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Cuesta-Marcos A, Igartua E, Ciudad FJ, Codesal P, Russell JR, Molina-Cano J-L, Moralejo MA, Sz P, Gracia MP, Lasa JM et al..  2008.  Heading date QTL in a spring x winter barley cross evaluated in Mediterranean environments. Molecular Breeding. 21:455-471. Abstract
Muehlbauer GJ, Bhau BS, Syed NH, Heinen S, Cho S, Marshall DF, Pateyron S, Buisine N, Chalhoub B, Flavell AJ.  2006.  A hAT superfamily tranposase recruited by the cereal grass genome. Molecular Genetics and Genomics. 275:553-563. Abstract
Waugh R, Leader DJ, McCallum N, Caldwell D.  2006.  Harvesting the potential of induced biological diversity. Trends in Plant Science. 11:71-79. Abstract
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Dimier C, Brunet C, Geider RD, Raven JA.  2009.  Growth and photoregulation dynamics of the picoeukaryote Pelagomonas calceolata in fluctuating light. Limnology and Oceanography. 54:823-836.
Raven JA, Thomas H.  2010.  Grasses. Current Biology. 20:R837-R839.
Bierman S, Glasbey CA.  2009.  A graphical method for dating chicks using bivariate body measurements. Journal of Agricultural, Biological and Environmental Statistics. 14:443-451.
Davies HV.  2005.  GM organisms and the EU regulatory environment.. Proceedings of the Nutrition Society. 64:481-486.
Lee JM, Davenport GF, Marshall DF, Ellis THN, Ambrose MJ, Dicks J, van Hintum TJL, Flavell AJ.  2005.  GERMINATE - A generic database for integrating genotypic and phenotypic information for plant genetic resource collections. Plant Physiology. 139:619-631. Abstract
Gadd GM, Raven JA.  2010.  Geomicrobiology of eukaryotic microorganisms. Geomicrobiology Journal. 27:491-519.
Bessell PR, Matthews L, Smith-Palmer A, Rotariu O, Strachan NJC, Forbes KJ, Cowden J, Reid SWJ, Innocent GT.  2010.  Geographic determinants of reported human Campylobacter infections in Scotland. BMC Public Health. 10:-423.
Ford KE, Gregory PJ, Gooding MJ, Pepler S.  2006.  Genotype and fungicide effects on late-season root growth of winter wheat.. Plant and Soil. 284:33-44. Abstract
Blok VC, Chapman S, Armstrong MR, Phillips M, Lilley C, Urwin P, Blanchard A, Grenier E, Jones JT.  2006.  Genomics analysis in the potato cyst nematode Globodera pallida. Phytopathology. 96:S149-S149.
Ramsey JS, Wilson ACC, de Vos M, Sun Q, Tamborindeguy C, Winfield A, Malloch G, Smith DM, Fenton B, Gray SM et al..  2007.  Genomic resources for Myzus persicae: EST sequencing, SNP identification, and microarray design. BMC Genomics. 8:-423. Abstract
Bryan GJ, Hein I.  2008.  Genomic resources and tools for gene function analysis in potato. International Journal of Plant Genomics. 2008:-216513.
Nevo E, Beharav A, Meyer RC, Hackett CA, Forster BP, Russell JR, Powell W.  2005.  Genomic microsatellite adaptive divergence of wild barley by microclimatic stress in 'Evolution Canyon', Israel. Biological Journal of the Linnean Society. 84:205-224. Abstract
Pritchard L, White JA, Birch PRJ, Toth IK.  2006.  GenomeDiagram: A python package for the visualisation of large-scale genomic data. Bioinformatics. 22:616-617. Abstract
Yang S, Peng Q, Zhang Q, Zou L, Li Y, Robert C, Pritchard L, Liu H, Hovey R, Wang Q et al..  2010.  Genome-wide identifiction of HrpL-regulated genes in the necrotrophic phytopathogen Dickeya dadantii 3937. PLoS One. 5:-e13472.
Cockram J, White J, Zuluaga D, Smith D, Comadran J, Macaulay M, Luo ZW, Kearsey MJ, Werner P, Harrap D et al..  2010.  Genome-wide association mapping of morphological traits to candidate gene resolution in the un-sequenced barley genome. Proceedings of the National Academy of Sciences, USA. 107:21611-21616.
Rostoks N, Mudie S, Cardle L, Russell JR, Ramsay L, Booth A, Svensson JT, Wanamaker SI, Walia H, Rodriguez EM et al..  2005.  Genome wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics. 274:515-527springerlink.com/content/7625g78880706u6m/fulltext.pdf. Abstract
Richards S, Gibbs RA, Gerardo NM, Moran N, Nakabachi A, Stern D, Tagu D, Wilson ACC, Muzny D, Kovar C et al..  2010.  Genome sequence of the pea aphid Acyrthosiphon pisum. PLOS Biology. 8:-e1000313.
Abad P, Gouzy J, Aury JM, Castagnone-Sereno P, Danchin EGJ, Deleury E, Perfus-Barbeoch L, Anthouard V, Artiguenave F, Blok VC et al..  2008.  Genome sequence of the metazoan plant-parasitic nematode Meloidogyne incognita. Nature Biotechnology. 26:909-915.
De Maayer P, Chan WY, Venter SN, Toth IK, Birch PRJ, Joubert F, Coutinho TA.  2010.  Genome sequence of Pantoea ananatis LMG20103, the causative agent of Eucalyptus blight and dieback. Journal of Bacteriology. 192:2936-2937.
Haas BJ, Kamoun S, Zody MC, Jiang RHY, Handsaker RE, Cano LM, Grabherr M, Kodira CD, Raffaele S, Torto-Alalibo T et al..  2009.  Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans. Nature. 461:393-398.
MacFarlane SA, McGavin WJ.  2009.  Genome activation by Raspberry bushy dwarf virus coat protein. Journal of General Virology. 90:747-753.
Hopkins DW, Webster EA, Boerjan W, Pilate G, Halpin C.  2007.  Genetically modified lignin belowground. Nature Biotechnology. 25:168-169. Abstract
Obert B, Middlefell-Williams J, Millam S.  2008.  Genetic transformation of barley microspores using anther bombardment. Biotechnology Letters. 30:945-949. Abstract
Denoys-Rothan B, Chartier P, Petit A, Gordon S, Graham J, Dolan A, Hofer M, Faedi W, Malteni M, Baruzzi G et al..  2008.  Genetic resource of European small berries according to Genberry. Sodinninkyste ir Darzininkyste. 27:371-377.
M C, Crosley LK, Nicol F, Beckett GJ, Howie AF, Hill KE, Horgan GW, Mathers JC, Arthur JR, Hesketh JE.  2007.  Genetic polymorphisms in the human selenoprotein P gene determine the response of selenoprotein markers to selenium supplementation in a gender-specific manner (the SELGEN study). FASEB Journal. 21:3063-3074. Abstract
Bradshaw JE.  2009.  A genetic perspective on yield plateau in potato (Review). Potato Journal (Indian). 36:79-94.
Chesnay C, Kumar A, Pearce SR.  2007.  Genetic diversity of SIRE-1 retroelements in annual and perennial glycine species revealed using SSAP. Cellular and Molecular Biology Letters. 12:103-110. Abstract
Cooke DEL, Jung T, Williams NA, Schubert R, Osswald W, Duncan JM.  2005.  Genetic diversity of European populations of the oak fine-root pathogen Phytophthora quercina. Forest Pathology. 35:57-70. Abstract
Smykal P, Hybl M, Corander J, Jarkovsky J, Flavell AJ, Griga M.  2008.  Genetic diversity and population structure of pea (Pisum sativum L.) varieties derived from combined retrotransposon, microsatellite and morphological marker analysis. Theoretical and Applied Genetics. 117:413-424.
Jing RC, Vershinin AV, Grzebyta J, Shaw P, Smykal P, Marshall DF, Ambrose MJ, Ellis THN, Flavell AJ.  2010.  The genetic diversity and evolution of field pea (Pisum) studied by high throughput retrotransposon based insertion polymorphism (RBIP) marker analysis. BMC Evolutionary Biology. 10:-44.
Sanz AM, Gonzalez SG, Syed NH, Suso MJ, Salda CC, Flavell AJ.  2007.  Genetic diversity analysis in Vicia species using retrotransposon-based SSAP markers. Molecular Genetics and Genomics. 278:433-441. Abstract
McCallum S, Woodhead M, Hackett CA, Kassim A, Paterson A, Graham J.  2010.  Genetic and environmental effects influencing fruit colour and QTL analysis in raspberry. Theoretical and Applied Genetics. 121:611-627.
White PJ, Hammond JP, King GJ, Bowen HC, Hayden RM, Meacham MC, Spracklen WP, Broadley MR.  2010.  Genetic analysis of potassium use efficiency in Brassica oleracea. Annals of Botany. 105:1199-1210.
Kloosterman B, De Koeyer D, Griffiths R, Flinn B, Steuernagel B, Scholz U, Sonnewald S, Sonnewald U, Bryan GJ, Prat S et al..  2008.  Genes driving potato tuber initiation and growth: identification based on transcriptional changes using the POCI array. Functional & Integrative Genomics. 8:329-340. Abstract
Hein I, McLean K, Chalhoub B, Bryan GJ.  2007.  Generation and screening of a BAC library from a diploid potato clone to unravel durable late blight resistance on linkage group IV. International Journal of Plant Genomics. :-51421. Abstract
Zakri AM, Ziegler A, Torrance L, Fischer R, Commandeur U.  2010.  Generation and characterisation of a scFv against recombinant coat protein of the geminivirus Tomato leaf curl New Delhi virus. Archives of Virology. 155:335-342.
Zhang X, Johnson SN, Crawford JW, Gregory PJ, Young IM.  2007.  A general random walk model for the leptokurtic distribution of organism movement: theory and application. Ecological Modelling. 200:79-88. Abstract
Pritchard L, Corne D, Kell D, Rowland J, Winson M.  2005.  A general model of error-prone PCR. Journal of Theoretical Biology. 234:497-509. Abstract
Jing R, Johnson R, Seres A, Kiss G, Ambrose MJ, Knox MR, Ellis THN, Flavell AJ.  2007.  Gene-based sequence diversity analysis of field pea (Pisum). Genetics. 177:2263-2275. Abstract
Halpin C.  2005.  Gene stacking in transgenic plants - the challenge for 21st century plant biotechnology. Plant Biotechnology Journal. 3:141-155. Abstract
Potokina E, Druka A, Luo ZW, Wise R, Waugh R, Kearsey MJ.  2008.  Gene expression quantitative trait locus analysis of 16,000 barley genes reveals a complex pattern of genome-wide transcriptional regulation. The Plant Journal. 53:90-101. Abstract
Judelson HS, Ah Fong AMV, Aux G, Avrova AO, Bruce CR, Cakir C, da Cunha L, Grenville-Briggs LJ, Latijnhouwers M, Ligterink W et al..  2008.  Gene expression profiling during asexual development of the late blight pathogen Phytophthora infestans reveals a highly dynamic transcriptome. Molecular Plant-Microbe Interaction. 21:433-447. Abstract
Coucheney E, Daniell TJ, Chenu C, Nunan N.  2008.  Gas chromatographic metabolic profiling: A sensitive tool for functional microbial ecology. Journal of Microbiological Methods. 75:491-500. Abstract
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Griffiths BS, Hallett PD, Kuan HL, Gregory AS, Watts CW, Whitmore AP.  2008.  Functional resilience of soil microbial communities depends on both soil structure and microbial community composition. Biology and Fertility of Soils. 44:745-754. Abstract
Kuan HL, Fenwick C, Glover LA, Griffiths BS, Ritz K.  2006.  Functional resilience of microbial communities from perturbed upland grassland soils to further persistent or transient stresses. Soil Biology & Biochemistry. 38:2300-2306. Abstract
McLellan H, Gilroy EM, Yun BW, Birch PRJ, Loake GJ.  2009.  Functional redundancy in the Arabidopsis Cathepsin B gene family contributes to basal defence, the hypersensitive response and senescence. New Phytologist. 183:408-418.
Woodhead M, Weir A, Smith K, McCallum S, MacKenzie K, Graham J.  2010.  Functional markers for red raspberry. Journal of the American Society for Horticultural Science. 135:418-427.
Raven JA.  2009.  Functional evolution of photochemical energy transformations in oxygen-producing organisms. Functional Plant Biology. 36:505-515.
M C, Crosley LK, Nicol F, Horgan GW, Mathers JC, Arthur JR, Hesketh JE.  2008.  Functional effects of a common single-nucleotide polymorphism (GPX4c718t) in the glutathione peroxidase 4 gene: Interaction with sex. American Journal of Clinical Nutrition. 87:1019-1027. Abstract
Hawes C, Haughton AJ, Bohan DA, Squire GR.  2009.  Functional approaches for assessing plant and invertebrate abundance patterns in arable systems. Basic and Applied Ecology. 10:34-42. Abstract
Chen Q, Rehman S, Smant G, Jones JT.  2005.  Functional analysis of pathogenicity proteins of the potato cyst nematode Globodera rostochiensis using RNAi. Molecular Plant-Microbe Interactions. 18:621-625. Abstract
Al-Mrabeh A, Ziegler A, Cowan GH, Torrance L.  2009.  A fully recombinant ELISA using in vivo biotinylated antibody fragments for the detection of Potato leaf roll virus. Journal of Virological Methods. 159:200-205.
Artz RRE, Chapman SJ, Robertson AHJ, Potts JM, Laggoun-D F, Gogo S, Comont L, Disnar JR, Francez AJ.  2008.  FTIR spectroscopy can be used as a screening tool for organic matter quality in regenerating cutover peatlands. Soil Biology & Biochemistry. 40:515-527. Abstract
Naglreiter C, Reichenauer TG, Goodman BA, Bolh HR.  2005.  Free radical generation in Pinus sylvestris and Larix decidua seeds primed with polyethylene glycol or potassium salt solutions. Plant Physiology and Biochemistry. 43:117-123. Abstract
Forster BP, Tuvesson S, Weyen J.  2007.  Foreword: Gametic cells and molecular breeding for crop improvement. Euphytica. 158:273-274. Abstract
Krivtsov V, Liddell K, Bezginova T, Salmond R, Staines HJ, Watling R, Garside A, Thompson JA, Griffiths BS, Brendler A.  2005.  Forest litter bacteria: relationships with fungi, microfauna, and litter composition over a winter-spring period. Polish Journal of Ecology. 53:383-394. Abstract
Meier-Augenstein W, Fraser I.  2008.  Forensic isotope analysis leads to identification of a mutilated murder victim. Science and Justice. 48:153-159. Abstract
Farmer NL, Ruffell A, Meier-Augenstein W, Meneely J, Kalin RM.  2007.  Forensic analysis of wooden safety matches - a case study. Science and Justice. 47:88-98. Abstract
Porter JR, Challinor A, Ewert F, Falloon P, Fischer T, Gregory PJ, Van Ittersum MK, Olesen JE, Moore KJ, Rosenzweig C et al..  2010.  Food security: focus on agriculture. Science. 328:172-173.
Rangel-Castro JI, Prosser JI, Ostle N, Scrimgeour CM, Killham K, Meharg AA.  2005.  Flux and turnover of fixed carbon in soil microbial biomass of limed and un-limed plots of an upland grassland ecosystem. Environmental Microbiology. 7:544-552. Abstract
Osterrieder A, Carvalho CM, Latijnhouwers M, Johansen JN, Stubbs C, Botchway S, Hawes CL.  2009.  Fluorescence lifetime imaging of interactions between Golgi tethering factors and small GTPases in plants. Traffic. 10:1034-1046.
Stushnoff C, Ducreux LJM, Hancock RD, Hedley PE, Holm DG, McDougall GJ, McNicol JW, Morris J, Morris WL, Sungurtas J et al..  2010.  Flavonoid profiling and transcriptome analysis reveals new gene-metabolite correlations in tubers of Solanum tuberosum L. Journal of Experimental Botany. 61:1225-1238.
Milne I, Shaw P, Stephen G, Bayer M, Cardle L, Thomas WTB, Flavell AJ, Marshall DF.  2010.  Flapjack - graphical genotype visualization. Bioinformatics. 26:3133-3134.
Karanastasi E, Decraemer W, Kyriakopoulou PE, Neilson R.  2005.  First report of the stubby-root nematode Paratrichodorus teres associated with artichoke (Cynara scolymus) in Greece. Plant Disease. 89:-685. Abstract
Cacciola SO, Pane A, Cooke DEL, Raudino F, Magnano di San Lio G.  2006.  First report of brown rot and wilt of fennel caused by Phytophthora megasperma in Italy. Plant Disease. 90:-110. Abstract
Karanastasi E, Neilson R, Decraemer W.  2006.  First record of two trichodorid nematode species Paratrichodorus minor and Trichodorus sparsus (Nematoda: Trichodoridae Thorne 1935) from Greece. Annals of the Benaki Phytopathological Institute. 20:129-133.
Cole C, Sobala A, Lu C, Thatcher SR, Bowman A, Brown JWS, Green PJ, Barton GJ, Hutvagner G.  2009.  Filtering of deep sequencing data reveals the existence of abundant Dicer-dependent small RNAs derived from tRNAs. RNA. 15:2147-2160.
Lichner L, Hallett PD, Feeney D, Dugova O, Sir M, Tesar M.  2007.  Field measurement of soil water repellency and its impact on water flow under different vegetation. Biologia. 62:537-541. Abstract
Yeates GW, Boag B.  2006.  Female size shows similar trends in all clades of the phylum Nematoda. Nematology. 8:111-127. Abstract
Whisson SC, Avrova AO, Lavrova O, Pritchard L.  2005.  Families of short interspersed elements in the genome of the oomycete plant pathogen, Phytophthora infestans. Fungal Genetics and Biology. 42:351-365. Abstract
Low JC, Chambers J, McKelvey WAC, McKendrick IJ, Jeffrey M.  2009.  Failure to transmit scrapie infection by transferring preimplantation embryos from naturally infected donor sheep. Theriogenology. 72:809-816.
Berepiki A, Lichius A, Shoji JY, Tilsner J, Read ND.  2010.  F-actin dynamics in Neurospora crassa. Eukaryotic Cell. 9:547-557.
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Clayton SJ, Read DB, Murray PJ, Gregory PJ.  2008.  Exudation of alcohol and aldehyde sugars from roots of defoliated Lolium perenne L. grown under sterile conditions. Journal of Chemical Ecology. 34:1411-1421. Abstract
Butler A, Heffernan JE, Tawn JA, Flather RA, Horsburgh KJ.  2007.  Extreme value analysis of decadal variations in storm surge elevations. Journal of Marine Systems. 67:189-200. Abstract
Caldwell KS, Russell JR, Langridge P, Powell W.  2006.  Extreme population-dependent linkage disequilibrium detected in an inbreeding plant species, Hordeum vulgare. Genetics. 172:557-567. Abstract
White PJ, Bowen HC, Marshall B, Broadley MR.  2007.  Extraordinarily high leaf selenium to sulfur ratios define "Se-accumulator" plants. Annals of Botany. 100:111-118. Abstract
Andrews M, Maule HG, Raven JA, Mistry A.  2005.  Extension growth of Impatiens glandulifera at low irradiance: importance of nitrate and potassium accumulation. Annals of Botany. 95:641-648. Abstract
Druka A, Potokina E, Luo ZW, Jiang N, Chen XW, Kearsey MJ, Waugh R.  2010.  Expression quantitative trait loci analysis in plants. Plant Biotechnology Journal. 8:10-27.
Ducreux LJM, Morris WL, Prosser IM, Morris JA, Beale MH, Wright F, Shepherd T, Bryan GJ, Hedley PE, Taylor MA.  2008.  Expression profiling of potato germplasm differentiated in quality traits leads to the identification of candidate flavour and texture genes. Journal of Experimental Botany. 59:4219-4231. Abstract
Stadler R, Wright KM, Lauterbach C, Amon G, Gahrtz M, Feuerstein A, Oparka KJ, Sauer N.  2005.  Expression of GFP-fusions in Arabidopsis companion cells reveals non-specific protein trafficking into sieve elements and identifies a novel post-phloem domain in roots. Plant Journal. 41:319-331. Abstract
Kikuchi T, Aikawa T, Kosaka H, Pritchard L, Ogura N, Jones JT.  2007.  Expressed sequence tag (EST) analysis of the pine wood nematode Bursaphelenchus xylophilus and B. mucronatus. Molecular and Biochemical Parasitology. 155:9-17. Abstract
Chatterjee A, Horgan GW, Theobald CM.  2008.  Exposure assessment for pesticide intake from multiple food products: a Bayesian latent-variable approach. Risk Analysis. 28:1727-1736. Abstract
de Vaufleury A, Kramarz P, Binet P, Cortet J, Caul S, Andersen MN, Plumey E, Coeurdassier M, Krogh PH.  2007.  Exposure and effects assessments of Bt maize on non-target organisms (gastropod, microarthropods, mycorrhizal fungi) in a semi-field microcosm experiment. Pedobiologia. 51:185-194. Abstract
Grant OM, Tronina L, Jones HG, Chaves MM.  2007.  Exploring thermal imaging variables for the detection of stress responses in grapevine under different irrigation regimes. Journal of Experimental Botany. 58:815-825. Abstract
Roberts AMI.  2008.  Exploring relationships between phenological and weather data using smoothing. International Journal of Biometeorology. 52:463-470. Abstract
Usher KM, Bergman B, Raven JA.  2007.  Exploring cyanobacterial mutualisms. Annual Review of Ecology Evolution and Systematics. 38:255-273. Abstract
Druka A, Potokina E, Luo ZW, Bonar N, Druka I, Zhang L, Marshall DF, Steffenson BJ, Close TJ, Wise RP et al..  2008.  Exploiting regulatory variation to identify genes underlying quantitative resistance to the wheat stem rust pathogen Puccinia graminis f. sp. tritici in barley. Theoretical and Applied Genetics. 117:261-272. Abstract
Lokossou AA, Park TH, van Arkel G, Arens M, Ruyter-Spira C, Morales J, Whisson SC, Birch PRJ, Visser RGF, Jacobsen E et al..  2009.  Exploiting knowledge of R/Avr genes to rapidly clone a new LZ-NBS-LRR family of late blight resistance genes from potato linkage group IV. Molecular Plant-Microbe Interactions. 22:630-641.
Druka A, Franckowiak JD, Lundqvist U, Bonar N, Alexander J, Guzy-Wrobelska J, Ramsay L, Druka I, Grant I, Macaulay M et al..  2010.  Exploiting induced variation to dissect quantitative traits in barley. Biochemical Society Transactions. 38:683-688.
Zazzo A, Harrison SM, Bahar B, Moloney AP, Monahan FJ, Scrimgeour CM, Schmidt O.  2007.  Experimental determination of dietary carbon turnover in bovine hair and hoof. Canadian Journal of Zoology. 85:1239-1248. Abstract
Tattersall RJ, Prashar A, Singh KD, Tokarczuk PF, Erichsen JT, Hocking PM, Guggenheim JA.  2010.  Ex vivo magnetic resonance imaging of crystalline lens dimensions in chicken. Molecular Vision. 16:144-153.
Watanabe T, Broadley MR, Jansen S, White PJ, Takada J, Satake K, Takamatsu T, Tuah SJ, Osaki M.  2007.  Evolutionary control of leaf element composition in plants. New Phytologist. 174:516-523. Abstract
Raven JA, Andrews M.  2010.  Evolution of tree nutrition. Tree Physiology. 30:1050-1071.
Cock PJA, Whitworth DE.  2010.  Evolution of relative reading frame bias in unidirectional prokaryotic gene overlaps. Molecular Biology and Evolution. 27:753-756.
Raven JA, Andrews M, Quigg A.  2005.  The evolution of oligotrophy: implications for the breeding of crop plants for low input agricultural systems. Annals of Applied Biology. 146:261-280. Abstract
Raven JA, Cockell CS, de La Rocha CL.  2008.  The evolution of inorganic carbon concentrating mechanisms in photosynthesis. Philosophical Transactions of the Royal Society of London B - Biological Sciences. 363:2641-2650. Abstract
Kanyuka K, Druka A, Caldwell DG, Tymon A, McCallum N, Waugh R, Adams MJ.  2005.  Evidence that the recessive bymovirus resistance locus rym4 in barley corresponds to the eukaryotic translation initiation factor 4E gene. Molecular Plant Pathology. 6:449-458. Abstract
Broadley MR, White PJ, Hammond JP, Graham NS, Bowen HC, Emmerson ZF, Fray RG, Iannetta PPM, McNicol JW, May ST.  2008.  Evidence of neutral transcriptome evolution in plants. New Phytologist. 180:587-593. Abstract
Thiel T, Graner A, Waugh R, Grosse I, Close TJ, Stein N.  2009.  Evidence and evolutionary analysis of ancient whole-genome duplication in barley predating the divergence from rice. BMC Evolutionary Biology. 9:-209.
Cousens C, Graham M, Sales J, Dagleish MP.  2008.  Evaluation of the efficacy of clinical diagnosis of ovine pulmonary adenocarcinoma. Veterinary Record. 162:88-90. Abstract
Cortet J, Griffiths BS, Bohanec M, Demsar D, Andersen MN, Caul S, Birch ANE, Pernin C, Tabone E, de Vaufleury A et al..  2007.  Evaluation of effects of transgenic Bt maize on microarthropods in a European multi-site experiment. Pedobiologia. 51:207-218. Abstract
Ashman MR, Hallett PD, Brookes PC, Allen J.  2009.  Evaluating soil stabilisation by biological processes using step-wise aggregate fractionation. Soil and Tillage Research. 102:209-215.
Fyfe CL, Stewart J, Murison SD, Jackson DM, Rance K, Speakman JR, Horgan GW, Johnstone AM.  2010.  Evaluating energy intake measurement in free-living subjects: when to record and for how long? Public Health Nutrition. 13:172-180.
Iannetta PPM, Laarhoven L-J, Medina-Escobar N, James EK, McManus MT, Davies HV, Harren FJM.  2006.  Ethylene and carbon dioxide production by developing strawberries show a correlative pattern that is indicative of ripening climacteric fruit. Physiologia Plantarum. 127:247-259. Abstract
Nuopponen M, Birch GM, Sykes R, Lee S, Stewart D.  2006.  Estimation of wood density and chemical composition by means of Diffuse Reflectance Mid-Infrared Fourier Transform (DRIFT-MIR) spectroscopy. Journal of Agricultural and Food Chemistry. 54:34-40. Abstract
Cook AR, Otten W, Marion G, Gibson GJ, Gilligan CA.  2007.  Estimation of multiple transmission rates for epidemics in heterogeneous populations. Proceedings of the National Academy of Sciences, USA. 104:20392-20397. Abstract
Casa R, Baret F, Buis S, Lopez-Lozano R, Pascucci S, Palombo A, Jones HG.  2010.  Estimation of maize canopy properties from remote sensing by inversion of 1-D and 4-D models. Precision Agriculture. 11:319-334.
Roberts TJ, McKenna SJ, Du CJ, Wuyts N, Valentine TA, Bengough AG.  2010.  Estimating the motion of plant root cells from in vivo confocal laser scanning microscopy images. Machine Vision and Applications. 21:921-939.
Cornulier T, Elston DA, Arcese P, Benton TG, Douglas DJT, Lambin X, Reid J, Robinson RA, Sutherland WJ.  2009.  Estimating the annual number of breeding attempts from breeding dates using mixture models. Ecology Letters. 12:1184-1193.
Leinonen I, Grant OM, Tagliavia CPP, Chaves MM, Jones HG.  2006.  Estimating stomatal conductance with thermal imagery. Plant Cell and Environment. 29:1508-1518.
Dziva F, Mahajan A, Cameron P, Currie C, McKendrick IJ, Wallis TS, Smith DGE, Stevens MP.  2007.  EspP, a type V-secreted serine protease of enterohaemorrhagic Escherichia coli O157:H7, influences intestinal colonization of calves and adherence to bovine primary intestinal epithelial cells. FEMS Microbiology Letters. 271:258-264. Abstract
Venkatesh B, Babujee L, Liu H, Hedley PE, Fujikawa T, Birch PRJ, Toth IK, Tsuyumu S.  2006.  Erwinia chrysanthemi 3937 PhoQ sensor kinase regulates several virulence determinants. Journal of Bacteriology. 188:3088-3098. Abstract
Le Gall O, Sanfacon H, Ikegami M, Iwanami T, Jones AT, Karasev A, Lehto K, Wellink J, Wetzel T, Yoshikawa N.  2009.  Erratum: Cheravirus and Sadwavirus: two unassigned genera of plant positive-sense single-stranded RNA viruses formerly considered atypical members of the genus Nepovirus (family Comoviridae). Archives of Virology. 154:1019-1019.
Chen XW, Hackett CA, Niks RE, Hedley PE, Booth C, Druka A, Marcel TC, Vels A, Bayer M, Milne I et al..  2010.  An eQTL analysis of partial resistance to Puccinia hordei in barley. PLoS One. 5:-e8598.
Hopkins DW, Sparrow AD, Shillam LL, English LC, Dennis PG, Novis P, Elberling B, Gregorich EG, Greenfield LG.  2008.  Enzymatic activities and microbial communities in an Antarctic dry valley soil: Responses to C and N supplementation. Soil Biology & Biochemistry. 40:2130-2136. Abstract
Kassim A, Poette J, Paterson A, Zait D, McCallum S, Woodhead M, Smith K, Hackett CA, Graham J.  2009.  Environmental and seasonal influences on red raspberry anthocyanin antioxidant contents and identification of quantitative traits loci (QTL). Molecular Nutrition and Food Research. 53:625-634. Abstract
Nielson UN, Osler GHR, Campbell CD, Neilson R, Burslem DFRP, van der Wal R.  2010.  The enigma of soil animal species diversity revisited: the role of small-scale heterogeneity. PLoS One. 5:-e11567.
Shams-Bakhsh M, Canto T, Palukaitis P.  2007.  Enhanced resistance and neutralization of defense responses by suppressors of RNA silencing. Virus Research. 130:103-109. Abstract
Morris WL, Ducreux LJM, Fraser PD, Millam S, Taylor MA.  2006.  Engineering ketocarotenoid biosynthesis in potato tubers. Metabolic Engineering. 8:253-263. Abstract
Waugh R, Jannink JL, Muehlbauer GJ, Ramsay L.  2009.  The emergence of whole genome association scans in barley. Current Opinion in Plant Biology. 12:218-222.
Johnson SN, McNicol JW.  2010.  Elevated CO2 and aboveground-belowground herbivory by the clover root weevil. Oecologia. 162:209-216.
Grenville-Briggs LJ, Avrova AO, Bruce CR, Williams A, Whisson SC, Birch PRJ, van West P.  2005.  Elevated amino acid biosynthesis in Phytophthora infestans during appressorium formation and potato infection. Fungal Genetics and Biology. 42:244-256. Abstract
Low JN, Scrimgeour CM, Horton P.  2005.  Elaidic acid, (trans-9-octadecenoic acid). Acta Crystallographica Section E-Structure Reports Online. E61:3730-3732. Abstract
Johnson SN, Zhang X, Crawford JW, Gregory PJ, Young IM.  2007.  Egg hatching and survival time of soil-dwelling insect larvae: a partial differential equation model and experimental validation. Ecological Modelling. 202:493-502. Abstract
Ravirala RS, Barabote RD, Wheeler DM, Reverchon S, Tatum O, Malouf J, Liu H, Pritchard L, Hedley PE, Birch PRJ et al..  2007.  Efflux pump gene expression in Erwinia chrysanthemi is induced by exposure to phenolic acids. Molecular Plant-Microbe Interactions. 20:313-320. Abstract
Broadley MR, Hammond JP, White PJ, Salt DE.  2010.  An efficient procedure for normalising ionomics data for Arabidopsis thaliana. New Phytologist. 186:270-274.
Hensel G, Valkov V, Middlefell-Williams J, Kumlehn J.  2008.  Efficient generation of transgenic barley: The way forward to modulate plant-microbe interactions. Journal of Plant Physiology. 165:71-82. Abstract
Glasbey CA, Khondoker MR.  2009.  Efficiency of functional regression estimators for combining multiple laser scans of cDNA microarrays. Biometrical Journal. 51:45-55.
Bohan DA, Boffey CWH, Brooks DR, Clark SJ, Dewar AM, Firbank LG, Haughton AJ, Hawes C, Heard MS, May MJ et al..  2005.  Effects on weed and invertebrate abundance and diversity of herbicide management in genetically modified herbicide-tolerant winter-sown oilseed rape. Proceedings of the Royal Society of London, Series B. 272:463-474. Abstract
Kindred DR, Verhoeven TMO, Weightman RM, Swanston JS, Agu RC, Brosnan JM, Sylvester-Bradley R.  2008.  Effects of variety and fertiliser nitrogen on alcohol yield, grain yield, starch and protein content, and protein composition of winter wheat. Journal of Cereal Science. 48:46-57. Abstract
Newton AC, Guy DC.  2009.  The effects of uneven patchy cultivar mixtures on disease control and yield in winter barley. Field Crops Research. 110:225-228. Abstract
Heard MS, Clark SJ, Rothery P, Perry JN, Bohan DA, Brooks DR, Champion GT, Dewar AM, Hawes C, Haughton AJ et al..  2006.  Effects of successive seasons of genetically modified herbicide-tolerant maize cropping on weeds and invertebrates. Annals of Applied Biology. 149:249-254. Abstract
Shepherd T, Griffiths DW.  2006.  The effects of stress on plant epicuticular waxes. New Phytologist. 171:469-499. Abstract
Bruneau PMC, Davidson DA, Grieve IC, Young IM, Nunan N.  2005.  The effects of soil horizons and faunal excrement on bacterial distribution in an upland grassland soil. FEMS Microbiology Ecology. 52:139-144. Abstract
Johnson SN, Gregory PJ, McNicol JW, Oodally Y, Zhang XX, Murray PJ.  2010.  Effects of soil conditions and drought on egg hatching and larval survival of the clover root weevil (Sitona lepidus). Applied Soil Ecology. 44:75-79.
Griffiths DW, Dale MFB, Morris WL, Ramsay G.  2007.  Effects of season and postharvest storage on the carotenoid content of Solanum phureja potato tubers. Journal of Agricultural and Food Chemistry. 55:379-385. Abstract
Hinojosa MB, Carreira JA, Rodr JM, Garc R.  2008.  Effects of pyrite sludge pollution on soil enzyme activities: Ecological dose-response model. Science of the Total Environment. 396:89-99. Abstract
Stoleriu I, Davidson FA, Liu J.  2005.  Effects of periodic input on the quasi-steady state: assumptions for enzyme-catalysed reaction. Journal of Mathematical Biology. 50:115-132.
Davidson RS, Marion G, Hutchings MR.  2008.  Effects of host social hierarchy on disease persistence. Journal of Theoretical Biology. 253:424-433. Abstract
Brown KL, Wathne GJ, Sales J, Bruce ME, Mabbott NA.  2009.  The effects of host age on follicular dendritic cell status dramatically impair scrapie agent neuroinvasion in aged mice. Journal of Immunology. 183:5199-5207.
Smith LA, Wells KL, Marion G, Swain DL, Hutchings MR.  2010.  Effects of group composition on the grazing behaviour of herbivores. Animal Behaviour. 80:527-534.
Firbank LG, Rothery P, May MJ, Clark SJ, Scott RJ, R.C. S, Boffey CWH, Brooks DR, Champion GT, Haughton AJ et al..  2006.  Effects of genetically modified herbicide-tolerant cropping systems on weed seedbanks in two years of following crops. Biology Letters. 2:140-143. Abstract
Murillo-Amador B, Jones HG, Kaya C, Aguilar RL, Garcia-Hernandez JL, Troyo-Di E, Avila-Serrano NY, Rueda-Puente E.  2006.  Effects of foliar application of calcium nitrate on growth and physiological attributes of cowpea (Vigna unguiculata L.Walp.) grown under salt stress. Environmental and Experimental Botany. 58:188-196.
Wojciechowski T, Gooding MJ, Ramsay L, Gregory PJ.  2009.  The effects of dwarfing genes on seedling root growth of wheat. Journal of Experimental Botany. 60:2565-2573.
Goodman BA, Newton AC.  2005.  Effects of drought stress and its sudden relief on free radical processes in barley. Journal of the Science of Food and Agriculture. 85:47-53. Abstract
Johnson SN, Zhang X, Crawford J, Gregory PJ, Hix N, Jarvis S, Murray PJ, Young IM.  2006.  Effects of CO2 on the searching behaviour of the root-feeding clover weevil Sitona lepidus (Coleoptera: Curculionidae). Bulletin of Entomological Research. 96:361-366. Abstract
Moragues M, Comadran J, Waugh R, Milne I, Flavell AJ, Russell JR.  2010.  Effects of ascertainment bias and marker number on estimations of barley diversity from high-throughput SNP genotype data. Theoretical and Applied Genetics. 120:1525-1534.
Lehesranta SJ, Koistinen KM, Massat N, Davies HV, Shepherd LVT, McNicol JW, Cakmak I, Cooper J, Luck L, K SO et al..  2007.  Effects of agricultural production systems and their components on protein profiles of potato tubers. Proteomics. 7:597-604. Abstract
Boag B, Neilson R, Scrimgeour CM.  2006.  The effect of starvation on the planarian Arthurdendyus triangulatus (Tricladida: Terricola) as measured by stable isotopes. Biology and Fertility of Soils. 43:267-270. Abstract
van de Graaf P, Lees AK, Wale SJ, Duncan AJ.  2005.  Effect of soil inoculum level and environmental factors on potato powdery scab caused by Spongospora subterranea. Plant Pathology. 54:22-28. Abstract
Chloupek O, Forster BP, Thomas WTB.  2006.  The effect of semi-dwarf genes on root system size in field-grown barley. Theoretical and Applied Genetics. 112:779-786. Abstract
Vysotskaya LB, Hedley PE, Sharipova G, Veselov D, Kudoyarova G, Morris JA, Jones HG.  2010.  Effect of salinity on water relations of wild barley plants differing in salt tolerance. AoB Plants. :-plq006.
Wemelsfelder F, Nevison IM, Lawrence AB.  2009.  The effect of perceived environmental background on qualitative assessments of pig behaviour. Animal Behaviour. 78:477-484.
Ouellet DR, Berthiaume R, Holtrop G, Lobley GE, Martineau R, Lapierre H.  2010.  Effect of method of conservation of timothy on endogenous nitrogen flows in lactating dairy cows. Journal of Dairy Science. 93:4252-4261.
Gregory AS, Watts CW, Griffiths BS, Hallett PD, Kuan HL, Whitmore AP.  2009.  The effect of long-term soil management on the physical and biological resilience of a range of arable and grassland soils in England. Geoderma. 153:172-185.
Ramirez-Farias C, Slezak K, Fuller Z, Duncan A, Holtrop G, Louis P.  2009.  Effect of inulin on the human gut microbiota: stimulation of Bifidobacterium adolescentis and Faecalibacterium prausnitzii. British Journal of Nutrition. 101:541-550.
Tighe P, Duthie GG, Vaughan N, Brittenden J, Simpson WG, Duthie S, Mutch W, Wahle K, Horgan GW, Thies F.  2010.  Effect of increased consumption of whole-grain foods on blood pressure and other cardiovascular risk markers in healthy middle-aged persons: a randomised controlled trial. American Journal of Clinical Nutrition. 94:733-740.
Pawlett M, Hopkins DW, Moffett BF, Harris JA.  2009.  The effect of earthworms and liming on soil microbial communities. Biology and Fertility of Soils. 45:361-369. Abstract
McDougall GJ, Dobson P, Jordan-Mahy N.  2010.  Effect of different cooking regimes on rhubarb polyphenols. Food Chemistry. 119:758-764.
Andersen HS, Gambling L, Holtrop G, McArdle HJ.  2007.  Effect of dietary copper deficiency on iron metabolism in the pregnant rat. British Journal of Nutrition. 97:239-246. Abstract
Zazzo A, Moloney AP, Monahan FJ, Scrimgeour CM, Schmidt O.  2008.  Effect of age and food intake on dietary carbon turnover recorded in sheep wool. Rapid Communications in Mass Spectrometry. 22:2937-2945. Abstract
Sneddon AA, Tsofliou F, Fyfe CL, Matheson I, Jackson DM, Horgan GW, Winzell MS, Wahle KWJ, Ahren B, Williams LM.  2008.  Effect of a conjugated linoleic acid and omega-3 fatty acid mixture on body composition and adiponectin. Obesity. 16:1019-1024. Abstract
Chope GA, Terry LA, White PJ.  2007.  The effect of 1-methylcyclopropene (1-MCP) on the physical and biochemical characteristics of onion cv. SS1 bulbs during storage. Postharvest Biology and Technology. 44:131-140. Abstract
Wypijewski K, Hornyik C, Shaw JA, Stephens J, Goraczniak R, Gunderson SI, Lacomme C.  2009.  Ectopic 5' splice sites inhibit gene expression by engaging RNA surveillance and silencing pathways in plants. Plant Physiology. 151:955-965.
Wookey PA, Aerts R, Bardgett RD, Baptist F, Brathan KA, Cornelissen JHC, Gough L, Hartley IP, Hopkins DW, Lavorerl S et al..  2009.  Ecosystem feedbacks and cascade processes: understanding their role in the responses of Arctic and alpine ecosystems to environmental change. Global Change Biology. 15:1153-1172. Abstract
Krivtsov V, Garside A, Bezginova T, Thompson J, Palfreyman JW, Salmond R, Liddell K, Brendler A, Griffiths BS, Watling R et al..  2006.  Ecological study of the forest litter meiofauna of a unique Scottish woodland. Animal Biology. 56:69-93. Abstract
Krivtsov V, Bezginova T, Salmond R, Liddell K, Garside A, Thompson J, Palfreyman JW, Staines HJ, Brendler A, Griffiths BS et al..  2006.  Ecological interactions between fungi, other biota and forest litter composition in a unique Scottish woodland. Forestry. 79:201-216. Abstract
Krogh PH, Griffiths BS.  2007.  ECOGEN - Soil ecological and economic evaluation of genetically modified crops. Pedobiologia. 51:171-173. Abstract
Broadley MR, White PJ.  2010.  Eats roots and leaves. Can edible horticultural crops address dietary calcium, magnesium and potassium deficiencies? Proceedings of the Nutrition Society. 69:601-612.
Yang D, Zhang T, Zhang K, Greenwood DJ, Hammond JP, White PJ.  2009.  An easily implemented agro-hydrological procedure with dynamic root simulation for water transfer in the crop-soil system: Validation and application. Journal of Hydrology. 370:177-190. Abstract
Barr P, McKenzie BM, Hallett PD.  2009.  Earthworms bring compacted and loose soils to a similar mechanical state. Soil Biology & Biochemistry. 41:656-658. Abstract
El Zemrany H, Czarnes S, Hallett PD, Alamercery S, Bally R, Monrozier LJ.  2007.  Early changes in root characteristics of maize (Zea mays) following seed inoculation with the PGPR Azospirillum lipoferum CRT1. Plant and Soil. 291:109-118. Abstract
de Felipe P, Luke GA, Hughes LE, Gani D, Halpin C, Ryan MD.  2006.  E unum pluribus: multiple proteins from a self-processing polyprotein. Trends in Biotechnology. 24:68-75. Abstract
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Dupuy L, Vignes M, McKenzie BM, White PJ.  2010.  The dynamics of root meristem distribution in the soil. Plant Cell and Environment. 33:358-369.
Koroleva OA, Calder G, Pendle AF, Kim S-H, Lewandowska D, Simpson CG, Jones IM, Brown JWS, Shaw PJ.  2009.  Dynamic behaviour of Arabidopsis eIF4A-III, putative core protein of exon junction complex: fast relocation to nucleolus and splicing speckles under hypoxia. Plant Cell. 21:1592-1606.
Simons V, Morrissey JP, Latijnhouwers M, Csukai M, Cleaver A, Yarrow C, Osborn A.  2006.  Dual effects of plant steroidal alkaloids on Saccharomyces cerevisiae. Antimicrobial Agents and Chemotherapy. 50:2732-2740.
Coulthurst SJ, Lilley KS, Hedley PE, Liu H, Toth IK, Salmond GPC.  2008.  DsbA plays a critical and multifaceted role in the production of secreted virulence factors by the phytopathogen, Erwinia carotovora subsp. atroseptica. Journal of Biological Chemistry. 283:23739-23753. Abstract
van Haren JLM, Handley LL, Biel KY, Kudeyarov VN, McLain JET, Martens DA, Colodner DC.  2005.  Drought-induced nitrous oxide flux dynamics in an enclosed tropical forest. Global Change Biology. 11:1247-1257. Abstract
Button DK, Gartland KMA, Ball LD, Natanson L, Gartland JS, Lyon GD.  2006.  DRASTIC-INSIGHTS: Querying information in a plant gene expression database. Nucleic Acids Research. 34:D712-D716. Abstract
Szarejko I, Forster BP.  2007.  Doubled haploidy and induced mutation. Euphytica. 158:359-370. Abstract
Forster BP, Thomas WTB.  2005.  Doubled haploids in genetics and plant breeding. Plant Breeding Reviews. 25:57-80. Abstract
Wang J, Zhang X, Bengough AG, Crawford JW.  2005.  Domain-decomposition method for parallel lattice Boltzmann simulation of incompressible flow in porous media. Physical Review E. 72:016706-1-016706-11. Abstract
Makarov VV, Rybakova EN, Efimov AV, Dobrov EN, Serebryakova MV, Solovyev AG, Yaminsky IV, Taliansky ME, Morozov SV, Kalinina NO.  2009.  Domain organization of the N-terminal portion of hordeivirus movement protein TGBp1. Journal of General Virology. 90:3022-3032.
Zhang B, Deng H, Wang HL, Yin R, Hallett PD, Griffiths BS, Daniell TJ.  2010.  Does microbial habitat or community structure drive the functional stability of microbes to stresses following re-vegetation of a severely degraded soil? Soil Biology and Biochemistry. 42:850-859.
Foereid B, Bellarby J, Meier-Augenstein W, Kemp HF.  2010.  Does light exposure make plant litter more degradable? Plant and Soil. 333:275-285.

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The James Hutton Research Institute is the result of the merger in April 2011 of MLURI and SCRI. This merger formed a new powerhouse for research into food, land use, and climate change.