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Birch CPD.  2006.  Diagonal and orthogonal neighbours in grid-based simulations: Buffon's stick after 200 years. Ecological Modelling. 192(3-4):637-644.
Osler GHR, Korycinsk A, Cole L.  2006.  Differences in litter mass change mite assemblage structure on a deciduous forest floor. Ecography. 29(6):811-818.
Ayres E, van der Wal R, Sommerkorn M, Bardgett R.  2006.  Direct uptake of soil nitrogen by mosses. Biology Letters. 2(2):286-288.
Izumi H, Anderson IC, Alexander IJ, Killham K, Moore ERB.  2006.  Diversity and expression of nitrogenase genes (nifH) from ectomycorrhizas of Corsican pine (Pinus nigra). Environmental Microbiology. 8(12):2224-2230.
Michalet R, Brooker RW, Cavieres LA, Zikvidze Z, Lortie CJ, Pugnaire FI, Valiente-Banuet A, Callaway RM.  2006.  Do biotic interactions shape both sides of the humped-back model of species richness in plant communities? Ecology Letters. 9(7):767-773.
Rosen K, Shand CA, Haak E, Cheshire MV.  2006.  Effect of clay content and wetting and drying on radiocaesium behaviour in a peat and peaty podzol. The Science of the Total Environment. 368(2-3):795-803.
Gardner DS, Van Bon BWN, Dandrea J, Goddard PJ, May SF, Wilson V, Stephenson T, Symonds ME.  2006.  Effect of periconceptual undernutrition and gender on hypothalamic-pituitary-adrenal axis function in young adult sheep. Journal of Endocrinology. 190(2):203-212.
Wright IA, Jones JR, Davies DA, Davidson GR, Vale JE.  2006.  The effect of sward surface height on the response to mixed grazing by cattle and sheep. Animal Science. 82:271-276.
Nielsen UN, Riis T, Brix H.  2006.  The effect of weed cutting on Luronium natans. Aquatic Conservation: Marine and Freshwater Ecosystems. 16(4):409-417.
Patra AK, Abbadie L, Clays-Josserand A, Degrange V, Grayston SJ, Guillaumaud N, Loiseau P, Louault F, Mahmood S, Nazaret S et al..  2006.  Effects of management regime and plant species on the enzyme activity and genetic structure of N-fixing, denitrifying and nitrifying bacterial communities in grassland soils. Environmental Microbiology. 8(6):1005-1016.
Lea RG, Pinto de Andrade L, Rae MT, Hannah LT, Kyle CE, Murray JF, Rhind SM, Miller DW.  2006.  Effects of maternal undernutrition during early pregnancy on apoptosis regulators in the ovine fetal ovary. Reproduction. 131(1):113-124.
Shand CA, Coutts G.  2006.  The effects of sheep faeces on soil solution composition. Plant and Soil. 285(1-2):135-148.
Ghorbani J, McAllister HA, Pakeman RJ, Marrs RH, Le Duc MG.  2006.  Effects of the litter layer of Pteridium aquilinum on seed under experimental restoration. Applied Vegetation Science. 9(1):127-136.
Thwaites RH, Ashmore MR, Morton AJ, Pakeman RJ.  2006.  The effects of tropospheric ozone on the species dynamics of calcareous grassland. Environmental Pollution. 144(2):500-509.
Izumi H, Anderson IC, Alexander IJ, Killham K, Moore ERB.  2006.  Endobacteria in some ectomycorrhiza of Scots pine (Pinus sylvestris). FEMS Microbiology Ecology. 56(1):34-43.
Porteous Moore F, Barac B, Borremans B, Oeyen L, Campbell CD, Vangronsveld J, van der Lelie D, Moore ERB.  2006.  Endophytic bacterial diversity in poplar trees growing on a btex-contaminated site: the characterisation of isolates with potential to enhance phytoremediation. Systematic and Applied Microbiology. 29(7):539-556.
Harmel RD, Cooper RJ, Slade RM, Green CH, Haney RL, Arnold JG.  2006.  Error propagation in measured streamflow and water quality data for small rural watersheds. Transactions of the American Society of Agricultural Engineers. 49:689-701.
Shafi S, Sweetman A, Hough RL, Smith R, Rosevear A, Pollard SJT.  2006.  Evaluating fugacity models for trace components in landfill gas. Environmental Pollution. 144:1013-1023.
Rivington M, Matthews KB, Buchan K, Bellocchi G.  2006.  Evaluating uncertainty introduced to process-based simulation model estimates by alternative sources of meteorological data. Agricultural Systems. 88(2-3):451-461.
Evans CD, Reynolds B, Jenkins A, Helliwell RC, Curtis CJ, Goodale CL, Ferrier RC, Emmett BA, Pilkington M, Caporn SJM et al..  2006.  Evidence that soil carbon pool determines susceptibility of semi-natural ecosystems to elevated nitrogen leaching. Ecosystems. 9(3):453-462.
Pakeman RJ, Beaton JK, Thoss V, Lennon JJ, Campbell CD, White D, Iason GR.  2006.  The extended phenotype of Scots pine (Pinus sylvestris) structures the understorey assemblage. Ecography. 29(3):451-457.
Heywood E, Wright J, Wienburg CL, Black HIJ, Long SM, Osborn D, Spurgeon DJ.  2006.  Factors influencing the national distribution of polycyclic aromatic hydrocarbons and polychlorinated iphenyls in British soils. Environmental Science and Technology. 40(24):7629-7635.
Foereid B, Dawson LA, Johnson D, Rangel-Castro I.  2006.  Fate of carbon in upland grassland subjected to liming using in situ (CO2)-C-13 pulse-labelling. Plant and Soil. 287(1-2):301-311.
Littlewood NA, Pakeman RJ, Woodin SJ.  2006.  A field assessment of the success of moorland restoration in the rehabilitation of whole plant assemblages. Applied Vegetation Science. 9(2):295-306.
Vinten AJA, Donnelly S, Ball BC, Brewster J, Crawford CE, Ritchie RM, Parker JP.  2006.  A field trial to evaluate the pollution potential to ground and surface waters from woodchip corrals for overwintering livestock outdoors. Soil Use and Management. 22(1):82-94.
Genney GR, Anderson IC, Alexander IJ.  2006.  Fine scale distribution of pine ectomycorrhizas and their extramatrical mycelium. New Phytologist. 170(2):381-390.
Nijnik M, van Kooten GC.  2006.  Forestry in the Ukraine: the road ahead? Reply Forest Policy and Economics. 8(1):6-9.
Kent M, Moyeed RA, Reid CL, Pakeman RJ, Weaver R.  2006.  Geostatistics, spatial rate of change analysis and boundary detection in plant ecology and biogeography. Progress in Physical Geography. 30(2):201-231.
Erhard HW, Elston DA, Davidson GC.  2006.  Habituation and extinction in an approach/avoidance test: an example with sheep. Applied Animal Behaviour Science. 99:132-144.
Johnston S, Grune T, Bell L, Murray S, Souter D, Erwin S, Yearsley J, Gordon I, Illius A, Kyriazakis I et al..  2006.  Having it all - historical energy intakes do not generate the anticipated trade-offs in fecundity. Proceedings of the Royal Society of London, B. 273(1592):1369-1374.
Mansfield L, Burton R, Schwarz G, Brown K, Convery I.  2006.  The heft: a multifunctional management tool. The International Journal of Biodiversity Science and Management. 2:238-241.
Millett J, Hester AJ, Millard P, MacDonald AJS.  2006.  How do different competing species influence the response of Betula pubescens Ehrh. to browsing? Basic and Applied Ecology. 7(2):123-132.
Duncan AJ, Ginane C, Elston DA, Kunaver A, Gordon IJ.  2006.  How do herbivores trade off the positive and negative consequences of diet selection decisions? Animal Behaviour. 71(1):93-99.
Lin H, Bouma J, Pachepsky Y, Western A, Thompson J, van Genuchten TM, Vogel HJ, Lilly A.  2006.  Hydropedology: synergistic integration of pedology and hydrology. Water Resources Research. 42(5):W05301.
Sutherland WJ, Armstrong-Brown S, Armsworth PR, Brereton T, Brickland J, Campbell CD, Chamberlain DE, Cooke AI, Dulvy NK, Dusic NR et al..  2006.  The identification of 100 ecological questions of high policy relevance in the UK. Journal of Applied Ecology. 43(4):617-627.
Lestienne F, Thornton B, Gastal F.  2006.  Impact of defoliation intensity and frequency on N uptake and mobilisation in Lolium perenne. Journal Experimental Botany. 57(4):997-1006.
Horswell J, Weitz HJ, Percival HJ, Speir TW.  2006.  Impact of heavy metal amended sewage sludge on forest soils as assessed by bacterial and fungal biosensors. Biology and Fertility of Soils. 42(6):569-576.
Stutter MI, Deeks LK, Low D, Billett MF.  2006.  Impact of soil and groundwater heterogeneity on surface water chemistry of an upland catchment. Journal of Hydrology. 318(1-4):103-120.
McNamara NP, Chamerlain PM, Pierce TG, Sleep D, Black HIJ, Reay DS, Ineson P.  2006.  Impact of water table depth on forest soil methane turnover in laboratory soil cores deduced from natural abundance and tracer 13C stable isotope experiments. Isotopes in Environmental and Health Studies. 42(4):379-390.
Farmer JE, Paterson E, Bewley RJF, Geelhoed JS, Hillier S, Meeussen JCL, Lumsdon DG, Thomas RP, Graham MC.  2006.  The implications of integrated assessment and modelling studies for the future remediation of chromite ore processing residue disposal sites. The Science of the Total Environment. 360(1-3):90-97.
Drakare S, Lennon JL, Hillebrand H.  2006.  The imprint of the geographical, evolutionary and ecological context on species-area relationships. Ecology Letters. 9(2):215-227.
Gibbs PA, Chambers BJ, Chaudri AM, McGrath SP, Carlton-Smith CH, Bacon JR, Campbell CD, Aitken MN.  2006.  Initial results from a long-term, multi-site field study of the effects on soil fertility and microbial activity of sludge cakes containing heavy metals. Soil Use and Management. 22(1):11-21.
Dove H, Milne JA.  2006.  Intake and productivity of lambs grazing leafy or stemmy forage rape and the effect of energy or protein supplements. Australian Journal of Experimental Agriculture. 46(7):763-769.
Rivington M, Matthews KB, Bellocchi G, Buchan K, Stockle CO, Donatelli M.  2006.  An integrated assessment approach to conduct analyses of climate change impacts on whole-farm systems. Environmental Modelling Software. 22(2):202-210.
Koo BK, O'Connell PE.  2006.  An integrated modeling and multicriteria analysis approach to managing nitrate diffuse pollution: 1. Framework and methodology. The Science of the Total Environment. 359(1-3):1-16.

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The James Hutton Research Institute is the result of the merger in April 2011 of MLURI and SCRI. This merger formed a new powerhouse for research into food, land use, and climate change.