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Vink, S.N., Neilson R., Robinson D. & Daniell T.J.  2014,  Temporal and land use effects on soil bacterial community structure of the machair, an EU Habitats Directive Annex I low-input agricultural system Applied Soil Ecology. 73:116-123.
Aitkenhead, M.J., Rhind S.M., Zhang Z.L., Kyle C.E. & Coull M.C.  2013,  Neural network integration of field observations for soil endocrine disruptor characterisation 468-469:240-248.
Alcon, F., Martin-Ortega J., Pedrero F., Alarcon J.J. & de Miguel M.D.  2013,  Incorporating non-market benefits of reclaimed water into cost-benefit analysis: a case study of irrigated mandarin crops in southern Spain 27:1809-1820.
Alday, J.G., Cox E.S., Pakeman R.J., Harris M.P.K., Le Duc & Marrs R.H.  2013,  Effectiveness of Calluna-heathland restoration methods after invasive plant control 54:218-226.
Alimi, N.A., Bink M.C.A.M., Dieleman J.A., Nicolai M., Wubs M., Heuvelink E., Magan J., Voorrips R.E., Jansen J., Rodrigues P.C., van der Heijden G.W.A.M., Vercauteren A., Vuylsteke M., Song Y., Glasbey C., Barocsi A., Lefebvre V. & Palloix  2013,  Genetic and QTL analyses of yield and a set of physiological traits in pepper 190:181-201.
Aitkenhead, M.J., Coull M.C., Towers W. & Hudson G.  2013,  Prediction of soil characteristics and colour using data from the National Soils Inventory of Scotland 200-201:99-107.
Alday, J.G., Cox E.S., Pakeman R.J., Harris M.P., Le Duc M.G. & Marrs R.H.  2013,  Overcoming resistance and resilience of an invaded community is necessary for effective restoration: a multi-site bracken control study 50:156-167.
Palomares-Rius, J.E., Cock P.J.A., Jones J.T., Castillo P. & Blok V.C.  2013,  Activation of hatching in diapaused and quiescent Globodera pallida eggs Parasitology. 140:445-454.
McCouch, S., Baute G.J., Bradeen J., Bramel P., Bretting P.K., Buckler E., Burke J.M., Charest D., Cloutier S., Cole G., Dempewolf H., Dingkuhn M., Feuillet C., Gepts P., Grattapaglia D., Guarino L., Jackson S., Knapp S., Langridge P., Lawton-Rauh A., Lijua Q., Lusty C., Michael T., Myles S., Naito K., Nelson R.L., Pontarollo R., Richards C.M., Rieseberg L., Ross-Ibarra J., Rounsley S., Sackville Hamilton R., Schurr U., Stein N., Tomooka N., van der Knaap E., van Tassel D., Toll J., Valls J., Varshney R.K., Ward J., Waugh R., Wenzl P. & Zamir D.  2013,  Agriculture: Feeding the future Nature. 499:23-24.
Veps, S., Koivisto H., Pekkarinen E., M P., Dobson G., McDougall G.J., Stewart D., Haapasalo A., Karjalainen R.O., Tanila H. & Hiltunen M.  2013,  Anthocyanin-enriched bilberry and blackcurrant extracts modulate amyloid precursor protein processing and alleviate behavioral abnormalities in the APP/PS1 mouse model of Alzheimer's disease Journal of Nutritional Biochemistry. 24:360-370.
Jones, H.G., Hillis R.M., Gordon S.L. & Brennan R.M.  2013,  An approach to the determination of winter chill requirements for different Ribes cultivars Plant Biology. 15:18-27.
Card, W.D., Tapper B.A., Lloyd-West C. & Wright K.M.  2013,  Assessment of fluorescein-based fluorescent dyes for tracing Neotyphodium endophytes in planta Mycologia. 105:221-229.
Mascher, M., Richmond T.A., Gerhardt D.J., Himmelback A., Clissold L., Sampath D., Ayling S., Steuernagel B., Pfeifer M., D'Ascenzo M., Akhunov E.D., Hedley P.E., Gonzales A.M., Morrell P.L., Kilian B., Blattner F.R., Scholz U., Mayer K.F.X., Flavell A.J., Muehlbauer G.J., Waugh R., Jeddeloh J.A. & Stein N.  2013,  Barley whole exome capture: a new tool for genomic research in the genus Hordeum and beyond Plant Journal. 76:494-505.
Safaiefarahani, B., Mostowfizadeh-Ghalamfarsa R. & Cooke D.E.L.  2013,  Characterisation of Phytophthora inundatas according to host range, morphological variation and multigene molecular phylogeny Phytopathologia Mediterranea. 52:46-65.
Kamei, H. & Cock P.J.A.  2013,  Computation of balanced equivalence relations and their lattice for a coupled cell network Siam Journal on Applied Dynamical Systems. 12:352-382.
Lukhovitskaya, N.I., Thaduri S., Garushyants S.K., Torrance L. & Savenkov E.I.  2013,  Deciphering the mechanism of detective interfering RNA (DI RNA) biogenesis reveals that a viral protein and the DI RNA act antagonistically in virus infection Journal of Virology. 87:6091-6103.
Atkinson, C.J., Brennan R.M. & Jones H.G.  2013,  Declining chilling and its impact on temperate perennial crops Environmental and Experimental Botany. 91:48-62.
Tilston, E.L., Halpin C. & Hopkins D.W.  2013,  Decomposition of tobacco roots with modified phenylpropanoid content by fungi with contrasting lignocellulose degradation strategies Biology and Fertility of Soils. 49:305-311. Abstract
Pritchard, L., Humphris S., Saddler G.S., Parkinson N.M., Bertrand V., Elphinstone J.G. & Toth I.K.  2013,  Detection of phytopathogens of the genus Dickeya using a PCR primer prediction pipeline for draft bacterial genome sequences Plant Pathology. 62:587-596.
Broadley, M.R., Chilimba A.D.C., Joy E., Young S.D., Black C.R., Ander E.L., Watts M.J., Hurst R., Fairweather-Tait S.J., White P.J. & Gibson R.S.  2013,  Dietary requirements for magnesium, but not calcium, are likely to be met in Malawi based on national food supply data International Journal of Vitamin and Nutrition Research. 82:192-199.
Gushchin, V.A., Lukhovitskaya N.I., Andreev D.E., Wright K.M., Taliansky M.E., Solovyev A.G., Morozov S.Y. & MacFarlane S.A.  2013,  Dynamic localization of two tobamovirus ORF6 proteins involves distinct organellar compartments Journal of General Virology. 94:230-240.
Birch, P.R.J. & Cooke D.E.L.  2013,  The early days of late blight eLife. 2:-e00954.
Steiner, H.Y., Halpin C., Jez J.M., Kough J., Parrott W., Underhill L., Weber N. & Hannah L.C.  2013,  Editor's Choice: Evaluating the potential for adverse interactions within genetically engineered breeding stacks Plant Physiology. 161:1587-1594.
Cheema, M.U.A., Rees D., Colgan R.J., Taylor M.A. & Westby A.  2013,  The effects of ethylene, 1-MCP and AVG on sprouting in sweetpotato roots Postharvest Biology and Technology. 85:89-93.
Li, Y., Cooke D.E.L., Van der Lee T. & Jacobsen E.  2013,  Efficient multiplex simple sequence repeat genotyping of the oomycete plant pathogen Phytophthora infestans Journal of Microbiological Methods. 92:316-322.
Chowdappa, P., Kumar N.B.J., Madhura S., Kumar M.S.P., Myers K.L., Fry W.E., Squires J.N. & Cooke D.E.L.  2013,  Emergence of 13_A2 blue lineage of Phytophthora infestans was responsible for severe outbreaks of late blight on tomato in South-West India Journal of Phytopathology. 161:49-58.
Wright, K.M., Chapman S.N., McGeachy K.D., Humphris S., Campbell E., Toth I.K. & Holden N.  2013,  The endophytic lifestyle of Escherichis coli 0157:h7: quantification and internal localisation in roots Phytopathology. 103:333-340.
Paterson, A., Kassim A., McCallum S., Woodhead M., Smith K., Zait D. & Graham J.  2013,  Environmental and seasonal influences on red raspberry flavour volatiles and identification of quantitative trait loci (QTL) and candidate genes Theoretical and Applied Genetics. 126:33-48.
Fyans, J.K., Bignell D., Loria R., Toth I.K. & Palmer T.  2013,  The ESX/type VII secretion system modulates development, but not virulence, of the plant pathogen Streptomyces scabies Molecular Plant Pathology. 14:119-130.
Bertier, L., Brouwer H., de Cock A.W.A.M., Cooke D.E.L., Olsson C.H.B. & Hofte M.  2013,  The expansion of Phytophthora clade 8b: the three species associated with winter grown vegetable crops Persoonia. 31:63-76.
Yu, C., Karlin D., Lu Y., Wright K.M., Chen J. & MacFarlane S.A.  2013,  Experimental and bioinformatic evidence that RLBV P4 is a movement protein of the 30K superfamily Journal of General Virology. 94:2117-2128.
King, J., Armstead I., Harper J., Ramsay L., Snape J., Waugh R., James C., Thomas A., Gasior D., Kelly R., Roberts L., Gustafson P. & King I.  2013,  Exploitation of interspecific diversity for monocot crop improvement Heredity. 110:475-483.
Fisk, S.P., Cuesta-Marcos A., Cistu L., Russell J.R., Smith K.P., Baenziger S., Bedo Z., Corey A., Filichkin T., Karsai I., Waugh R. & Hayes P.M.  2013,  FR-H3: a new QTL to assist in the development of fall-sown barley with superior low temperature tolerance Theoretical and Applied Genetics. 126:335-347.
Josuttis, M., Verrall S.R., Stewart D., Kruger E. & McDougall G.J.  2013,  Genetic and environmental effects on tannin composition in strawberry (Fragaria x ananassa) cultivars grown in different European locations Journal of Agricultural and Food Chemistry. 61:790-800.
Visioni, A., Tondelli A., Francia E., Pswarayi A., Malosetti M., Russell J., Thomas W.T.B., Waugh R., Pecchioni N., Romagosa I. & Comadran J.  2013,  Genome-wide association mapping of frost tolerance in barley (Hordeum vulgare L.) BMC Genomics. 14:-424.
Fraser, F.C., Hallett P.D., Wookey P.A., Hartley I.P. & Hopkins D.W.  2013,  How do enzymes catalysing soil nitrogen transformations respond to changing temperatures? Biology and Fertility of Soils. 49:99-103.
Stam, R., Jupe J., Howden A.J.M., Morris J.A., Boevink P., Hedley P.E. & Huitema E.  2013,  Identification and characterisation CRN effectors in Phytophthora capsici shows modularity and functional diversity PLoS One. 8:-e59517.
Zhang, R., Marshall D.F., Bryan G.J. & Hornyik C.  2013,  Identification and characterisation of miRNA transcriptome in potato by high-throughput sequencing PLoS One. 8:-e57233.
Monson, R., Burr T., Carlton T., Liu H., Hedley P.E., Toth I.K. & Salmond G.  2013,  Identification of genes in the VirR regulon of Pectobacterium atrosepticum and characterization of their roles in quorum sensing dependent virulence Environmental Microbiology. 15:687-701.
Woodhead, M., Williamson S., Smith K., McCallum S., Jennings N., Hackett C.A. & Graham J.  2013,  Identification of quantitiative trait loci for cane splitting in red raspberry (Rubus idaeus) Molecular Breeding. 31:111-122.
Naz, I., Palomares-Rius J.E., Saifullah, Blok V.C., Khan M.R. & Ali S.  2013,  In vitro and in planta nematicidal acftivity of Fumaria parviflora (Fumariacceae) against the southern root-knot nematode Meloidogyne incognita Plant Pathology. 62:943-952.
Naz, I., Palomares-Rius J.E., Saifullah, Blok V.C., Khan M.R. & Ali S.  2013,  In vitro and in planta nematicidal acftivity of Fumaria parviflora (Fumariacceae) against the southern root-knot nematode Meloidogyne incognita Plant Pathology. 62:943-952.
Prashar, A., Yildiz J., McNicol J.W., Bryan G.J. & Jones H.G.  2013,  Infra-red thermography for high throughput field phenotyping in Solanum tuberosum PLoS One. 8:-e65816.
Wishart, J., George T.S., Brown L.K., Ramsay G., Bradshaw J.E., White P.J. & Gregory P.J.  2013,  Measuring variation in potato roots in both field and glasshouse: the search for useful yield predictors and a simple screen for root traits Plant and Soil. 368:1-2.
Cubitt, M., Hedley P.E., Williamson N., Morris J., Campbell E., Toth I.K. & Salmond G.P.C.  2013,  A metabolic regulator modulates virulence and quorum sensing signal production in Pectobacterium atrosepticum Molecular Plant-Microbe Interactions. 26:356-366.
Dungait, J.A.J., Ghee C., Rowan J.S., McKenzie B.M., Hawes C., Dixon E.R., Paterson E. & Hopkins D.W.  2013,  Microbial responses to the erosional redistribution of soil organic carbon in arable fields Soil Biology and Biochemistry. 60:195-201.
Flynn, K.J., Stoecker D.K., Mitra A., Raven J.A., Glibert P.M., Hansen P.J., Graneli E. & Burkholder J.M.  2013,  Misuse of the phytoplanktonzooplankton dichotomy: the need to assign organisms as mixotrophs within plankton functional types Journal of Plankton Research. 35:3-11.
Nechwatal, J., Bakonyi J., Cacciola S.O., Cooke D.E.L., Jung T., Nagy Z.A., Vannini A., Vettraino A.M. & Brasier C.M.  2013,  The morphology, behaviour and molecular phylogeny of Phytophthora taxon Salixsoil and its redesignation as Phytophthora lacustris sp. nov. Plant Pathology. 62:355-369.
Tavares, L.R., Figueira I., McDougall G.J., Vieira H.L.A., Stewart D., Alves P.M., Ferreira R.B. & Santos C.N.  2013,  Neuroprotective effects of digested polyphenols from wild blackberry species European Journal of Nutrition. 52:225-236.

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The James Hutton Research Institute is the result of the merger in April 2011 of MLURI and SCRI. This merger formed a new powerhouse for research into food, land use, and climate change.