Barley genome unravelled
An international consortium of scientists has published a high resolution draft of the barley genome in the journal Nature. The research will help to produce new and better barley varieties that are vital for the beer and whisky industries. The UK team behind the research was led by Professor Robbie Waugh of Scotland’s James Hutton Institute who worked with researchers at The Genome Analysis Centre, Norwich.
Barley is the second most important crop in UK agriculture and malting barley (some 30% of the total) underpins the beer and whisky sector that is worth some £20 billion to the UK economy. The breakthrough is a critical step towards barley varieties able to cope with the demands of climate change. It should also help in the fight against cereal crop diseases that cause millions of pounds of losses annually.
Barley is the world’s fourth most important cereal crop both in terms of area of cultivation and in quantity of grain produced. In addition to whisky and beer, barley is also a major component of the animal feed that underpins the meat and dairy industries. Barley straw is a source of nutrition for ruminants, used for animal bedding in the winter, and used for frost protection in horticulture.
The barley genome is almost twice the size of that of humans and determining the sequence of its DNA has presented a major challenge. This is largely because its genome contains a large proportion of closely related sequences that are difficult to piece together into a true linear order.
By developing and applying a series of innovative strategies that allowed them to circumvent these difficulties, the International Barley Genome Sequencing Consortium (IBSC), including UK researchers in Dundee and Norwich and funded by the Biotechnology and Biological Sciences Research Council (BBSRC) and Scottish Government, has managed to construct a high resolution draft DNA sequence assembly that contains the majority of barley genes in linear order.
Their publication provides a detailed overview of the functional portions of the barley genome, revealing the order and structure of most of its 32,000 genes and a detailed analysis of where and when genes are switched on in different tissues and at different stages of development. They describe the location of dynamic regions of the genome that, for example, contain genes conferring resistance to diseases. This will provide a far better understanding of the crop’s immune system. The achievement also highlights with unprecedented detail the differences between several different barley cultivars.
Professor Waugh commented: “Access to the assembled catalogue of gene sequences will streamline efforts to improve barley production through breeding for varieties better able to withstand pests and disease and deal with adverse environmental conditions such as drought and heat stress.
“It will accelerate research in barley, and its close relative, wheat. Armed with this information breeders and scientists will be much better placed to deal with the challenge of effectively addressing the food security agenda under the constraints of a rapidly changing environment.”
Commenting on the importance of this publication, Professor Douglas Kell, BBSRC Chief Executive said: "This provides a timely and important new tool for unlocking the potential of better varieties of barley that are able to cope with environmental stresses or produce higher yields. It is an exceptionally valuable step for UK agriculture at a time when we have seen huge losses in the field due to wet weather and price-rise predictions for the consumer."
The IBSC was founded in 2006, and includes scientists from Germany, Japan, Finland, Australia, the United Kingdom, the United States and China. The genome sequence and related resources are freely accessible online.
Notes for editors
Paper: A physical, genetic and functional sequence assembly of the barley genome. The International Barley Genome Sequencing Consortium. Nature, 18 October 2012.
Barley is the second most important crop in UK agriculture. Malting barley (some 30% of the total) underpins the beer and whisky sector that is worth some £20 billion to the UK economy with almost £5 billion flowing directly to the treasury as duty. Lower quality grain and by-products of the malting process are a major component of the animal feed that underpins the meat and dairy industries and barley straw is a source of nutrition for ruminants, is used for animal bedding in the winter and for frost protection in horticulture. In social terms, barley cultivation and its use in the whisky industry indirectly supports up to 40,000 families in Scotland, largely in rural communities. Over the past 50 years barley grain yields, have more than doubled with recent analysis revealing that greater than 90% of this improvement can be attributed to genetics
The James Hutton Institute was formed in 2011 by the Macaulay Land Use Research Institute in Aberdeen and SCRI, the Scottish Crop Research Institute based in Invergowrie near Dundee, Scotland. The Institute encompasses a distinctive range of integrated, world-class strengths in land, crop, water, environmental and socio-economic science. It undertakes a wide range of research for customers including the Scottish and UK Governments, the EU and other organisations worldwide. The institute has a staff of nearly 600 and 125 PhD students.
More information from: Lorraine Wakefield, Content Manager, The James Hutton Institute, Tel: 01382 568749 (direct line) or 0844 928 5428 (switchboard) or Professor Robbie Waugh, Tel: 0844 928 5428 (switchboard).
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