Publications list
Filters: First Letter Of Last Name is B [Clear All Filters]
Control of bovine tuberculosis in British livestock: there is no 'silver bullet'. Trends in Microbiology. 16:420-427. Abstract
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2008.
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2008.
Effects of variety and fertiliser nitrogen on alcohol yield, grain yield, starch and protein content, and protein composition of winter wheat. Journal of Cereal Science. 48:46-57. Abstract
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2008.
Evidence of neutral transcriptome evolution in plants. New Phytologist. 180:587-593. Abstract
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2008.
Exploiting regulatory variation to identify genes underlying quantitative resistance to the wheat stem rust pathogen Puccinia graminis f. sp. tritici in barley. Theoretical and Applied Genetics. 117:261-272. Abstract
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2008.
Expression profiling of potato germplasm differentiated in quality traits leads to the identification of candidate flavour and texture genes. Journal of Experimental Botany. 59:4219-4231. Abstract
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2008.
Gene expression profiling during asexual development of the late blight pathogen Phytophthora infestans reveals a highly dynamic transcriptome. Molecular Plant-Microbe Interaction. 21:433-447. Abstract
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2008.
Genes driving potato tuber initiation and growth: identification based on transcriptional changes using the POCI array. Functional & Integrative Genomics. 8:329-340. Abstract
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2008.
Genetic resource of European small berries according to Genberry. Sodinninkyste ir Darzininkyste. 27:371-377.
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2008.
Genome sequence of the metazoan plant-parasitic nematode Meloidogyne incognita. Nature Biotechnology. 26:909-915.
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2008.
Genomic resources and tools for gene function analysis in potato. International Journal of Plant Genomics. 2008:-216513.
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2008.
Heterogeneity in the distribution of genetically modified and conventional oilseed rape within fields and seed lots. Transgenic Research. 17:805-816. Abstract
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2008.
The high affinity K+ transporter AtHAK5 plays a physiological role in planta at very low K+ concentrations and provides a caesium uptake pathway in Arabidopsis. Journal of Experimental Botany. 59:595-607. Abstract
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2008.
Immunogenicity of proteome-determined Mycobacterium avium subsp paratuberculosis-specific proteins in sheep with Paratuberculosis. Clinical and Vaccine Immunology. 15:1824-1833.
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2008.
Insights into the evolution of CCMs from comparisons with other resource acquisition and assimilation processes. Physiologia Plantarum. 133:4-14. Abstract
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2008.
Inter-kingdom conservation of mechanism of nonense-mediated mRNA decay. EMBO Journal. 27:1585-1595.
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2008.
Intronic noncoding RNAs and splicing. Trends in Plant Science. 13:335-342. Abstract
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2008.
Investigating the behavioural and physiological indicators of neonatal survival in pigs. Theriogenology. 69:773-783. Abstract
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2008.
A latent Gaussian model for compositional data with zeros. Journal of the Royal Statistical Society Series C - Applied Statistics. 57:505-520. Abstract
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2008.
Liming upland grassland: The effects on earthworm communities and the chemical characteristics of carbon in casts. European Journal of Soil Science. 59:526-531. Abstract
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2008.
Mapping adaptation of barley to droughted environments. Euphytica. 161:35-45. Abstract
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2008.
Maternal smoking during pregnancy specifically reduces human fetal desert hedgehog gene expression during testis development. Journal of Clinical Endocrinology and Metabolism. 93:619-626. Abstract
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2008.
Mechanism of strong resistance to Potato leafroll virus infection in a clone of potato (Solanum tuberosum). Annals of Applied Biology. 152:339-347. Abstract
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2008.
Metabolic engineering of carotenoid biosynthesis in plants. Trends in Biotechnology. 26:139-145. Abstract
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2008.
Molecular dissection of sensory traits in the potato tuber. American Journal of Potato Research. 85:286-297.
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2008.
Molecular regulation of somatic embryogenesis in potato: an auxin led perspective. Plant Molecular Biology. 68:185-201. Abstract
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2008.
Monitoring changes in alternative precursor messenger RNA splicing in multiple gene transcripts. The Plant Journal. 53:1035-1048. Abstract
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2008.
A novel Phytophthora infestans haustorium-specific membrane protein is requred for infection of potato. Cellular Microbiology. 10:2271-2284. Abstract
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2008.
The NuGO proof of principle study package: a collaborative research effort of the European Nutrigenomics Organisation. Genes and Nutrition. 3:147-151.
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2008.
Oomycete RXLR effectors: delivery, functional redundancy and durable disease resistance. Current Opinion in Plant Biology. 11:373-379. Abstract
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Performance evaluation of the cell-based algorithms for domain decomposition in flow simulation. International Journal of Numerical Methods for Heat & Fluid Flow. 18:656-672. Abstract
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The Phytophthora infestans avirulence gene Avr4 encodes an RXLR-dEER effector. Molecular Plant-Microbe Interactions. 21:1460-1470. Abstract
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2008.
Phytophthora parsiana sp. nov., a new high-temperature tolerant species. Mycological Research. 112:783-794. Abstract
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2008.
A plant virus movement protein forms ringlike complexes with the major nucleolar protein, fibrillarin, in vitro. Journal of Molecular Biology. 376:932-937. Abstract
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Poly(T) variation within mitochondrial protein-coding genes in Globodera (Nematoda : Heteroderidae). Journal of Molecular Evolution. 66:197-209. Abstract
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2008.
QTL mapping of yield, agronomic and quality traits in tetraploid potato (Solanum tuberosum subsp. tuberosum). Theoretical and Applied Genetics. 116:193-211. Abstract
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2008.
A qualitative multi-attribute model for economic and ecological assessment of genetically modified crops. Ecological Modelling. 215:247-261. Abstract
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Response to comment on 'Phytoplankton calcification in a high CO2 world'. Science. 322:-1466.
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The role of the plant nucleolus in pre-mRNA processing. Current Topics in Microbiology and Immunology. 326:291-311.
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2008.
Seasonal variation in the C, N and S stable isotope composition of retail organic and conventional Irish beef. Food Chemistry. 106:1299-1305. Abstract
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Selective recovery of the virus-vector trichodorid nematode Paratrichodorus anemones from soil samples by immunomagnetic capture. European Journal of Plant Pathology. 120:85-89. Abstract
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Spatial variability of water repellency in pine forest soil. Soil and Water. 3:S123-S129. Abstract
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2008.
The stem rust resistance gene Rpg5 encodes a protein with nucleotide binding site, leucine-rich and protein kinase domains. Proceedings of the National Academy of Sciences, USA. 105:14970-14975. Abstract
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2008.
Structural diversity and enzyme activity of volcanic soils at different stages of development and response to experimental disturbance. Soil Biology & Biochemistry. 40:2182-2185. Abstract
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U12-dependent intron splicing in plants. Current Topics in Microbiology and Immunology. 326:61-82.
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2008.
Activity and structure of methanotrophic communities in landfill cover soils. Environmental Microbiology and Environmental Microbiology Reports. 1:414-423.
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2009.
Adaptation assessments for crop production in response to climate change in Cameroon. Agronomy for Sustainable Development.. 29(2):247-256.
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2009.
Analysing the development of small-scale forestry in Central and Eastern Europe. Small Scale Forestry Journal. 209(8):159-174.
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2009.
Assessing the value of Cl- and d18O data in modelling the hydrological behaviour of a small upland catchment in northeast Scotland. Hydrology Research. 39(5-6):337-358.
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2009.
Between a rock and a hard place: incompatible objectives at the heart of river basin planning? Water Science and Technology. 59(3):425-431.
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2009.
Biodiversity gains and losses: evidence for homogenisation of Scottish alpine vegetation. Biological Conservation. 142:1728-1739.
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2009.
Burkholderia spp. are the most competitive symbionts of Mimosa, particularly under N-limited conditions. Environmental Microbiology. 11(4):762-778.
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2009.
Carbon stocks in Scottish peatlands. Soil Use and Management. 25:105-112.
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2009.
ClassII peroxidase-encoding genes are present in a phylogenetically wide range of ectomycorrhizal fungi. ISME Journal. 3(12):1387-1395.
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Climate proofing Scottish River Basin Planning: A future challenge. Environmental Policy and Governance. 19(6):374-387.
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2009.
Considerations for Scottish soil monitoring in the European context. European Journal of Soil Science. 60(5):833-843.
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2009.
Crop yield model validation for Cameroon. Theoretical and Applied Climatology. 96(3-4):275-280.
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Does climate change explain the decline of a trans-Saharan Afro-Palaearctic migrant? Oecologia. 159(3):649-659.
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Don't diss integration: A comment on Ricklef's disintegrating communities. American Naturalist.. 174(6):919-927.
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2009.
The economic contribution of forest resource use to rural livelihoods in Tigray, Northern Ethiopia. Forest Policy and Economics. 11(2):123-131.
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2009.
Effect of continuous olive mill wastewater applications, in the presence and absence of N fertilization, on the structure of the soil fungal communiies. FEMS Microbiology Ecology. 70(3):388-401.
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2009.
The effect of host movement on viral transmission dynamics in a vector-borne disease system. Parasitology. 136(10):1221-1234.
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Emission trading in agriculture: a study of design options using an agent-based approach. Mitigation and Adaptation Strategies for Global Change.. 14(8):755-776.
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Environmental and spatial characterisation of bacterial community composition in soil to inform sampling strategies. Soil Biology and Biochemistry. 41(11):2292-2298.
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2009.
European bird distributions still show few climate associations. Proceedings of the National Academy of Sciences, USA. 106(16):E41-E43.
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2009.
Exposure to a complex cocktail of environmental endocrine disrupting compounds disturbs the KiSS-1/GPR54 system in ovine hypothalamus and pituitary gland. Environmental Health Perspectives. 117(10):1556-1562.
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Facilitation in the conceptual melting pot. Journal of Ecology. 97(6):1117-1120.
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2009.
Functional principal component data analysis: A new method for analysing microbial community fingerprints. Journal of Microbiological Methods. 79(1):89-95.
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2009.
Global decline in aggregated migrations of large terrestrial mammals. Endangered Species Research. 7:55-76.
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2009.
Homozygosity for a single base-pair mutation in the oocytespecific GDF9 gene results in sterility in Thoka sheep. Reproduction. 138:921-933.
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2009.
How does landscape structure influence catchment transit time across different geomorphic provinces? Hydrological Processes. 23(6):945-953.
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2009.
Identification of key soil and terrain properties that influence the spatial variability of soil moisture throughout the growing season. Soil Use and Management. 25(3):320-332.
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2009.
Influence of livestock grazing on meadow pipit foraging behaviour in upland grassland. Basic and Applied Ecology. 10:662-670.
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2009.
An inter-laboratory comparison of multi-enzyme and multiple substrate-induced respiration assays to assess method repeatability in soil monitoring. Biology and Fertility of Soils. 45(6):623-633.
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2009.
Investigating climate change impacts and adaptation options using integrated assessment methods. Aspects of Applied Biology. 93:85-91.
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2009.
Long-term trends in hydroclimatology of a Scottish mountain river. The Science of the Total Environment. 407(16):4633-4641.
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2009.
Motives behind willingness to pay for improving biodiversity in a water ecosystem: economics, ethics and social psychology. Ecological Economics. 68(4):955-964.
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2009.
A new method to identify the fluvial regimes used by spawning salmonids. Canadian Journal of Fisheries and Aquatic Sciences. 66:1404-1408.
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2009.
Pharmaceutical residues in wastewater treatment works effluents and their impact on receiving river water. Journal of Hazardous Materials.. 166(2-3):655-661.
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2009.
Quantifying terrestrial carbon stocks: examining the spatial variation in two upland areas in the UK and a comparison to mapped estimates of soil carbon. Soil Use and Management. 25(3):320-332.
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2009.
Re-powering Scotland: windfarms and the "Energy or Environment" debate. Scottish Geographical Journal. 125(2):97-126.
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2009.
Seeing is not everything: Exploring the landscape experiences of different publics. Landscape and Urban Planning.. 34(4):397-424.
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2009.
Selecting biological indicators for monitoring soils: A framework for balancing scientific and technical opinion to assist policy development. Ecological Indicators. 9(6):1212-1221.
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Spatial distribution of fungal communities in a coastal grassland soil. Soil Biology and Biochemistry. 41(2):414-416.
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Spatial modelling of nitrous oxide emissions at the national scale by upscaling using soil, climate and land use information. Global Change Biology. 15:2321-2332.
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Spatial variability in properties affecting organic horizon carbon storage in upland soils. Soil Science Society of America Journal.. 73(5):1724-1732.
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2009.
Strong impacts of belowground tree inputs on soil nematode trophic composition. Soil Biology and Biochemistry. 41(6):1060-1065.
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2009.
Temporal dynamics of marginal steppic vegetation over a 26-year period of substantial environmental change. Journal of Vegetation Science. 20:299-310.
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2009.
Topographic impacts on wheat yields under climate change: two contrasted case studies in Europe. Theoretical and Applied Climatology. Published online.
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2009.
The UK Environmental Change Network: Emerging trends in the composition of plantand animal communities and the physical environment. Biological Conservation. 142(12):2814-2832.
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Allometry and stoichiometry of unicellular, colonial and multicellular phytoplankton. New Phytologist. 181:295-309.
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2009.
Bacterial chemoattraction towards jasmonate plays a role in the entry of Dickeya dadantii through wounded tissues. Molecular Microbiology. 74:662-671.
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2009.
Biochemical properties and biodegradation of dissolved organic matter from soils. Biology and Fertility of Soils. 45:733-742. Abstract
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Biological approaches to global environmental change: mitigation and remediation. Current Biology. 19:R615-R623.
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2009.
Biological nitrification inhibition (BNI) - Is there potential for genetic interventions in Triticeae? Breeding Science. 59:529-545.
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2009.
Centrifuge modelling of climatic effects on clay embankments. Proceedings of the Institution of Civil Engineers - Engineering Sustainability. 162:91-100.
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Comparative transcriptomics in the Triticeae. BMC Genomics. 10:-285. Abstract
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2009.
Comparison of genome sequence of PVY isolates with biological properties. American Journal of Potato Research. 86:227-238.
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2009.
Cumulative impact of GM herbicide-tolerant cropping on arable plants assessed through species-based and functional taxonomies. Environmental Science and Pollution Research. 16:85-94. Abstract
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2009.
Darwin - a mission to detect and search for life on extrasolar planets. Astrobiology. 9:1-22.
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2009.
Deep rooting and drought screening of cereal crops: A novel field-based method and its application.. Field Crops Research. 112:165-171. Abstract
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2009.
Deployment of diversity for enhanced crop function. Annals of Applied Biology. 154:309-322. Abstract
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2009.
Desirable plant root traits for protecting natural and engineered slopes against landslides (Invited review). Plant and Soil. 324:1-30.
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2009.
Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics. 10:-582.
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2009.
Development and mapping of DArT markers within the Festuca - Lolium complex. BMC Genomics. 10:-473.
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2009.
The development of a PCR-based marker linked to resistance to the blackcurrant gall mite (Cecidophyopsis ribis Acari: Eriophyidae). Theoretical and Applied Genetics. 118:205-211. Abstract
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2009.
The development of immune responses in Balb/c mice following inoculation with attenuated or virulent Neospora caninum tachyzoites. Parasite Immunology. 31:392-401.
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2009.
Disentangling the impact of AM fungi versus roots on soil structure and water transport. Plant and Soil. 314:183-196. Abstract
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Earthworms bring compacted and loose soils to a similar mechanical state. Soil Biology & Biochemistry. 41:656-658. Abstract
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2009.
Ecosystem feedbacks and cascade processes: understanding their role in the responses of Arctic and alpine ecosystems to environmental change. Global Change Biology. 15:1153-1172. Abstract
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2009.
The effects of host age on follicular dendritic cell status dramatically impair scrapie agent neuroinvasion in aged mice. Journal of Immunology. 183:5199-5207.
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2009.
Estimating the annual number of breeding attempts from breeding dates using mixture models. Ecology Letters. 12:1184-1193.
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2009.
Evaluating soil stabilisation by biological processes using step-wise aggregate fractionation. Soil and Tillage Research. 102:209-215.
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2009.
Exploiting knowledge of R/Avr genes to rapidly clone a new LZ-NBS-LRR family of late blight resistance genes from potato linkage group IV. Molecular Plant-Microbe Interactions. 22:630-641.
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Functional approaches for assessing plant and invertebrate abundance patterns in arable systems. Basic and Applied Ecology. 10:34-42. Abstract
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A genetic perspective on yield plateau in potato (Review). Potato Journal (Indian). 36:79-94.
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2009.
Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans. Nature. 461:393-398.
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2009.
A graphical method for dating chicks using bivariate body measurements. Journal of Agricultural, Biological and Environmental Statistics. 14:443-451.
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2009.
Growth and photoregulation dynamics of the picoeukaryote Pelagomonas calceolata in fluctuating light. Limnology and Oceanography. 54:823-836.
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How might we model an ecosystem? Ecological Modelling. 220:1935-1949.
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Improving fruit quality in Rubus and Ribes through breeding (Invited review). Functional Plant Science and Biotechnology. 3 Special Issue 1:22-29.
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Inorganic carbon acquisition by chrysophytes. Journal of Phycology. 45:1052-1061.
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Live biospeckle laser imaging of root tissues. European Biophysics Journal. 38:679-686. Abstract
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2009.
Localization of eIF4A-III in the nucleolus and splicing speckles is an indicator of plant stress. Plant Signaling & Behavior. 4:1148-1151.
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Long-term trends in hydro-climatology of a major Scottish mountain river. Science of the Total Environment. 407:4633-4641.
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Mechanical reinforcement of soil by willow roots: impacts of root properties and root failure mechanism. Soil Science Society of America Journal. 73:1276-1285. Abstract
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Microarray comparative genomic hybridisation analysis incorporating genomic organisation, and application to enterobacterial plant pathogens. PLoS Computational Biology. 5:-e1000473.
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2009.
Model averaging to combine simulations of future global vegetation carbon stocks. Environmetrics. 20:791-811.
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2009.
Mutagenesis and functional characterisation of the RNA and protein components of the toxIN abortive infection and toxin-antitoxin locus of Erwinia. Journal of Bacteriology. 191:6029-6039.
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2009.
A new method to identify the fluvial regimes used by spawning salmonids. Canadian Journal of Fisheries and Aquatic Sciences. 66:1404-1408.
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Patterns of genetic diversity and linkage disequilibrium in a highly structured Hordeum vulgare association-mapping population for the Mediterranean basin. Theoretical and Applied Genetics. 119:175-187.
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2009.
Phagotrophy in the origins of photosynthesis in eukaryotes and as a complementary mode of nutrition in phototrophs: relation to Darwin's insectivorous plants. Journal of Experimental Botany. 60:3975-3987.
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Predicting alcohol yield from UK soft winter wheat for grain distilling: combined influence of hardness and nitrogen measurements. Journal of the Institute of Brewing. 115:183-190.
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Quantifying potato pathogen DNA in soil. Applied Soil Ecology. 41:234-238.
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2009.
Quantitative image analysis of earthworm-mediated soil displacement. Biology and Fertility of Soils. 45:821-828.
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2009.
Reconstruction of monocotyledonous proto-chromosomes reveals faster evolution in plants than in animals. Proceedings of the National Academy of Sciences, USA. 106:14908-14913.
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Relationships between yield and mineral concentrations in potato tubers. Hortscience. 44:6-11. Abstract
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2009.
Rheological stabilisation of wet soils by model root and fungal exudates depends on clay mineralogy. European Journal of Soil Science. 60:525-538. Abstract
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2009.
Rhizosphere: biophysics, biogeochemistry and ecological relevance. Plant and Soil. 321:117-152.
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Rice responses to soil management in rice-based cropping system in the semi-arid tropics of southern Lombok, Eastern Indonesia. Field Crops Research. 110:197-206. Abstract
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2009.
Root phenomics of crops - opportunities and challenges. Functional Plant Biology. 36:922-929.
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2009.
Salicylic acid confers resistance to a biotrophic rust pathogen, Puccinia substriata, in pearl millet (Pennisetum glaucum). Molecular Plant Pathology. 10:291-304.
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2009.
Sequencing the potato genome: Outline and first results to come from the elucidation of the sequence of the world's most important food crop. American Journal of Potato Research. 86:417-429.
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2009.
Shoot yield drives phosphorus use efficiency in Brassica oleracea and correlates with root architecture traits. Journal of Experimental Botany. 60:1953-1965.
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2009.
Shrub encroachment can reverse desertification in semi-arid Mediterranean grasslands. Ecology Letters. 12:930-941. Abstract
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2009.
Single seed descent as a breeding method for swedes (Brassica napus L. var. napobrassica Peterm). Euphytica. 169:387-401.
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2009.
Species' range: adaptation in space and time. American Naturalist. 174:E186-E204.
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2009.
Strawberry polyphenols are equally cytotoxic to tumourigenic and normal human breast and prostate cell lines. International Journal of Oncology. 34:777-786.
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The testing of antibodies raised against poultry red mite antigens in an in vitro feeding assay; preliminary screen for vaccine candidates. Experimental and Applied Acarology. 48:81-91.
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Towards understanding the virulence functions of RXLR effectors of the oomycete plant pathogen Phytophthora infestans (Review). Journal of Experimental Botany. 60:1133-1140.
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2009.
Transcriptional and metabolic profiles of Lolium perenne L. genotypes in response to a PEG induced water stress. Plant Biotechnology Journal. 7:719-732.
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2009.
Transcriptome analysis of potato tubers - effects of different agricultural practices. Journal of Agricultural and Food Chemistry. 57:1612-1623. Abstract
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2009.
Turnover of carbon, nitrogen and sulfur in bovine longissimus dorsi and psoas major muscles: Implications for isotopic authentication of meat. Journal of Animal Science. 87:905-913.
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The zig-zag-zig in oomycete-plant interactions. Molecular Plant Pathology. 10:547-562.
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2009.
Additive impacts of nitrogen deposition and grazing on a mountain moss-sedge heath. Botanica Helvetica.. 120(2):129-137.
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2010.
Aqua regia extractable selenium contents of some Scottish topsoils measured by ICP-MS and the relationship with mineral and organic components. Journal of the Science of Food and Agriculture. 90(6):972-980.
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2010.
Are richness patterns of common and rare species equally well explained by environmental variables? Ecography. 34(4):529-539.
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2010.
Assessing climate change causes, risks and opportunities in forestry. Outlook on Agriculture. 39(4):263-268.
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2010.
Assessing the sustainability of forest management: an application of multi-criteria decision analysis to community forests in northern Ethiopia. Journal of Environmental Management. 91:1294-1304.
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2010.
Assessing the value of high-resolution isotope tracer data in the stepwise development of a lumped conceptual rainfall-runoff model. Hydrological Processes. 24(16):2335-2348.
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2010.
An assessment of the fine sediment dynamics in an upland river system: INCA-Sed modifications and implications for fisheries. The Science of the Total Environment. 408(12):2555-2566.
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2010.
Burkholderia species are ancient symbionts of legumes. Molecular Ecology. 19(1):44-52.
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2010.
Capturing coastal geomorphological change within regional integrated assessment: an outcome-driven fuzzy logic approach. Journal of Coastal Research. 26(5):831-842.
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2010.
A comparison of the isotopic composition of lead in rainwater, surface vegetation and tree bark at the long-term monitoring site, Glensaugh, Scotland in 2007. The Science of the Total Environment. 408(17):3704-3710.
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2010.
Consequences of feasible future agricultural land use change on soil organic carbon stocks and greenhouse gas emissions in Great Britain. Soil Use and Management. 26(4):381-398.
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2010.
A contextual framework for understanding good practice in integrated catchment management. Journal of Environmental Planning and Management. 53(1):63-89.
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2010.
Degradation of metalaxyl M in contrasting soils is influenced more by differences in physicochemical characteristics than in microbial community composition after reinoculation of sterilised soils. Soil Biology and Biochemistry.. 42(7):1123-1131.
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2010.
Developing greenhouse gas marginal abatement cost curves for agricultural emissions from crops and soils in the UK. Agricultural Systems. 103(4):198-209.
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2010.
Differentiating outdoor recreation: evidence drawn from national surveys in Scotland. Journal of Policy Research in Tourism, Leisure and Events. 2(1):29-50.
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2010.
Effects of environmental pollutants on the reproduction and welfare of ruminants. Animal. 4(7):1227-1239.
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2010.