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2005
van de Graaf P, Lees AK, Wale SJ, Duncan AJ.  2005.  Effect of soil inoculum level and environmental factors on potato powdery scab caused by Spongospora subterranea. Plant Pathology. 54:22-28. Abstract
Goodman BA, Newton AC.  2005.  Effects of drought stress and its sudden relief on free radical processes in barley. Journal of the Science of Food and Agriculture. 85:47-53. Abstract
Stoleriu I, Davidson FA, Liu J.  2005.  Effects of periodic input on the quasi-steady state: assumptions for enzyme-catalysed reaction. Journal of Mathematical Biology. 50:115-132.
Bruneau PMC, Davidson DA, Grieve IC, Young IM, Nunan N.  2005.  The effects of soil horizons and faunal excrement on bacterial distribution in an upland grassland soil. FEMS Microbiology Ecology. 52:139-144. Abstract
Gomes F, Carr MKV, Squire GR.  2005.  Effects of water availability and vine harvesting frequency on the productivity of sweet potato in Southern Mozambique. IV. Radiation, interception, dry matter production and partitioning. Experimental Agriculture. 41:93-108. Abstract
Bohan DA, Boffey CWH, Brooks DR, Clark SJ, Dewar AM, Firbank LG, Haughton AJ, Hawes C, Heard MS, May MJ et al..  2005.  Effects on weed and invertebrate abundance and diversity of herbicide management in genetically modified herbicide-tolerant winter-sown oilseed rape. Proceedings of the Royal Society of London, Series B. 272:463-474. Abstract
Low JN, Scrimgeour CM, Horton P.  2005.  Elaidic acid, (trans-9-octadecenoic acid). Acta Crystallographica Section E-Structure Reports Online. E61:3730-3732. Abstract
Grenville-Briggs LJ, Avrova AO, Bruce CR, Williams A, Whisson SC, Birch PRJ, van West P.  2005.  Elevated amino acid biosynthesis in Phytophthora infestans during appressorium formation and potato infection. Fungal Genetics and Biology. 42:244-256. Abstract
Kanyuka K, Druka A, Caldwell DG, Tymon A, McCallum N, Waugh R, Adams MJ.  2005.  Evidence that the recessive bymovirus resistance locus rym4 in barley corresponds to the eukaryotic translation initiation factor 4E gene. Molecular Plant Pathology. 6:449-458. Abstract
Raven JA, Andrews M, Quigg A.  2005.  The evolution of oligotrophy: implications for the breeding of crop plants for low input agricultural systems. Annals of Applied Biology. 146:261-280. Abstract
Stadler R, Wright KM, Lauterbach C, Amon G, Gahrtz M, Feuerstein A, Oparka KJ, Sauer N.  2005.  Expression of GFP-fusions in Arabidopsis companion cells reveals non-specific protein trafficking into sieve elements and identifies a novel post-phloem domain in roots. Plant Journal. 41:319-331. Abstract
Andrews M, Maule HG, Raven JA, Mistry A.  2005.  Extension growth of Impatiens glandulifera at low irradiance: importance of nitrate and potassium accumulation. Annals of Botany. 95:641-648. Abstract
2006
Rosen K, Shand CA, Haak E, Cheshire MV.  2006.  Effect of clay content and wetting and drying on radiocaesium behaviour in a peat and peaty podzol. The Science of the Total Environment. 368(2-3):795-803.
Gardner DS, Van Bon BWN, Dandrea J, Goddard PJ, May SF, Wilson V, Stephenson T, Symonds ME.  2006.  Effect of periconceptual undernutrition and gender on hypothalamic-pituitary-adrenal axis function in young adult sheep. Journal of Endocrinology. 190(2):203-212.
Wright IA, Jones JR, Davies DA, Davidson GR, Vale JE.  2006.  The effect of sward surface height on the response to mixed grazing by cattle and sheep. Animal Science. 82:271-276.
Nielsen UN, Riis T, Brix H.  2006.  The effect of weed cutting on Luronium natans. Aquatic Conservation: Marine and Freshwater Ecosystems. 16(4):409-417.
Patra AK, Abbadie L, Clays-Josserand A, Degrange V, Grayston SJ, Guillaumaud N, Loiseau P, Louault F, Mahmood S, Nazaret S et al..  2006.  Effects of management regime and plant species on the enzyme activity and genetic structure of N-fixing, denitrifying and nitrifying bacterial communities in grassland soils. Environmental Microbiology. 8(6):1005-1016.
Lea RG, Pinto de Andrade L, Rae MT, Hannah LT, Kyle CE, Murray JF, Rhind SM, Miller DW.  2006.  Effects of maternal undernutrition during early pregnancy on apoptosis regulators in the ovine fetal ovary. Reproduction. 131(1):113-124.
Frak E, LeRoux X, Millard P, Guillaume S, Wendler R.  2006.  Effects of N availability, local light regieme and leaf rank on the amount and sources of N allocated within the foliage of walnut (Jugulans nigra x regia). Tree Physiology. 26:43-49.
Rhind SM, Kyle CE, Riach DJ, Duff EI.  2006.  Effects of nutrition on hormone profiles and patterns of deiodinase activity in the skin and associated patterns of hair follicle activity and moult in cashmere goats. Animal Science. 82:723-730.
Shand CA, Coutts G.  2006.  The effects of sheep faeces on soil solution composition. Plant and Soil. 285(1-2):135-148.
Ghorbani J, McAllister HA, Pakeman RJ, Marrs RH, Le Duc MG.  2006.  Effects of the litter layer of Pteridium aquilinum on seed under experimental restoration. Applied Vegetation Science. 9(1):127-136.
Thwaites RH, Ashmore MR, Morton AJ, Pakeman RJ.  2006.  The effects of tropospheric ozone on the species dynamics of calcareous grassland. Environmental Pollution. 144(2):500-509.
Izumi H, Anderson IC, Alexander IJ, Killham K, Moore ERB.  2006.  Endobacteria in some ectomycorrhiza of Scots pine (Pinus sylvestris). FEMS Microbiology Ecology. 56(1):34-43.
Porteous Moore F, Barac B, Borremans B, Oeyen L, Campbell CD, Vangronsveld J, van der Lelie D, Moore ERB.  2006.  Endophytic bacterial diversity in poplar trees growing on a btex-contaminated site: the characterisation of isolates with potential to enhance phytoremediation. Systematic and Applied Microbiology. 29(7):539-556.
Harmel RD, Cooper RJ, Slade RM, Green CH, Haney RL, Arnold JG.  2006.  Error propagation in measured streamflow and water quality data for small rural watersheds. Transactions of the American Society of Agricultural Engineers. 49:689-701.
Shafi S, Sweetman A, Hough RL, Smith R, Rosevear A, Pollard SJT.  2006.  Evaluating fugacity models for trace components in landfill gas. Environmental Pollution. 144:1013-1023.
Rivington M, Matthews KB, Buchan K, Bellocchi G.  2006.  Evaluating uncertainty introduced to process-based simulation model estimates by alternative sources of meteorological data. Agricultural Systems. 88(2-3):451-461.
Evans CD, Reynolds B, Jenkins A, Helliwell RC, Curtis CJ, Goodale CL, Ferrier RC, Emmett BA, Pilkington M, Caporn SJM et al..  2006.  Evidence that soil carbon pool determines susceptibility of semi-natural ecosystems to elevated nitrogen leaching. Ecosystems. 9(3):453-462.
Pakeman RJ, Beaton JK, Thoss V, Lennon JJ, Campbell CD, White D, Iason GR.  2006.  The extended phenotype of Scots pine (Pinus sylvestris) structures the understorey assemblage. Ecography. 29(3):451-457.
de Felipe P, Luke GA, Hughes LE, Gani D, Halpin C, Ryan MD.  2006.  E unum pluribus: multiple proteins from a self-processing polyprotein. Trends in Biotechnology. 24:68-75. Abstract
Krivtsov V, Bezginova T, Salmond R, Liddell K, Garside A, Thompson J, Palfreyman JW, Staines HJ, Brendler A, Griffiths BS et al..  2006.  Ecological interactions between fungi, other biota and forest litter composition in a unique Scottish woodland. Forestry. 79:201-216. Abstract
Krivtsov V, Garside A, Bezginova T, Thompson J, Palfreyman JW, Salmond R, Liddell K, Brendler A, Griffiths BS, Watling R et al..  2006.  Ecological study of the forest litter meiofauna of a unique Scottish woodland. Animal Biology. 56:69-93. Abstract
Chloupek O, Forster BP, Thomas WTB.  2006.  The effect of semi-dwarf genes on root system size in field-grown barley. Theoretical and Applied Genetics. 112:779-786. Abstract
Boag B, Neilson R, Scrimgeour CM.  2006.  The effect of starvation on the planarian Arthurdendyus triangulatus (Tricladida: Terricola) as measured by stable isotopes. Biology and Fertility of Soils. 43:267-270. Abstract
Johnson SN, Zhang X, Crawford J, Gregory PJ, Hix N, Jarvis S, Murray PJ, Young IM.  2006.  Effects of CO2 on the searching behaviour of the root-feeding clover weevil Sitona lepidus (Coleoptera: Curculionidae). Bulletin of Entomological Research. 96:361-366. Abstract
Murillo-Amador B, Jones HG, Kaya C, Aguilar RL, Garcia-Hernandez JL, Troyo-Di E, Avila-Serrano NY, Rueda-Puente E.  2006.  Effects of foliar application of calcium nitrate on growth and physiological attributes of cowpea (Vigna unguiculata L.Walp.) grown under salt stress. Environmental and Experimental Botany. 58:188-196.
Firbank LG, Rothery P, May MJ, Clark SJ, Scott RJ, R.C. S, Boffey CWH, Brooks DR, Champion GT, Haughton AJ et al..  2006.  Effects of genetically modified herbicide-tolerant cropping systems on weed seedbanks in two years of following crops. Biology Letters. 2:140-143. Abstract
Shepherd T, Griffiths DW.  2006.  The effects of stress on plant epicuticular waxes. New Phytologist. 171:469-499. Abstract
Heard MS, Clark SJ, Rothery P, Perry JN, Bohan DA, Brooks DR, Champion GT, Dewar AM, Hawes C, Haughton AJ et al..  2006.  Effects of successive seasons of genetically modified herbicide-tolerant maize cropping on weeds and invertebrates. Annals of Applied Biology. 149:249-254. Abstract
Morris WL, Ducreux LJM, Fraser PD, Millam S, Taylor MA.  2006.  Engineering ketocarotenoid biosynthesis in potato tubers. Metabolic Engineering. 8:253-263. Abstract
Venkatesh B, Babujee L, Liu H, Hedley PE, Fujikawa T, Birch PRJ, Toth IK, Tsuyumu S.  2006.  Erwinia chrysanthemi 3937 PhoQ sensor kinase regulates several virulence determinants. Journal of Bacteriology. 188:3088-3098. Abstract
Leinonen I, Grant OM, Tagliavia CPP, Chaves MM, Jones HG.  2006.  Estimating stomatal conductance with thermal imagery. Plant Cell and Environment. 29:1508-1518.
Nuopponen M, Birch GM, Sykes R, Lee S, Stewart D.  2006.  Estimation of wood density and chemical composition by means of Diffuse Reflectance Mid-Infrared Fourier Transform (DRIFT-MIR) spectroscopy. Journal of Agricultural and Food Chemistry. 54:34-40. Abstract
Iannetta PPM, Laarhoven L-J, Medina-Escobar N, James EK, McManus MT, Davies HV, Harren FJM.  2006.  Ethylene and carbon dioxide production by developing strawberries show a correlative pattern that is indicative of ripening climacteric fruit. Physiologia Plantarum. 127:247-259. Abstract
Caldwell KS, Russell JR, Langridge P, Powell W.  2006.  Extreme population-dependent linkage disequilibrium detected in an inbreeding plant species, Hordeum vulgare. Genetics. 172:557-567. Abstract
2007
Devereux G, McNeill G, Newman G, Turner S, Craig L, Martindale S, Helms P, Seaton A.  2007.  Early childhood wheezing symptoms in relation to plasma selenium in pregnant mothers and neonates. Clinical and Experimental Allergy. 37:1000-1008.
Small LA.  2007.  East meets West: Utilising western literature to conceptualise post-Soviet agrarian change. Journal of Peasant Studies. 34(1):29-50.
Fransson PMA, Anderson IC, Alexander IJ.  2007.  Ectomycorrhizal fungi in culture respond differently to increased carbon availability. FEMS Microbiology Ecology. 61(2):246-257.
Anderson IC, Cairney JWG.  2007.  Ectomycorrhizal fungi: exploring the mycelial frontier. FEMS Microbiology Reviews. 31(4):388-406.
Singh BK, Tate KR, Kolipaka G, Hedley CB, Macdonald CA, Millard P, Murrell JC.  2007.  Effect of afforestation and reforestation of pastures on the activity and population dynamics of methanotrophic bacteria. Applied and Environmental Microbiology. 73(16):5153-5161.
Ortiz-Rubio MA, Orskov ER, Milne J, Galina HMA.  2007.  Effect of different sources of nitrogen on in situ degradability and feed intake of Zebu cattle fed sugarcane tops (Saccharum officinarum). Animal Feed Science and Technology. 139(3-4):143-158.
Rungapamestry V, Duncan AJ, Fuller Z, Ratcliffe B.  2007.  Effect of meal composition and cooking duration on the fate of sulforaphane following consumption of broccoli by healthy human subjects. British Journal of Nutrition.. 97:644-652.
Fraser MD, Davies DA, Wright IA, Vale JE, Nute GR, Hallett KG, Richardson RI.  2007.  Effect on upland beef production of incorporating winter feeding of red clover silage or summer grazing of Molinia-dominated semi-natural pastures. Grass and Forage Science. 62(3):284-300.
Treonis AM, Cook R, Dawson LA, Grayston SJ, Mize T.  2007.  Effects of a plant parasitic nematode (Heterodera trifolii) on clover roots and soil microbial communities. Biology and Fertility of Soils. 43(5):541-548.
Ghorbani J, Le Duc M, McAllister H, Pakeman RJ, Marrs R.  2007.  Effects of experimental restoration on the diaspore bank of an upland moor degraded by Pteridium aqulinum invasion. Land Degradation and Development. 18(6):659-669.
Rhind SM, Kyle CE, Mackie C, Telfer G.  2007.  Effects of exposure of ewes to sewage sludge-treated pasture on phthalate and alkyl phenol concentrations in their milk. The Science of the Total Environment. 383(1-3):70-80.
Fraser MD, Davies DA, Vale JE, Hirst WM, Wright IA.  2007.  Effects on animal performance and sward composition of mixed and sequential grazing of permanent pasture by cattle and sheep. Livestock Production Science. 110(3):251-266.
Millard P, Sommerkorn M, Grelet GA.  2007.  Environmental change and carbon limitation in trees: a biochemical, ecophysiological and ecosystem appraisal. New Phytologist. 175(1):11-28.
Prosser JI, Bohannan BJM, Curtis TP, Ellis RJ, Firestone MK, Freckleton RP, Green JL, Green LE, Killham K, Lennon JJ et al..  2007.  Essay - The role of ecological theory in microbial ecology. Nature Reviews Microbiology. 5(5):384-392.
Tagarelli G, Fiorini S, Piro A, Luiselli D, Tagarelli A, Pettener D.  2007.  Ethnicity and biodemographic structure in the Arbereshe of the province of Cosenza, Souther Italy in the XIX century. Collegium Antropologicum. 31:331-338.
Fiorini S, Tagarelli G, Boattini A, Luiselli D, Piro A, Tagarelli A, Pettener D.  2007.  Ethnicity and evolution of the biodemographic structure of Arbereshe and Italian populations of the Pollino Area, Southern Italy (1820-1984). American Anthropologist. 109(4):735-746.
Kenyon W.  2007.  Evaluating flood risk management options in Scotland: A participant led multi-criteria approach. Ecological Economics. 64(1):70-81.
Blackstock KL, Richards C.  2007.  Evaluating stakeholder involvement in river basin planning: a Scottish case study. Water Policy. 9(5):493-512.
Veiberg V, Mysterud A, Langvatn R, Loe LE, Irvine RJ, Bonenfant C, Couweleers F, Stenseth N.  2007.  Evidence for a trade-off between early growth and tooth wear in Svalbard reindeer. Journal of Animal Ecology. 76(6):1139-1148.
Perez-Barberia FJ, Schultz S, Dunbar RIM.  2007.  Evidence for coevolution of sociality and relative brain size in three orders of mammals. Evolution. 61(12):2811-2821.
Wadham JL, Cooper RJ, Tranter M, Bottrell S.  2007.  Evidence for widespread anoxia in the proglacial zone of an Arctic glacier. Chemical Geology. 243(1-2):1-15.
Davies BB, Hodge ID.  2007.  Exploring environmental perspectives in arable agriculture: a Q methodology study in East Anglia, UK. Ecological Economics. 61(2-3):323-333.
El Zemrany H, Czarnes S, Hallett PD, Alamercery S, Bally R, Monrozier LJ.  2007.  Early changes in root characteristics of maize (Zea mays) following seed inoculation with the PGPR Azospirillum lipoferum CRT1. Plant and Soil. 291:109-118. Abstract
Krogh PH, Griffiths BS.  2007.  ECOGEN - Soil ecological and economic evaluation of genetically modified crops. Pedobiologia. 51:171-173. Abstract
Chope GA, Terry LA, White PJ.  2007.  The effect of 1-methylcyclopropene (1-MCP) on the physical and biochemical characteristics of onion cv. SS1 bulbs during storage. Postharvest Biology and Technology. 44:131-140. Abstract
Anthony J-P, Fyfe L, Stewart D, McDougall GJ, Smith HV.  2007.  The effect of blueberry extracts on Giardia duodenalis viability and spontaneous excystation of Cryptosporidium parvum oocysts, in vitro.. Methods. 42:339-348. Abstract
Andersen HS, Gambling L, Holtrop G, McArdle HJ.  2007.  Effect of dietary copper deficiency on iron metabolism in the pregnant rat. British Journal of Nutrition. 97:239-246. Abstract
Chope GA, Terry LA, White PJ.  2007.  The effect of the transition between controlled atmosphere and regular atmosphere storage on bulbs of onion cultivars SS1, Carlos and Renate. Postharvest Biology and Technology. 44:228-239. Abstract
Lehesranta SJ, Koistinen KM, Massat N, Davies HV, Shepherd LVT, McNicol JW, Cakmak I, Cooper J, Luck L, K SO et al..  2007.  Effects of agricultural production systems and their components on protein profiles of potato tubers. Proteomics. 7:597-604. Abstract
Griffiths DW, Dale MFB, Morris WL, Ramsay G.  2007.  Effects of season and postharvest storage on the carotenoid content of Solanum phureja potato tubers. Journal of Agricultural and Food Chemistry. 55:379-385. Abstract
Ravirala RS, Barabote RD, Wheeler DM, Reverchon S, Tatum O, Malouf J, Liu H, Pritchard L, Hedley PE, Birch PRJ et al..  2007.  Efflux pump gene expression in Erwinia chrysanthemi is induced by exposure to phenolic acids. Molecular Plant-Microbe Interactions. 20:313-320. Abstract
Johnson SN, Zhang X, Crawford JW, Gregory PJ, Young IM.  2007.  Egg hatching and survival time of soil-dwelling insect larvae: a partial differential equation model and experimental validation. Ecological Modelling. 202:493-502. Abstract
Shams-Bakhsh M, Canto T, Palukaitis P.  2007.  Enhanced resistance and neutralization of defense responses by suppressors of RNA silencing. Virus Research. 130:103-109. Abstract
Dziva F, Mahajan A, Cameron P, Currie C, McKendrick IJ, Wallis TS, Smith DGE, Stevens MP.  2007.  EspP, a type V-secreted serine protease of enterohaemorrhagic Escherichia coli O157:H7, influences intestinal colonization of calves and adherence to bovine primary intestinal epithelial cells. FEMS Microbiology Letters. 271:258-264. Abstract
Kvarnstr M, Glasbey CA.  2007.  Estimation of centres and radial intensity profiles of spherical nano-particles in digital microscopy. Biometrical Journal. 49:300-311. Abstract
Cook AR, Otten W, Marion G, Gibson GJ, Gilligan CA.  2007.  Estimation of multiple transmission rates for epidemics in heterogeneous populations. Proceedings of the National Academy of Sciences, USA. 104:20392-20397. Abstract
Cortet J, Griffiths BS, Bohanec M, Demsar D, Andersen MN, Caul S, Birch ANE, Pernin C, Tabone E, de Vaufleury A et al..  2007.  Evaluation of effects of transgenic Bt maize on microarthropods in a European multi-site experiment. Pedobiologia. 51:207-218. Abstract
Takle GW, Toth IK, Brurberg MB.  2007.  Evaluation of reference genes for real-time RT-PCR expresion studies in the plant pathogen Pectobacterium atrosepticum. BMC Plant Biology. 7:-50. Abstract
Watanabe T, Broadley MR, Jansen S, White PJ, Takada J, Satake K, Takamatsu T, Tuah SJ, Osaki M.  2007.  Evolutionary control of leaf element composition in plants. New Phytologist. 174:516-523. Abstract
Zazzo A, Harrison SM, Bahar B, Moloney AP, Monahan FJ, Scrimgeour CM, Schmidt O.  2007.  Experimental determination of dietary carbon turnover in bovine hair and hoof. Canadian Journal of Zoology. 85:1239-1248. Abstract
Usher KM, Bergman B, Raven JA.  2007.  Exploring cyanobacterial mutualisms. Annual Review of Ecology Evolution and Systematics. 38:255-273. Abstract
Grant OM, Tronina L, Jones HG, Chaves MM.  2007.  Exploring thermal imaging variables for the detection of stress responses in grapevine under different irrigation regimes. Journal of Experimental Botany. 58:815-825. Abstract
de Vaufleury A, Kramarz P, Binet P, Cortet J, Caul S, Andersen MN, Plumey E, Coeurdassier M, Krogh PH.  2007.  Exposure and effects assessments of Bt maize on non-target organisms (gastropod, microarthropods, mycorrhizal fungi) in a semi-field microcosm experiment. Pedobiologia. 51:185-194. Abstract
Kikuchi T, Aikawa T, Kosaka H, Pritchard L, Ogura N, Jones JT.  2007.  Expressed sequence tag (EST) analysis of the pine wood nematode Bursaphelenchus xylophilus and B. mucronatus. Molecular and Biochemical Parasitology. 155:9-17. Abstract
White PJ, Bowen HC, Marshall B, Broadley MR.  2007.  Extraordinarily high leaf selenium to sulfur ratios define "Se-accumulator" plants. Annals of Botany. 100:111-118. Abstract
Butler A, Heffernan JE, Tawn JA, Flather RA, Horsburgh KJ.  2007.  Extreme value analysis of decadal variations in storm surge elevations. Journal of Marine Systems. 67:189-200. Abstract
2008
Moran D, Dunn SM.  2008.  The economic value of water use: implications for implementing the Water Framework Directive in Scotland. Journal of Environmental Management. 87(3):484-496.
Gelan A, Schwarz G.  2008.  The effect of single farm payments on less favoured areas agriculture in Scotland: a CGE analysis. Agricultural and Food Science. 17(1):3-17.
Tingem M, Rivington M, Bellocchi G, Azam-Ali S, Colls J.  2008.  Effects of climate change on Cameroon crop production: Simulation results using GCM scenarios. Climate Research. 36:65-77.
Dennis P, Skartveit J, McCracken DI, Pakeman RJ, Beaton K, Kunaver A, Evans D.  2008.  The effects of livestock grazing on foliar arthropods associated with bird diet in upland grasslands of Scotland. Journal of Applied Ecology. 45:279-287.
Pisani LF, Pocar P, Antonini S, Brevini TAL, Rhind SM, Gandolfi F.  2008.  Effects of pre-mating nutrition on mRNA levels of developmentally relevant genes in sheep oocytes and granulosa cells. Reproduction. 136:303-312.
Sibbald AM, Oom SP, Hooper RJ, Anderson R.  2008.  Effects of social behaviour on the spatial distribution of sheep grazing a complex vegetation mosaic. Applied Animal Behaviour Science. 115(3-4):149-159.
Metcalfe DB, Meir P, Aragao LEOC, da Costa ACL, Braga A, Goncalves PHL, de Athaydes J, Dawson LA, Malhi Y, Williams M.  2008.  The effects of water availability on root growth and morphology in an Amazon forest. Root responses to soil moisture variation at an eastern Amazon rainforest site. Plant and Soil. 311(1-2):189-199.
Rhind SM.  2008.  Endocrine disruptors and other food-contaminating environmental pollutants as risk factors in animal reproduction. Proceedings of International Congress on Animal Reproduction. Reproduction in Domestic Animals. 43(Suppl. 2):15-22.
Winward G, Avery LM, Stephenson T, Jefferson B.  2008.  Essential oils for the disinfection of grey water. Water Research. 42(8-9):2260-2268.
Acevedo P, Ruiz-Fons F, Vicente J, Reyes-Garcia AR, Alzaga V, Gortazar C.  2008.  Estimating red deer abundance in a wide range of management situations in Mediterranean habitats. Journal of Zoology. 276(1):37-47.
Rivington M, Miller DG, Matthews KB, Russell G, Buchan K.  2008.  Evaluating Regional Climate Model estimates against site-specific observed data in the UK. Climatic Change. 88(2):157-185.
Burton RJF, Kuczera C, Scwarz G.  2008.  Exploring farmers' cultural resistence to voluntary agri-environmental schemes. Sociologia Ruralis. 48(1):16-37.
Pollard SJT, Hickman G, Irving P, Hough RL, Gauntlett DM, Howson S, Hart A, Gayford P, Gent N.  2008.  Exposure assessment of carcass disposal options in the event of a notifiable exotic animal disease: application to avian influenza virus. Environmental Science and Technology. 42(9):3145.
Sneddon AA, Tsofliou F, Fyfe CL, Matheson I, Jackson DM, Horgan GW, Winzell MS, Wahle KWJ, Ahren B, Williams LM.  2008.  Effect of a conjugated linoleic acid and omega-3 fatty acid mixture on body composition and adiponectin. Obesity. 16:1019-1024. Abstract
Zazzo A, Moloney AP, Monahan FJ, Scrimgeour CM, Schmidt O.  2008.  Effect of age and food intake on dietary carbon turnover recorded in sheep wool. Rapid Communications in Mass Spectrometry. 22:2937-2945. Abstract
Davidson RS, Marion G, Hutchings MR.  2008.  Effects of host social hierarchy on disease persistence. Journal of Theoretical Biology. 253:424-433. Abstract
Hinojosa MB, Carreira JA, Rodr JM, Garc R.  2008.  Effects of pyrite sludge pollution on soil enzyme activities: Ecological dose-response model. Science of the Total Environment. 396:89-99. Abstract
Kindred DR, Verhoeven TMO, Weightman RM, Swanston JS, Agu RC, Brosnan JM, Sylvester-Bradley R.  2008.  Effects of variety and fertiliser nitrogen on alcohol yield, grain yield, starch and protein content, and protein composition of winter wheat. Journal of Cereal Science. 48:46-57. Abstract
Hensel G, Valkov V, Middlefell-Williams J, Kumlehn J.  2008.  Efficient generation of transgenic barley: The way forward to modulate plant-microbe interactions. Journal of Plant Physiology. 165:71-82. Abstract
Hopkins DW, Sparrow AD, Shillam LL, English LC, Dennis PG, Novis P, Elberling B, Gregorich EG, Greenfield LG.  2008.  Enzymatic activities and microbial communities in an Antarctic dry valley soil: Responses to C and N supplementation. Soil Biology & Biochemistry. 40:2130-2136. Abstract
Gunn GJ, Hall M, Hunter EA, Low JC.  2008.  Evaluation of a survey approach to estimating the prevalence of cattle carrying antimicrobial-resistant Escherichia coli. Veterinary Journal. 175:416-418. Abstract
Cousens C, Graham M, Sales J, Dagleish MP.  2008.  Evaluation of the efficacy of clinical diagnosis of ovine pulmonary adenocarcinoma. Veterinary Record. 162:88-90. Abstract
Broadley MR, White PJ, Hammond JP, Graham NS, Bowen HC, Emmerson ZF, Fray RG, Iannetta PPM, McNicol JW, May ST.  2008.  Evidence of neutral transcriptome evolution in plants. New Phytologist. 180:587-593. Abstract
Raven JA, Cockell CS, de La Rocha CL.  2008.  The evolution of inorganic carbon concentrating mechanisms in photosynthesis. Philosophical Transactions of the Royal Society of London B - Biological Sciences. 363:2641-2650. Abstract
Druka A, Potokina E, Luo ZW, Bonar N, Druka I, Zhang L, Marshall DF, Steffenson BJ, Close TJ, Wise RP et al..  2008.  Exploiting regulatory variation to identify genes underlying quantitative resistance to the wheat stem rust pathogen Puccinia graminis f. sp. tritici in barley. Theoretical and Applied Genetics. 117:261-272. Abstract
Roberts AMI.  2008.  Exploring relationships between phenological and weather data using smoothing. International Journal of Biometeorology. 52:463-470. Abstract
Chatterjee A, Horgan GW, Theobald CM.  2008.  Exposure assessment for pesticide intake from multiple food products: a Bayesian latent-variable approach. Risk Analysis. 28:1727-1736. Abstract
Ducreux LJM, Morris WL, Prosser IM, Morris JA, Beale MH, Wright F, Shepherd T, Bryan GJ, Hedley PE, Taylor MA.  2008.  Expression profiling of potato germplasm differentiated in quality traits leads to the identification of candidate flavour and texture genes. Journal of Experimental Botany. 59:4219-4231. Abstract
Clayton SJ, Read DB, Murray PJ, Gregory PJ.  2008.  Exudation of alcohol and aldehyde sugars from roots of defoliated Lolium perenne L. grown under sterile conditions. Journal of Chemical Ecology. 34:1411-1421. Abstract
2009
Edwards P, Farrington J, Mellish C, Philip L, Chorley AH, Hielkema F, Pignotti E, Reid R, Polhill JG, Gotts NM.  2009.  e-Social science and evidence-based policy assessment: challenges and solutions. Social Science Computer Review. 27(4):553-568.
Babulo B, Muys B, Nega F, Tollens E, Nyssen J, Deckers J, Mathijs E.  2009.  The economic contribution of forest resource use to rural livelihoods in Tigray, Northern Ethiopia. Forest Policy and Economics. 11(2):123-131.
Waylen KA, McGowan PJK, Milner G, Pawi Study G.  2009.  Ecotourism positively affects awareness and attitudes but not conservation behaviors: a case study at Grande Riviere, Trinidad. Oryx. 43(3):343-351.
Jordan MO, Wendler R, Millard P.  2009.  The effect of autumn N supply on the architecture of young peach (Prunus persica L.) trees. Trees. 23(2):235-245.
Karpouzas DG, Rousidou C, Papadopoulou KK, Bekris F, Zervakis G, Singh BK, Ehaliotis C.  2009.  Effect of continuous olive mill wastewater applications, in the presence and absence of N fertilization, on the structure of the soil fungal communiies. FEMS Microbiology Ecology. 70(3):388-401.
Mossop KF, Davidson CM, Ure AM, Shand CA, Hillier SJ.  2009.  Effect of EDTA on the fractionation and uptake by Taraxacum officinale of potentially toxic elements in soil from former chemical manufacturing sites. Plant and Soil. 320(1-2):117-129.
Wu G, Liu Z, Du G, Thirgood SJ.  2009.  Effect of fencing and grazing on Kobresia-dominated meadow in the Qinghai-Tibetan Plateau, China. Plant and Soil. 319(1-2):115-126.
Watts EJ, Palmer SCF, Bowman AS, Irvine RJ, Smith A, Travis JMJ.  2009.  The effect of host movement on viral transmission dynamics in a vector-borne disease system. Parasitology. 136(10):1221-1234.
Ramirez-Farias C, Slezak K, Fuller Z, Duncan A, Holtrop G, Louis P.  2009.  Effect of inulin on the human gut microbiota: stimulation of Bifidobacterium adolescentis and Faecalibacterium prausnitzii. British Journal of Nutrition. 101(4):541-550.
Egli M, Sartori G, Mirabella A, Favilli F, Giaccai D, Delbos E.  2009.  Effect of north and south exposure on organic matter in high Alpine soils. Geoderma. 149(1-2):124-136.
Mitchell RJ, Rose RJ, Palmer SCF.  2009.  The effect of restoration techniques on non-target species: case studies in moorland systems. Applied Vegetation Science. 12(1):81-91.
Sanz-Perez V, Castro-Diez P, Millard P.  2009.  Effects of drought and shade on nitrogen cycling in the leavers and canopy of mediterranean Qurecus seedlings. Plant and Soil. 316:45-56.
Michelena P, Sibbald AM, Erhard HW, McLeod JE.  2009.  Effects of group size and personality on social foraging: the distribution of sheep across patches. Behavioural Ecology. 20(1):145-152.
Bergfur J, Johnson RK, Sandin L, Goedkoop W.  2009.  Effects of nutrient enrichment on C and N stable isotope ratios of invertebrates, fish and their food resources in boreal streams. Hydrobiologia. 628(1):67-79.
DeGabriel JL, Moore BD, Foley WJ, Johnson CN.  2009.  The effects of plant defensive chemistry on nutrient availability determine reproductive success in a mammal. Ecology. 90(3):711-719.
Bakam I, Matthews RB.  2009.  Emission trading in agriculture: a study of design options using an agent-based approach. Mitigation and Adaptation Strategies for Global Change.. 14(8):755-776.
Baker KL, Langenheder S, Nicol GW, Ricketts D, Killham K, Campbell CD, Prosser JI.  2009.  Environmental and spatial characterisation of bacterial community composition in soil to inform sampling strategies. Soil Biology and Biochemistry. 41(11):2292-2298.
Beale CM, Lennon JJ, Gimona A.  2009.  European bird distributions still show few climate associations. Proceedings of the National Academy of Sciences, USA. 106(16):E41-E43.
Omsjoe EH, Stien A, Irvine RJ, Albon SD, Dahl E, Thoresen SI, Rustad E, Ropstad E.  2009.  Evaluating capture stress and its effects on reproductive success in Svalbard reindeer. Canadian Journal of Zoology. 87(1):73-85.
Stott AW, Vousough-Ahmadi B, Morgan-Davies C, Dwyer C, Goddard PJ, Phillips K, Milne CE, Kupiec B, Ringrose S, Waterhouse A.  2009.  Evaluating extensive sheep farming systems. Aspects of Applied Biology, 93, 161-166. Proceedings of the Integrated Agricultural Systems: Methodologies, Modelling and Measurement Conference, Edinburgh, UK, 2-4, June 2009.. 93:161-166.
Bellingham M, Fowler PA, Amezaga MR, Rhind SM, Cotinot C, Mandon-Pepin B, Sharpe RM, Evans NP.  2009.  Exposure to a complex cocktail of environmental endocrine disrupting compounds disturbs the KiSS-1/GPR54 system in ovine hypothalamus and pituitary gland. Environmental Health Perspectives. 117(10):1556-1562.
Lind PM, Gustacsson M, Hermsen S, Kyle CE, Orberg J, Rhind SM.  2009.  Exposure to pastures fertilised with sewage sludge disrupts bone tissue homeostasis in sheep. The Science of the Total Environment. 407(7):2200-2208.
Barr P, McKenzie BM, Hallett PD.  2009.  Earthworms bring compacted and loose soils to a similar mechanical state. Soil Biology & Biochemistry. 41:656-658. Abstract
Yang D, Zhang T, Zhang K, Greenwood DJ, Hammond JP, White PJ.  2009.  An easily implemented agro-hydrological procedure with dynamic root simulation for water transfer in the crop-soil system: Validation and application. Journal of Hydrology. 370:177-190. Abstract
Wookey PA, Aerts R, Bardgett RD, Baptist F, Brathan KA, Cornelissen JHC, Gough L, Hartley IP, Hopkins DW, Lavorerl S et al..  2009.  Ecosystem feedbacks and cascade processes: understanding their role in the responses of Arctic and alpine ecosystems to environmental change. Global Change Biology. 15:1153-1172. Abstract
Wypijewski K, Hornyik C, Shaw JA, Stephens J, Goraczniak R, Gunderson SI, Lacomme C.  2009.  Ectopic 5' splice sites inhibit gene expression by engaging RNA surveillance and silencing pathways in plants. Plant Physiology. 151:955-965.
Pawlett M, Hopkins DW, Moffett BF, Harris JA.  2009.  The effect of earthworms and liming on soil microbial communities. Biology and Fertility of Soils. 45:361-369. Abstract
Ramirez-Farias C, Slezak K, Fuller Z, Duncan A, Holtrop G, Louis P.  2009.  Effect of inulin on the human gut microbiota: stimulation of Bifidobacterium adolescentis and Faecalibacterium prausnitzii. British Journal of Nutrition. 101:541-550.
Gregory AS, Watts CW, Griffiths BS, Hallett PD, Kuan HL, Whitmore AP.  2009.  The effect of long-term soil management on the physical and biological resilience of a range of arable and grassland soils in England. Geoderma. 153:172-185.
Wemelsfelder F, Nevison IM, Lawrence AB.  2009.  The effect of perceived environmental background on qualitative assessments of pig behaviour. Animal Behaviour. 78:477-484.
Wojciechowski T, Gooding MJ, Ramsay L, Gregory PJ.  2009.  The effects of dwarfing genes on seedling root growth of wheat. Journal of Experimental Botany. 60:2565-2573.
Brown KL, Wathne GJ, Sales J, Bruce ME, Mabbott NA.  2009.  The effects of host age on follicular dendritic cell status dramatically impair scrapie agent neuroinvasion in aged mice. Journal of Immunology. 183:5199-5207.
Newton AC, Guy DC.  2009.  The effects of uneven patchy cultivar mixtures on disease control and yield in winter barley. Field Crops Research. 110:225-228. Abstract
Glasbey CA, Khondoker MR.  2009.  Efficiency of functional regression estimators for combining multiple laser scans of cDNA microarrays. Biometrical Journal. 51:45-55.
Waugh R, Jannink JL, Muehlbauer GJ, Ramsay L.  2009.  The emergence of whole genome association scans in barley. Current Opinion in Plant Biology. 12:218-222.
Kassim A, Poette J, Paterson A, Zait D, McCallum S, Woodhead M, Smith K, Hackett CA, Graham J.  2009.  Environmental and seasonal influences on red raspberry anthocyanin antioxidant contents and identification of quantitative traits loci (QTL). Molecular Nutrition and Food Research. 53:625-634. Abstract
Le Gall O, Sanfacon H, Ikegami M, Iwanami T, Jones AT, Karasev A, Lehto K, Wellink J, Wetzel T, Yoshikawa N.  2009.  Erratum: Cheravirus and Sadwavirus: two unassigned genera of plant positive-sense single-stranded RNA viruses formerly considered atypical members of the genus Nepovirus (family Comoviridae). Archives of Virology. 154:1019-1019.
Cornulier T, Elston DA, Arcese P, Benton TG, Douglas DJT, Lambin X, Reid J, Robinson RA, Sutherland WJ.  2009.  Estimating the annual number of breeding attempts from breeding dates using mixture models. Ecology Letters. 12:1184-1193.
Ashman MR, Hallett PD, Brookes PC, Allen J.  2009.  Evaluating soil stabilisation by biological processes using step-wise aggregate fractionation. Soil and Tillage Research. 102:209-215.
Thiel T, Graner A, Waugh R, Grosse I, Close TJ, Stein N.  2009.  Evidence and evolutionary analysis of ancient whole-genome duplication in barley predating the divergence from rice. BMC Evolutionary Biology. 9:-209.
Lokossou AA, Park TH, van Arkel G, Arens M, Ruyter-Spira C, Morales J, Whisson SC, Birch PRJ, Visser RGF, Jacobsen E et al..  2009.  Exploiting knowledge of R/Avr genes to rapidly clone a new LZ-NBS-LRR family of late blight resistance genes from potato linkage group IV. Molecular Plant-Microbe Interactions. 22:630-641.
George TS, Richardson AE, Li SM, Gregory PJ, Daniell TJ.  2009.  Extracellular release of a heterologous phytase from roots of transgenic plants: does manipulation of rhizosphere biochemistry impact microbial community structure? FEMS Microbiology Ecology. 70:433-445. Abstract
2010
Mitchell RJ, Campbell CD, Chapman SJ, Cameron CM.  2010.  The ecological engineering impact of a single tree species on the soil microbial community. Journal of Ecology. 98(1):50-61.
Waylen KA, Fischer A, McGowan PJK, Thirgood SJ, Milner-Gulland EJ.  2010.  The effect of local cultural context on the success of community-based conservation interventions. Conservation Biology. Published online. 24(4):1119-1129.
DeGabriel JL, Moore BD, Marsh KJ, Foley WJ.  2010.  The effect of plant secondary metabolites on the interplay between the internal and external environments of marsupial folivores. Chemoecology. 20(2):97-108.
Rhind SM, Evans NP, Bellingham M, Sharpe RM, Cotinot C, Mandon-Pepin B, Loup B, Sinclair KD, Lea RG, Pocar P et al..  2010.  Effects of environmental pollutants on the reproduction and welfare of ruminants. Animal. 4(7):1227-1239.
Gao-Lin W, Mei-Ru W, Ting G, Tian-Ming H, Davidson G.  2010.  Effects of mowing utilization on forage yield and quality in five oat varieties in alpine area of the eastern Qinghai-Tibetan Plateau. African Journal of Biotechnology. 9(4):461-466.
Nielsen UN, Osler GHR, Campbell CD, Neilson R, Burslem DFRP, van der Wal R.  2010.  The enigma of soil animal species diversity revisited: the role of small-scale heterogeneity. PLoS ONE. 5(7):e11567.
Sutherland LA.  2010.  Environmental grants and regulations in strategic farm business decision-making: A case study of attitudinal behaviour in Scotland. Land Use Policy, Special Issue: SI. 27(2):415-423.
Silvertown J, Tallowin J, Stevens C, Power SA, Morgan V, Emmett B, Hester AJ, Grime P, Morecroft M, Buxton R et al..  2010.  Environmental myopia: a diagnosis and a remedy. Trends in Ecology and Evolution. 25(10):556-561.
Smith J, Gottschalk P, Bellarby J, Chapman SJ, Lilly A, Towers W, Bell J, Coleman K, Nayak D, Richards M et al..  2010.  Estimating changes in Scottish soil carbon stocks using ECOSSE. I. Model description and uncertainties. Climate Research. 45:179-192.
Smith J, Gottschalk P, Bellarby J, Chapman SJ, Lilly A, Towers W, Bell J, Coleman K, Nayak D, Richards M et al..  2010.  Estimating changes in Scottish soil carbon stocks using ECOSSE. II. Application. Climate Research. 45:179-192.
Speed JDM, Austrheim G, Hester AJ, Mysterud, A.  2010.  Experimental evidence for herbivore limitation of the treeline. Ecology. 91(11):3414-3420.
Singh BK.  2010.  Exploring microbial diversity for biotechnology: the way forward. Trends in Biotechnology. 28(3):111-116.
Broadley MR, White PJ.  2010.  Eats roots and leaves. Can edible horticultural crops address dietary calcium, magnesium and potassium deficiencies? Proceedings of the Nutrition Society. 69:601-612.
McDougall GJ, Dobson P, Jordan-Mahy N.  2010.  Effect of different cooking regimes on rhubarb polyphenols. Food Chemistry. 119:758-764.
Tighe P, Duthie GG, Vaughan N, Brittenden J, Simpson WG, Duthie S, Mutch W, Wahle K, Horgan GW, Thies F.  2010.  Effect of increased consumption of whole-grain foods on blood pressure and other cardiovascular risk markers in healthy middle-aged persons: a randomised controlled trial. American Journal of Clinical Nutrition. 94:733-740.
Ouellet DR, Berthiaume R, Holtrop G, Lobley GE, Martineau R, Lapierre H.  2010.  Effect of method of conservation of timothy on endogenous nitrogen flows in lactating dairy cows. Journal of Dairy Science. 93:4252-4261.
Vysotskaya LB, Hedley PE, Sharipova G, Veselov D, Kudoyarova G, Morris JA, Jones HG.  2010.  Effect of salinity on water relations of wild barley plants differing in salt tolerance. AoB Plants. :-plq006.
Moragues M, Comadran J, Waugh R, Milne I, Flavell AJ, Russell JR.  2010.  Effects of ascertainment bias and marker number on estimations of barley diversity from high-throughput SNP genotype data. Theoretical and Applied Genetics. 120:1525-1534.
Smith LA, Wells KL, Marion G, Swain DL, Hutchings MR.  2010.  Effects of group composition on the grazing behaviour of herbivores. Animal Behaviour. 80:527-534.
Johnson SN, Gregory PJ, McNicol JW, Oodally Y, Zhang XX, Murray PJ.  2010.  Effects of soil conditions and drought on egg hatching and larval survival of the clover root weevil (Sitona lepidus). Applied Soil Ecology. 44:75-79.
Broadley MR, Hammond JP, White PJ, Salt DE.  2010.  An efficient procedure for normalising ionomics data for Arabidopsis thaliana. New Phytologist. 186:270-274.
Johnson SN, McNicol JW.  2010.  Elevated CO2 and aboveground-belowground herbivory by the clover root weevil. Oecologia. 162:209-216.
Nielson UN, Osler GHR, Campbell CD, Neilson R, Burslem DFRP, van der Wal R.  2010.  The enigma of soil animal species diversity revisited: the role of small-scale heterogeneity. PLoS One. 5:-e11567.
Chen XW, Hackett CA, Niks RE, Hedley PE, Booth C, Druka A, Marcel TC, Vels A, Bayer M, Milne I et al..  2010.  An eQTL analysis of partial resistance to Puccinia hordei in barley. PLoS One. 5:-e8598.
Roberts TJ, McKenna SJ, Du CJ, Wuyts N, Valentine TA, Bengough AG.  2010.  Estimating the motion of plant root cells from in vivo confocal laser scanning microscopy images. Machine Vision and Applications. 21:921-939.
Casa R, Baret F, Buis S, Lopez-Lozano R, Pascucci S, Palombo A, Jones HG.  2010.  Estimation of maize canopy properties from remote sensing by inversion of 1-D and 4-D models. Precision Agriculture. 11:319-334.
Fyfe CL, Stewart J, Murison SD, Jackson DM, Rance K, Speakman JR, Horgan GW, Johnstone AM.  2010.  Evaluating energy intake measurement in free-living subjects: when to record and for how long? Public Health Nutrition. 13:172-180.
Cock PJA, Whitworth DE.  2010.  Evolution of relative reading frame bias in unidirectional prokaryotic gene overlaps. Molecular Biology and Evolution. 27:753-756.
Raven JA, Andrews M.  2010.  Evolution of tree nutrition. Tree Physiology. 30:1050-1071.
Tattersall RJ, Prashar A, Singh KD, Tokarczuk PF, Erichsen JT, Hocking PM, Guggenheim JA.  2010.  Ex vivo magnetic resonance imaging of crystalline lens dimensions in chicken. Molecular Vision. 16:144-153.
Druka A, Franckowiak JD, Lundqvist U, Bonar N, Alexander J, Guzy-Wrobelska J, Ramsay L, Druka I, Grant I, Macaulay M et al..  2010.  Exploiting induced variation to dissect quantitative traits in barley. Biochemical Society Transactions. 38:683-688.
Druka A, Potokina E, Luo ZW, Jiang N, Chen XW, Kearsey MJ, Waugh R.  2010.  Expression quantitative trait loci analysis in plants. Plant Biotechnology Journal. 8:10-27.
2011
Byrne SL, Foito A, Hedley PE, Morris J, Stewart D, Barth S.  2011.  Early response mechanisms of perennial ryegrass (Lolium perenne) to phosphorous deficiency. Annals of Botany. 107:243-254.
Garcia-Palacios P, Bowker MA, Chapman SJ, Maestre FT, Soliveres S, Gallardo A, Valladares F, Guerrero C, Castillo-Monroy AP, Escudero A.  2011.  Early-successional vegetation changes after roadside prairie restoration modify soil functioning by changing microbial functional diversity. Soil Biology and Biochemistry. 43:1245-1253.
Nadeau PH.  2011.  Earth's energy "Golden Zone": a synthesis from mineralogical research. Clay Minerals. 46:1-24.
McAllister RRJ, G. TJ, Reeson AF, Gordon IJ.  2011.  Economic behavior in the face of resource variability and uncertainty. Ecology and Society. 16:6.
Tingem Munang R, Thiaw I, Rivington M.  2011.  Ecosystem management: tomorrow's approach to enhancing food security under a changing climate. Sustainability. 3:937-954.

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The James Hutton Research Institute is the result of the merger in April 2011 of MLURI and SCRI. This merger formed a new powerhouse for research into food, land use, and climate change.