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Bierman S, Butler A, Marion G, K I.  2010.  Bayesian image restoration models for combining expert knowledge on recording activity with species distribution data. Ecography. 33:451-460.
Spezia L.  2010.  Bayesian analysis of multivariate Gaussian hidden Markov models with an unknown number of regimes. Journal of Time Series Analysis. 31:1-11.
Eichmann R, Bischof M, Weis C, Shaw J, Lacomme C, Schweizer P, Duchkov D, Hensel G, Kumlehn J, H R.  2010.  BAX INHIBITOR-1 is required for full susceptibility of barley to powdery mildew. Molecular Plant-Microbe Interactions. 23:1217-1227.
Swanston JS, Newton AC, Hoad SP, Spoor W.  2005.  Barleys grown as cultivar mixtures compared with blends made before and after malting, for effects on malting performance. Journal of the Institute of Brewing. 111:144-152. Abstract
Torrance L, Cowan GH, Gillespie T, Ziegler A, Lacomme C.  2006.  Barley stripe mosaic virus-encoded proteins triple-gene block 2 and gb localise to chloroplasts in virus-infected monocot and dicot plants revealing hitherto-unknown roles in virus replication. Journal of General Virology. 87:2403-2411. Abstract
Forster BP, Franckowiak JD, Lundqvist U, Lyon J, Pitkethly I, Thomas WTB.  2007.  The barley phytomer. Annals of Botany. 100:725-733. Abstract
Rostoks N, Schmierer D, Mudie S, Drader T, Brueggeman R, Caldwell DG, Waugh R, Kleinhofs A.  2006.  Barley necrotic locus nec1 encodes the cyclic nucleotide-gated ion channel 4 homologous to the Arabidopsis HLM1. Molecular Genetics and Genomics. 275:159-168. Abstract
Pswarayi A, van Eeuwijk FA, Ceccarelli S, Grando S, Comadran J, Russell JR, Francia E, Pecchioni N, Li Destri O, Akar T et al..  2008.  Barley adaptation and improvement in the Mediterranean basin. Plant Breeding. 127:554-560.
Ravensdale M, Blom TJ, Gracia-Garza JA, Svircev AM, Smith RJ.  2007.  Bacteriophages and the control of Erwinia carotovora subsp. carotovora. Canadian Journal of Plant Pathology. 29:121-130.
Mao X, Hu F, Griffiths BS, Li H.  2006.  Bacterial-feeding nematodes enhance root growth of tomato seedlings. Soil Biology & Biochemistry. 38:1615-1622. Abstract
Antunez-Lamas M, Cabrera E, Lopez-Solanilla E, Solano R, Gonzalez-Melendi P, Chico JM, Toth IK, Birch PRJ, Pritchard L, Liu H et al..  2009.  Bacterial chemoattraction towards jasmonate plays a role in the entry of Dickeya dadantii through wounded tissues. Molecular Microbiology. 74:662-671.
Karunakaran R, Haag AF, East AK, Ramachandran VK, Prell J, James EK, Scocchi M, Ferguson GP, Poole PS.  2010.  BacA is essential for bacteroid development in nodules of galegoid, but not phaseoloid, legumes. Journal of Bacteriology. 192:2920-2928.
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Sharma SK, Bryan GJ, Millam S.  2007.  Auxin pulse treatment holds the potential to enhance efficiency and practicability of somatic embryogenesis in potato. Plant Cell Reports. 26:945-950. Abstract
Gomez LD, Whitehead C, Barakate A, Halpin C, McQueen-Mason SJ.  2010.  Automated saccharification assay for determination of digestibility in plant materials. Biotechnology for Biofuels. 3:-23.
Johnson SN, Gregory PJ, Greenham JR, Zhang X, Murray PJ.  2005.  Attractive properties of an isoflavonoid found in white clover root nodules on the clover root weevil. Journal of Chemical Ecology. 31:2223-2229. Abstract
Fenton B, Malloch G, Woodford JAT, Foster SP, Anstead J, Denholm I, King L, Pickup J.  2005.  The attack of the clones: tracking the movement of insecticide-resistant peach-potato aphids Myzus persicae (Hemiptera: Aphididae). Bulletin of Entomological Research. 95:483-494. Abstract
Obraztsova EA, Kalinina NO, Taliansky ME, Gabrenaite-Verkhovskaya R, Makinen K, Yaminsky IV.  2008.  Atomic force microscopy of potato virus A.. Colloid Journal. 70:199-201. Abstract
Druka A, Muehlbauer G, Druka I, Caldo R, Baumann U, Rostoks N, Schreiber A, Wise R, Close T, Kleinhofs A et al..  2006.  An atlas of gene expression from seed to seed through barley development. Functional & Integrative Genomics. 6:202-211. Abstract
Caron-Lormier G, Humphry RW, Bohan DA, Hawes C, Thorbek P.  2008.  Asynchronous and synchronous updating in individual-based models. Ecological Modelling. 212:522-527. Abstract
Raven JA.  2007.  Astrobiology: Photosynthesis in watercolours. Nature. 448:-418.
Swanston JS, Smith PL, Gillespie TL, Brosnan JM, Bringhurst TA, Agu RC.  2007.  Associations between grain characteristics and alcohol yield among soft wheat varieties. Journal of the Science of Food and Agriculture. 87:676-683. Abstract
Squires J, Stephens J, Schoelz JE, Palukaitis P.  2007.  Assessment of CaMV-mediated gene silencing and integration of CaMV into GM plants with a 35S RNA promoter. Environmental Biosafety Research. 6:259-270. Abstract
Watkins C, Schock A, May L, Denham S, Sales J, Welch L, Sharp JM, Stevenson K.  2010.  Assessing virulence of vaccine strains of Mycobacterium avium subspecies paratuberculosis in a calf model. Veterinary Microbiology. 146:63-69.
Schena L, Cooke DEL.  2006.  Assessing the potential of regions of the nuclear and mitochondrial genome to develop a 'molecular tool box' for the detection and characterization of Phytophthora species. Journal of Microbiological Methods. 67:70-85. Abstract
Shepherd LVT, McNicol JW, Razzo R, Taylor MA, Davies HV.  2006.  Assessing the potential for unintended effects in genetically modified potatoes perturbed in metabolic and developmental processes. Targeted analysis of key nutrients and anti-nutrients. Transgenic Research. 15:409-425. Abstract
McDougall GJ, Dobson P, Smith P, Blake A, Stewart D.  2005.  Assessing potential bioavailability of raspberry anthocyanins using an in vitro digestion system. Journal of Agricultural and Food Chemistry. 53:5896-5904. Abstract
Tetzlaff D, Waldron S, Brewer MJ, Soulsby C.  2007.  Assessing nested hydrological and hydrochemical behaviour of a mesoscale catchment using continuous tracer data. Journal of Hydrology. 336:430-443. Abstract
Navajas EA, Glasbey CA, Fisher AV, Ross DW, Hyslop JJ, Richardson RI, Simm G, Roehe R.  2010.  Assessing beef carcass tissue weights using computed tomography spirals of primal cuts. Meat Science. 84:30-38.
Walker PG, Viola R, Woodhead M, Jorgensen L, Gordon SL, Brennan RM, Hancock RD.  2010.  Ascorbic acid content of blackcurrant fruit is influenced by both genetic and enviromental factors. Functional Plant Science and Biotechnology. 4:40-52.
Hancock RD, Chudek S, Walker PG, Pont SDA, Viola R.  2008.  Ascorbic acid conjugates isolated from the phloem of Cucurbitaceae. Phytochemistry. 69:1850-1858. Abstract
Raven JA, Larkum AWD.  2007.  Are there ecological implications for the proposed energetic restrictions on photosynthetic oxygen evolution at high oxygen concentrations? Photosynthesis Research. 94:31-42. Abstract
Hawes C, Squire GR, Hallett PD, Watson CA, Young MW.  2010.  Arable plant communities as indicators of farming practice. Agriculture, Ecosystems and Environment. 138:17-26.
Terzi LC, Simpson GG.  2009.  Arabidopsis RNA immunoprecipitation. Plant Journal. 59:163-168.
Brown JWS, Shaw PJ, Shaw P, Marshall DF.  2005.  Arabidopsis nucleolar protein database (AtNoPDB). Nucleic Acids Research. 33:D633-D636.
Latijnhouwers M, Hawes C, Carvalho C, Oparka K, Gillingham AK, Boevink P.  2005.  An Arabidopsis GRIP domain protein locates to the trans-Golgi and binds the small GTPase ARL1. Plant Journal. 44:459-470. Abstract
Raven JA.  2006.  Aquatic viruses: the emerging story. Journal of the Marine Biological Association of the United Kingdom. 86:449-451. Abstract
Bevan M, Waugh R.  2007.  Applying plant genomics to crop improvement. Genome Biology. 8:302-302. Abstract
Beattie JH, Gordon MJ, Rucklidge GJ, Reid MD, Duncan GJ, Horgan GW, Cho YE, Kwun IS.  2008.  Aorta protein networks in marginal and acute zinc deficiency. Proteomics. 8:2126-2135. Abstract
Scagliarini A, McInnes CJ, Gallina L, Dal Pozza F, Scagliarini L, Snoeck R, Prosperi S, Sales J, Gilray JA, Nettleton PF.  2007.  Antiviral activity of HPMPC (cidofovir) against orf virus infected lambs. Antiviral Research. 73:169-174. Abstract
Ross HA, McDougall GJ, Stewart D.  2007.  Antiproliferative activity is predominantly associated with ellagitannins in raspberry extracts. Phytochemistry. 68:218-228. Abstract
Fortalezas S, Tavares LR, Pimpao RC, Tyagi A, Pontes V, Alves PM, McDougall GJ, Stewart D, Ferreira RB, Santos CN.  2010.  Antioxidant properties and neuroprotective capacity of strawberry tree fruit (Arbutus unedo). Nutrients. 2:214-229.
Tavares LR, Fortalezas S, Carrilho C, McDougall GJ, Stewart D, Ferreira RB, Santos CN.  2010.  Antioxidant and antiproliferative properties of strawberry tree tissues. Journal of Berry Research. 1:3-12.
Wattegedera S, Rocchi M, Sales J, Howard CJ, Hope JC, Entrican G.  2008.  Antigen-specific peripheral immune responses are unaltered during normal pregnancy in sheep. Journal of Reproductive Immunology. 77:171-178. Abstract
McDougall GJ, Fyffe S, Dobson P, Stewart D.  2005.  Anthocyanins from red wine - their stability under simulated gastrointestinal digestion. Phytochemistry. 66:2540-2548. Abstract
McDougall GJ, Fyffe S, Dobson P, Stewart D.  2007.  Anthocyanins from red cabbage - stability to simulated gastrointestinal digestion. Phytochemistry. 68:1285-1294. Abstract
McDougall GJ, Gordon SL, Brennan RM, Stewart D.  2005.  Anthocyanin-flavanol condensation products from blackcurrant (Ribes nigrum L.). Journal of Agricultural and Food Chemistry. 53:7878-7885. Abstract
Harrison BD, Robinson DJ.  2005.  Another quarter century of great progress in understanding the biological properties of plant viruses. Annals of Applied Biology. 146:15-37. Abstract
Novis PM, Whitehead D, Gregorich EG, Hunt JE, Sparrow AD, Hopkins DW, Elberling B, Greenfield LG.  2007.  Annual carbon fixation in terrestrial populations of Nostoc commune (Cyanobacteria) from an Antarctic dry valley is driven by temperature regime. Global Change Biology. 13:1224-1237. Abstract
Reyers B, Pettorelli N, Katzner T, Gompper ME, Redpath S, Garner TWJ, Altwegg R, Reed DH, Gordon IJ.  2010.  Animal conservation and ecosystem services: garnering the support of mightier forces. Animal Conservation. 13:523-525.
Jiang RHY, Tyler BM, Whisson SC, Hardham AR, Govers F.  2006.  Ancient origin of elicitin gene clusters in Phytophthora genomes. Molecular Biology and Evolution. 23:338-351. Abstract
Meharg AA, Deacon C, Edwards KJ, Donaldson M, Davidson DA, Spring C, Scrimgeour CM, Feldmann J, Rabb A.  2006.  Ancient manuring practices pollute arable soils at the St Kilda World Heritage Site, Scottish North Atlantic. Chemosphere. 64:1818-1828. Abstract
Schornack S, Van Damme M, Bozkurt TO, Cano LM, Smoker M, Thines M, Gaulin E, Kamoun S, Huitema E.  2010.  Ancient class of translocated oomycete effectors targets the host nucleus. Proceedings of the National Academy of Sciences, USA. 107:17421-17426.
Armstrong MR, Whisson SC, Pritchard L, Bos JIB, Venter E, Avrova AO, Rehmany AP, B U, Brooks K, Cherevach I et al..  2005.  An ancestral oomycete locus contains late blight avirulence gene Avr3a, encoding a protein that is recognised in the host cytoplasm. Proceedings of the National Academy of Sciences, USA. 102:7766-7771. Abstract
Scotti I, Burelli A, Cattonaro F, Chagne D, Fuller J, Hedley PE, Jansson G, Lalanne C, Madur D, Neale D et al..  2005.  Analysis of the distribution of marker classes in a genetic linkage map: A case study in Norway Spruce (Picea.abies Karst). Tree Genetics and Genomes. 1:93-102. Abstract
Koscianska E, Kalantidis K, Wypijewski K, Sadowski J, Tabler M.  2005.  Analysis of RNA silencing in agroinfiltrated leaves of Nicotiana benthamiana and Nicotiana tabacum. Plant Molecular Biology. 59:647-661. Abstract
Srinivasan DG, Fenton B, Jaubert-Possamai S, Jaouannet M.  2010.  Analysis of meiosis and cell cycle genes of the facultatively asexual pea aphid, Acyrthosiphon pisum (Hemiptera: Aphididae). Insect Molecular Biology. 19 Supplement s2:229-239.
Furlanetto C, Cardle L, Brown DJF, Jones JT.  2005.  Analysis of Expressed Sequence Tags from the ectoparasitic nematode Xiphinema index. Nematology. 7:95-104. Abstract
Karim N, Jones JT, Okada H, Kikuchi T.  2009.  Analysis of expressed sequence tags and identification of genes encoding cell-wall-degrading enzymes from the fungivorous nematode Aphelenchus avenae. BMC Genomics. 10:-525.
Fanelli E, Di Vito M, Jones JT, De Giorgi C.  2005.  Analysis of chitin synthase function in a plant parasitic nematode, Meloidogyne artiellia, using RNAi. Gene. 349:87-95. Abstract
Kim HW, Kim JB, Chu SM, Kim SY, Kim SN, Cho YS, Cho SM, Baek HJ, Park HJ, Lee DJ et al..  2010.  Analysis of anthocyanin composition and content contained from grains of the Korean purple rice varieties by liquid chromatography with diode array detection and electrospray ionization/mass spectrometry (LC-DAD-ESI/MS). Korean Journal of International Agriculture. 22:267-272.
Newton AC, Hackett CA, Swanston JS.  2008.  Analysing the contribution of component cultivars and cultivar combinations to malting quality, yield and disease in complex mixtures. Journal of the Science of Food and Agriculture. 88:2142-2152. Abstract
Hamilton K, Barfoot J, Crawford KE, Simpson CG, Beaumont PC, Bownes M.  2006.  Amplification of chloroplast DNA using the polymerase chain reaction (PCR): a practical activity for secondary school students. Journal of Biological Education. 40:172-177. Abstract
Mauro-Herrera M, Meerow AW, Perera L, Russell JR, Schnell RJ.  2010.  Ambiguous genetic relationships among coconut (Cocos nucifera L.) cultivars: the effects of outcrossing, sample source and size, and method of analysis. Genetic Resources and Crop Evolution. 57:203-217.
Masoudi-Nejad A, Nasuda S, Bihoreau M-T, Waugh R, Endo TR.  2005.  An alternative to radiation hybrid mapping for large-scale genome analysis in barley. Molecular Genetics and Genomics. 274:589-594. Abstract
Simpson CG, Lewandowska D, Fuller J, Maronova M, Kalyna M, Davidson D, McNicol JW, Raczynska D, Jarmolowski A, Barta A et al..  2008.  Alternative splicing in plants. Biochemical Society Transactions. 36:508-510.
Kr E, Tups A, Archer ZA, Ross AW, Moar KM, Bell LM, Duncan JS, Mayer CD, Morgan PJ, Mercer JG et al..  2007.  Altered expression of SOCS3 in the hypothalamic arcuate nucleus during seasonal body mass changes in the field vole, Microtus agrestis. Journal of Neuroendocrinology. 19:83-94. Abstract
Bahar B, Monahan FJ, Moloney AP, O'Kiely P, Scrimgeour CM, Schmidt O.  2005.  Alteration of the carbon and nitrogen stable isotope composition of beef by substitution of grass silage with maize silage. Rapid Communications in Mass Spectrometry. 19:1937-1942. Abstract
Beardall J, Allen D, Bragg J, Finkel ZV, Flynn KJ, Quigg A, Rees TAV, Richardson A, Raven JA.  2009.  Allometry and stoichiometry of unicellular, colonial and multicellular phytoplankton. New Phytologist. 181:295-309.
Henderson IR, Liu F, Drea SO, Simpson GG, Dean C.  2005.  An allelic series reveals essential roles for FY in plant development in addition to flowering-time control. Development. 132:3597-3607. Abstract
Glasbey CA, van der Heijden GWAM.  2007.  Alignment and sub-pixel interpolation of images using Fourier methods. Journal of Applied Statistics. 34:217-230. Abstract
Raven JA, Ball LA, Beardall J, Giordano M, Maberly SC.  2005.  Algae lacking carbon concentrating mechanisms. Canadian Journal of Botany. 83:879-890.
Ducreux LJM, Morris WL, Taylor MA, Millam S.  2005.  Agrobacterium-mediated transformation of Solanum phureja. Plant Cell Reports. 24:10-14. Abstract
Andersen MN, Sausse C, Lacroix B, Caul S, Mess A.  2007.  Agricultural studies of GM maize and the field experimental infrastructure of ECOGEN. Pedobiologia. 51:175-184. Abstract
Marion G, Smith LA, Swain DL, Davidson RS, Hutchings MR.  2008.  Agent-based modelling of foraging behaviour: the impact of spatial heterogeneity on disease risks from faeces in grazing systems. Journal of Agricultural Science. 146:507-520. Abstract
Sprent JI, Odee DW, Dakora FD.  2010.  African legumes: A vital but under-utilised resource. Journal of Experimental Botany. 61:1257-1265.
Russell JR, Kadu CAC, Jamnadass R, Booth A, Cordeiro NJ, Woodhead M, Dawson IK.  2009.  AFLP and SSR diversity in the African fruit tree Allanblackia: implications for management of a genus newly subject to domestication for the edible oil industry. Tree Genetics and Genomes. 5:517-527.
Fargette M, Lollier V, Phillips M, Blok VC, Frutos R.  2005.  AFLP analysis of the genetic diversity of Meloidogyne chitwoodi and M. fallax, major agricultural pests. Comptes Rendus Biologies. 328:455-462. Abstract
Christensen NM, Oparka KJ, Tilsner J.  2010.  Advances in imaging RNA in plants. Trends in Plant Science. 15:196-203.
Davies HV, Bryan GJ, Taylor MA.  2008.  Advances in functional genomics and genetic modification of potato (Review). Potato Research. 51:283-299. Abstract
Langkilde S, Schroder M, Stewart D, Meyer O, Conner S, Davies HV, Poulsen M.  2008.  Acute toxicity of high doses of the glycoalkaloids, . Journal of Agricultural and Food Chemistry. 56:8753-8760. Abstract
Blok VC.  2005.  Achievements in and future prospects for molecular diagnostics for plant-parasitic nematodes. Canadian Journal of Plant Pathology. 27:176-185. Abstract
Navajas EA, Lambe NR, McLean KA, Glasbey CA, Fisher AV, Charteris AJL, B L, Simm G.  2007.  Accuracy of in vivo muscularity indices measured by computed tomography and their associaton with carcass quality in lambs. Meat Science. 75:533-542. Abstract
George TS, Simpson RJ, Hadobas PA, Marshall DJ, Richardson AE.  2007.  Accumulation and phosphatase-lability of organic phosphorus in fertilised pasture soils. Australian Journal of Agricultural Research. 58:47-55. Abstract
Hirth JR, McKenzie BM, Tisdall JM.  2005.  Ability of seedling roots of Lolium perenne L. to penetrate soil from artificial biopores is modified by soil bulk density, biopore angle and biopore relief. Plant and Soil. 272:327-336. Abstract
Kim S-H, Koroleva OA, Lewandowska D, Pendle AF, Clark GP, Simpson CG, Shaw PJ, Brown JWS.  2009.  Aberrant mRNA transcripts and the nonsense-mediated decay proteins UPF2 and UPF3 are enriched in the Arabidopsis nucleolus. Plant Cell. 21:2045-2057.
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Du Z, Chen F, Zhao Z, Liao Q, Palukaitis P, Chen J.  2008.  The 2b protein and the C-terminus of the 2a protein of Cucumber mosaic virus subgroup I strains both play a role in the viral RNA accumulation and induction of symptoms. Virology. 380:363-370. Abstract
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Song BK, Hein I, Druka A, Waugh R, Marshall DF, Nadarajah K, Yap SJ, Ratnam W.  2009.  The 172 kb genomic DNA region of the O. rufipogon ylg1.1 locus: comparative sequence analysis with O. sativa ssp. japonica and O. sativa ssp. indica. Functional & Integrative Genomics. 9:97-108.
Norra S, Handley LL, Berner Z, St D.  2005.  13C and 15N natural abundances of urban soils and herbaceous vegetation in Karlsruhe, Germany. European Journal of Soil Science. 56:607-620. Abstract
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Johnson SN, Birch ANE, Gregory PJ, Murray PJ.  2006.  The 'mother knows best' principle: should soil insects be included in the preference-performance debate? Ecological Entomology. 31:395-401. Abstract
Walker CA, K M, Grenville-Briggs LJ, Avrova AO, Horner NR, McKinnon AD, Whisson SC, Birch PRJ, van West P.  2008.  A putative DEAD-box RNA-helicase is required for normal zoospore development in the late blight pathogen Phytophthora infestans. Fungal Genetics and Biology. 45:954-962. Abstract

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The James Hutton Research Institute is the result of the merger in April 2011 of MLURI and SCRI. This merger formed a new powerhouse for research into food, land use, and climate change.