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Found 5892 results

2011
Caron-Lormier G, Bohan DA, Dye R, Hawes C, Humphry RW, Raybould A.  2011.  Modelling an ecosystem: the example of agro-ecosystems. Ecological Modelling. 222:1163-1173.
Grzegorczyk M, Husmeier D, Rahnenfuhrer J.  2011.  Modelling non-stationary dynamic gene regulatory processes with the BGM model. Computational Statistics. 26:199-218.
Bohan DA, Powers SJ, Champion G, Haughton AJ, Hawes C, Squire GR, Cussans J, Mertens SK.  2011.  Modelling rotations: can crop sequences explain arable weed seedbank abundance? Weed Research. 51:422-432.
Kuster EC, Bierman SM, Klotz S, Kuhn I.  2011.  Modelling the impact of climate and land use change on the geographical distribution of leaf anatomy in a temperate flora. Ecography. 34:507-518.
Duarte IM, Almeida MTM, Duarte MM, Brown DJF, Neilson R.  2011.  Molecular diagnosis of trichodorid species from Portugal. Plant Pathology. 60:586-594.
Scibetta S, Schena L, Chimento A, Cacciola SO, Cooke DEL.  2011.  A molecular method to assess Phytophthora diversity in environmental samples. Journal of Microbiological Methods. 88:356-368.
Oliveira CMG, Inomoto MM, Bessi R, Tomazini MDO, Blok VC.  2011.  Molecular techniques and classical taxonomy on plant-parasitic nematodes diagnosis. Annual Review of Plant Pathology. 19:309-336.
Oliveira CMG, Monteiro AR, Blok VC.  2011.  Morphological and molecular diagnostics for plant-parastic nematodes: working together to get the identification done. Tropical Plant Pathology. 36:65-73.
van Doorn WG, Beers EP, Dangl JL, Franklin-Tong VE, Gallois P, Hara-Nishimura I, Jones AM, Kawai-Yamada M, Lam E, Mundy J et al..  2011.  Morphological clasification of plant cell deaths. Cell Death and Differentiation. 18:1241-1246.
Perez-Mendoza D, Coulthurst SJ, Humphris S, Campbell E, Welch M, Toth IK, Salmond GPC.  2011.  A multi-repeat adhesin of the phytopathogen, Pectobacterium atrosepticum, is secreted by a Type 1 pathway and is subject to complex regulation involving a non-canonical diguanylate cyclase. Molecular Microbiology. 82:719-733.
Bennett AE, Thomsen M, Strauss SY.  2011.  Multiple mechanisms enable invasive species to suppress native species. Amercian Journal of Botany. 98:1086-1094.
Pakeman RJ.  2011.  Multivariate identification of plant functional response and effect traits in an agricultural landscape. Ecology. 92:1353-1365.
Hugron S, Andersen R, Poulin M, Rochefort L.  2011.  Natural plant colonization of borrow pits in boreal forest highlands of eastern Canada. Botany. 89:451-465.
Andrews M, James EK, Sprent JI, Boddey RM, Gross E, Dos Reis Junior FB.  2011.  Nitrogen fixation in legumes and actinorhizal plants in natural ecosystems: values obtained using N-15 natural abundance. Plant Ecology and Diversity. 4:131-140.
Grzegorczyk M, Husmeier D.  2011.  Non-homogeneous dynamic Bayesian networks for continuous data. Machine Learning. 83:355-419.
Xiao H, Hourihan JM, Brown LJ, McMahon M, Stewart D, Hayes JD.  2011.  Nrf2-mediated induction of antioxidant response element-driven gene expression by flavonoids is dependent on their chemical structure. Toxicology. 290:126-127.
de Carcer DA, Cuiv O, Wang T, Kang S, Worthley D, Whitehall V, Gordon IJ, McSweeney C, Leggett B, Morrison M.  2011.  Numerical ecology validates a biogeographical distribution and gender-based effect on mucosa-associated bacteria along the human colon. ISME Journal. 5:801-809.
Qian B, Gregorich EG, Gameda S, Hopkins DW, Wang XL.  2011.  Observed soil temperature trends associated with climate change in Canada. Journal of Geophysical Research. 116:16pp.
Fischer A, Glenk K.  2011.  One model fits all? - On the moderating role of emotional engagement and confusion in the elicitation of preferences for climate change adaptation policies Ecological Economics. 70:1178-1188.
Nijnik M, Slee B, Pajot G.  2011.  Opportunities and challenges for terrestrial carbon offsetting and marketing, with some implications for forestry in the UK. South and East European Journal of Forestry (SEEFOR). 1:69-79.
Zhang Z, Rhind SM.  2011.  Optimized determination of polybrominated diphenyl ethers and polychlorinated biphenyls in sheep serum by solid-phase extraction-gas chromatography mass spectrometry. Talanta. 84:487-493.
Buchanan HAS, Kerr WJ, Meier-Augenstein W, NicDaeid NN.  2011.  Organic impurities, stable isotopes, or both: a comparison of instrumental and pattern recognition techniques for the profiling of 3,4-methylenedioxymethamphetamine. Analytical Methods. 3:2279-2288.
Torres GA, Gong Z, Iovene M, Hirsch C, Buell CR, Bryan GJ, Novak P, Macas J, Jiang J.  2011.  Organization and evolution of subtelomeric satellite repeats in the potato genome. Genes Genomes Genetics. 1:85-92.
Yan X, De Clercq P, Han R, Jones JT, Chen S, Moens M.  2011.  Osmotic responses of different strains of Steinernema carpocapsae. Nematology. 13:845-851.
Toorop PE, Herrera Ballester M, Deng W, Iannetta PPM.  2011.  Osmotic stress tolerance of Capsella bursa-pastoris seeds contributes to bet-hedging in arable fields. Association of Applied Biologists - Agricultural Ecology Research: It's Role in Delivering Sustainable Farm Systems, Dundee, 15-16 June 2011. Aspects of Applied Biology. 109:39-40.
McGavin WJ, Cock PJA, MacFarlane SA.  2011.  Partial sequence and RT-PCR diagnostic test for the plant rhabdovirus Raspberry vein chlorosis virus. Plant Pathology. 60:462-467.
Hoolahan A, Blok VC, Gibson T, Dowton M.  2011.  Paternal leakage of Mitochondrial DNA in experimental crosses of populations of the potato cyst nematode Globodera pallida. Genetica. 139:1509-1519.
Comadran J, Ramsay L, MacKenzie K, Hayes P, Close TJ, Muehlbauer G, Stein N, Waugh R.  2011.  Patterns of polymorphism and linkage disequilibrium in cultivated barley. Theoretical and Applied Genetics. 122:523-531.
Ross HA, Morris WL, Ducreux LJM, Hancock RD, Verrall SR, Morris JA, Tucker GA, Stewart D, Hedley PE, McDougall GJ et al..  2011.  Pectin engineering to modify product quality in potato. Plant Biotechnology Journal. 9:848-856.
Spezia L, Futter MN, Brewer MJ.  2011.  Periodic multivariate normal hidden Markov models for the analysis of water quality time series. Environmetrics. 22:304-317.
Smkal P, Kenicer G, Flavell AJ, Corander J, Kosterin O, Redden RJ, Ford R, Coyne CJ, Maxted M, Ambrose MJ et al..  2011.  Phylogeny, phylogeography and genetic diversity of the Pisum genus. Plant Genetic Resources. 9:4-18.
Peng X, Hallett PD, Zhang B, Horn R.  2011.  Physical response of rigid and non-rigid soils to analogues of biological exudates. European Journal of Soil Science. 62:676-684.
White PJ, Broadley MR.  2011.  Physiological limits to zinc biofortification of edible crops. Frontiers in Plant Science. 2:article80.
Bjorkman M, Klingen I, Birch ANE, Bones AM, Bruce T, Johansen T, Meadow R, Molmann J, Selijasen R, Smart L et al..  2011.  Phytochemicals of Brassicaceae in plant protection and human health - influences of climate, environment and agronomic practice. Phytochemistry. 72:538-556.
Vartapetian AB, Tuzhikov AI, Chichkova NV, Taliansky ME, Wolpert TJ.  2011.  A plant alternative to animal caspases: subtilisin-like proteases. Cell Death and Differentiation. 18:1289-1297.
Skiba MW, George TS, Baggs EM, Daniell TJ.  2011.  Plant influence on nitrification. Biochemical Society Transactions. 39:275-278.
Johnson SN, Staley JT, McLeod FAL, Hartley SE.  2011.  Plant-mediated effects of soil invertebrates and summer drought on above-ground multitrophic interactions. Journal of Ecology. 99:57-65.
Tilsner J, Amari K, Torrance L.  2011.  Plasmodesmata viewed as specialised membrane adhesion sites. Protoplasma. 248:39-60.
Veronico P, Melillo MT, Saponaro C, Leonetti P, Picardi E, Jones JT.  2011.  A polygalacturonase-inhibiting protein with a role in pea defence against the cyst nematode Heterodera goettingianna. Molecular Plant Pathology. 12:275-287.
Mattila PH, Hellstrom J, McDougall GJ, Dobson G, Pihlava JM, Tiirikka.T, Stewart D, Karjalainen RO.  2011.  Polyphenol and vitamin C content in European commercial blackcurrant juice products. Food Chemistry. 127:1216-1223.
Moloney PD, Hearne JW, Gordon IJ, McLeod S.  2011.  Portfolio optimisation techniques for a mixed-grazing scenario for Australia's rangelands. Natural Resource Modeling. 24:102-116.
Andrews M, Edwards GR, Ridgway HJ, Cameron KC, Di HJ, Raven JA.  2011.  Positive plant microbial interactions in perennial ryegrass dairy pasture systems. Annals of Applied Biology. 159:79-92.
Ross HA, Wright KM, McDougall GJ, Roberts AG, Chapman SN, Morris WL, Hancock RD, Stewart D, Tucker GA, James EK et al..  2011.  Potato tuber pectin structure is influenced by pectin methyl esterase activity and impacts on cooked potato texture. Journal of Experimental Botany. 62:371-381.
Elston DA, Nevison IM, Scott WA, Sier ARJ, Morecroft MD.  2011.  Power calculations for monitoring studies: a case study with alternative models for random variation. Environmetrics. 22:618-625.
Fox NJ, White PCL, McClean CJ, Marion G, Evans A, Hutchings MR.  2011.  Predicting impacts of climate change on Fasciola hepatica risk. PLoS ONE. 6:e16126.
Wojniusz S, Vogele C, Ropstad E, Evans N, Robinson J, Suetterlin S, Erhard HW, Solbakk AK, Endestad T, Oldberg DE et al..  2011.  Prepubertal gonadotropin-releasing hormone analog leads to exagerrated behavioral and emotional sex differences in sheep. Hormones and Behavior. 59:22-27.
DeGabriel JL, Albon SD, Fielding DA, Riach DJ, Westaway S, Irvine RJ.  2011.  The presence of sheep leads to increases in plant diversity and reductions in the impact of deer on heather. Journal of Applied Ecology. 48:1269-1277.
Gilroy EM, Breen S, Whisson SC, Squires J, Hein I, Kaczmarek M, Turnbull D, Boevink P, Lokossou A, Cano LM et al..  2011.  Presence/absence, differential expression and sequence polmorphisms between PiAVR2 and PiAVR2-like in Phytophthora infestans determine virulence on R2 plants. New Phytologist. 191:763-776.
Evans J, Knight H, McKendrick IJ, Stevenson H, Barbudo AV, Gunn GJ, Low JC.  2011.  Prevalence of Escherichia coli O157: H7 and serogroups O26, O103, O111 and O145 in sheep presented for slaughter in Scotland. Journal of Medical Microbiology. 60:653-660.
Coyle DR, Clark KE, Raffa KF, Johnson SN.  2011.  Prior host feeding experience influences ovipositional but not feeding preference in a polyphagous insect herbivore. Entomologia Experimentalis et Applicata. 138:137-145.
Poggio L, Soille P.  2011.  A probabilistic approach to river network detection in digital elevation models. Catena. 87:341-350.
Gontikaki E, Mayor DJ, Thornton B, Black K, Witte U.  2011.  Processing of 13C-labelled diatoms by a bathyal community at sub-zero temperatures. Marine Ecology Progress Series. 421:39-50.
Selge S, Fischer A, van der Wal R.  2011.  Public and professional views on invasive non-native species - a qualitative social scientific investigation. Biological Conservation. 144:3089-3097.
Nijnik M, Miller DR, Nijnik, M.; Mather A, Fiorini S, Vogt N, Brondizio E, Morrice JG.  2011.  Public participation for planning the sustainable use of natural resources and landscape changes. International Journal of Interdisciplinary Social Sciences. 5:303-320.
Moles AT, Wallis IR, Foley WJ, Warton DI, Bisigato AJ, Clark CJ, Cohen PS, Cornwell WK, Edwards EWR, Gonzales-Ojeda T et al..  2011.  Putting plant defences on the map: a test of the idea that plants are better defended at lower latitudes. New Phytologist. 191:777-788.
Donnelly RE, Katzner T, Gordon IJ, Gompper ME, Redpath S, Garner TWJ, Altwegg R, Reed DH, Acevedo-Whitehouse K, Pettorelli N.  2011.  Putting the eco back in ecotourism. Animal Conservation. 14:325-327.
Vinuela-Fernandez I, Jones E, McKendrick IJ, Molony V.  2011.  Quantitative assessment of increased sensitivity of chronic laminitic horses to hoof tester evoked pain. Equine Veterinary Journal. 43:62-68.
Matthews KB, Rivington M, Blackstock KL, McCrum G, Buchan K, Miller DG.  2011.  Raising the bar? The challenge of evaluating the outcomes of environmental modelling and software Environmental Modelling and Software. 26:247-257.
Belenguer A, Holtrop G, Duncan SH, Anderson SE, Calder AG, Flint HJ, Lobley GE.  2011.  Rates of production and utilization of lactate by microbial communities from the human colon. FEMS Microbiology Ecology. 77:107-119.
Goodman BA, Pascual EC, Yeretzian C.  2011.  Real time monitoring of free radical processes during the roasting of coffee beans using electron paramagnetic resonance spectroscopy. Food Chemistry. 125:248-254.
Mantelin S, Peng H, Li B, tamian HS, Takken FLW, Kaloshian I.  2011.  The receptor-like kinase SlSERK1 is required for Mi-1-mediated resistance to potato aphids in tomato. Plant Journal. 67:459-471.
Hammond JP, Mayes S, Bowen HC, Graham NS, Hayden RM, Love CG, Spracklen WP, Wang J, Welham SJ, White PJ et al..  2011.  Regulatory hotspots are associated with plant gene expression under varying soil phosphorus supply in Brassica rapa. Plant Physiology. 156:1230-1241.
Rojas I, Becerra P, Galvez N, Laker J, Bonacic C, Hester AJ.  2011.  Relationship between fragmentation, degradation and native and exotic species richness in an Andean temperate forest in Chile. Gayana Botanica. 68:163-175.
Marshall NA, Gordon IJ, Ash AJ.  2011.  The reluctance of resource-users to adopt seasonal climate forecasts to enhance resilience to climate variability on the rangelands. Climatic Change. 107:507-529.
Chung BN, Palukaitis P.  2011.  Resistance to multiple viruses in transgenic tobacco expressing fused, tandem repeat, virus-derived double-stranded RNAs. Virus Genes. 43:454-464.
Silvar C, Casas AM, Igartua E, Ponce-Molina LJ, Gracia MP, Schweizer G, Herz M, Flath K, Waugh R, Kopahnke D et al..  2011.  Resistance to powdery mildew in Spanish barley landraces is controlled by different sets of quantitative trait loci. Theoretical and Applied Genetics. 123:1019-1028.
Sparrow AD, Gregorich EG, Hopkins DW, Novis P, Elberling B, Greenfield LG.  2011.  Resource limitations on soil microbial activity in an Antarctic dry valley. Soil Science Society of America Journal. 75:2188-2197.
Nazaries L, Tate KR, Ross DJ, Singh J, Dando J, Saggar S, Baggs EM, Millard P, Murrell JC, Singh BK.  2011.  Response of methanotrophic communities to afforestation and reforestation in New Zealand. ISME Journal. 5:1832-1836.
Curlevski NJA, Artz RRE, Anderson IC, Cairney JWG.  2011.  Response of soil microbial communities to management strategies for enhancing Scots pine (Pinus sylvestris) establishment on heather (Calluna vulgaris) moorland. Plant and Soil. 339:413-424.
Crawfurd KJ, Raven JA, Wheeler GL, Baxter EJ, Joint I.  2011.  The response of Thalassiosira pseudonana to long-term exposure to increased CO2 and decreased pH. PLoS ONE. 6:e26995.
Sibbald AM, Hooper RJ, McLeod JE, Gordon IJ.  2011.  Responses of red deer (Cervus elaphus) to regular disturbance by hill walkers. European Journal of Wildlife Research. 57:817-825.
Kennedy E, Curran J, Mayes B, McEvoy M, Murphy JP, O'Donovan M.  2011.  Restricting dairy cow access time to pasture in early lactation: the effects on milk production, grazing behaviour and dry matter intake. Animal. 5:1805-1813.
Beesley L, Moreno-Jimenez E, Gomez-Eyles JL, Harris E, Robinson B, Sizmur T.  2011.  A review of biochars' potential role in the remediation, revegetation and restoration of contaminated soils. Environmental Pollution. 159:3269-3282.
Balana BB, Vinten AJA, Slee B.  2011.  A review on cost-effectiveness analysis of agri-environmental measures related to the EU WFD: Key issues, methods, and applications. Ecological Economics. 70:1021-1031.
Fuschino JR, Guschina IA, Dobson G, Yan ND, Harwood JL, Arts MT.  2011.  Rising water temperatures alter lipid dynamics and reduce N-3 essential fatty acid concentrations in Scenedesmus obliquus (Chlorophyta). Journal of Phycology. 47:763-774.
Fuschino JR, Guschina IA, Dobson G, Yan ND, Harwood JL, Arts MT.  2011.  Rising water temperatures alter lipid dynamics and reduce N-3 essential fatty acid concentrations in Scenedesmus obliquus (chlorophyta). Journal of Phycology. 47:763-764.
Aalders IH, Hough RL, Towers W.  2011.  Risk of erosion in peat soils - an investigation using Bayesian belief networks. Soil Use and Management. 27:538-549.
Ashfaq M, McGavin WJ, MacFarlane SA.  2011.  RNA2 of TRV SYM breaks the rules for tobravirus genome structure. Virus Research. 160:435-438.
Lian XM, Zhang TZ, Cao YC, Su JP, Thirgood SJ.  2011.  Road proximity and traffic flow perceived as potential predation risks: evidence from the Tibetan antelope in the Kekexili National Nature Reserve, China. Wildlife Research. 38:141-146.
Jiang N, Wang MH, Jia TY, Wang L, Leach L, Hackett CA, Marshall DF, Luo ZW.  2011.  A robust statistical method for association-based eQTL analysis. PLoS ONE. 6:e23192.
Bengough AG, McKenzie BM, Hallett PD, Valentine TA.  2011.  Root elongation, water stress, and mechanical impedance: a review of limiting stresses and beneficial root tip traits. Journal of Experimental Botany. 62:59-68.
Carvalhais LC, Dennis PG, Fedoseyenko D, Hajirezaei MR, Borriss R, von Wiren N.  2011.  Root exudation of sugars, amino acids, and organic acids by maize as affected by nitrogen, phosphorus, potassium, and iron deficiency. Journal of Plant Nutrition and Soil Science. 174:3-11.
Lux A, Martinka M, Vaculik M, White PJ.  2011.  Root responses to cadmium in the rhizosphere: a review. Journal of Experimental Botany. 62:21-37.
Luo S, Tai H, Zebarth B, Li XQ, Millard P, De Koeyer D, Xiong X.  2011.  Sample collection protocol effects on quantification of gene expression in potato leaf tissue. Plant Molecular Biology Reporter. 29:369-378.
Newton AC, Guy DC.  2011.  Scale and spatial structure effects on the outcome of barley cultivar mixture trials for disease control. Field Crops Research. 123:74-79.
Warren CR, McKee AJ.  2011.  The Scottish revolution? Evaluating the impacts of post devolution land reform Scottish Geographical Journal. 127:17-39.
Dawson JJC, Tetzlaff D, Speed M, Hrachowitz M, Soulsby C.  2011.  Seasonal controls on DOC dynamics in nested upland catchments in NE Scotland. Hydrological Processes. 25:1647-1658.
Salmela MJ, Cavers S, Wachowiak W, Cottrell JE, Iason GR, Ennos RA.  2011.  Seasonal patterns of photochemical capacity and spring phenology reveal genetic differentiation among native Scots pine (Pinus sylvetsris L.) populations in Scotland. Forest Ecology and Management. 262:1020-1029.
Chen YP, Hocking PM, Wang L, Povazay B, Prashar A, To CH, Erichsen JT, Feldkaemper M, Hofer B, Drexler W et al..  2011.  Selective breeding for susceptibility to myopia reveals a gene-environment interaction. Investigative Ophthalmology and Visual Science. 52:4003-4011.
Zhang Z, Rhind SM, Kerr C, Osprey M, Kyle C.  2011.  Selective pressured liquid extraction of estrogenic compounds in soil and analysis by gas chromatography - mass spectrometry. Analytica Chimica Acta. 685:29-35.
Hart DJ, Fairweather-Tait SJ, Broadley MR, Dickinson SJ, Foot I, Knott P, McGrath SP, Mowat H, Norman K, Scott PR et al..  2011.  Selenium concentration and speciation in biofortified flour and bread: Retention of selenium during grain biofortification, processing and production of Se-enriched food. Food Chemistry. 126:1771-1778.
Scott V, Kettle H, Merchant C.  2011.  Sensitivity analysis of an ocean carbon cycle model in the North Atlantic: An investigation of parameters affecting the air-sea CO2 flux, primary production and export of detritus. Ocean Science. 7:405-419.
Hagemann N, Prager K.  2011.  Shortcomings of political instruments for agricultural soil conservation. Berichte uber Landwirtschaft. 89:331-350.
Vetukuri RR, Tian ZD, Avrova AO, Savenkov EI, Dixelius C, Whisson SC.  2011.  Silencing of the PiAtvr3a effector-encoding gene from Phytophthora infestans by transcriptional fusion to a short interspersed element. Fungal Biology. 115:1225-1233.
Minet E, Goodhue R, Coxon CE, Kalin RM, Meier-Augenstein W.  2011.  Simplifying and improving the extraction of nitrate from freshwater for stable isotope analyses. Journal of Environmental Monitoring. 13:2062-2066.
Zhang Z, Ohiozebau E, Rhind SM.  2011.  Simultaneous extraction and clean-up of polybrominated diphenyl ethers and polychlorinated biphenyls from sheep liver tissue by selective pressurized liquid extraction and analysis by gas chromatography - mass spectrometry. Journal of Chromatography A. 1218:1203-1209.
Corby HDL, Smith DL, Sprent JI.  2011.  Size, structure and nitrogen content of seeds of Fabaceae in relation to nodulation. Botanical Journal of the Linnean Society. 167:251-280.
Prager K, Schuler J, Helming K, Zander P, Ratinger T, Hagedorn K.  2011.  Soil degradation, farming practices, institutions and policy responses: An analytical framework. Land Degradation and Development, Special Issue, The Challenge of Effective Soil Conservation Policies.. 22:32-46.
Powlson DS, Gregory PJ, Whalley WR, Quinton JN, Hopkins DW, Whitmore AP, Hirsch PR, Goulding KWT.  2011.  Soil management in relation to sustainable agriculture and ecosystem services. Food Policy. 36:S72-S87.
Krivtsov V, Griffiths BS, Liddell K, Garside A, Salmond R, Bezginova T, Thompson J.  2011.  Soil nitrogen availability is reflected in the bacterial pathway. Pedosphere. 21:26-30.
Powlson DS, Brookes PC, Whitmore AP, Goulding KWT, Hopkins DW.  2011.  Soil organic matters. European Journal of Soil Science. 62:1-4.
Yao H, Campbell CD, Qiao XR.  2011.  Soil pH controls nitrification and carbon substrate utilization more than urea or charcoal in some highly acidic soils. Biology and Fertility of Soils. 47:515-522.
Taylor MA, Fraser PD.  2011.  Solanesol: added value from solanaceous waste. Phytochemistry. 72:1323-1327.
Brewer MJ, Tetzlaff D, Malcolm IA, Soulsby C.  2011.  Source distribution modelling for end-member mixing in hydrology. Environmetrics. 22:921-932.
Ceccon C, Panzacchi P, Scandellari F, Prandi L, Ventura M, Russo B, Millard P, Tagliavini M.  2011.  Spatial and temporal effects of soil temperature and moisture and the relation to fine root density on root and soil respiration in a mature apple orchard. Plant and Soil. 342:195-206.
Polhill JG, Gimona A, Aspinall R.  2011.  Special issue: agent-based modelling of land use effects on ecosystem processes and services. Journal of Land Use Science. 6:75-81.
Andrivon D, Avendano-Corcoles J, Cameron AM, Carnegie SF, Cooke LR, Corbiere R, Detourne D, Dowley LJ, Evans D, Forisekova K et al..  2011.  Stability and variability of virulence of Phytophthora infestans assessed in a ring test across European laboratories. Plant Pathology. 60:556-565.
Squire GR, Breckling B, Pfeilstetter AD, Jorgensen RB, Lecomte J, Pivard S, Reuter H, Young MW.  2011.  Status of feral oilseed rape in Europe: its minor role as a GM impurity and its potential as a reservoir of transgene persistence. Environmental Science and Pollution Research. 18:111-115.
Giammaria V, Grandellis C, Bachmann S, Gargantini PR, Feingold SE, Bryan GJ, Ulloa RM.  2011.  StCDPK2 expression and activity reveal a highly responsive potato calcium-dependent protein kinase involved in light signalling. Planta. 233:593-609.
Rasmussen JJ, Baattrup-Pedersen A, Riis T, Friberg N.  2011.  Stream ecosystem properties and processes along a temperature gradient. Aquatic Ecology. 45:231-242.
Demars BOL, Manson JR, Olafsson JS, Gislason GM, Friberg N.  2011.  Stream hydraulics and temperature determine the metabolism of geothermal Icelandic streams. Knowledge Management of Aquatic Ecosystem. 402:17pp.
Bisi F, Newey SJ, Nodari M, Wauters LA, Harrison A, Thirgood SJ, Martinoli A.  2011.  The strong and the hungry: Bias in capture methods for mountain hares Lepus timidus. Wildlife Biology. 17:311-316.
Belanche A, Abecia L, Holtrop G, Guada JA, Castrillo C, de la Fuente G, Balcells J.  2011.  Study of the effect of presence or absence of protozoa on rumen fermentation and microbial protein contribution to the chyme. Journal of Animal Science. 89:4163-4174.
Hammond JP, White PJ.  2011.  Sugar signalling in root responses to low phosphorus availability. Plant Physiology. 156:1033-1040.
Barakate A, Stephens J, Goldie A, Hunter WN, Marshall DF, Hancock RD, Lapierre C, Morreele K, Boerjane W, Halpin C.  2011.  Syringyl lignin is unaltered by severe sinapyl alcohol dehydrogenase suppression in tobacco. Plant Cell. 23:4492-4506.
Pritchard L, Birch PRJ.  2011.  A systems biology perspective on plant-microbe interactions: Biochemical and structural targets of pathogen effectors. Plant Science. 180:584-603.
O' Lochlainn SE, Bowen HC, Fray RG, Hammond JP, King GJ, White PJ, Graham NS, Broadley MR.  2011.  Tandem quadruplication of HMA4 in the zinc (Zn) and cadmium (Cd) hyperaccumulator Noccaea caerulescens. PLoS ONE. 6:e17814.
Bengsen AJ, Leung LKP, Lapidge SJ, Gordon IJ.  2011.  Target-specificity of feral pig baits under different conditions in a tropical rainforest. Wildlife Research. 38:370-378.
Alexandrov GA, Ames D, Aumann C, Bellocchi G, Bruen M, Crout N, Erechtchoukova M, Hildebrandt A, Hoffman F, Jackisch C et al..  2011.  Technical assessment and evaluation of environmental models and software: Letter to the Editor. Environmental Modelling and Software. 26:328-336.
Martin-Fernandez JA, Palarea-Albaladejo J, Barcelo-Vidal C.  2011.  Tecnicas composicionales para concentraciones geoquimicas por debajo del limite de deteccion. Boletin Instituto Geologico y Minero de Espana. 122:459-468.
Dicker AJ, Nath M, Yaga R, Nisbet AJ, Lainson FA, Gilleard JS, Skuce PJ.  2011.  Teladorsagia circumcincta: The transcriptomic response of a multi-drug-resistant isolate to ivermectin exposure in vitro. Experimental Parasitology. 127:351-356.
Demars BOL, Manson JR, Olafsson JS, Gislason GM, Gudmundsdottir R, Woodward G, Reiss J, Pichler D, Rasmussen JJ, Friberg N.  2011.  Temperature and the metabolic balance of streams. Freshwater Biology. 56:1106-1121.
Tolkamp BJ, Allcroft DJ, Barrio JP, Bley TAG, Howie JA, Jacobsen TB, Morgan CA, Schweitzer DPN, Wilkinson S, Yeates MP et al..  2011.  The temporal structure of feeding behaviour. American Journal of Physiology - Regulatory, Integrative and Comparative Physiology. 301:R378-R393.
Zetsche E, Paterson DM, Lumsdon DG, Witte U.  2011.  Temporal variation in the sediment permeability of an intertidal sandflat. Marine Ecology Progress Series. 441:49-63.
Jacobs AAA, Scheper JA, Benvenutti MA, Gordon IJ, Poppi DP, Elgersma A.  2011.  Tensile fracture properties of seven tropical grass species at different phenological stages. Grass and Forage Science. 66:551-559.
Bengsen AJ, Leung L, Lapidge SJ, Gordon IJ.  2011.  Testing target-specific bait delivery for controlling feral pigs in a tropical rainforest. Ecological Management and Restoration. 12:226-229.
Subramanian NK, White PJ, Broadley MR, Ramsay G.  2011.  The three dimensional distribution of minerals in potato tubers. Annals of Botany. 107:681-691.
Stutter MI, Lumsdon DG, Rowland AP.  2011.  Three representative UK moorland soils show differences in decadal release of dissolved organic carbon in response to environmental change. Biogeosciences. 8:3661-3675.
Aspinall RJ.  2011.  Toward a regional and world geography under a changed climate. Eurasian Geography and Economics. 52:1-11.
Sutherland LA, Barnes A, McCrum G, Blackstock KL, Toma L.  2011.  Towards a cross-sectoral analysis of land use decision-making in Scotland. Landscape and Urban Planning. 100:1-10.
Graham J, Hackett CA, Smith K, Woodhead M, MacKenzie K, Tierney I, Cooke DEL, Bayer MM, Jennings N.  2011.  Towards an understanding of the nature of resistance to Phytophthora root rot in red raspberry. Theoretical and Applied Genetics. 123:585-601.
Pakeman RJ, Lennon JJ, Brooker RW.  2011.  Trait assembly in plant assemblages and its modulation by productivity and disturance. Oecologia. 167:209-218.
Massa AN, Childs KL, Lin HN, Bryan GJ, Giuliano G, Buell CR.  2011.  The transcriptome of the reference potato genome Solanum tuberosum group phureja clone DM1-3 516R44. PLoS ONE. 6:e26801.
Cook N, Aziz N, Hedley PE, Morris J, Milne L, Karley AJ, Hubbard SF, Russell JR.  2011.  Transcriptome sequencing of an ecologically important graminivorous sawfly: a resource for marker development. Conservation Genetics Resources. 3:789-795.
Millard P, Way D.  2011.  Tree competition and defense against herbivores: currency matters when counting the cost. Tree Physiology. 31:579-581.
Street LE, Subke JA, Sommerkorn M, Heinemeyer A, Williams M.  2011.  Turnover of recently assimilated carbon in arctic bryophytes. Oecologia. 167:325-337.
Rakitina DV, Taliansky ME, Brown JWS, Kalinina NO.  2011.  Two RNA-binding sites in plant fibrillarin provide interactions with various RNA substrates. Nucleic Acids Research. 39:8869-8880.
Augusto L, Zeller B, Midwood AJ, Swanston C, Dambrine E, Schneider A, Bosc A.  2011.  Two year dynamics of foliage labelling in 8 year-old Pinus pinaster trees with 15N 26Mg and 42Ca - simulation of Ca transport using an upscaling approach. Annals of Forest Science. 68:169-178.
Bell MJ, Worrall F, Smith P, Bhogal A, Black HIJ, Lilly A, Barraclough D, Merrington G.  2011.  UK land-use change and its impact on SOC: 1925-2007. Global Biogeochemical Cycles. 25
Adams T, Ackland G, Marion G, Edwards C.  2011.  Understanding plantation transformation using a size-structured spatial population model. Forest Ecology and Management. 261:799-809.
Quilliam R, Williams AP, Avery L, Malham S, Jones D.  2011.  Unearthing human pathogens at the agricultural-environment interface: A review of current methods for the detection of Escherichia coli O157 in freshwater ecosystems. Agriculture, Ecosystems and Environment. 140:354-360.
Lewis F, Butler A, Gilbert L.  2011.  A unified approach to model selection using the likelihood ratio test. Methods in Ecology and Evolution. 2:155-162.
Fischer A, Bednar-Friedl B, Langers F, Dobrovodska M, Geamana N, Skogen K, Dumortier M.  2011.  Universal criteria for species conservation priorities? Findings from a survey of public views across Europe Biological Conservation. 144:998-1007.
Mayer KFX, Martis M, Hedley PE, Simkova H, Liu H, Morris JA, Steuernagel B, Taudien S, Roessner S, Gundlach H et al..  2011.  Unlocking the barley genome by chromosomal and comparative genomics. Plant Cell. 23:1249-1263.
Torrance L, Wright KM, Crutzen F, Cowan GH, Lukhovitskaya NI, Bragard C, Savenkov EI.  2011.  Unusual features of pomoviral RNA movement. Frontiers in Plant Microbe Interactions. 2:259.
Bengsen AJ, Leung LKP, Lapidge SJ, Gordon IJ.  2011.  Using a general index approach to analyse camera-trap abundance indices. Journal of Wildlife Management. 75:1222-1227.
Granger SJ, Bol R, Hawkins JMB, White SM, Naden PS, Old GH, Marsh JK, Bilotta GS, Brazier RE, Macleod CJA et al..  2011.  Using artificial fluorescent particles as tracers of livestock wastes within an agricultural catchment. Science of the Total Environment. 409:1095-1103.
Glenk K.  2011.  Using local knowledge to model asymmetric preference formation in willingness to pay for environmental services. Journal of Environmental Management. 92:531-541.
Birkel CB, Tetzlaff DT, Dunn SM, Soulsby C.  2011.  Using lumped conceptual rainfall-runoff models to simulate daily isotope variability with fractionation in a nested mesoscale catchment. Advances in Water Resources. 34:383-394.
Birkel CB, Tetzlaff D, Dunn SM, Soulsby C.  2011.  Using time domain and geographic source tracers to conceptualize streamflow generation processes in lumped rainfall-runoff models. Water Resources Research. 47:15pp.
Zetsche E, Thornton B, Midwood AJ, Witte U.  2011.  Utilisation of different carbon sources in a shallow estuary identified through stable isotope techniques. Continental Shelf Research. 31:832-840.
Morris WL, Ducreux LJM, Shepherd T, Lewinsohn E, Davidovich-Rikanati R, Sitrit Y, Taylor MA.  2011.  Utilisation of the MVA pathway to produce elevated levels of the sesquiterpene alpha copaene in potato tubers. Phytochemistry. 72:2288-2293.
Ascough PL, Bird MI, Francis SM, Thornton B, Midwood AJ, Scott A, Apperley D.  2011.  Variability in oxidative degradation of charcoal: influence of production variables and environmental exposure. Geochimica et Cosmochimica Acta. 75:2361-2378.
Hill PW, Farrar J, Roberts P, Farrell M, Grant H, Newsham KK, Hopkins DW, Bardgett RD, Jones DL.  2011.  Vascular plant success in a warming Antarctic may be due to efficient nitrogen acquisition. Nature Climate Change. 1:50-53.
Goddard PJ.  2011.  Welfare assessment in sheep. In Practice. 33:508-516.
2012
Sutherland LA, Gabriel D, Hathaway-Jenkins L, Pascual U, Schmutz U, Rigby D, Godwin R, Sait S, Sakrabani R, Kunin B et al..  2012.  The 'neighbourhood effect': a multidisciplinary assessment of the case for farmer co-ordination in agri-environmental programmes. Land Use Policy. 29:502-512.
Foyer CH, Kerchev P, Hancock RD.  2012.  The ABA-Insensitive-4 (AB14) transcription factor links redox, hormone and sugar signalling pathways (Review). Plant Signaling and Behavior. 7:276-281.
Koichi K, Mayer R, Kaur K, Cottrell AA, Gordon IJ.  2012.  Aboriginal rangers' perspectives on feral pigs: are they a pest or a resource? A case study in the wet tropics world heritage area of Northern Queensland Journal of Australian Indigenous Issues. 15:2-19.
Johnson SN, Clark KE, Hartley SE, Jones TH, McKenzie SW, Koricheva J.  2012.  Aboveground-belowground herbivore interactions: a meta-analysis. Ecology. 93:2208-2215.
Catterall S, Cook AR, Marion G, Butler A, Hulme PE.  2012.  Accounting for uncertainty in colonisation times: a novel approach to modelling the spatio-temporal dynamics of alien invasions using distribution data. Ecography. 35:901-911.
Santos PM, Thornton B, Corsi M.  2012.  Adaptation of the C-4 grass panicum maximum to defoliation is related to plasticity of N uptake, mobilisation and allocation patterns. Scientia Agricola. 69:293-299.
Cammarano D, Payero J, Basso B, Stefanova L, Grace P.  2012.  Adapting wheat sowing dates to projected climate change in the Australian sub-tropics: analysis of crop water use and yield. Crop and Pasture Science.
Nijnik M, Oskam A, Nijnik, M.; Mather A.  2012.  Afforestation for the provision of multiple ecosystem services: a Ukrainian case study. International Journal of Forestry Research, 2012, Article ID 295414, 12pp..
Raven JA.  2012.  Algal biogeography: metagenomics shows distribution of a picoplanktonic pelagophyte. Current Biology. 22:R682-R683.
Raven JA, Giordano M, Beardall J, Maberly SC.  2012.  Algal evolution in relation to atmospheric CO2: carboxylases, carbon-concentrating mechanisms and carbon oxidation cycles. Philosophical Transactions of the Royal Society, B. 367:493-507.
Dupuy LX, Vignes M.  2012.  An algorithm for the simulation of the growth of root systems on deformable domains. Journal of Theoretical Biology. 310:164-174.
Pritchard L, Holden NJ, Bielaszewska M, Karch H, Toth IK.  2012.  Alignment-free design of highly discriminatory diagnostic primer sets for Escherichia coli O104:H4 outbreak strains. PLoS ONE. 7:e34498.
Spies A, Korzun V, Bayles R, Rajaraman J, Himmelback A, Hedley PE, Schweizer P.  2012.  Allele mining in barley genetic resources reveals genes of race-non-specific powdery mildew resistance. Frontiers in Plant Science. 2:113.
Rodriguez-Gutierrez G, Duthie GG, Wood S, Morrice P, Nicol F, Reid M, Cantlay LL, Kelder T, Horgan GW, Fernandez-Bolanos Guzman J et al..  2012.  Alperujo extract, hydroxytyrosol, and 3,4-dihydroxyphenylglycol are bioavailable and have antioxidant properties in vitamin e-deficient ratsua proteomics and network analysis approach. Molecular Nutrition and Food Research. 56:1131-1147.
Kalyna M, Simpson CG, Syed NH, Lewandowska D, Marquez Y, Kusenda B, Marshall J, Fuller J, Cardle L, McNicol JW et al..  2012.  Alternative splicing and nonsense-mediated decay modulate expression of important regulatory genes in Arabidopsis. Nucleic Acids Research. 40:2454-2469.
Syed NH, Kalyna M, Marquez Y, Barta A, Brown JWS.  2012.  Alternative splicing in plants - coming of age. Trends in Plant Science. 17:616-623.
James A, Syed NH, Bordage S, Marshall J, Nimmo GA, Jenkins GI, Herzyk P, Brown JWS, Nimmo HG.  2012.  Alternative splicing mediates responses of the Arabidopsis thaliana circadian clock to temperature changes. The Plant Cell. 24:961-981.
Bingham IJ, Karley AJ, White PJ, Thomas WTB, Russell JR.  2012.  Analysis of improvements in nitrogen use efficiency associated with 75 years of spring barley breeding. European Journal of Agronomy. 42:49-58.
Houston K, Druka A, Bonar N, Macaulay M, Lundqvist U, Franckowiak JD, Morgante M, Stein N, Waugh R.  2012.  Analysis of the barley bract suppression gene Trd1. Theoretical and Applied Genetics. 125:33-45.
De Smet I, White PJ, Bengough AG, Dupuy L, Parizot B, Casimiro I, Heidstra R, Laskowski M, Lepetit M, Hochholdinger F et al..  2012.  Analyzing lateral root development: how to move forward. The Plant Cell. 24:15-20.
Morenoa FC, Gordon IJ, Knox MR, Summer PM, Skerrat LF, Benvenutti MA, Saumell CA.  2012.  Anthelmintic efficacy of five tropical native Australian plants against Haemonchus contortus and Trichostrongylus colubriformis in experimentally infected goats (Capra hircus). Veterinary Parasitology. 187:237-243.
Rhind SM.  2012.  Anthropogenic pollutants - a insidious threat to animal health and productivity? Acta Veterinaria Scandinavica. 54:S2.
Bernaert N, De Paepe D, Bouten C, Declercq H, Stewart D, Van Bockstaele E, De Loose M, Van Droogenbroeck B.  2012.  Antioxidant capacity, total phenolic and ascorbate content as a function of the genetic diversity of leek (Allium ampeloprasum var. porrum). Food Chemistry. 134:669-677.
Troldborg M, Nowak W, Lange IV, Santos MC, Binning PJ, Bjerg PL.  2012.  Application of Bayesian geostatistics for evaluation of mass discharge uncertainty at contaminated sites. Water Resources Research. 48
Vinten AJA, Martin-Ortega J, Glenk K, Booth P, Balana BB, MacLeod M, Lago M, Moran D, Jones M.  2012.  Application of the WFD cost proportionality principle to diffuse pollution mitigation: a case study for Scottish Lochs. Journal of Environmental Management. 97:28-37.
Koichi K, Cottrell A, Sangha KK, Gordon IJ.  2012.  Are feral pigs (Sus scrofa) a pest to rainforest tourism? Journal of Ecotourism. 11:132-148.
Ascher J, Sartori G, Graefe U, Thornton B, Ceccherini MT, Pietramellara G, Egli M.  2012.  Are humus forms, mesofauna and microflora in subalpine forest soils sensitive to thermal conditions? Biology and Fertility of Soils. 48:709-725.
Minh ND, Hough RL, Thuy LT, Nyberg Y, Mai LB, Vinh NC, Khai NM, Oborn I.  2012.  Assessing dietary exposure to cadmium in a metal recycling community in Vietnam: age and gender aspects. Science of the Total Environment. 416:164-171.
Wemelsfelder F, Hunter AE, Paul ES, Lawrence AB.  2012.  Assessing pig body language: agreement and consistency between pig farmers, veterinarians, and animal activists. Journal of Animal Science. 90:3652-3665.
Kleyer M, Dray S, de Bello F, Leps J, Pakeman RJ, Strauss B, Thuiller W, Lavorel S.  2012.  Assessing species and community functional responses to environmental gradients: which multivariate methods? Journal of Vegetation Science. 23:805-821.
Bartley K, Huntley JF, Wright HW, Nath M, Nisbet AJ.  2012.  Assessment of cathepsin D and L-like proteinases of poultry red mite, Dermanyssus gallinae (De Geer), as potential vaccine antigens. Parasitology. 139:755-765.
Berbel J, Kolberg S, Martin-Ortega J.  2012.  Assessment of the draft hydrological basin plan of the Guadalquivir River Basin (Spain). Water Resources Development.. 28:43-55.
MacKenzie K, Hackett CA.  2012.  Association mapping in a simulated barley population. Euphytica. 183:337-347.
Gregory PJ, Marshall B.  2012.  Attribution of climate change: a methodology to estimate the potential contribution to increases in potato yield in Scotland since 1960. Global Change Biology. 18:1372-1388.
Wang C, Wan TR, Palmer IJ.  2012.  Automatic reconstruction of 3D environment using real terrain data and satellite images. Intelligent Automation and Soft Computing. 18:49-63.
Jordan MO, Wendler R, Millard P.  2012.  Autumnal N storage determines the spring growth, N uptake and N internal cycling of young peach trees. Trees - Structure and Function. 26:393-404.
Wawra S, Agacan M, Boddey JA, Davidson I, Gachon CMM, Zanda M, Grouffaud S, Whisson SC, Birch PRJ, Porter AJ et al..  2012.  Avirulence protein 3a (AVR3a) from the potato pathogen Phytophthora infestans forms homodimers through its predicted translocation region and does not specifically bind phospholipids. Journal of Biological Chemistry. 287:38101-38109.
Thomas CR, Gordon IJ, Wooldridge S, Marshall P.  2012.  Balancing the trade-offs between ecological and economic risks in the Great Barrier Reef: a pragmatic conceptual framework. Human and Ecological Risk Assessment.. 18:69-91.
Martin-Ortega J, Brouwer R, Ojea E, Berbel J.  2012.  Benefit transfer and spatial heterogeneity of preferences for water quality improvements. Journal of Environmental Management. 106:22-29.
Boath AS, Stewart D, McDougall GJ.  2012.  Berry components inhibit alpha-glucosidase in vitro: synergies between acarbose and polyphenols from black currant and rowanberry. Food Chemistry. 135:929-936.
Boath AS, Grussu D, Stewart D, McDougall GJ.  2012.  Berry polyphenols inhibit digestive enzymes: a source of potential health benefits? Food Digestion. 3:1-7.
White PJ, Broadley MR, Hammond JP, Ramsay G, Subramanian NK, Thompson JA, Wright GM.  2012.  Bio-fortification of potato tubers using foliar zinc-fertiliser. Journal of Horticultural Science and Biotechnology. 87:123-129.
Talevich E, Invergo BM, Cock PJA, Chapman BA.  2012.  Bio.Phylo: a unified toolkit for processing, analyzing and visualizing phylogenetic trees in Biophyton. BMC Bioinformatics. 13:209.
Dawson JJC, Adhikari YR, Soulsby C, Stutter MI.  2012.  The biogeochemical reactivity of suspended particulate matter at nested sites in the Dee basin, NE Scotland. Science of the Total Environment. 434:159-170.
Griffiths BS, Daniell TJ, Donn S, Neilson R.  2012.  Bioindication potential of using molecular characterisation of the nematode community: response to soil tillage. European Journal of Soil Biology. 49:92-97.

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The James Hutton Research Institute is the result of the merger in April 2011 of MLURI and SCRI. This merger formed a new powerhouse for research into food, land use, and climate change.