theobold CM.  2008.  Multiplicative models for combining information from several sensory experiments: A Bayesian analysis. Food Quality and Preference. 19:260-266. Abstract
Dennis PG, Miller AJ, Clark IM, Taylor RG, Valsami-Jones E, Hirsch PR.  2008.  A novel method for sampling bacteria on plant root and soil surfaces at the microhabitat scale. Journal of Microbiological Methods. 75:12-18. Abstract
Baccini M, Bachmaier EM, Biggeri A, Boekschoten MV, Bouwman FG, Brennan L, Caesar R, Cinti S, Coort SL, Crosley K et al..  2008.  The NuGO proof of principle study package: a collaborative research effort of the European Nutrigenomics Organisation. Genes and Nutrition. 3:147-151.
Stark LA, Taliansky ME.  2008.  Old and new faces of the nucleolus. Workshop on the nucleolus and disease. EMBO Reports. 10:35-40. Abstract
Blok VC, Jones JT, Phillips MS, Trudgill DL.  2008.  Parasitism genes and host range disparities in biotrophic nematodes: the conundrum of polyphagy versus specialism. Bioessays. 30:249-259. Abstract
Canetta E, Kim S-H, Kalinina NO, Shaw J, Adya AK, Gillespie T, Brown JWS, Taliansky ME.  2008.  A plant virus movement protein forms ringlike complexes with the major nucleolar protein, fibrillarin, in vitro. Journal of Molecular Biology. 376:932-937. Abstract
Liu H, Coulthurst SJ, Pritchard L, Hedley PE, Ravensdale M, Humphris SN, Burr T, Takle GW, Brurberg MB, Birch PRJ et al..  2008.  Quorum sensing coordinates brute force and stealth modes of infection in the plant pathogen Pectobacterium atrosepticum. PLoS Pathogens. 4:-e1000093. Abstract
Broadley MR, Hammond JP, King GJ, Astley D, Bowen HC, Meacham MC, Mead A, Pink DAC, Teakle G, Hayden R et al..  2008.  Shoot calcium and magnesium concentrations differ between subtaxa, are highly heritable, and associate with potentially pleiotropic loci in Brassica oleracea. Plant Physiology. 146:1707-1720. Abstract
Griffiths BS, Caul S, Thompson J, Hackett CA, Cortet J, Pernin C, Krogh PH.  2008.  Soil microbial and faunal responses to herbicide tolerant maize and herbicide in two soils. Plant and Soil. 308:93-103. Abstract
Tilston EL, Halpin C, Hopkins DW.  2008.  Tissue culture propagation alters plant-microbe interactions in tobacco rhizosphere. Biology and Fertility of Soils. 44:897-901. Abstract
Chichkova NV, Galiullina RA, Taliansky ME, Vartapetian AB.  2008.  Tissue disruption activates a plant caspase-like protease with TATD cleavage specificity. Plant Stress. 2:89-95. Abstract
Druka A, Druka I, Centeno AG, Li H, Sun Z, Thomas WTB, Bonar N, Steffenson BJ, Ullrich SE, Kleinhofs A et al..  2008.  Towards systems genetic analyses in barley: Integration of phenotypic, expression and genotype data into GeneNetwork. BMC Genetics. 9:-73. Abstract
Titlyanov EA, Kiyashko SI, Titlyanova TV, Kalita TL, Raven JA.  2008.  δ13C and δ15N values in reef corals Porites lutea and P. cylindrica and in their epilithic and endolithic algae. Marine Biology. 155:353-361. Abstract
2009
Tingem M, Rivington M, Bellocchi G.  2009.  Adaptation assessments for crop production in response to climate change in Cameroon. Agronomy for Sustainable Development.. 29(2):247-256.
Demars BOL, Tremolieres M.  2009.  Aquatic macrophytes as bioindicators of carbon dioxide in groundwater fed rivers. The Science of the Total Environment. 407(16):4752-4763.
Britton AJ, Beale CM, Towers W, Hewison RL.  2009.  Biodiversity gains and losses: evidence for homogenisation of Scottish alpine vegetation. Biological Conservation. 142:1728-1739.
Irvine RJ, Fiorini S, McLeod J, Turner A, van der Wal R, Armstrong H, Yearley S, White PCL.  2009.  Can managers inform models? Integrating local knowledge into models of red deer habitat use Journal of Applied Ecology. 46(2):344-352.
Townsend SE, Newey SJ, Thirgood SJ, Matthews L, Haydon DT.  2009.  Can parasites drive population cycles in mountain hares? Proceedings of the Royal Society of London, B. 276(1662):1611-1617.
Bodeker ITM, Nygren CMR, Taylor AFS, Olson A, Lindahl BD.  2009.  ClassII peroxidase-encoding genes are present in a phylogenetically wide range of ectomycorrhizal fungi. ISME Journal. 3(12):1387-1395.
Bodecker ITM, Nygren CMR, Taylor AFS, Olson A, Lindahl BD.  2009.  ClassII peroxidase-encoding genes are present in a phylogenetically wide range of ectomycorrhizal fungi Ectomycorrhizal ClassII peroxidase-encoding genes. The ISME Journal. 3:1387-1395.
Potts JM, Chapman SJ, Towers W, on values Campbell C 'BCD, change in thesoil, implications for monitoring' by R.M. Lark BPH, of Science KEJSGJD.  2009.  Comments on 'Baseline values and change in the soil, and implications for monitoring' by R.M. Lark, P.H. Bellamy and G.J.D. Kirk. European Journal of Soil Science. 60:481-483.
Aalders IH, Ball B, Black HIJ, Campbell CD, Griffiths B, Hopkins D, Hough RL, Lilly A, McKenzie B, Rees RM et al..  2009.  Considerations for Scottish soil monitoring in the European context. European Journal of Soil Science. 60(5):833-843.
Tingem M, Rivington M, Bellocchi G, Azam-Ali S, Colls J.  2009.  Crop yield model validation for Cameroon. Theoretical and Applied Climatology. 96(3-4):275-280.
White RM, Fischer A, Marshall K, Travis J, Webb TJ, di Falco S, Redpath S, van der Wal R.  2009.  Developing an integrated conceptual framework to understand biodiversity conflicts. Land Use Policy. 26(2):242-253.
Babulo B, Muys B, Nega F, Tollens E, Nyssen J, Deckers J, Mathijs E.  2009.  The economic contribution of forest resource use to rural livelihoods in Tigray, Northern Ethiopia. Forest Policy and Economics. 11(2):123-131.
Wu G, Liu Z, Du G, Thirgood SJ.  2009.  Effect of fencing and grazing on Kobresia-dominated meadow in the Qinghai-Tibetan Plateau, China. Plant and Soil. 319(1-2):115-126.
Watts EJ, Palmer SCF, Bowman AS, Irvine RJ, Smith A, Travis JMJ.  2009.  The effect of host movement on viral transmission dynamics in a vector-borne disease system. Parasitology. 136(10):1221-1234.
Omsjoe EH, Stien A, Irvine RJ, Albon SD, Dahl E, Thoresen SI, Rustad E, Ropstad E.  2009.  Evaluating capture stress and its effects on reproductive success in Svalbard reindeer. Canadian Journal of Zoology. 87(1):73-85.
Harris G, Thirgood, S.J.; Redpath S, Hopcraft G, Berger J.  2009.  Global decline in aggregated migrations of large terrestrial mammals. Endangered Species Research. 7:55-76.
Redpath SM, Thirgood SJ.  2009.  Hen harriers and red grouse: moving towards consensus? Journal of Applied Ecology. 46(5):961-963.
Tetzlaff D, Seibert J, McGuire K, Laudon H, Burns D, Dunn SM, Soulsby C.  2009.  How does landscape structure influence catchment transit time across different geomorphic provinces? Hydrological Processes. 23(6):945-953.
Hodgkins R, Cooper R, Wadham J, Tranter M.  2009.  The hydrology of the proglacial zone of a high-Arctic glacier (Finsterwalderbreen, Svalbard): Atmospheric and surface water fluxes. Journal of Hydrology. 378(1-2):150-160.
Ode A, Fry G, Tveit M, Messager P, Miller D.  2009.  Indicators of perceived naturalness as drivers of landscape preference. Journal of Environmental Management. 90(1):375-383.
Pakeman RJ, Pugnaire F, Michalet R, Lortie C, Schiffers K, Maestre F, Travis J.  2009.  Is the cask of facilitation ready for bottling? A symposium on the connectivity and future directions of positive plant interactions Biology Letters. 5(5):577-579.
Fortunel C, Garnier E, Joffre R, Kazakou E, Quested H, Grigulis K, Lavorel S, Ansquer P, Castro H, Cruz P et al..  2009.  Leaf traits capture the effects of land use changes and climate on litter decomposability of grasslands across Europe. Ecology. 90(3):598-611.
Trinder CJ, Johnson D, Artz RRE.  2009.  Litter type, but not plant cover, regulates initial litter decomposition and fungal community structure in recolonising cutover peatlands. Soil Biology and Biochemistry. 41(3):651-655.
Thirgood SJ.  2009.  New perspectives on managing wildlife diseases. Journal of Applied Ecology.. 46(2):454-456.
Macdonald CA, Thomas N, Robinson L, Tate KR, Ross DJ, Dando J, Singh BK.  2009.  Physiological, biochemical and molecular responses of soil microbial community after afforestation of pastures with Pinus radiata. Soil Biology and Biochemistry. 41(8):1642-1651.
Frogbrook ZL, Bell J, Bradley RI, Evans C, Lark RM, Reynolds B, Smith P, Towers W.  2009.  Quantifying terrestrial carbon stocks: examining the spatial variation in two upland areas in the UK and a comparison to mapped estimates of soil carbon. Soil Use and Management. 25(3):320-332.
Singh BK, Tate K, Ross D, Dando J, Singh J, Thomas N, Millard P, Murrell JC.  2009.  Soil methane oxidation and methanotroph responses to afforestation of pastures with Pinus radiata stands of different ages. Soil Biology and Biochemistry.. 41:2196-2205.
Ferrera R, Trevisol P, Acutis M, Rana G, Richter G, Baggaley NJ.  2009.  Topographic impacts on wheat yields under climate change: two contrasted case studies in Europe. Theoretical and Applied Climatology. Published online.
Hrachowitz M, Soulsby C, Tetzlaff D, Dawson JJC, Dunn SM, Malcolm IA.  2009.  Using long-term data sets to understand transit times in contrasting headwater catchments. Journal of Hydrology. 367(3-4):237-248.
Terzi LC, Simpson GG.  2009.  Arabidopsis RNA immunoprecipitation. Plant Journal. 59:163-168.
Antunez-Lamas M, Cabrera E, Lopez-Solanilla E, Solano R, Gonzalez-Melendi P, Chico JM, Toth IK, Birch PRJ, Pritchard L, Liu H et al..  2009.  Bacterial chemoattraction towards jasmonate plays a role in the entry of Dickeya dadantii through wounded tissues. Molecular Microbiology. 74:662-671.
Subbarao GV, Kishii M, Nakahara K, Ishikawa T, Ban T, Tsujimoto H, George TS, Berry WL, Hash CT, Ito O.  2009.  Biological nitrification inhibition (BNI) - Is there potential for genetic interventions in Triticeae? Breeding Science. 59:529-545.
Adam MAM, Phillips MS, Tzortzakakis M, Blok VC.  2009.  Characterisation of mjap genes encoding novel secreted proteins from the root-knot nematode, Meloidogyne javanica. Nematology. 11:253-265.
Barker H, McGeachy KD, Toplak N, Gruden K, Zel J, Browning I.  2009.  Comparison of genome sequence of PVY isolates with biological properties. American Journal of Potato Research. 86:227-238.
Cockell CS, L A, Fridlund M, Herbst TM, Kaltenegger L, Absil O, Beichman C, Benz W, Blanc M, Brack A et al..  2009.  Darwin - a mission to detect and search for life on extrasolar planets. Astrobiology. 9:1-22.
McKenzie BM, Bengough AG, Hallett PD, Thomas WTB, Forster BP, McNicol JW.  2009.  Deep rooting and drought screening of cereal crops: A novel field-based method and its application.. Field Crops Research. 112:165-171. Abstract
Makarov VV, Rybakova EN, Efimov AV, Dobrov EN, Serebryakova MV, Solovyev AG, Yaminsky IV, Taliansky ME, Morozov SV, Kalinina NO.  2009.  Domain organization of the N-terminal portion of hordeivirus movement protein TGBp1. Journal of General Virology. 90:3022-3032.
Thiel T, Graner A, Waugh R, Grosse I, Close TJ, Stein N.  2009.  Evidence and evolutionary analysis of ancient whole-genome duplication in barley predating the divergence from rice. BMC Evolutionary Biology. 9:-209.
Cole C, Sobala A, Lu C, Thatcher SR, Bowman A, Brown JWS, Green PJ, Barton GJ, Hutvagner G.  2009.  Filtering of deep sequencing data reveals the existence of abundant Dicer-dependent small RNAs derived from tRNAs. RNA. 15:2147-2160.
Al-Mrabeh A, Ziegler A, Cowan GH, Torrance L.  2009.  A fully recombinant ELISA using in vivo biotinylated antibody fragments for the detection of Potato leaf roll virus. Journal of Virological Methods. 159:200-205.
Haas BJ, Kamoun S, Zody MC, Jiang RHY, Handsaker RE, Cano LM, Grabherr M, Kodira CD, Raffaele S, Torto-Alalibo T et al..  2009.  Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans. Nature. 461:393-398.
Jones JT, Kumar A, Pylypenko LA, Thirugnanasambandam A, Castelli L, Chapman S, Cock PJA, Grenier E, Lilley CJ, Phillips MS et al..  2009.  Identification and functional characterisation of effectors in expressed sequence tags from various life cycle stages of the potato cyst nematode Globodera pallida. Molecular Plant Pathology. 10:815-828.
Rakhshanderhoo F, Takeshita M, Squires J, Palukaitis P.  2009.  The influence of RNA-dependent RNA polymerase 1 on Potato virus Y infection and on other antiviral response genes. Molecular Plant-Microbe Interactions. 22:1312-1318.
Mahajan A, Currie CG, Mackie S, Tree J, McAteer S, McKendrick I, McNeilly TN, Roe A, La Ragione RM, Woodward MJ et al..  2009.  An investigation of the expression and adhesin function of H7 flagella in the interaction of Escherichia coli O157:H7 with bovine intestinal epithelium. Cellular Microbiology. 11:121-137.
Torres-Ca P, Hinojosa MB, Garcia-Ruiz R, Daniell TJ, Carreira JA.  2009.  Linking biogeochemical variability and microbial community structure in forest soils: Abies pinsapo-fir forests as a study case. Ecosistemas. 18:91-102.
Dennis PG, Hirsch PR, Smith SJ, Taylor RG, Valsami-Jones E, Miller AJ.  2009.  Linking rhizoplane pH and bacterial density at the microhabitat scale. Journal of Microbiological Methods. 76:101-104.
Pritchard L, Liu H, Booth C, Douglas E, Fran P, Schrenzel J, Hedley PE, Birch PRJ, Toth IK.  2009.  Microarray comparative genomic hybridisation analysis incorporating genomic organisation, and application to enterobacterial plant pathogens. PLoS Computational Biology. 5:-e1000473.
Blower TR, Fineran PC, Johnson MJ, Toth IK, Humphreys DP, Salmond GPC.  2009.  Mutagenesis and functional characterisation of the RNA and protein components of the toxIN abortive infection and toxin-antitoxin locus of Erwinia. Journal of Bacteriology. 191:6029-6039.
Comadran J, Thomas WTB, van Eeuwijk FA, Ceccarelli S, Grando S, Stanca AM, Pecchioni N, Akar T, Al-Yassin A, Benbelkacem A et al..  2009.  Patterns of genetic diversity and linkage disequilibrium in a highly structured Hordeum vulgare association-mapping population for the Mediterranean basin. Theoretical and Applied Genetics. 119:175-187.
Debeljak M, Kocev D, Towers W, Jones M, Griffiths BS, Hallett PD.  2009.  Potential of multi-objective models for risk-based mapping of the resilience characteristics of soils: demonstration at a national level. Soil Use and Management. 25:66-77.
Hein I, Birch PRJ, Danan S, Lefebvre V, Odeny DA, Gebhardt C, Trognitz F, Bryan GJ.  2009.  Progress in mapping and cloning qualitative and quantitative resistance against Phytophthora infestans in potato and its wild relatives. Potato Research. 52:215-227.
Ma'shum M, Tisdall JM, Borrell AK, McKenzie BM, Gill JS, Kusnarta IGM, Sukartono M, Van Cooten DE.  2009.  Rice responses to soil management in rice-based cropping system in the semi-arid tropics of southern Lombok, Eastern Indonesia. Field Crops Research. 110:197-206. Abstract
Gregory PJ, Bengough AG, Grinev DV, Schmidt S, Thomas WTB, Wojciechowski T, Young IM.  2009.  Root phenomics of crops - opportunities and challenges. Functional Plant Biology. 36:922-929.
Visser RGF, Bachem CWB, de Boer JM, Bryan GJ, Chakrabati SK, Feingold S, Gromadka R, van Ham RCHJ, Huang SW, Jacobs JME et al..  2009.  Sequencing the potato genome: Outline and first results to come from the elucidation of the sequence of the world's most important food crop. American Journal of Potato Research. 86:417-429.
Bradshaw JE, Titley M, Wilson RN.  2009.  Single seed descent as a breeding method for swedes (Brassica napus L. var. napobrassica Peterm). Euphytica. 169:387-401.
Tyler A, Hunter PD, Carvalho L, Codd GA, Elliott JA, Ferguson CA, Hanley ND, Hopkins DW, Maberly SC, Mearns KJ et al..  2009.  Strategies for monitoring and managing mass populations of toxic cyanobacteria in recreational waters: A multi-interdisciplinary approach. Environmental Health. 8 Supplement 1:-S11.
Mess A, Squire GR, Perry JN, Angevin F, Gomez M, Townend P, Sausse C, Breckling B, Langrell S, Dzeroski S et al..  2009.  Sustainable introduction of GM crops into European agriculture: a summary report of the FP6 SIGMEA research project. Ol. 16:37-51.
Pearce MC, Chase-Topping ME, McKendrick IJ, Mellor DJ, Locking ME, Allison L, Ternent HE, Matthews L, Knight HI, Smith AW et al..  2009.  Temporal and spatial patterns of bovine Escherichia coli O157 prevalence and comparison of temporal changes in the patterns of phage types associated with bovine shedding and human E. coli O157 cases in Scotland between 1998-2000 and 2002-2004. BMC Microbiology. 9:-276.
Goodall N, Kisiswa L, Prashar A, Faulkner S, Tokarczuk P, Singh K, Erichsen JT, Guggenheim J, Halfter W, Wride MA.  2009.  Three-dimensional modelling of chick embryo eye development and growth using high resolution magnetic resonance imaging. Experimental Eye Research. 89:511-521.
Birch PRJ, Armstrong MR, Bos J, Boevink P, Gilroy EM, Taylor RM, Wawra S, Pritchard L, Conti L, Ewan R et al..  2009.  Towards understanding the virulence functions of RXLR effectors of the oomycete plant pathogen Phytophthora infestans (Review). Journal of Experimental Botany. 60:1133-1140.
Torrance L, Lukhovitskaya NI, Schepetilnikov MV, Cowan GH, Ziegler A, Savenkov EI.  2009.  Unusual long-distance movement strategies of Potato mop-top virus RNAs in Nicotiana benthamiana. Molecular Plant-Microbe Interactions. 22:381-390.
Swanson MM, Fraser G, Daniell TJ, Torrance L, Gregory PJ, Taliansky ME.  2009.  Viruses in soils: morphological diversity and abundance in the rhizosphere. Annals of Applied Biology. 155:51-60. Abstract
2010
Vinichuk M, Taylor AFS, Rosen K, Johanson KJ.  2010.  Accumulation of potassium, rubidium and caesium (133Cs and 137Cs) in various fractions of soil and fungi in a Swedish forest. The Science of the Total Environment. 408:2543-2548.
Andrist Rangel Y, Hillier S, Oborn I, Lilly A, Towers W, Edwards AC, Paterson E.  2010.  Assessing potassium reserves in northern temperate grassland soils: A perspective based on quantitative mineralogical analysis and aqua-regia extractable potassium. Geoderma. 158(3-4):303-314.
Birkel CB, Dunn SM, Tetzlaff DT, Soulsby CS.  2010.  Assessing the value of high-resolution isotope tracer data in the stepwise development of a lumped conceptual rainfall-runoff model. Hydrological Processes. 24(16):2335-2348.
Lazar A, Butterfield D, Futter MN, Rankinen K, Thouvenot-Korpoo M, Jarrit N, Lawrence DSL, Wade AJ, Whitehead PG.  2010.  An assessment of the fine sediment dynamics in an upland river system: INCA-Sed modifications and implications for fisheries. The Science of the Total Environment. 408(12):2555-2566.
Andersen R, Grasset L, Thormann MN, Rochefort L, Francez AJ.  2010.  Changes in microbial community structure and function following Sphagnum peatland restoration. Soil Biology and Biochemistry. 42(2):291-301.
Munang R, Rivington M, Takle ES, Mackey B, Thiaw I, Liu J.  2010.  Climate information and capacity needs for ecosystem management under a changing climate. Procedia Environmental Sciences. 1:206-227.
Harrison A, Newey SJ, Gilbert L, Haydon DT, Thirgood SJ.  2010.  Culling wildlife hosts to control disease: mountain hares, red grouse and louping ill virus. Journal of Applied Ecology. 46(4):926-930.
Li XQ, Sveshnikov D, Zebarth BJ, Tai H, De Koeyer D, Millard P, Haroon M, Singh M.  2010.  Detection of nitrogen deficiency in potato plants using gene expression markers. American Journal of Potato Research. 87(1):50-59.
MacLeod M, Moran D, Eory V, Rees RM, Barnes A, Topp CFE, Ball B, Hoad S, Wall E, McVittie A et al..  2010.  Developing greenhouse gas marginal abatement cost curves for agricultural emissions from crops and soils in the UK. Agricultural Systems. 103(4):198-209.
Patton V, Ewald J, Smith AA, Newey SJ, Iason GR, Thirgood SJ, Raynor R.  2010.  Distribution of mountain hares (Lepus timidus) in Scotland: results from a questionnaire. Mammal Review. 40(4):313-326.
Waylen KA, Fischer A, McGowan PJK, Thirgood SJ, Milner-Gulland EJ.  2010.  The effect of local cultural context on the success of community-based conservation interventions. Conservation Biology. Published online. 24(4):1119-1129.
Gao-Lin W, Mei-Ru W, Ting G, Tian-Ming H, Davidson G.  2010.  Effects of mowing utilization on forage yield and quality in five oat varieties in alpine area of the eastern Qinghai-Tibetan Plateau. African Journal of Biotechnology. 9(4):461-466.
Silvertown J, Tallowin J, Stevens C, Power SA, Morgan V, Emmett B, Hester AJ, Grime P, Morecroft M, Buxton R et al..  2010.  Environmental myopia: a diagnosis and a remedy. Trends in Ecology and Evolution. 25(10):556-561.
Smith J, Gottschalk P, Bellarby J, Chapman SJ, Lilly A, Towers W, Bell J, Coleman K, Nayak D, Richards M et al..  2010.  Estimating changes in Scottish soil carbon stocks using ECOSSE. I. Model description and uncertainties. Climate Research. 45:179-192.
Smith J, Gottschalk P, Bellarby J, Chapman SJ, Lilly A, Towers W, Bell J, Coleman K, Nayak D, Richards M et al..  2010.  Estimating changes in Scottish soil carbon stocks using ECOSSE. II. Application. Climate Research. 45:179-192.
Smout S, Asseburg C, Matthiopoulos J, Fernandez C, Redpath S, Thirgood SJ, Harwood J.  2010.  The functional response of a generalist predator. PLoS ONE. 5(5):e10761.
Reed MS, Bonn A, Slee W, Beharry-Borg N, Birch J, Brown I, Burt TP, Chapman D, Chapman PJ, Clay G et al..  2010.  The future of the uplands. Land Use Policy.. Suppl.1:S204-S216.
Lin G, Ci HX, Thirgood, S.J.; Redpath S, Zhang TZ, Su JP.  2010.  Genetic variation and molecular evolution of endangered Kozlov's pika (Ochotona Koslowi Buchner) based on mitochondrial cytochrome B gene. Polish Journal of Ecology. 58(3):563-568.
Ross LC, Woodin SJ, Hester AJ, Thompson DBA, Birks HJB.  2010.  How important is plot relocation accuracy when interpreting re-visitation studies of vegetation change? Plant Ecology and Diversity. 3(1):1-8.
McDonnell JJ, McGuire K, Aggarwal KP, Beven K, Biondi D, Destouni G, Dunn S, James A, Kirchner J, Kraft P et al..  2010.  How old is the streamwater? Open questions in catchment transit time conceptualization, modelling and analysis Hydrological Processes. 24(12):1745-1754.
Tetzlaff D, Soulsby C, Birkel C.  2010.  Hydrological connectivity and microbiological fluxes in montane catchments: the role of seasonality and climatic variability. Hydrological Processes. 24(9):1231-1235.
Sutherland WJ, Albon SD, Allison H, Armstrong-Brown S, Bailey MJ, Bereton T, Boyd IL, Carey P, Edwards J, Gill M et al..  2010.  The identification of priority opportunities for UK nature conservation policy. Journal of Applied Ecology. 47(5):955-965.
Wilkinson A, Solan M, Taylor AFS, Alexander IJ, Johnson D.  2010.  Intraspecific diversity regulates fungal productivity and respiration. PLoS ONE. 5(9):e12604.
Atickem A, Williams S, Bekele A, Thirgood SJ.  2010.  Livestock predation in the Bale Mountains, Ethiopia. African Journal of Ecology. 48(4):1076-1082.
Toberman H, Laiho R, Evans CD, Artz RRE, Fenner N, Vavrova P, Freeman C.  2010.  Long-term drainage for forestry inhibits extracellular phenol oxidase activity in Finnish boreal mire peat. European Journal of Soil Science. 61(6):950-957.
Msoffe F, Ogoto J, Bedelian C, Said M, Kifugo S, Reid R, Kaaya J, Neselle M, van Gardingen P, Thirgood SJ.  2010.  Participatory wildlife surveys in communal lands: a case study from Simanjiro, Tanzania. African Journal of Ecology. 8(3):727-735.
Newey SJ, Allison P, Thirgood SJ, Smith AA, Graham IM.  2010.  Population and individual level effects of over-winter supplementary feeding mountain hares. Journal of Zoology. 282(3):214-220.
Turner TL, Bourne EC, von Wettberg EJ, Hu T, Nuzhdin SV.  2010.  Population resequencing reveals local adaptation of Arabidopsis lyrata to serpentine soils. Nature Genetics. 42:260-U42.
Hogberg MN, Briones MJI, Keel SG, Metcalfe DB, Campbell C, Midwood AJ, Thornton B, Hurry V, Linder S, Nasholm T et al..  2010.  Quantification of effects of season and nitrogen supply on tree belowground carbon transfer. New Phytologist. 187(2):485-493.
Vittoz P, Bayfield N, Brooker R, Elston DA, Duff EI, Theurillat JP, Guisan A.  2010.  Reproducibility of species lists, visual cover estimates and frequency methods for recording high-mountain vegetation. Journal of Vegetation Science. 21:1035-1047.
Gastal F, Dawson LA, Thornton B.  2010.  Responses of plant traits of four grasses from contrasting habitats to defoliation and N supply. Nutrient Cycling in Agroecosystems. 88(2):245-258.
Hough RL, Towers W, Aalders IH.  2010.  The risk of peat erosion from climate change: land management combinations: an assessment with bayesian belief networks. Human and Ecological Risk Assessment. 16(5):962-976.
Robinson D, Trinder C, Davidson H, Brooker RW.  2010.  Root-shoot growth responses during interspecific competition quantified using allometric modelling. Annals of Botany. 106(6):921-926.
Kerlin D, Thirgood, S.J.; Redpath S, Miller DR, Aebischer N, Smith A, Haydon D.  2010.  State dependent dynamics of cycles in red grouse abundance. Ecography. 33(5):896-905.
Toftegaard T, Iason GR, Alexander IJ, Rosendahl S, Taylor AFS.  2010.  The threatened plant intermediate wintergreen (Pyrola media Sw.) associates with a wide range of biotrophic fungi in native Scottish pine woods. Biodiversity and Conservation. 19(14):3963-3971.
Travis JMJ, Smith HS, Ranwala SMW.  2010.  Towards a mechanistic understanding of dispersal evolution in plants: conservation implications. Diversity and Distributions. 16(4):690-702.
Dunn SM, Birkel C, Tetzlaff D, Soulsby C.  2010.  Transit time distributions of a conceptual model: their characteristics and sensitivities. Hydrological Processes. 24(12):1719-1729.
Currey PM, Johnson D, Sheppard LJ, Leith ID, Toberman H, van der Wal R, Dawson LA, Artz RRE.  2010.  Turnover of labile and recalcitrant soil carbon differ in response to nitrate and ammonium deposition in an ombrotrophic peatland. Global Change Biology. 16(8):2307-2321.
Troldborg M, Nowak W, Tuxen N, Bjerg PL, Helmig R, Binning PJ.  2010.  Uncertainty evaluation of mass discharge estimates from a contaminated site using a fully Bayesian framework. Water Resources Research. 46(W12552)
Teel T, Manfredo M, Jensen FS, Buijs A, Fischer A, Riepe C, Arlinghaus R, Jacobs M.  2010.  Understanding the cognitive basis for human-wildlife relationships. International Journal of Sociology. 40:104-123.
Abarenkov K, Nilsson RH, Larsson KH, Alexander IJ, Eberhardt U, Erland S, Hoiland K, Kjoller R, Larsson E, Pennanen T et al..  2010.  The UNITE database for molecular identification of fungi - recent updates and future perspectives. New Phytologist. 186(2):281-285.
Newey SJ, Allison P, Thirgood SJ, Smith A, Graham I.  2010.  Using PIT tag technology to target supplementary feeding studies. Wildlife Biology. 15(4):405-411.
Christensen NM, Oparka KJ, Tilsner J.  2010.  Advances in imaging RNA in plants. Trends in Plant Science. 15:196-203.
Schornack S, Van Damme M, Bozkurt TO, Cano LM, Smoker M, Thines M, Gaulin E, Kamoun S, Huitema E.  2010.  Ancient class of translocated oomycete effectors targets the host nucleus. Proceedings of the National Academy of Sciences, USA. 107:17421-17426.
Tavares LR, Fortalezas S, Carrilho C, McDougall GJ, Stewart D, Ferreira RB, Santos CN.  2010.  Antioxidant and antiproliferative properties of strawberry tree tissues. Journal of Berry Research. 1:3-12.
Fortalezas S, Tavares LR, Pimpao RC, Tyagi A, Pontes V, Alves PM, McDougall GJ, Stewart D, Ferreira RB, Santos CN.  2010.  Antioxidant properties and neuroprotective capacity of strawberry tree fruit (Arbutus unedo). Nutrients. 2:214-229.
Ross HA, McDougall GJ, Vincent JFV, Stewart D, Verrall SR, Taylor MA.  2010.  Discerning intra-tuber differences in textural properties in cooked Solanum tuberosum group Tuberosum and group Phureja tubers. Journal of the Science of Food and Agriculture. 90:1527-1532.
Tighe P, Duthie GG, Vaughan N, Brittenden J, Simpson WG, Duthie S, Mutch W, Wahle K, Horgan GW, Thies F.  2010.  Effect of increased consumption of whole-grain foods on blood pressure and other cardiovascular risk markers in healthy middle-aged persons: a randomised controlled trial. American Journal of Clinical Nutrition. 94:733-740.
Tattersall RJ, Prashar A, Singh KD, Tokarczuk PF, Erichsen JT, Hocking PM, Guggenheim JA.  2010.  Ex vivo magnetic resonance imaging of crystalline lens dimensions in chicken. Molecular Vision. 16:144-153.
Berepiki A, Lichius A, Shoji JY, Tilsner J, Read ND.  2010.  F-actin dynamics in Neurospora crassa. Eukaryotic Cell. 9:547-557.
Milne I, Shaw P, Stephen G, Bayer M, Cardle L, Thomas WTB, Flavell AJ, Marshall DF.  2010.  Flapjack - graphical genotype visualization. Bioinformatics. 26:3133-3134.
Stushnoff C, Ducreux LJM, Hancock RD, Hedley PE, Holm DG, McDougall GJ, McNicol JW, Morris J, Morris WL, Sungurtas J et al..  2010.  Flavonoid profiling and transcriptome analysis reveals new gene-metabolite correlations in tubers of Solanum tuberosum L. Journal of Experimental Botany. 61:1225-1238.
Zakri AM, Ziegler A, Torrance L, Fischer R, Commandeur U.  2010.  Generation and characterisation of a scFv against recombinant coat protein of the geminivirus Tomato leaf curl New Delhi virus. Archives of Virology. 155:335-342.
De Maayer P, Chan WY, Venter SN, Toth IK, Birch PRJ, Joubert F, Coutinho TA.  2010.  Genome sequence of Pantoea ananatis LMG20103, the causative agent of Eucalyptus blight and dieback. Journal of Bacteriology. 192:2936-2937.
Richards S, Gibbs RA, Gerardo NM, Moran N, Nakabachi A, Stern D, Tagu D, Wilson ACC, Muzny D, Kovar C et al..  2010.  Genome sequence of the pea aphid Acyrthosiphon pisum. PLOS Biology. 8:-e1000313.
Cockram J, White J, Zuluaga D, Smith D, Comadran J, Macaulay M, Luo ZW, Kearsey MJ, Werner P, Harrap D et al..  2010.  Genome-wide association mapping of morphological traits to candidate gene resolution in the un-sequenced barley genome. Proceedings of the National Academy of Sciences, USA. 107:21611-21616.
Yang S, Peng Q, Zhang Q, Zou L, Li Y, Robert C, Pritchard L, Liu H, Hovey R, Wang Q et al..  2010.  Genome-wide identifiction of HrpL-regulated genes in the necrotrophic phytopathogen Dickeya dadantii 3937. PLoS One. 5:-e13472.
Raven JA, Thomas H.  2010.  Grasses. Current Biology. 20:R837-R839.
Grant OM, Tronina L, Ramalho JC, Besson CK, Lobo-Do-Vale R, Pereira JS, Jones HG, Chaves MM.  2010.  The impact of drought on leaf physiology of Quercus suber L. trees: comparison of an extreme drought event with chronic rainfall reduction. Journal of Experimental Botany. 61:4361-4371.
Stroud JL, Li HF, Lopez-Bellido FJ, Broadley MR, Foot I, Fairweather-Tait SJ, Hart DJ, Hurst R, Knott P, Mowat H et al..  2010.  Impact of sulphur fertilisation on crop response to selenium fertilisation. Plant and Soil. 332:31-40.
Bek AS, Sauer J, Thygesen MB, Duus JO, Petersen BO, Thirup S, James EK, Jensen KJ, Stougaard J, Radutoiu S.  2010.  Improved characterisation of nod factors and genetically based variation in LysM receptor domains identify amino acids expendable for nod factor recognition in Lotus spp.. Molecular Plant-Microbe Interactions. 23:58-66.
Makarov VV, Obraztsova EA, Solovyev AG, Morozov SY, Taliansky ME, Yaminsky IV, Kalinina NO.  2010.  The internal domain of hordeivirus movement protein TGB1 forms in vitro filamentous structures.. Biochemistry (Moscow). 75:752-758.
Taliansky ME, Brown JWS, Rajam ML, Valkonen JPT, Kalinina NO.  2010.  Involvement of the plant nucleolus in virus and viroid infections: Parallels with animal pathosystems. Advances in Virus Research. 77:119-158.
Campbell R, Ducreux LJM, Morris WL, Morris JA, Suttle JC, Ramsay G, Bryan GJ, Hedley PE, Taylor MA.  2010.  The metabolic and developmental roles of cartotenoid cleavage dioxygenase 4 from potato. Plant Physiology. 154:656-664.
Elia M, Swanston JS, Moralejo MA, Casas AM, P AM, Ciudad FJ, Thomas WTB, Smith PL, Ullrich SE, Molina-Cano J-L.  2010.  A model of the genetic differences in malting quality between European and North American barley cultivars based on a QTL study of the cross Triumph x Morex. Plant Breeding. 129:280-290.
Madsen LH, Tirichine L, Jurkiewicz A, Sullivan JT, Heckmann AB, Bek AS, Ronson CW, James EK, Stougaard J.  2010.  The molecular network governing nodule organogenesis and infection in the model legume Lotus japonicus. Nature Communications. 1:-10.
Wright KM, Cowan GH, Lukhovitskaya NI, Tilsner J, Roberts AG, Savenkov EI, Torrance L.  2010.  The N-terminal domain of PMTV TGB1 movement protein is required for nucleolar localization, microtubule association and long-distance movement. Molecular Plant-Microbe Interactions. 23:1486-1497.
Chichkova NV, Shaw J, Galiullina RA, Drury GE, Tuzhikov AI, Kim S-H, Kalkum M, Hong TB, Gorshkova EN, Torrance L et al..  2010.  Phytaspase, a relocalisable cell death promoting plant protease with caspase specificity. EMBO Journal. 29:1149-1161.
Bos JIB, Armstrong MR, Gilroy EM, Boevink P, Hein I, Taylor RM, Tian ZD, Engelhardt S, Vetukuri RR, Harrower BE et al..  2010.  Phytophthora infestans effector AVR3a is essential for virulence and manipulates plant immunity by stabilizing host E3 ligase CMPG1. Proceedings of the National Academy of Sciences, USA. 107:9909-9914.
Gill CIR, McDougall GJ, Glidewell SM, Stewart D, Shen Q, Tuohy K, Dobbin A, Boyd A, Brown E, Haldar S et al..  2010.  Profiling of phenols in human faecal water after raspberry supplementation. Journal of Agricultural and Food Chemistry. 58:10389-10395.
Oliva R, Win J, Raffaele S, Boutemy L, Bozkurt TO, Chaparro-Garcia A, Segretin ME, Stam R, Schornack S, Cano LM et al..  2010.  Recent developments in effector biology of filamentous plant pathogens. Cellular Microbiology. 12:705-715.
Morris WL, Shepherd T, Verrall SR, McNicol JW, Taylor MA.  2010.  Relationships between volatile and non-volatile metabolites and attributes of processed potato flavour. Phytochemistry. 71:1765-1773.
Vittoz P, Bayfield N, Brooker R, Elston DA, Duff EI, Theurillat JP, Guisan A.  2010.  Reproducibility of species lists, visual cover estimates and frequency methods for recording high-mountain vegetation. Journal of Vegetation Science. 21:1035-1047.
Thorsen MK, Hopkins DW, Woodward S, McKenzie BM.  2010.  Resilience of microorganisms and aggregation of a sandy calcareous soil to amendment with organic and synthetic fertilizer. Soil Use and Management. 26:149-157.
K A, Kuiper HA, Marvin HJP, Boon PE, Busk L, Cnudde FC, Cope S, Davies HV, Dreyer M, Frewer LJ et al..  2010.  The SAFE FOODS framework for improved risk analysis of foods. Food Control. 21:1566-1587.
Broadley MR, Alcock J, Alford J, Cartwright P, Foot I, Fairweather-Tait SJ, Hart DJ, Hurst R, Knott P, McGrath SP et al..  2010.  Selenium biofortification of high-yielding winter wheat (Triticum aestivum L.) by liquid or granular Se fertilisation. Plant and Soil. 332:5-18.
Stroud JL, Broadley MR, Foot I, Fairweather-Tait SJ, Hart DJ, Hurst R, Knott P, Mowat H, Norman K, Scott P et al..  2010.  Soil factors affecting selenium concentration in wheat grain and the fate and speciation of Se fertilisers applied to soil. Plant and Soil. 332:19-30.
Hornyik C, Terzi LC, Simpson GG.  2010.  The Spen family protein FPA controls alternative cleavage and polyadenylation of RNA. Developmental Cell. 18:203-213.
Hodgson JG, Sharafi M, Jalili A, Diaz S, Montserrat-Marti G, Palmer C, Cerabolini B, Pierce S, Hamzehee B, Asri Y et al..  2010.  Stomatal vs. genome size in angiosperms: The somatic tail wagging the genomic dog? Annals of Botany. 105:573-584.
Tilsner J, Oparka KJ.  2010.  Tracking the green invaders: advances in imaging virus infection in plants. Biochemical Journal. 430:21-37.
Joshi MV, Mann SG, Antelmann H, Widdick DA, Fyans JK, Chandra G, Hutchings MI, Toth IK, Hecker M, Loria R et al..  2010.  The twin arginine protein transport pathway exports multiple virulence proteins in the plant pathogen Streptomyces scabies. Molecular Microbiology. 77:252-271.
Verchot-Lubicz J, Torrance L, Solovyev AG, Morozov SY, Jackson AO, Gilmer D.  2010.  Varied movement strategies employed by triple gene block encoding viruses (Review). Molecular Plant-Microbe Interactions. 23:1231-1247.
Lichner L, Hallett PD, Orfanus T, Czachor H, Rajkai K, Sir M, Tesai M.  2010.  Vegetation impact on the hydrology of an aeolian sandy soil in a continental climate. Ecohydrology. 3:413-420.
Waugh R, Marshall DF, Thomas WTB, Comadran J, Russell JR, Close T, Stein N, Hayes P, Muehlbauer G, Cockram J et al..  2010.  Whole-genome association mapping in elite inbred crop varieties. Genome. 53:967-972.
2011
Mayor DJ, Cook K, Thornton B, Walsham P, Witte UFM, Zuur AF, Anderson TR.  2011.  Absorption efficiencies and basal turnover of C, N and fatty acids in a marine Calanoid copepod. Functional Ecology. 25:509-518.
Thirugnanasambandam A, Wright KM, Havis ND, Whisson SC, Newton AC.  2011.  Agrobacterium-mediated transformation of the barley pathogen Ramularia collo-cygni with fluorescent marker tags and live tissue imaging of infection development. Plant Pathology. 60:929-937.
Paterson E, Neilson R, Midwood AJ, Osborne SM, Sim A, Thornton B, Millard P.  2011.  Altered food web structure and C-flux pathways associated with mineralisation of organic amendments to agricultural soil. Applied Soil Ecology. 48:107-116.
Prior GL, Evans DM, Thirgood SJ, Redpath S, Monaghan P.  2011.  Birds bias offspring sex ratio in response to livestock grazing. Biology Letters. 7:958-960.
Thornton B, Zhang ZL, Mayes RW, Hogberg MN, Midwood AJ.  2011.  Can gas chromatography combustion isotope ratio mass spectrometry be used to quantify organic compound abundance? Rapid Communications in Mass Spectrometry. 23:2433-2438.
Blackstock KL, Dinnie E, Trench H, Miles G.  2011.  Co-researching the Cairngorms: supporting the aims of, not just researching in, the Cairngorms National Park. Scottish Geographical Journal.. 127:40-60.
Fisher M, Downie H, Welten MCM, Delgado I, Bain AA, Planzer T, Sherman A, Sang H, Tickle C.  2011.  Comparative analysis of 3D expression patterns of transcription factor genes and digit fate maps in the developing chick wing. PLoS ONE. 6:e18661.
Cullen DW, Harwood WA, Smedley M, Davies HV, Taylor MA.  2011.  Comparison of DNA walking methods for isolation of transgene flanking regions in GM potato. Molecular Biotechnology. 49:19-31.
Dick J, Andrews C, Beaumont DA, Benham S, Brooks DR, Corbett S, Lloyd D, McMillan S, Monteith DT, Pilgrim ES et al..  2011.  A comparison of ecosystem services delivered by 11 long-term monitoring sites in the UK environmental change network. Environmetrics. 22:639-648.
Vinten AJA, Artz RRE, Thomas N, Potts JM, Avery LM, Langan SJ, Watson H, Cook Y, Taylor C, Abel C et al..  2011.  Comparison of microbial community assays for the assessment of stream biofilm ecology. Journal of Microbiological Methods. 85:190-198.
Dyer GA, Taylor JE.  2011.  The corn price surge: impacts in rural Mexico. World Development. 39:1878-1887.
Newton AC, Flavell AJ, George TS, Leat P, Mullholland BJ, Ramsay L, Revoredo-Giha C, Russell JR, Steffenson BJ, Swanston JS et al..  2011.  Crops that feed the world 4. Barley: a resilient crop? Strengths and weaknesses in the context of food security Food Security. 3:141-178.
Burthe S, Butler A, Searle KR, Hall S, Thackeray SJ, Wanless S.  2011.  Demographic consequences of increased winter births in a large aseasonally breeding mammal (Bos taurus) in response to climate change. Journal of Animal Ecology. 80:1134-1144.
Francia E, Tondelli A, Rizza F, Badeck FW, Nicosia OLD, Akar T, Grando S, Al-Yassin A, Bendelkacem A, Thomas WTB et al..  2011.  Determinants of barley grain yield in a wide range of Mediterranean environments. Field Crops Research. 120:169-178.
Toth IK, van der Wolf JM, Saddler G, Lojkowska E, Helias V, Pirhonen M, Tsror L, Elphinstone JG.  2011.  Dickeya species: an emerging problem for potato production in Europe. Plant Pathology. 60:385-399.
Singh BK, Tate K, Thomas N, Ross D, Singh J.  2011.  Differential effect of afforestation on nitrogen-fixing and denitrifiying communities and potential implications for nitrogen cycling. Soil Biology and Biochemistry. 43:1426-1433.
Zebarth BJ, Tai H, Sainan L, Millard P, De Koyer D, Li XQ, Xiong X.  2011.  Differential gene expression as an indicator of nitrogen sufficiency in field grown potato plants. Plant and Soil. 345:387-400.
Woinarski JCZ, Legge S, Fitzsimons JA, Traill BJ, Burbidge AA, Fisher A, Firth RSC, Gordon IJ, Griffiths AD, Johnson C et al..  2011.  The disappearing mammal fauna of northern Australia: context, cause, and response. Conservation Letters. 4:192-201.
Townsend SE, Newey SJ, Thirgood SJ, Haydon DT.  2011.  Dissecting the drivers of population cycles: interactions between parasites and mountain hare demography. Ecological Modelling. 222:48-56.
Tingem Munang R, Thiaw I, Rivington M.  2011.  Ecosystem management: tomorrow's approach to enhancing food security under a changing climate. Sustainability. 3:937-954.
Swanston JS, Middlefell-Williams J, Forster BP, Thomas WTB.  2011.  Effects of grain and malt beta-glucan on distilling quality in a population of hull-less barley. Journal of the Institute of Brewing. 117:389-393.
Psaltopoulos D, Skuras D, Thomson KJ.  2011.  Employment effects of private investment initiatives in rural areas of southern Europe: a regional SAM approach. Agricultural Economics Review (Greek Association of Agricultural Economists). 12:50-61.

Printed from /publications/publications-list/ag/T?page=1&sort=year&order=asc on 19/04/24 10:21:45 PM

The James Hutton Research Institute is the result of the merger in April 2011 of MLURI and SCRI. This merger formed a new powerhouse for research into food, land use, and climate change.