Publications list
Phosphorus loss in overfertilized soils: The selective P partitioning and redistribution between particle size separates. European Journal of Agronomy. 27(1):72-80.
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2007.
Myocardial and systemic inflammation in acute stress-induced (Takotsubo) cardiomyopathy. Circulation. 129:1581-1592.
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2019.
Water balance dynamics during ten years of ecological development at ChickenCreek catchment. Vadose Zone Journal. 16:1-14.
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2017.
Use of genome sequence data in the design and testing of SSR markers for Phytophthora species. BMC Genomics. 9:620-643. Abstract
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2008.
Detection and quantification of Phytophthora ramorum, P. kernoviae, P. citricola and P. quercina in symptomatic leaves by multiplex real-time PCR. Molecular Plant Pathology. 7:365-379. Abstract
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2006.
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2008.
Assessing the potential of regions of the nuclear and mitochondrial genome to develop a 'molecular tool box' for the detection and characterization of Phytophthora species. Journal of Microbiological Methods. 67:70-85. Abstract
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2006.
Limited evolutionary rescue of locally adapted populations facing climate change. Philosophical Transactions of the Royal Society B. 368:e20120083.
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2013.
Editorial: Plants as alternative hosts for human and animal pathogens - second edition. Frontiers in Microbiology. 11:ArticleNo.1439.
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2020.
Long-term macronutrient stoichiometry of UK ombrotrophic peatlands. Science of the Total Environment. 572:1561-1572.
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2016.
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2016.
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2019.
The plant microbiome at work. Molecular Plant Microbe Interactions. 28:212-217.
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2015.
Comparative genetic mapping reveals synteny and collinearity between the American cranberry and diploid blueberry genomes. Molecular Breeding. 38:ArticleNo.9.
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2018.
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2018.
The susceptibility of selected conifer foliage to infection with Phytophthora lateralis. Forest Pathology. 47:ArticleNo.e12333.
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2017.
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2019.
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2011.
The role of Variovorax and other Comamonadaceae in sulphur transformations by microbial wheat rhizosphere communities exposed to different sulphur fertilization regimes. Environmental Microbiology. 10(6):1486-1500.
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2008.
Estimating root-soil contact from 3-D X-ray microtomographs. European Journal of Soil Science. 63:776-786.
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2012.
The mixotrophic nature of photosynthetic plants. Functional Plant Biology. 40:425-438.
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2013.
Ancient barley landraces adapted to marginal soils demonstrate exceptional tolerance to manganese limitation. Annals of Botany.. 123:831-843.
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2019.
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2013.
Inferring the origin and dietary history of beef from C, N and S stable isotope ratio analysis. Food Chemistry. 91:545-549. Abstract
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2005.
Evolution of facilitation requires diverse communities. Nature Ecology and Evolution. 2:1381-1385.
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2018.
Variability in functional traits mediates plant interactions along stress gradients. Journal of Ecology. 101:753-762.
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2013.
The context dependence of beneficiary feedback effects in plant facilitations. New Phytologist. 204:386-396.
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2014.
Consequences of facilitation: one plant's benefit is another plant's cost. Functional Ecology. 28:500-508.
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2014.
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2014.
Intraspecific genetic diversity and composition modify species-level diversity-productivity relationships. New Phytologist. 205:720-730.
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2015.
Direct and indirect interactions co-determine species composition in nurse plant systems. Oikos. 122:1371-1379.
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2013.
Species but not genotype diversity strongly impacts the establishment of rare colonisers. Functional Ecology. 31:1462-1470.
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2017.
Foundation species influence trait-based community assembly. New Phytologist. 196:824-834.
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2012.
Cultivar differences and impact of plant-plant competition on temporal patterns of nitrogen and biomass accumulation. Frontiers in Plant Science. 10:ArticleNo.215.
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2019.
Temporal dynamism of resource capture: a missing factor in ecology? Trends in Ecology and Evolution. 33:277-286.
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2018.
Plant-plant competition influences temporal dynamism of soil microbial enzyme activity. Soil Biology and Biochemistry. 139:ArticleNo.107615..
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2019.
Ancient class of translocated oomycete effectors targets the host nucleus. Proceedings of the National Academy of Sciences, USA. 107:17421-17426.
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2010.
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2014.
A highly mutagenised barley (cv. Golden Promise) TILLING population coupled with strategies for screening-by-sequencing. Plant Methods. 15:ArticleNo.99..
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2019.
Comparative transcriptomics in the Triticeae. BMC Genomics. 10:-285. Abstract
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2009.
International Barley Sequencing Consortium - at the threshold of efficient access to the barley genome. Plant Physiology. 149:142-147. Abstract
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2009.
A review of the role of excess soil moisture conditions in constraining farm practices under Atlantic conditions. Soil Use and Management. 28:580-589.
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2012.
Learning to live with social-ecological complexity: An interpretive analysis of learning in 11 UNESCO Biosphere Reserves. Global Environmental Change. 50:75-87.
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2018.
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2012.
The value base of water governance: a multi-disciplinary perspective. Ecological Economics. 131:241-249.
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2017.
Prospects for payments for ecosystem services in the Brazilian Pantanal: a scenario analysis. The Journal of Environment and Development. 24:26-53.
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2015.
Applying a 'Value Landscapes Approach' to conflicts in water governance: The case of the Paraguay-Parana waterway. Ecological Economics. 138:47-55.
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2017.
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2014.
Evolutionary dynamics of the cellulose synthase gene superfamily in grasses. Plant Physiology. 168:968-983.
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2015.
A molecular method to assess Phytophthora diversity in environmental samples. Journal of Microbiological Methods. 88:356-368.
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2011.
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2021.
Seeing is not everything: Exploring the landscape experiences of different publics. Landscape and Urban Planning.. 34(4):397-424.
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2009.
Planning for rural development in Scotland: A new role for local landscape designations? Planning Theory and Practice. 8:509-528.
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2007.
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2011.
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2019.
Local landscape designations in Scotland: Opportunity or barrier to effective landscape management. Landscape and Urban Planning. 81(3):257-269.
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2007.
Response of the moss Racomitrium lanuginosum to changes in sheep grazing and snow-lie due to a snow-fence. Applied Vegetation Science. 10:229-238. Abstract
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2007.
Cassava Ivorian bacilliform virus is a member of the genus Anulavirus. Archives of Virology. 159:2791-2793.
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2014.
Analysis of the distribution of marker classes in a genetic linkage map: A case study in Norway Spruce (Picea.abies Karst). Tree Genetics and Genomes. 1:93-102. Abstract
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2005.
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2014.
Identifying environmental drivers of insect phenology across space and time: Culicoides in Scotland as a case study. Bulletin of Entomological Research. 103:155-170.
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2013.
A Monte Carlo filtering application for systematic sensitivity analysis of computable general equilibrium result. Economic Systems Research. 31:404-422.
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2019.
Influence of prenatal nutrition and obesity on tissue specific fat mass and obesity-associated (FTO) gene expression. Reproduction. 139(1):265-274.
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2010.
Towards a method of evaluating social innovation in forest-dependent communities: Firsy suggestions from a a science-stakeholder collaboration. Forest Policy and Economics. 104:9-22.
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2019.
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2013.
Public and professional views on invasive non-native species - a qualitative social scientific investigation. Biological Conservation. 144:3089-3097.
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2011.
How people familiarise themselves with complex ecological concepts - anchoring of social representations of invasive non-native species. Journal of Community and Applied Social Psychology. 21:297-311.
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2011.
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2012.
Movement protein of hordeivirus interacts in vitro and in vivo with coilin, a major structural protein of Cajal bodies. Doklady Biochemistry and Biophysics. 442:57-60.
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2012.
Projections of changes in grassland soil organic carbon under climate change are relatively insensitive to methods of model initialization. European Journal of Soil Science. 64:229-238.
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2013.
Modelling soil organic carbon storage with RothC in irrigated Vertisols under cotton cropping systems in the sub-tropics. Soil and Tillage Research. 143:38-49.
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2014.
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2016.
Modelling nitrous oxide emissions from mown-grass and grain-cropping systems: Testing and sensitivity analysis of DailyDayCent using high frequency measurements. Science of the Total Environment. 572:955-977.
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2016.
Genetic increases in growth do not lead to trade-offs with ecologically important litter and fine root traits in Norway spruce. Forest Ecology and Management. 446:54-62.
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2019.
Onsite geometric calibration of RPAS mounted sensors for SfM photogrammetric geomorphological surveys. Earth Surface Processes and Landforms..
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2022.
Phenotypic correlates of hybridisation between red and sika deer (genus Cervus). Journal of Animal Ecology. 79(2):414-425.
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2010.
Variable extent of hybridization between invasive sika (Cervus nippon) and native red deer (C-elaphus) in a small geographical area. Molecular Ecology. 18(5):862-876.
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2009.
The role of free radicals in brassica-induced anaemia of sheep: an ESR spin trapping study. Asian-Australiasian Journal of Animal Sciences. 25:1404-1410.
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2012.
SerpinA3N is a novel hypothalamic gene upregulated by a high-fat diet and leptin in mice. Genes and Nutrition. 13:ArticleNo.28.
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2018.
Simulating climate change impacts on hybrid-poplar and black locust short rotation coppices. Forests. 9:ArticleNo.419.
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2018.
The dynamics of co-management and social capital in protected area management - The Cardoso Island State Park in Brazil. World Development. 67:475-489.
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2015.
Ecosystem services as an integrative framework: what is the potential? Land Use Policy. 75:549-556.
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2018.
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2014.
The impact of increased food availability on survival of a long-distance migratory bird. Ecology. 94:221-230.
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2013.
An evaluation of the fixed concentration procedure for assessment of acute inhalation toxicity. Regulatory Toxicology and Pharmacology. 94:22-32.
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2018.
The grain Hardness locus characterized in a diverse wheat panel (Triticum aestivum L.) adapted to the central part of the Fertile Crescent: genetic diversity, haplotype structure, and phylogeny. Molecular Genetics and Genomics. 291:1259-1275.
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2016.
Explaining people's perceptions of invasive alien species - A conceptual framework. Journal of Environmental Management. 229:10-26.
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2019.
Evaluating fugacity models for trace components in landfill gas. Environmental Pollution. 144:1013-1023.
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2006.
Importance of fungi in a 63 years old long-term field experiment with 20 years of maize growth. European Journal of Soil Biology. 102:ArticleNo.103264.
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2021.
High resolution mapping of Dense spike-ar (dsp.ar) to the genetic centromere of barley chromosome 7H. Theoretical and Applied Genetics. 124:373-384.
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2011.
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2017.
The nature, origin and significance of luminescent layers in the Bazhenov Shale formation of west Siberia, Russia. Marine and Petroleum Geology. 100:358-375.
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2019.
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2019.
Enhanced resistance and neutralization of defense responses by suppressors of RNA silencing. Virus Research. 130:103-109. Abstract
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2007.
Nature-based interventions for improving health and wellbeing: the purpose, the people and the outcomes. Sports. 7:ArticleNo.141.
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2019.
Selenium concentrations in national inventory soils from Scotland and Sweden and their relationships with geochemical factors. Journal of Geochemical Exploration. 121:4-14.
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2012.
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2017.
Aqua regia extractable selenium contents of some Scottish topsoils measured by ICP-MS and the relationship with mineral and organic components. Journal of the Science of Food and Agriculture. 90(6):972-980.
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2010.
Determination of N-species in soil extracts using microplate techniques. Talanta. 74:648-654.
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2008.
The effects of sheep faeces on soil solution composition. Plant and Soil. 285(1-2):135-148.
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2006.
Downward migration of radiocaesium in organic soils across a transect in Scotland. Journal of Environmental Radioactivity. 115:124-133.
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2013.
Portable X-ray fluorescence analysis of mineral and organic soils and the influence of organic matter. Journal of Geochemical Exploration. 143:31-42.
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2014.
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2008.
Auxin pulse treatment holds the potential to enhance efficiency and practicability of somatic embryogenesis in potato. Plant Cell Reports. 26:945-950. Abstract
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2007.
Linkage disequilibrium and evaluation of genome-wide association mapping models in tetraploid potato. G3: Genes, Genomes, Genetics, 8.. 8
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2018.
Linkage disequilibrium and evaluation of genome-wide association mapping models in tetraploid potato. G3: Genes, Genomes, Genetics, 8.. 8:3185-3202.
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2018.
Construction of reference chromosome-scale Pseudomolecules for potato: integrating the potato genome with genetic and physical maps. G3-Genomes Genomes Genetics. 3:2031-2047.
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2013.
Genome-wide association of yield traits in a nested association mapping population of barley reveals new gene diversity for future breeding. Authors. Journal of Experimental Botany. 69:3811-3822.
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2018.
Molecular regulation of somatic embryogenesis in potato: an auxin led perspective. Plant Molecular Biology. 68:185-201. Abstract
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2008.
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2007.
High prevalence of paratuberculosis in rabbits is associated with difficulties in controlling the disease in cattle. Veterinary Journal. 198:267-270.
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2013.
Nucleoli: Composition, function and dynamics (Review). Plant Physiology. 158:44-51.
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2012.
Regeneration of Salix arbuscula and Salix lapponum within a large mammal exclosure: the impacts of microsite and herbivory. Restoration Ecology. 18(Suppl. 1):1-9.
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2010.
Microsite affects willow sapling recovery from bank vole (Myodes glareolus) herbivory, but does not affect grazing risk. Annals of Botany. 112:731-739.
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2013.
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2019.
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2017.
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2010.
Helium: visualization of large scale plant pedigrees. BMC Bioinformatics. 15
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2014.
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2010.
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2014.
Spatiotemporal assessment and valuation of provisioning ecosystem services of Pakistan. Applied Ecology and Environmental Research. 17:6735-6759.
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2019.
Variation in acrylamide producing potential in potato: Segregation of the trait in a breeding population. Food Chemistry. 123:568-573.
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2010.
Effect of agricultural production systems on the potato metabolome. Metabolomics. 10:212-224.
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2014.
Impact of light-exposure on the metabolite balance of transgenic potato tubers with modified glycoalkaloid biosynthesis. Food Chemistry. 200:263-273.
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2016.
Metabolomic analysis of the potato tuber life cycle. Metabolomics. 6:274-291.
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2010.
The effects of stress on plant epicuticular waxes. New Phytologist. 171:469-499. Abstract
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2006.
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2006.
Metabolomics: a second-generation platform for crop and food analysis. Bioanalysis. 3:1143-1159.
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2011.
Modifying glycoalkaloid content in transgenic potato - Metabolome impacts. Food Chemistry. 187:437-443.
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2015.
Potato metabolomics by GC-MS: what are the limiting factors? Metabolomics. 3:475-488. Abstract
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2007.
Impacts on the metabolome of down-regulating polyphenol oxidase in potato tubers. Transgenic Research. 24:447-461.
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2015.
Living with dementia in rural and remote Scotland: Diverse experiences of people with dementia and their carers. Journal of Rural Studies. 22:161-176.
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2006.
Direct sequencing of Arabidopsis thaliana RNA reveals patterns of cleavage and polyadenylation. Nature Structural and Molecular Biology. 19:845-852.
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2012.
Testing the systemic induced resistance hypothesis with Austrian pine and Diplodia sapinea. Physiological and Molecular Plant Pathology. 94:118-125.
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2016.
Burkholderia symbiotica sp. Nov., isolated from root nodules of Mimosa spp. native to North East Brazil. International Journal of Systematic and Evolutionary Microbiology. 62:2272-2278.
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2012.
Burkholderia diazotrophica sp. nov., isolated from root nodules of Mimosa spp. International Journal of Systematic and Applied Microbiology. 63:435-441.
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2013.
Burkholderia dipogonis sp. Nov., isolated from root nodules of Dipogon lignosus in New Zealand and Western Australia. International Journal of Systematic and Evolutionary Microbiology. 65:4716-4723.
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2015.
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2005.
Stability and competitiveness of interviral recombinant RNAs derived from a chimeric cucumovirus. Virus Research. 140:216-221. Abstract
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2009.
The cucumovirus 2b gene drives selection of inter-viral recombinants affecting the crossover site, the acceptor RNA and the rate of selection. Nucleic Acids Research. 36:1057-1071. Abstract
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2008.
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2013.
Long-term dynamics of soil C and N in intensive rice-based cropping systems of the Indo-Gangetic Plains (IGP): A modelling approach. Ecological Modelling. 232:40-63.
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2012.
Estimating greenhouse gas abatement potential of biomass crops in Scotland under various management options. Biomass and Bioenergy. 47:211-227.
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2012.
Soil carbon balance of rice-based cropping systems of the Indo-Gangetic Plains. Geoderma. 160:143-154.
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2010.
LINTUL3, a simulation model for nitrogen-limited situations: applications to rice. European Journal of Agronomy. 32(4):255-271.
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2010.
Structural diversity and enzyme activity of volcanic soils at different stages of development and response to experimental disturbance. Soil Biology & Biochemistry. 40:2182-2185. Abstract
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2008.
Alternative splicing of mini-exons in the Arabidopsis leaf rust receptor-like kinase LRK10 genes affects subcellular localisation. Plant Cell Reports. 34:495-505.
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2015.
Revisiting the dietary niches: when is a mammalian herbivore a specialist? Integrative and Comparative Biology. 49(3):274-290.
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2009.
APETALA2 functions as a temporal factor together with BLADE-ON-PETIOLE2 and MADS29 to control flower and grain development in barley. Development. 148:ArticleNo.dev194894.
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2021.
Exploring expert opinion on the practicality and effectiveness of biosecurity measures on dairy farms in the United Kingdom using choice modelling. Journal of Dairy Science. 100:2225-2239.
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2017.
The performance of occupational closure: the case of agriculture and gender. Sociologia Ruralis. 60:40-57.
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2020.
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2018.
Why do farm accidents persist? Normalising danger on the farm within the farm family Sociology of Health and Illness. 41:470-483.
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2019.
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2019.
Dairy farmer practices and attitudes relating to grass-based, high-feed-input, and indoor production systems in Ireland. Journal of Dairy Science (Article in press).
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2021.
Enacting and resisting biosecurity citizenship: More-than-human geographies of enrolment in a disease eradication scheme in Scotland. Environment and Planning E: Nature and Space, Published online..
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2020.
Novel industry-government governance mechanisms for the eradication of bovine viral diarrhoea in the UK and Ireland. Journal of Rural Studies. 81:324-355.
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2021.
Cows eat grass, don’t they? Contrasting sociotechnical imaginaries of the role of grazing in the UK and Irish dairy sectors Journal of Rural Studies. 72:45-57.
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2019.
Trace elements in recent groundwater of an artesian flow system and comparison with snow: enrichments, depletions, and chemical evolution of the water. Journal of Environmental Monitoring, 12, 208-217..
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2009.
Role of microbial communities in conferring resistance and resilience of soil carbon and nitrogen cycling following contrasting stresses. European Journal of Soil Biology. 104:ArticleNo.103308.
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2021.
Conurbation size drives antibiotic resistance along the river. Science of the Total Environment.
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2022.
Ensuring water resource security in China; the need for advances in evidence-based policy to support sustainable management. Environmental Science and Policy. 75:65-69.
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2017.
Pantoea ananatis utilizes a type VI secretion system for pathogenesis and bacterial competition. Molecular Plant-Microbe Interactions. 28:420-431.
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2015.
Comparative genomics of type VI secretion systems in strains of Pantoea ananatis from different environments. BMC Genomics. 15:ArticleNo163.
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2014.
Individual personality and the spatial distribution of grazing animals: an example with sheep. Behavioural Processes. 82(3):319-326.
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2009.
Effects of social behaviour on the spatial distribution of sheep grazing a complex vegetation mosaic. Applied Animal Behaviour Science. 115(3-4):149-159.
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2008.
A test for measuring individual variation in how far grazing animals will move away from a social group to feed. Applied Animal Behaviour Science. 98:89-99.
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2006.
Responses of red deer (Cervus elaphus) to regular disturbance by hill walkers. European Journal of Wildlife Research. 57:817-825.
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2011.
Mapping loci that control tuber and foliar symptoms caused by PVY in autotetraploid potato (Solanum tuberosum L.). G3-Genes Genomes Genetics. 7:3587-3595.
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2017.
Agronomic biofortification of cowpea with selenium: effects of selenate and selenite application on selenium and phytate concentrations in seeds. Journal of the Science of Food and Agriculture. 99:5969-5983.
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2019.
Physiological, biochemical, and ultrastructural characterization of selenium toxicity in cowpea plants. Environmental and Experimental Botany. 150:172-182.
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2018.
Physiological, biochemical, and ultrastructural charcterization of selenium toxicity in cowpea plants. Environmental and Experimental Botany. 150:172-182.
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2018.
Brazilian species of Calliandra Benth. (tribe Ingeae) are nodulated by diverse strains of Paraburkholderia. Systematic and Applied Microbiology. 41:241-250.
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2018.
Resistance to powdery mildew in Spanish barley landraces is controlled by different sets of quantitative trait loci. Theoretical and Applied Genetics. 123:1019-1028.
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2011.
Development of specific PCR primers for identification and detection of Phytophthora capsici Leon. European Journal of Plant Pathology. 112:43-52.
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2005.
Environmental myopia: a diagnosis and a remedy. Trends in Ecology and Evolution. 25(10):556-561.
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2010.
Dual effects of plant steroidal alkaloids on Saccharomyces cerevisiae. Antimicrobial Agents and Chemotherapy. 50:2732-2740.
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2006.
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2009.
Mineralogy and biogeochemistry of potassium in the Skogaby experimental forest, southwest Sweden: pools, fluxes and K/Rb ratios in soil and biomass. Biogeochemistry. Published online..
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2016.
Potassium release and fixation as a function of fertilizer application rate and soil parent material. Geoderma. 140(1-2):188-198.
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2007.
Monitoring changes in alternative precursor messenger RNA splicing in multiple gene transcripts. The Plant Journal. 53:1035-1048. Abstract
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2008.
Alternative splicing in plants. Biochemical Society Transactions. 36:508-510.
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2008.
Mapping and expression of genes with a role in raspberry fruit ripening and softening. Theoretical and Applied Genetics. 130:557-572..
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2017.
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2014.
NO flowering. Bioessays. 27:239-241. Abstract
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2005.
Modelling nutritional interactions: from individuals to communities. Trends in Ecology and Evolution.. 25(1):53-60.
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2009.
U12-dependent intron splicing in plants. Current Topics in Microbiology and Immunology. 326:61-82.
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2008.
Regulation of plant gene expression by alternative splicing. Biochemical Society Transactions. 38:667-671.
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2010.
Incorporating variance uncertainty into a power analysis of monitoring designs. Journal of Agricultural Biological and Environmental Statistics. 12:236-249. Abstract
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2007.
Identifying when weather influences life-history traits of grazing herbivores. Journal of Animal Ecology. 76:761-770. Abstract
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2007.
Identifying when weather influences life history traits of grazing herbivores. Journal of Animal Ecology. 76(4):761-770.
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2007.
Long-term ecosystem dynamics in the Serengeti: lessons for conservation. Conservation Biology. 21(3):580-590.
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2007.
Woodland expansion in Scotland: an assessment of the opportunities and constraints using GIS. Scottish Forestry. 67
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2013.
Multiple profiling of soil microbial communities identifies potential genetic markers of metal-enriched sewage sludge. FEMS Microbiology Ecology. 65:555-564.
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2008.
Investigating microbial community structure in soils by physiological, biochemical and molecular fingerprinting methods. European Journal of Soil Science. 57:72-82.
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2006.
Biochemical and molecular characterisation of methanotrophs in soil from a pristine New Zealand beech forest. FEMS Microbiology Letters. 275(1):89-97.
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2007.
Influence of grass species and soil type on rhizosphere microbial community structure in grassland soils. Applied Soil Ecology. 36:147-155. Abstract
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2007.
Impact of biotic and abiotic interaction on soil microbial communities and functions: A field study. Applied Soil Ecology. 41(3):239-248.
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2009.
Exploring microbial diversity for biotechnology: the way forward. Trends in Biotechnology. 28(3):111-116.
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2010.