Publications list

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2020

Roger-Estrade J, McKenzie BM, Torbert A, Noellemeyer E. 2020. The Soil & Tillage Research Virtual Special Issue related to the 21th International ISTRO Conference. Soil and Tillage Research. 199:ArticleNo.104576.

Prandel LV, Melo VF, Testoni SA, Brinatti AM, da Costa Saab S, Dawson LA. 2020. Spectroscopic techniques applied to discriminate soils for forensic purposes. Soil Research. 58:151-160.

Kakkar K, Keijzer C, Rodier M, Bukharova T, Taliansky M, Love AJ, Milner JJ, Karimullah AS, Barron LD, Gadegaard N et al.. 2020. Superchiral near fields detect virus structure. Light: Science and Applications. 9:ArticleNo.195.

Ritson JP, Alderson DM, Robinson CH, Burkitt A, Heinemeyer A, Stimson AG, Gallego-Sala A, Harris A, Quillet A, Malik AA et al.. 2020. Towards a microbial process-based understanding of the resilience of peatland ecosystem service provisioning - a research agenda. Science of The Total Environment. 759:ArticleNo.143467.

Orman-Ligeza B, Harwood W, Hedley PE, Hinchcliffe A, Macaulay M, Uauy C, Trafford K. 2020. TRA1: A locus responsible for controlling agrobacterium-mediated transformability in barley. Frontiers in Plant Science. 11:ArticleNo.355.

Kattge J, Bonisch G, Diaz S, Lavorel S, Prentice IC, Leadley P, Tautenhahn S, Werner GDA, Pakeman RJ, White PJ et al.. 2020. TRY plant trait database - enhanced coverage and open access. Global Change Biology. 26:119-188.

Stirling JM, Eze JI, Foster G, Reeves A, Gunn GJ, Tongue SC. 2020. The use of sheep movement data to inform design and interpretation of slaughterhouse-based surveillance activities. Frontiers in Veterinary Science. 7:ArticleNo.205.

Black K, Daute M, Tziboula-Clarke A, White PJ, Iannetta PPM, Walker G. 2020. Utilization of low nitrogen barley for production of distilling quality malt. Journal of the American Society of Brewing Chemists.

Turicchi J, O'Driscoll R, Horgan G, Duarte C, Palmeira AL, Larsen SC, Heitmann BL, Stubbs J. 2020. Weekly, seasonal and holiday body weight fluctuation patterns among individuals engaged in a European multi-centre behavioural weight loss maintenance intervention. PLoS ONE. 15:ArticleNo.e0232152.

Choudhary S, Tak N, Bissa G, Chouhan B, Choudhary P, Sprent JI, James EK, Gehlot HS. 2020. The widely distributed legume tree Vachellia (Acacia) nilotica subsp. indica is nodulated by genetically diverse Ensifer strains in India. Symbiosis. 80:15-31.

Loe LE, Liston GE, Pigeon G, Barker K, Horvitz N, Stien A, Forchhammer M, Getz WM, Irvine RJ, Lee AE et al.. 2020. The neglected season: warmer autumns counteract harsher winters and promote growth in Arctic reindeer. Global Change Biology. 27:993-1002.

2021

Guo W, Tzioutziou NA, Stephen G, Milne I, Calixto CPG, Waugh R, Brown JWS, Zhang R. 2021. 3D RNA-seq: a powerful and flexible tool for rapid and accurate differential expression and alternative splicing analysis of RNA-seq data for biologists. RNA Biology.Published online..

Shoesmith JR, Solomon CU, Yang X, Wilkinson LG, Sheldrick S, van Eijden E, Couwenberg S, Pugh LM, Eskan M, Stephens J et al.. 2021. APETALA2 functions as a temporal factor together with BLADE-ON-PETIOLE2 and MADS29 to control flower and grain development in barley. Development. 148:ArticleNo.dev194894.

Banda L, Moyo M, Nakitto M, Swanckaert J, Onyango A, Magiri E, McDougall GJ, Ducreux LJM, Taylor M, Muzhingi T. 2021. Application of wedge fracture test for texture analysis in boiled Sweetpotato (Ipomoea batatas). African Journal of Food Science. 15:145-151.

Biurrun I, Pielech R, Dembicz I, Gillet F, Kozub L, Marcenò C, Reitalu T, van Meerbeek K, Guarino R, Chytrý M et al.. 2021. Benchmarking plant diversity of Palaearctic grasslands and other open habitats. Journal of Vegetation Science. 32:ArticleNo.e13050.

Graeber D, Tenzin Y, Stutter MI, Weigelhofer G, Shatwell T, von Tümpling W, Tittel J, Wachholz A, Borchardt D. 2021. Bioavailable DOC : reactive nutrient ratios control heterotrophic nutrient assimilation - an experimental proof of the macronutrient-imbalance hypothesis. Biogeochemistry, Published online..

Plue J, Van Calster H, Auestad I, Basto S, Bekker RM, Bruun HH, Chevalier R, Decocq G, Grandin U, Hermy M et al.. 2021. Buffering effects of seed banks on plant community diversity in response to land use and climate. Global Ecology and Biogeography. 30:128-139.

Berghuijs HNC, Weih M, van der Werf W, Karley AJ, Adam E, Villegas-Fernandez AM, Kiaer LP, Newton AC, Scherber C, Tavoletti S et al.. 2021. Calibrating and testing APSIM for wheat-faba bean pure cultures and intercrops across Europe. Field Crops Research. 264:ArticleNo.108088.

Herman NC, Berghuijs MW, van der Werf W, Karley AJ, Adam E, Villegas-Fernández AM, Kiær LP, Newton AC, Scherber C, Tavoletti S et al.. 2021. Calibrating and testing APSIM for wheat-faba bean pure cultures and intercrops across Europe. Field Crops Research. 264:ArticleNo.108088..

Penhaul Smith JK, Hughes AD, McEvoy L, Thornton B, Day JG. 2021. The carbon partitioning of glucose and DIC in mixotrophic, heterotrophic and photoautotrophic cultures of Tetraselmis suecica. Biotechnology Letters. Published online..

Mitchell RJ, Bellamy P, Broome A, Ellis C, Hewison R, Iason G, Littlewood N, Newey S, Pozsgai G, Dunan R et al.. 2021. Cumulative impact assessments of multiple host species loss from plant diseases show disproportionate reductions in associated biodiversity. Journal of Ecology.

Young JPW, Moeskjær S, Afonin A, Rahi P, Maluk M, James EK, Cavassim MIA, Rashid M, Aserse AA, Perry BJ et al.. 2021. Defining the rhizobium leguminosarum species complex. Genes. 12:ArticleNo.111.

Trondrud LM, Pigeon G, Albon S, Arnold W, Evans AL, Irvine RJ, Król E, Ropstad E, Stien A, Veiberg V et al.. 2021. Determinants of heart rate in Svalbard reindeer reveal mechanisms of seasonal energy management. Philosophical Transactions of the Royal Society B. 376:ArticleNo20200215.

Trinder CJ, Brooker RW, Davidson H, Robinson D. 2021. Directly quantifying multiple interacting influences on plant competition. Plant Cell and Environment. 44:1268-1277.

Kuhfuss L, Préget R, Thoyer S, de Vries FP, Hanley N. 2021. Enhancing spatial coordination in payment for ecosystem services schemes with non-pecuniary preferences. Ecological Economics..

Rowney FM, Brennan GL, Skjoth CA, Griffith GW, McInnes RN, Clewlow Y, Adams-Groom B, Barber A, de Vere N, Economou T et al.. 2021. Environmental DNA reveals links between abundance and composition of airborne grass pollen and respiratory health. Current Biology. 31:1995-2003.

Luczaj L, Wilde M, Townsend L. 2021. The ethnobiology of contemporary British foragers: foods they teach, their sources of inspiration and impact. Sustainability. 13:ArticleNo.3478.

Jamwal P, Raj AV, Raveendran L, Shirin S, Connelly S, Yeluripati J, Richards S, Rao L, Helliwell RC, Tamburini M. 2021. Evaluating the performance of horizontal sub-surface flow constructed wetlands: a case study from southern India. Ecological Engineering Journal. 162:ArticleNo.106170.

Dobani S, Latimer C, McDougall GJ, Allwood JW, Pereira-Caro G, Moreno-Rojas JM, Ternan NG, Pourshahidi LK, Lawther R, Tuohy KM et al.. 2021. Ex vivo fecal fermentation of human ileal fluid collected after raspberry consumption modifies (poly)phenolics and modulates genoprotective effects in colonic epithelial cells. Redox Biology.. 40:ArticleNo.101862.

Trondrud LM, Pigeon G, Król E, Albon S, Evans AL, Arnold W, Hambly C, Irvine RJ, Ropstad E, Stien A et al.. 2021. Fat storage influences fasting endurance more than body size in an ungulate. Functional Ecology. 35:1470-1480.

Raubach S, Kilian B, Dreher K, Amri A, Bassi FM, Boukar O, Cook D, Cruickshank A, Fatokun C, El Haddad N et al.. 2021. From bits to bites: advancement of the Germinate platform to support prebreeding informatics for crop wild relatives. Crop Science. Published online.

Matros A, Houston K, Tucker MR, Schreiber M, Berger B, Aubert MK, Wilkinson LG, Witzel K, Waugh R, Seiffert U et al.. 2021. Genome-wide association study reveals the genetic complexity of fructan accumulation patterns in barley grain. Journal of Experimental Botany. 72:2383-2402.

Mwafulirwa L, Paterson E, Cairns JE, Daniell TJ, Thierfelder C, Baggs EM. 2021. Genotyic variation in maize (Zeamays)-microbe-management interactions for enhancing soil functioning in maize-based cropping systems. New Phytologist. Published online..

Weih M, Karley AJ, Newton AC, Kiær LP, Scherber C, Rubiales D, Adam E, Ajal J, Brandmeier J, Pappagallo S et al.. 2021. Grain yield stability of cereal-legume intercrops is greater than sole crops in more productive conditions. Agriculture. 11:ArticleNo.255.

Weih M, Ajal J, Kiær LP, Karley AJ, Newton AC, Scherber C, Brandmeier J, Pappagallo S, Tavoletti S. 2021. Grain yield stability of individual cereal-legume mixtures grown across Europe. Aspects of Applied Biology. 146:241-248.

Ducreux LJM, Pont SDA, Verrall SR, McManus W, Hancock RD, Taylor MA. 2021. The impact of home storage conditions on the accumulation of acrylamide precursors in potato tubers. Annals of Applied Biology. 178:304-314.

Shahbaz M, Thornton B, Borjesson G. 2021. Importance of fungi in a 63 years old long-term field experiment with 20 years of maize growth. European Journal of Soil Biology. 102:ArticleNo.103264.

Ayllón D, Railsback SF, Gallagher C, Augusiak J, Baveco H, Berger U, Charles S, Martin R, Focks A, Galic N et al.. 2021. Keeping modelling notebooks with TRACE: good for you and good for environmental research and management support. Environmental Modelling and Software. 136:ArticleNo.104932.

Holland JE, White PJ, Thauvin JN, Jordan-Meille L, Haefele SM, Thomas CL, Goulding KWT, McGrath SP. 2021. Liming impacts barley yield over a wide concentration range of soil exchangeable cations. Nutrient Cycling in Agroecosystems. Published online..

Black K, Tziboula-Clarke A, White PJ, Iannetta PPM, Walker G. 2021. Optimised processing of faba bean (Vicia faba L.) kernels as a brewing adjunct. Journal of the Institute of Brewing. 127:13-20.

Marselle MR, Hartig T, Cox DT, de Bell S, Knapp S, Lindley S, Triguero-Mas M, Bohning-Gaese K, Braubach M, Cook PA et al.. 2021. Pathways linking biodiversity to human health: A conceptual framework. Environment International. 150:ArticleNo.106420.

Wang H, Wang Y, Humphris S, Nie W, Zhang P, Wright F, Campbell E, Hu B, Fan J, Toth I. 2021. Pectobacterium atrosepticum KDPG aldolase, Eda, participates in the Entner-Doudoroff pathway and independently inhibits expression of virulence determinants. Molecular Plant Pathology. 22:271-283.

Blackstock KL, Novo P, Byg A, Creaney R, Juarez Bourke A, Maxwell JL, Tindale SJ, Waylen KA. 2021. Policy instruments for environmental public goods: interdependencies and hybridity. Land Use Policy. 104:ArticleNo.104709.

Breeze TD, Bailey AP, Balcombe KG, Brereton T, Comont R, Edwards M, Garratt MP, Harvey M, Hawes C, Isaac N et al.. 2021. Pollinator monitoring more than pays for itself. Journal of Applied Ecology. 58:44-57.

Saville AC, La Spada F, Faedda R, Migheli Q, Scanu B, Ermacora P, Gilardi G, Fedele G, Rossi V, Lenzi N et al.. 2021. Population structure of Phytophthora infestans collected on potato and tomato in Italy. Plant Pathology. Published online..

Kurganskiy A, Creer S, de Vere N, Griffith GW, Osborne NJ, Wheeler BW, McInnes RN, Clewlow Y, Barber A, Brennan GL et al.. 2021. Predicting the severity of the grass pollen season and the effect of climate change in Northwest Europe. Science Advances. 7:ArticleNo.eabd7658.

Börger T, Thi Khanh Ngoc Q, Kuhfuss L, Hien TT, Hanley N, Campbell D. 2021. Preferences for coastal and marine conservation in Vietnam: accounting for differences in individual choice set formation. Ecological Economics. 180:ArticleNo.106885.

Spechenkova N, Fesenko IA, Mamaeva A, Suprunova TP, Kalinina NO, Love AJ, Taliansky M. 2021. The resistance responses of potato plants to potato virus Y are associated with an increased cellular methionine content and an altered SAM:SAH methylation index. Viruses. 13:ArticleNo.955.

Taliansky ME, Samarskaya V, Zavriev SK, Fesenko I, Kalinina NO, Love AJ. 2021. RNA-based technologies for engineering plant virus resistance. Plants. 10:ArticleNo.82.

Fesenko IA, Spechenkova N, Mamaeva A, Makhotenko A, Love AJ, Kalinina NO, Taliansky ME. 2021. Role of the methionine cycle in the temperature-sensitive responses of potato plants to potato virus Y. Molecular Plant Pathology. 22:77-91.

Lu Y, Wang E, Tang Z, Rui J, Li Y, Tang Z, Dong W, Liu X, George TS, Song A et al.. 2021. Roots and microbiome jointly drive the distributions of 17 phytohormones in the plant soil continuum in a phytohormone-specific manner. Plant and Soil..

van Rees CB, Waylen KA, Schmidt-Kloiber A, Thackeray SJ, Kalinkat G, Martens K, Domisch S, Lillebø AI, Hermoso V, Grossert HP et al.. 2021. Safeguarding freshwater life beyond 2020: Recommendations for the new global biodiversity framework from the European experience. Conservation Letters. 14:ArticleNo.e12771.

Piras S, Tobiasz-Lis P, Currie M, Dmochowska-Dudek K, Duckett D, Copus A. 2021. Spatial justice on the horizon? A combined theory of change scenario tool to assess place-based interventions European Planning Studies. Published online..

Li Y, Taggart MA, McKenzie C, Zhang ZL, Lu YL, Pap S, Gibb SW. 2021. A SPE-HPLC-MSMS method for the simultaneous determination of prioritised pharmaceuticals and EDCs with high environmental risk potential in freshwater. Journal of Environmental Science. 100:18-27.

Demars BOL, Kemp JL, Marteau B, Friberg N, Thornton B. 2021. Stream macroinvertebrates and carbon cycling in tangled food webs. Ecosystems. Published online..

Sumane S, Ortiz-Miranda D, Pinto-Correia T, Czekaj M, Duckett D, Galli F, Grivins M, Noble C, Tisenkopfs M, Toma I et al.. 2021. Supporting the role of small farms in the European regional food systems: What role for the science-policy interface? Global Food Security. 28:ArticleNo.100433.

Ceschi A, Sartori R, Dickert S, Scalco A, Tur EM, Tommasi F, Delfini K. 2021. Testing a norm-based policy for waste management: an agent-based modeling simulation on nudging recycling behavior. Journal of Environmental Management. 294:ArticleNo.112938.

Bach LT, Tamsitt V, Gower J, Hurd CL, Raven JA, Boyd PW. 2021. Testing the climate intervention potential of ocean afforestation using the Great Atlantic Sargassum Belt. Nature Communications. 12:ArticleNo.2556.

Littlewood NA, Hancock MH, Newey S, Shackelford G, Toney R. 2021. Use of a novel camera trapping approach to measure small mammal responses to peatland restoration. European Journal of Wildlife Research. 67:ArticleNo.12.

Black K, Daute M, Tziboula-Clarke A, White PJ, Iannetta PPM, Walker G. 2021. Utilization of low nitrogen barley for production of distilling quality malt. Journal of the American Society of Brewing Chemists. 79:26-32.

2022

Leybourne DJ, Valentine TA, Binnie K, Taylor A, Karley AJ, Bos JIB. 2022. Drought stress increases the expression of barley defence genes with negative consequences for infesting cereal aphids. Journal of Experimental Botany.

Tanaka K, Hanley N, Kuhfuss L. 2022. Farmers’ preferences toward an outcomebased payment for ecosystem service scheme in Japan. Journal of Agricultural Economics.

Reed M, Curtis T, Gosal A, Kendall H, Andersen S, Ziv G, Attle A, Fitton R, Hay M, Gibson A et al.. 2022. Integrating ecosystem markets to coordinate landscapescale public benefits from nature. Published in PLOSONE on 12th Jan 2022. Citation: Reed MS, Curtis T, Gosal A, Kendall H, Andersen SP, Ziv G, et al. (2022) Integrating ecosystem markets to co-ordinate landscape-scale public benefits from nature. PLoS ONE 17(1): e0258334. https://doi.

Ollerton J, Trunschke J, Havens K, Landaverde-González P, Keller A, Gilpin A, Rech A, Baronio G, Phillips B, Mackin C et al.. 2022. Pollinator-flower interactions in gardens during the COVID19 pandemic lockdown of 2020. Journal of Pollination Ecology.

Troldborg M, Gagkas Z, Vinten A, Lilly A, Glendell M. 2022. Probabilistic modelling of the inherent fieldlevel pesticide pollution risk in a small drinking water catchment using spatial Bayesian belief networks. Hydrology and Earth Systems Science. 26:1261-1293.

Neugebauer K, Broadley MR, El-Serehy HA, George TS, Graham NS, Thompson JA, Wright G, White PJ. 2022. Sodium hyperaccumulators in the Caryophyllales are characterised by both abnormally large shoot sodium concentrations and [Na]shoot [Na]root quotients greater than unity. Annals of Botany 129, 65-79. (doi: 10.1093/aob/mcab126).

Niemi L, Landova P, Taggart M, Boyd K, Zhang Z, Gibb S. 2022. Spatiotemporal trends and annual fluxes of pharmaceuticals in a Scottish priority catchment. Environmental Pollution.

Ollerton J, Trunschke J, Havens K, Landaverde-González P, Keller A, Gilpin A, Rech A, Baronio G, Phillips B, Mackin C et al.. 2022. A systematic review of methods for studying the impacts of outdoor recreation on terrestrial wildlife. Global Ecology and Conservation. 22:ArticleNo.e00917.

Glushkevich A, Spechenkova N, Fesenko I, Knyazev A, Samarskaya V, O. Kalinina N, Taliansky M, Love A. 2022. Transcriptomic reprogramming, alternative splicing and RNA methylation in potato (Solanum tuberosum L) plants in response to potato virus Y infection. Plants. 11

In Press

Jouet A, Saunders DGO, McMullan M, Ward B, Furzer O, Jupe F, Cevik V, Hein I, Thilliez GJA, Holub E et al.. In Press. Albugo candida race diversity, ploidy and host-associated microbes revealed using DNA sequence capture on diseased plants in the field. New Phytologist. Published online..

Mitchell RJ, Broome A, Beaton JK, Bellamy PE, Ellis CJ, Hester AJ, Hodgetts NG, Iason GR, Littlewood NA, Newey S et al.. In Press. Challenges in assessing the ecological impacts of tree diseases and mitigation measures: the case of Hymenoscyphus fraxineus and Fraxinus excelsior. Baltic Forestry. 23:116-140.

Thilliez GJA, Armstrong MR, Lim TY, Baker K, Jouet A, Ward B, van Oosterhout C, Jones JDG, Huitema E, Birch PRJ et al.. In Press. Pathogen enrichment sequencing (PenSeq) enables population genomic studies in oomycetes. New Phytologist. Published online..