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Publications list

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In Press
Jouet A, Saunders DGO, McMullan M, Ward B, Furzer O, Jupe F, Cevik V, Hein I, Thilliez GJA, Holub E et al..  In Press.  Albugo candida race diversity, ploidy and host-associated microbes revealed using DNA sequence capture on diseased plants in the field. New Phytologist. Published online..
Sarkki S, Parpan T, Zahvoyska L, Voloshyna N, Derbal J, Melnykovych M, Nijnik M.  In Press.  Beyond participation! Social-ecological innovations facilitating movement from technocratic state to collaborative landscape governance in Ukraine. Landscape Ecology. Published online..
Mitchell RJ, Broome A, Beaton JK, Bellamy PE, Ellis CJ, Hester AJ, Hodgetts NG, Iason GR, Littlewood NA, Newey S et al..  In Press.  Challenges in assessing the ecological impacts of tree diseases and mitigation measures: the case of Hymenoscyphus fraxineus and Fraxinus excelsior. Baltic Forestry. 23:116-140.
Pecinka A, Chevalier C, Colas I, Kalantidis K, Varotto S, Krugman T, Michailidis C, Vallés MP, Muñoz A, Pradillo M.  In Press.  Chromatin dynamics during interphase and cell division similarities and differences between model and crop plants. Journal of Experimental Botany, Published online..
Boon PJ, Cooksley SL, Geist J, Killeen IJ, Moorkens EA, Sime I.  In Press.  Developing a standard approach for monitoring freshwater pearl mussel (Margaritifera margaritifera) populations in European rivers. Aquatic Conservation: Marine and Freshwater Ecosystems. Published online.
Vuorinen KEM, Rao SJ, Hester AJ, Speed JDM.  In Press.  Herbivory and climate as drivers of woody plant growth - do deer decrease the impacts of warming? Ecological Applications. Published online..
Cammarano D, Ceccarelli S, Grando S, Romagosa I, Benbelkacem A, Akar T, Al-Yassin A, Pecchioni N, Francia E, Ronga D.  In Press.  The impact of climate change on barley yield in the Mediterranean basin. European Journal of Agronomy. 106:1-11.
Thilliez GJA, Armstrong MR, Lim TY, Baker K, Jouet A, Ward B, van Oosterhout C, Jones JDG, Huitema E, Birch PRJ et al..  In Press.  Pathogen enrichment sequencing (PenSeq) enables population genomic studies in oomycetes. New Phytologist. Published online..
Armstrong MR, Vossen J, Lim TY, Hutten RCB, Xu J, Strachan SM, Harrower B, Champouret N, Gilroy EM, Hein I.  In Press.  Tracking disease resistance deployment in potato breeding by enrichment sequencing. New Phytologist. Published online..
Lees KJ, Artz RRE, Khomik M, Clark J, Ritson J, Hancock M, Cowei N, Quaife T.  In Press.  Using spectral indices to estimate water content and GPP in sphagnum moss and other peatland vegetation. IEEE Transactions on Geoscience and Remote Sensing. Published online..
Wilson BA, Evans MJ, Batson WG, Banks SC, Gordon IJ, Fletcher DB, Wimpenny C, Newport J, Belton E, Rypalski A et al..  2020.  Adapting reintroduction tactics in successive trials increases the likelihood of establishment for an endangered carnivore in a fenced sanctuary. PLoS ONE. 15:ArticleNo.e0234455.
Butler JRA, Bergsen AM, Bohensky E, Aitkenhead M, Hamden R, Pedde S.  2020.  Adapting scenarios for climate adaptation: Practitioners’ perspectives on a popular planning method. Environmental Science and Policy. 104:13-19.
Zhang L, Peng Y, Zhou J, George TS, Feng G.  2020.  Addition of fructose to the maize hyphosphere increases phosphatase activity by changing bacterial community structure. Soil Biology and Biochemistry. 142:ArticleNo.107724.
Gray-Wannell N, Holliman PJ, Greenwell HC, Delbos E, Hillier S.  2020.  Adsorption of phosphate by halloysite (7 angstrom) nanotubes (HNTs). Clay Minerals. 55:184-193.
Neill AJ, Tetzlaff D, Strachan NJC, Hough RL, Avery LM, Kuppel S, Maneta MP, Soulsby C.  2020.  An agent-based model that simulates the spatio-temporal dynamics of sources and transfer mechanisms contributing faecal indictor organisms to streams. Part 1: Background and model description. Journal of Environmental Management. 270:ArticleNo.110903.
Xiang Q, Zhu D, Giles M, Neilson R, Yang XR, Qiao M, Chen QL.  2020.  Agricultural activities affect the pattern of the resistome within the phyllosphere microbiome in peri-urban environments. Journal of Hazardous Materials. 382:ArticleNo.121068.
Humberto A, Wence H, Cameron C, Black HIB, Meier S, Paolini J, Tapia Y, Cornejo P.  2020.  Alteration of enzyme activities and functional diversity of a soil contaminated with copper and arsenic. Ecotoxicology and Environmental Safety. 192:ArticleNo.110264.
Negri C, Ricci M, Zilio M, D'Imporzano G, Qiao W, Dong R, Adani F.  2020.  Anaerobic digestion of food waste for bio-energy production in China and Southeast Asia: A review. Renewable and Sustainable Energy Reviews. 133:ArticleNo.110138.
Weise DR, Palarea-Albaladejo J, Johnson TJ, Jung HJ.  2020.  Analyzing wildland fire smoke emissions data using compositional data techniques. Journal of Geophysical Research Atmospheres. 125:ArticleNo.e2019JD032128.
Teodoro M, Trakal L, Gallagher BN, Simek P, Soudek P, Poherely M, Beesley L, Jacka L, Kovar M, Seyedsadr S et al..  2020.  Application of co-composted biochar significantly improved plant-growth relevant physical/chemical properties of a metal contaminated soil. Chemosphere. 242:ArticleNo.UNSP125255.
Vinten AJA, Bowden-Smith P.  2020.  An appraisal of potential for sowing of nasturtium officinale into streams to mitigate nutrient pollution in Eastern Scotland. International Journal of Environmental Research and Public Health. 17:ArticleNo.895.
Koper JEB, Kortekaas M, Loonen LMP, Huang Z, Wells JM, Gill CIR, Pourshahidi LK, McDougall G, Rowland I, Pereira-Caro G et al..  2020.  Aryl hydrocarbon receptor activation during in vitro and in vivo digestion of raw and cooked broccoli (brassica oleracea var.Italica). Food and Function. 11:4026-4037.
Guo J, Glendell M, Meersmans J, Kirkels F, Middleburg JJ, Peterse F.  2020.  Assessing branched tetraether lipids as tracers of soil organic carbon transport through the Carminowe Creek catchment (southwest England). Biogeosciences. 17:3183-3201.
Newton AC, Guy DC.  2020.  Assessing effects of crop history and soil amendments on yields of subsequent crops. Agricultural Sciences. 11:514-527.
Matos MS, Anastácio JD, Allwood JW, Carregosa D, Marques D, Sungurtas J, McDougall GJ, Menezes R, Matias AA, Stewart D et al..  2020.  Assessing the intestinal permeability and anti-inflammatory potential of sesquiterpene lactones from chicory. Nutrients. 12:ArticleNo.3547.
Cope JE, Russell J, Norton GJ, George TS, Newton AC.  2020.  Assessing the variation in manganese use efficiency traits in Scottish barley landrace bere (Hordeum vulgare L.). Annals of Botany. Published online.
Donnelly D, Helliwell R, May L, McCreadie B.  2020.  An assessment of the performance of the PLUS+ tool in supporting the evaluation of Water framework Directive compliance in Scottish standing waters. International Journal of Environmental Research and Public Health. 17:ArticleNo.391.
Melandri G, Prashar A, McCouch SR, van der Linden G, Jones HG, Kadam N, Jagadish K, Bouwmeester H, Ruyter-Spira C.  2020.  Association mapping and genetic dissection of drought-induced canopy temperature differences in rice. Journal of Experimental Botany. 71:1614-1627.
Stutter MI, Graeber D, Weigelhofer G.  2020.  Available dissolved organic carbon alters uptake and recycling of phosphorus and nitrogen from river sediments. Water. 12:ArticleNo.3321.
Portas TJ, Evans MJ, Spratt D, Vaz PK, Devlin JM, Barbosa AD, Wilson BA, Rypalski A, Wimpenny C, Fletcher D et al..  2020.  Baseline health and disease assessment of founder eastern quolls (Dasyurus Viverrinus) during a conservation translocation to mainland Australia. Journal of Wildlife Diseases. 56:547-559.
Smith WE, Newman KB, Mitchell L.  2020.  A Bayesian hierarchical model of postlarval delta smelt entrainment: integrating transport, length composition, and sampling efficiency in estimates of loss. Canadian Journal of Fisheries and Aquatic Sciences. 77:789-813.
Spezia L.  2020.  Bayesian variable selection in non-homogeneous hidden Markov models through an evolutionary Monte Carlo method. Computational Statistics and Data Analysis. 143:ArticleNo.UNSP106840.
Reis VM, Alves BJR, Hartmann A, James EK, Zilli JE.  2020.  Beneficial microorganisms in agriculture: the future of plant growth-promoting rhizobacteria. Plant and Soil. 451:1-3.
Pinker A, Argüelles L, Fischer A, Becker S.  2020.  Between straitjacket and possibility: Energy initiatives and the politics of regulation. Geoforum. 114:14-25.
Garcia G, Pais TF, Pinto P, Dobson G, McDougall GJ, Stewart D, Santos CN.  2020.  Bioaccessible raspberry extracts enriched in ellagitannins and ellagic acid derivatives have anti-neuroinflammatory properties. Antioxidants. 9:ArticleNo.970.
Ali S, Khan SJ, Allan R, Hashmi I.  2020.  Biocidal potential of electrochemically activated solutions (ECAS) against Aeromonas sp. Enterobacter sp. and Escherichia coli in tap water. Journal of Water Process Engineering. 36:ArticleNo.101328.
Menezes R, Foito A, Jardim C, Costa I, Garcia G, Rosado-Ramos R, Freitag S, Alexander CJ, Outeiro TF, Stewart D et al..  2020.  Bioprospection of natural sources of polyphenols with therapeutic potential for redox-related diseases. Antioxidants. 9:ArticleNo.789.
Barton CM, Alberti M, Ames D, Atkinson JA, Bales J, Burke E, Chen M, Diallo SY, Earn DJD, Fath B et al..  2020.  Call for transparency of COVID-19 models. Science. 368:482-483.
Zhen X, Qu M, Liu S, Duan X, Wang X, Brown LK, George TS, Zheng L, Feng G.  2020.  Carbon addition reduces labile soil phosphorus by increasing microbial biomass phosphorus in intensive agricultural systems. Soil Use and Management. 36:536-546.
Hewett CJM, Wilkinson ME, Jonczyk J, Quinn PF.  2020.  Catchment systems engineering: an holistic approach to catchment management. WIRESs Water. :ArticleNo.e1417.
Looseley ME, Griffe LL, Büttner B, Wright KM, Bayer MM, Coulter M, Thauvin JN, Middlefell-Williams J, Maluk M, Okpo A et al..  2020.  Characterisation of barley landraces from Syria and Jordan for resistance to rhynchosporium and identification of diagnostic markers for Rrs1Rh4. Theoretical and Applied Genetics. 133:1243-1264.
Bitomský M, Mládková P, Pakeman RJ, Duchoslav M.  2020.  Clade composition of a plant community indicates its phylogenetic diversity. Ecology and Evolution. 10:3747-3757.
Vinnepand M, Fischer P, Fitzsimmons K, Thornton B, Fiedler S, Vott A.  2020.  Combining inorganic and organic carbon stable isotope signatures in the Schwalbenberg Loess-palaeosol-sequence near Remagen (Middle Rhine Valley, Germany). Frontiers in Earth Science. 8:ArticleNo.276.
Revell P, Dinnie L.  2020.  Community resilience and narratives of community empowerment in Scotland. Community Development Journal. 55:218-236.
Karavidas I, NtatsiI G, Ntanasi T, Vlachos I, Tampakaki A, Iannetta PPM, Savvas D.  2020.  Comparative assessment of different crop rotation schemes for organic common bean production. Agronomy. 10:ArticleNo.1269.
Li Q, Ding GD, Yang NM, White PJ, Ye XS, Cai HM, Lu JW, Shi L, Xu FS.  2020.  Comparative genome and transcriptome analysis unravels key factors of nitrogen use efficiency in Brassica napus L. Plant Cell and Environment. 43:712-731.
Moing A, Allwood JW, Aharoni A, Baker J, Beale MH, Ben-Dor S, Biais B, Brigante F, Burger Y, Deborde C et al..  2020.  Comparative metabolomics and molecular phylogenetics of melon (Cucumis melo, Cucurbitaceae) biodiversity. Metabolites. 10
Duan YF, Duan SG, Armstrong MR, Xu JF, Zheng HJYJ, Chen XW, Hein I, Li GC, Jin LP.  2020.  Comparative transcriptome profiling reveals compatible and incompatible patterns of potato toward phytophthora infestans. G3- Genes Genomes Gemnetics. 10:623-634.

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The James Hutton Research Institute is the result of the merger in April 2011 of MLURI and SCRI. This merger formed a new powerhouse for research into food, land use, and climate change.