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Found 2559 results

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Cooke DEL, Cano LM, Raffaele S, Bain RA, Cooke LR, Etherington GJ, Deahl KL, Farrer RA, Gilroy EM, Goss EM et al..  2012.  Genome analyses of an aggressive and invasive lineage of the Irish potato famine pathogen. PLoS Pathogens. 8:e1002940.
Lamour KH, Mudge J, Gobena D, Hurtado-Gonzales OP, Schmutz J, Kuo A, Miller NA, Rice BJ, Raffaele S, Cano LM et al..  2012.  Genome sequencing and mapping reveal loss of heterozygosity as a mechanism for rapid adaptation in the vegetable pathogen phytophthora capsici. Molecular Plant-Microbe Interactions. 25:1350-1360.
Limpens J, Granath G, Aerts R, Heijmans MMPD, Sheppard LJ, Bragazza L, Williams BL, Rydin H, Bubier J, Moore T et al..  2012.  Glasshouse vs field experiments: do they yield ecologically similar results for assessing N impacts on peat mosses? New Phytologist. 195:408-418.
Bjorgsen Gurung A, Wymann von Dach S, Price MF, Aspinall R, Balsiger J, Baron JS, Sharma E, Greenwood G, Kohler T.  2012.  Global change and the world's mountains: research needs and emerging themes for sustainable development. A synthesis from the 2010 Perth II conference. Mountain Research and Development. 32:S47-S54.
Armitage HF, Britton AJ, van der Wal R, Woodin SJ.  2012.  Grazing exclusion and phosphorus addition as potential local management options for the restoration of alpine moss-sedge heath. Biological Conservation. 153:17-24.
Aderhold A, Husmeier D, Lennon JJ, Beale CM, Smith VA.  2012.  Hierarchical Bayesian models in ecology: Reconstructing species interaction networks from non-homogeneous species abundance data. Ecological Informatics. 11:55-64.
Benavides J, Katzer F, Maley SW, Bartley PM, Canton G, Palarea-Albaladejo J, Purslow CA, Pang Y, Rocchi MS, Chianini F et al..  2012.  High rate of transplacental infection and transmission of Neospora caninum following experimental challenge of cattle at day 210 of gestation. Veterinary Research. 43:83.
Birkel C, Soulsby C, Tetzlaff D, Dunn SM, Spezia L.  2012.  High-frequency storm event isotope sampling reveals time-variant transit time distributions and influence of diurnal cycles. Hydrological Processes. 26:308-316.
Streitner C, Köster T, Simpson CG, Shaw P, Danisman S, Brown JWS, Staiger D.  2012.  An hnRNP-like RNA-binding protein affects alternative splicing by in vivo interaction with transcripts in Arabidopsis thaliana. Nucleic Acids Research. 40:11240-11255.
Russell GC, Benavides J, Grant DM, Todd H, Thomson J, Puri V, Nath M, Haig DM.  2012.  Host gene expression changes in cattle infected with Alcelaphine herpesvirus 1. Virus Research. 169:246-254.
Saunders DGO, Breen S, Win J, Schornack S, Hein I, Bozkurt TO, Champouret N, Vleeshouwers GAA, Birch PRJ, Gilroy EM et al..  2012.  Host protein BSL1 associates with phytophthora infestans RXLR effector AVR2 and the solanum demissum immune receptor R2 to mediate disease resistance. The Plant Cell. 24:3420-3434.
Wawra S, Bain J, Durward E, de Bruijn I, Minor KL, Matena A, Lobach L, Whisson SC, Bayer P, Porter AJ et al..  2012.  Host-targeting protein 1 (SpHtp1) from the oomycete Saprolegnia parasitica translocates specifically into fish cells in a tyrosine-O-sulphate-dependent manner. Proceedings of the National Academy of Sciences. 109:2096-2101.
Brooks JS, Waylen KA, Borgerhoff Mulder M.  2012.  How national context, project design, and local community characteristics influence success in community-based conservation projects. Proceedings of the National Academy of Sciences (PNAS). 109:2165-21270.
Buckland ST, Baillie SR, Dick JM, Elston DA, Magurran AE, Scott EM, Smith RI, Somerfield PJ, Studeny AC, Watt A.  2012.  How should regional biodiversity be monitored? Environmental and Ecological Statistics. 19:601-626.
van Dijk JP, Cankar K, Hendriksen PJM, Beenen HGJ, Zhu M, Scheffer S, Shepherd LVT, Stewart D, Davies HV, Leifert C et al..  2012.  The identification and interpretation of differences in the transcriptomes of organically and conventionally grown potato tubers. Journal of Agricultural and Food Chemistry. 60:2090-2101.
Jupe F, Pritchard L, Etherington G, MacKenzie K, Cock PJA, Wright F, Sharma SK, Bolser D, Bryan GJ, Jones J et al..  2012.  Identification and localisation of the NB-LRR gene family within the potato genome. BMC Genomics. 13:1-14.
Pathak AK, Pelensky C, Boag B, Cattadori IM.  2012.  Immuno-epidemiology of chronic bacteria-helminth co-infections: observations from the field and evidence from the laboratory. International Journal of Parasitology. 42:647-655.
Fowler PA, Bellingham M, Sinclair KD, Evans NP, Pocar P, Fischer B, Schaedlich K, Schmidt JS, Amazegal MR, Bhattacharya S et al..  2012.  Impact of endocrine-disrupting compounds (EDCs) on female reproductive health. Molecular and Cellular Endocrinology. 355:231-239.
Hardstaff JL, Bulling MT, Marion G, Hutchings MR, White PCL.  2012.  Impact of external sources of infection on the dynamics of bovine tuberculosis in modelled badger populations. BMC Veterinary Research. 8:92.
Cooksley SL, Brewer MJ, Donnelly D, Spezia L, Tree A.  2012.  Impacts of artificial structures on the freshwater pearl mussel Margaritifera margaritifera in the River Dee, Scotland. Aquatic Conservation: Marine and Freshwater Ecosystems. 22:318-330.
Purse BV, Falconer D, Sullivan MJ, Carpenter S, Mellor PS, Piertney SB, Mordue AJ, Albon SD, Gunn GJ, Blackwell A.  2012.  Impacts of climate, host and landscape factors on Culicoides species in Scotland. Medical and Veterinary Entomology. 26:168-177.
O'Gorman EJ, Pichler DE, Adams G, Benstead JP, Cohen H, Craig N, Cross WF, Demars BOL, Friberg N, Gisalon GM et al..  2012.  Impacts of warming on the structure and functioning of aquatic communities: individual- to ecosystem-level responses. Chapter 2. Advances in Ecological Research. 47:81-176.
Vanga BR, Butler RC, Toth IK, Ronson CW, Pitman AR.  2012.  Inactivation of PbTopo III beta causes hyper-excision of the Pathogenicity Island HAI2 resulting in reduced virulence of Pectobacterium atrosepticum. Molecular Microbiology. 84:648-663.
Beale CM, Lennon JJ.  2012.  Incorporating uncertainty in predictive species distribution modelling. Philosophical Transactions of the Royal Society B. 367:247-258.
Zakhrabekova S, Gough SP, Braumann I, Muller AH, Lundqvist J, Ahmann K, Dockter C, Matyszczak I, Kurowska M, Druka A et al..  2012.  Induced mutations in circadian clock regulator Mat-a facilitated short-season adaptation and range extension in cultivated barley. Proceedings of the National Academy of Sciences, USA. 109:4326-4331.
Balana BB, Lago M, Baggaley N, Castellazzi M, Sample J, Stutter M, Slee B, Vinten AJA.  2012.  Integrating economic and biophysical data in assessing cost-effectiveness of buffer strip placement. Journal of Environmental Quality. 41:380-388.
Clark KE, Hartley SE, Brennan RM, MacKenzie K, Johnson SN.  2012.  Investigating preference-performance relationships in aboveground-belowground life cycles: a laboratory and field study with the vine weevil (Otiorhynchus sulcatus). Bulletin of Entomological Research. 102:63-70.
Bradshaw JE, Wilson RN.  2012.  Kale population improvement and cultivar production. Euphytica. 184:275-288.
Dinnie E, Blackstock KL, Dilley R.  2012.  Landscapes of challenge and change: contested views of the Cairngorms National Park. Landscape Research. 37:451-466.
Blackstock KL, Waylen KA, Dunglinson J, Marshall KM.  2012.  Linking process to outcomes - internal and external criteria for a stakeholder involvement in River Basin Management Planning. Ecological Economics. 77:113-122.
Brooker RW, Matesanz S, Valladares F, Klotz S.  2012.  Long-term spatial pattern change in a semi-arid plant community: The role of climate and composition. Acta Oecologia. 45:8-15.
van der Zee R, Pisa L, Andonov S, Brodschneider R, Charriere JD, Chlebo R, Coffey MF, Crailsheim K, Dahle B, Gajde A et al..  2012.  Managed honey bee colony losses in Canada, China, Europe, Israel and Turkey, for the winters of 2008-9 and 2009-10. Journal of Agricultural Research. 51:91-114.
White PJ, Broadley MR, Gregory PJ.  2012.  Managing the nutrition of plants and people. Applied and Environmental Soil Science, 2012, Article id 104826, 13pp..
Carpenter D, Sherlock E, Jones DT, Chiminoides J, Writer T, Neilson R, Boag B, Keith AM, Eggleton P.  2012.  Mapping of earthworm distribution for the British Isles and Eire highlights the under-recording of an ecologically important group. Biodiversity and Conservation. 21:475-485.
Bartley PM, Wright SE, Maley SW, Macaldowie CN, Nath M, Hamilton CM, Katzer F, Buxton D, Innes EA.  2012.  Maternal and foetal immune responses of cattle following an experimental challenge with Neospora caninum at day 70 of gestation. Veterinary Research. 43:38.
Brown EM, Gill CIR, McDougall GJ, Stewart D.  2012.  Mechanisms underlying the anti-proliferative effects of berry components in in vitro models of colon cancer. Current Pharmaceutical Biotechnology. 13:200-209.
Frank T, Rohlig RM, Davies HV, Barros E, Engel K.  2012.  Metabolite profiling of maize kernels - genetic modification versus environmental influence. Journal of Agricultural and Food Chemistry. 60:3005-3012.
Gontikaki E, Polymenakou PN, Thornton B, Narayanaswamy BE, Black K, Tselepides A, Witte U.  2012.  Microbial response to organic matter enrichment in the oligotrophic Levantine Basin (Eastern Mediterranean). Geomicrobiology Journal. 29:648-655.
Iavazzo P, Adamo P, Boni M, Hillier S, Zampella M.  2012.  Mineralogy and chemical forms of lead and zinc in abandoned mine wastes and soils: an example from Morocco. Journal of Geochemical Exploration. 113:56-67.
Bagavathiannan MV, Begg GS, Gulden RH, Van Acker RC.  2012.  Modelling the dynamics of feral alfalfa populations and its management implications. PLoS One. 7:e39440.
Tyson T, O'Mahony ZG, Skelton M, Daly MB, Jones JT, Elsworth B, Phillips M, Blaxter M, Burnell AM.  2012.  A molecular analysis of desiccation tolerance mechanisms in the anhydrobiotic nematode Panagrolaimus superbus using expressed sequenced tags. BMC Research Notes. 5:e68.
Owen G, Perks M, Benskin C, Wilkinson ME, Jonczyk J, Quinn PF.  2012.  Monitoring agricultural diffuse pollution through a dense monitoring network in the River Eden Demonstration Test Catchment, Cumbria, UK. Area. 44:443-453.
Jones MA, Williams BA, McNicol JW, Simpson CG, Brown JWS, Harmer SL.  2012.  Mutation of Arabidopsis spliceosomal timekeeper locus 1 causes circadian clock defects. The Plant Cell. 24:4066-4082.
Comadran J, Kilian B, Russell JR, Ramsay L, Stein N, Ganal M, Shaw P, Bayer M, Thomas WTB, Marshall DF et al..  2012.  Natural variation in a homolog of Antirrhinum CENTRORADIALIS contributed to spring growth habit and environmental adaptation in cultivated barley. Nature Genetics. 44:1388-1392.
Birkel C, Paroli R, Spezia L, Dunn SM, Tetzlaff D, Soulsby C.  2012.  A new approach to simulating stream isotope dynamics using Markov switching autoregressive models. Advances in Water Resources. 46:20-30.
Dietrich RC, Bengough AG, Jones HG, White PJ.  2012.  A new physical interpretation of plant root capacitance. Journal of Experimental Botany. 63:6149-6159.
Armitage HF, Britton AJ, van der Wal R, Pearce S, Thompson DBA, Woodin SJ.  2012.  Nitrogen deposition enhances moss growth but leads to an overall decline in habitat condition in mountain moss-sedge heath. Global Change Biology. 18:290-300.
Old GH, Naden PS, Granger SJ, Bilotta GS, Brazier RE, Macleod CJA, Krueger T, Bol R, Hawkins JMB, Haygarth P et al..  2012.  A novel application of natural fluorescence to understand the sources and transport pathways of pollutants from livestock farming in small headwater catchments. Science of the Total Environment. 417:169-182.
Shaw P, Brown JWS.  2012.  Nucleoli: Composition, function and dynamics (Review). Plant Physiology. 158:44-51.
Withers PJA, May L, Jarvies HP, Jordan P, Doody D, Foy RH, Bechmann M, Cooksley SL, Dils R, Deal N.  2012.  Nutrient emissions to water from septic tank systems in rural catchments: uncertainties and implications for policy. Environmental Science and Policy.. 24:71-82.
Veneklaas EJ, Lambers H, Bragg J, Finnegan PM, Lovelock CE, Plaxton WC, Price C, Scheible W, Shane MW, White PJ et al..  2012.  Opportunities for improving phosphorus-use efficiency in crop plants. New Phytologist. 195:306-320.
Dobson P, Graham J, Stewart D, Brennan RM, Hackett CA, McDougall GJ.  2012.  Over-seasons analysis of quantitative trait loci affecting phenolic content and antioxidant capacity in raspberry. Journal of Agricultural and Food Chemistry. 60:5360-5366.
Clark KE, Hartley SE, Brennan RM, MacKenzie K, Johnson SN.  2012.  Oviposition and feeding behaviour by the vine weevil Otiorhynchus sulcatus on red raspberry: effects of cultivars and plant nutritional status. Agricultural and Forest Entomology. 14:157-163.
Zetsche E, Bulling MT, Witte U.  2012.  Permeability of intertidal sandflats: Impact of temporal variability on sediment metabolism. Continental Shelf Research. 42:41-50.
Brown EM, McDougall GJ, Stewart D, Pereira Caro G, Gonzalez-Barrio R, Allsopp P, Magee P, Crozier A, Rowland I, Gill CIR.  2012.  Persistence of anticancer activity in berry extracts after simulated gastrointestinal digestion and colonic fermentation. PLoS ONE. 7:e49740.
Burthe S, Daunt F, Butler A, Elston DA, Frederiksen M, Johns D, Newell M, Thackeray SJ, Wanless S.  2012.  Phenological trends and trophic mismatch across multiple levels of a North Sea pelagic food web. International Journal of Plant Genomics. 454:119-133.
Merz U, Lees AK, Sullivan L, Schwarzel R, Hebeisen T, Kirk HG, Bouchek-Mechiche K, Hofferbert HR.  2012.  Powdery scab resistance in Solanum tuberosum: an assessment of cultivar x environment effect. Plant Pathology. 61:29-36.
Gao W, Ren T, Bengough AG, Auneau L, Watts CW, Whalley WR.  2012.  Predicting penetrometer resistance from the compression characteristic of soil. Soil Science Society of America Journal. 76:361-369.
Aitkenhead MJ, Coull MC, Towers W, Hudson G, Black HIJ.  2012.  Predicting soil chemical composition and other soil parameters from field observations using a neural network. Computers and Electronics in Agriculture. 82:108-116.
Nielsen UN, Osler GHR, Campbell CD, Burslem DFRP, van der Wal R.  2012.  Predictors of fine-scale spatial variation in soil mite and microbe community composition differ between biotic groups and habitats. Pedobiologia. 55:83-91.
Avery LM, Booth P, Campbell CD, Tompkins D, Hough RL.  2012.  Prevalence and survival of potential pathogens in source segregated green waste compost. Science of the Total Environment. 431:128-138.
Humphry RW, Bruelisauer F, McKendrick IJ, Nettleton PF, Gunn GJ.  2012.  Prevalence of antibodies to bovine viral diarrhoea virus in bulk tank milk and associated risk factors in Scottish dairy herds. Veterinary Record. 171:445..
Bragg JG, Quigg A, Raven JA, Wagner A.  2012.  Protein elemental sparing and codon usage bias are correlated among bacteria. Molecular Ecology. 21:2480-2487.
Bennett AE.  2012.  Pushing boundaries in above-belowground interactions. Functional Ecology. 26:305-306.
Foito A, Hackett CA, Byrne SL, Stewart D, Barth S.  2012.  Quantitative trait loci analysis to study the genetic regulation of non-polar metabolites in perennial ryegrass. Metabolomics. 11:412-424.
Stutter MI, Shand CA, George TS, Blackwell MSA, Bol R, Mackay RL, Richardson AE, Condron LM, Turner BL, Haygrath PM.  2012.  Recovering phosphorus from soil - A root solution? Environmental Science and Technology. 46:1977-1978.
Engelhardt S, Boevink PC, Armstrong MR, Ramos M, Hein I, Birch PRJ.  2012.  Relocalization of late blight resistance protein R3a to endosomal compartments is associated with effector recognition and required for the immune response. The Plant Cell. 24:5142-5158.
Haregeweyn N, Melese B, Tsunekawa A, Tsubo M, Meshesha D, Balana B.  2012.  Reservoir sedimentation and its mitigating strategies: a case study of Angereb reservoir (NW Ethiopia). Journal of Soil and Sediments. 12:291-305.
Cole LJ, Brocklehurst S, McCracken DI, Harrison W, Robertson D.  2012.  Riparian field margins: their potential to enhance biodiversity in intensively managed grasslands. Insect Conservation and Diversity. 5:86-94.
Hough RL, Booth P, Avery LM, Rhind SM, Crews C, Bacon J, Campbell CD, Tompkins D.  2012.  Risk assessment of the use of PAS100 green composts in sheep and cattle production in Scotland. Waste Management. 32:117-130.
Bradford RA, O'Sullivan JJ, van der Craats IM, Krywkow J, Rotko P, Bonaiuto M, Waylen K, Schelfaut K.  2012.  Risk perception - Issues for flood management in Europe. Natural Hazards and Earth System Sciences. 12:2299-2309.
Dunn SM, Darling WG, Birkel C, Bacon JR.  2012.  The role of groundwater characteristics in catchment recovery from nitrate pollution. Hydrology Research. 43:560-575.
Charkowski A, Blanco C, Condemine G, Expert D, Franza T, Hayes C, Hugouvieux-Cotte-Pattat N, Lopez Solanilla E, Low D, Moleleki L et al..  2012.  The role of secretion systems and small molecules in soft-rot enterobacteriaceae pathogenicity. Annual Review of Phytopathology. 50:425-449.
Ibarra JT, Galvez N, Gimona A, Altamirano TA, Rojas I, Hester AJ, Laker AJ, Bonacic C.  2012.  Rufous-legged owl (Strix rufipes) and Austral pygmy owl (Glaucidium nanum) stand use in a gradient of disrupted and old growth Andean temperate forests, Chile. Studies on Neotropical Fauna and Environment. 47:33-40.
Busby J, Duckett D.  2012.  Social risk amplification as an attribution: the case of zoonotic disease outbreaks. Journal of Risk Research. 15:1049-1074.
Bouma J, Broll G, Crane TA, Dewitte O, Gardi C, Schulte R, Towers W.  2012.  Soil information in support of policy making and awareness raising. Current Opinion in Environmental Sustainability. 4:1-7.
Giles M, Morley N, Baggs EM, Daniell TJ.  2012.  Soil nitrate reducing processes - drivers, mechanisms for spatial variation, and significance for nitrous oxide production. Frontiers in Microbiology. 3:407.
Valentine TA, Hallett PD, Binnie K, Young MW, Squire GR, Hawes C, Bengough AG.  2012.  Soil strength and macropore volume limit root elongation rates in many UK agricultural soils. Annals of Botany. 110:259-270.
Newton AC, Guy DC, Bengough AG, Gordon DC, McKenzie BM, Sun B, Valentine TA, Hallett PD.  2012.  Soil tillage effects on the efficacy of cultivars and their mixtures in winter barley. Field Crops Research. 128:91-100.
Poggio L, Gimona A, Brown I.  2012.  Spatio-temporal MODIS EVI gap filling under cloud cover: an example in Scotland. ISPRS Journal of Photogrammetry and Remote Sensing. 72:56-72.
Higgins JD, Perry RM, Barakate A, Ramsay L, Waugh R, Halpin C, Armstrong SJ, Franklin FCH.  2012.  Spatiotemporal asymmetry of the meiotic program underlies the predominantly distal distribution of meiotic crossovers in barley. Plant Cell. 24:4096-4109.
van der Heijden G, Song Y, Horgan G, Polder G, Dieleman A, Bink M, Palloix A, van Eeuwijk F, Glasbey C.  2012.  SPICY: towards automated phenotyping of large pepper plants in the greenhouse. Functional Plant Biology. 39:870-877.
Puttock A, Dungait JAJ, Bol R, Dixon ER, Macleod CJA, Brazier RE.  2012.  Stable carbon isotope analysis of fluvial sediment fluxes over two contrasting C4-C3 semi-arid vegetation transitions. Rapid Communications in Mass Spectrometry. 26:2386-2392.
Beattie JH, Gordon M, Duthie SJ, McNeil CJ, Horgan GW, Nixon GF, Feldmann J, Kwun I.  2012.  Suboptimal dietary zinc intake promotes vascular inflammation and atherogenesis in a mouse model of atherosclerosis. Molecular Nutrition and Food Research. 56:1097-1105.
Burgess CGS, Bartley Y, Redman E, Skuce PJ, Nath M, Whitelaw F, Tait A, Gilleard JS, Jackson F.  2012.  A survey of the trichostrongylid nematode species present on UK sheep farms and associated anthelmintic control practices. Veterinary Parasitology. 189:299-307.
Bizikova L, Nijnik M, Kluvanokova-Oravska T.  2012.  Sustaining multifunctional forestry through the developing of social capital and promoting participation: A case of multiethnic mountain communities. Small Scale Forestry Journal. 11:301-319.
Smith P, Albanito F, Bell M, Bellarby J, Blagodatskiy S, Datta A, Dondini M, Fitton N, Flynn H, Hastings A et al..  2012.  Systems approaches in global change and biogeochemistry research. Philosophical Transactions of the Royal Society. Series B. Biological Sciences.. 367:311-321.
Vanholme R, Storme V, Vanholme B, Sundin L, Christensen JH, Goeminne G, Halpin C, Rohde A, Morreel K, Boerjan W.  2012.  A systems biology view of responses to lignin biosynthesis perturbations in Arabidopsis. The Plant Cell. 24:3506-3529.
Bergfur J, Demars BOL, Stutter MI, Langan SJ, Friberg N.  2012.  The Tarland Catchment Initiative and its effect on stream water quality and macroinvertebrate indices. Journal of Environmental Quality. 41:314-321.
White PJ, Broadley MR, Thompson JA, McNicol JW, Crawley MJ, Poulton PR, Johnston AE.  2012.  Testing the distinctness of shoot ionomes of angiosperm families using the Rothamsted Park Grass Continuous Hay Experiment. New Phytologist. 196:101-109.
Tilsner J, Linnik O, Wright KM, Bell K, Roberts AG, Lacomme C, Santa Cruz S, Oparka KJ.  2012.  The TGB1 movement protein of potato virus X reorganises actin and endomembranes into the X--body, a viral replication factory. Plant Physiology. 158:1359-1370.
Clemente MR, Bustos-Sanmamed P, Loscos J, James EK, Perez-Rontome C, Navascues J, Gay M, Becana M.  2012.  Thiol synthetases of legumes: immunogold localization and differential gene regulation by phytohormones. Journal of Experimental Botany. 63:3923-3934.
Dai F, Nevo E, Wu DZ, Comadran J, Zhou MX, Qiu L, Chen ZH, Beiles A, Chen GX, Zhang GP.  2012.  Tibet is one of the centers of domestication of cultivated barley. Proceedings of the National Academy of Sciences, USA. 109:16969-16973.
Sato S, Tabata S, Hirakawa H, Asamizu E, Shirasawa K, Isobe S, Bryan G, et al..  2012.  The tomato genome sequence provides insights into fleshy fruit evolution. Nature. 485:635-641.
Mansfield J, Genin S, Magori S, Citovsky V, Sriariyanum M, Ronald P, Dow M, Verdier V, Beer SV, Machado MA et al..  2012.  Top 10 plant pathogenic bacteria in molecular plant pathology. Molecular Plant Pathology. 13:614-629.
Halliday AM, Lainson FA, Yaga R, Inglis NF, Bridgett S, Nath M, Knox DP.  2012.  Transcriptional changes in teladorsagia circumcincta upon encountering host tissue of differing immune status. Parasitology. 139:387-405.
Marquez Y, Brown JWS, Simpson CG, Barta A, Kalyna M.  2012.  Transcriptome survey reveals increased complexity of the alternative splicing landscape in Arabidopsis. Genome Research. 22:1184-1195.
Nwankno AJ, Gordon SL, Verrall SR, Brennan RM, Hancock RD.  2012.  Treatment with fungicides influences phytochemical quality of blackcurrant juice. Annals of Applied Biology. 160:86-96.
Sutherland LA, Burton RJF, Ingram J, Blackstock KL, Slee B, Gotts N.  2012.  Triggering change: towards a conceptualisation of major change processes in farm decision-making. Journal of Environmental Management. 104:142-151.
Buijs A, Hovardas T, Castro P, Devine-Wright P, Figari H, Fischer A, Mouro C, Selge S.  2012.  Understanding people's ideas on natural resource management: research on social representations of nature. Society and Natural Resources.. 25:1167-1181.
Peukert S, Bol R, Roberts W, Macleod CJA, Murray PJ, Dixon ER, Brazier RE.  2012.  Understanding spatial variability of soil properties: a key step in establishing field- to farm-scale agro-ecosystem experiments. Rapid Communications in Mass Spectrometry. 26:2413-2421.
Hoggard N, Cruickshank M, Moar KM, Bashir S, Mayer CD.  2012.  Using gene expression to predict differences in the secretome of human omental vs. subcutaneous adipose tissue. Obesity. 20:1158-1167.
Swanston JS, Smith PL, Agu RC, Brosnan JM, Bringhurst TA, Jack FR.  2012.  Variation, across environments within the UK, in grain protein and grain hardness, in wheat varieties of differing distilling quality. Field Crops Research. 127:146-152.
Baxter E, Jarvis S, Palarea-Albaladejo J, Edwards SA.  2012.  The weaker sex? The propensity for male-biased piglet mortality PLoS ONE. 7:e30318.
Brown LK, George TS, Thompson JA, Wright GM, Lyon J, Dupuy L, Hubbard SF, White PJ.  2012.  What are the implications of variation in root hair length on tolerance to phosphorus deficiency in combination with water stress in barley (Hordeum vulgare)? Annals of Botany. 110:319-328.
Gimona A, Poggio L, Brown I, Castellazzi M.  2012.  Woodland networks in a changing climate: Threats from land use change. Biological Conservation. 149:93-102.
Bingham IJ, Hoad SP, Thomas WTB, Newton AC.  2012.  Yield response to fungicide of spring barley genotypes differing in disease susceptibility and canopy structure. Field Crops Research. 139:9-19.
Dinnie E, Browne K.  2012.  You again - what are you researching this time? can you ever "leave the field"? Fieldwork in Religion. 7:164-179.
Jackson G, Macdonald LM, Brewer MJ, Dawson LA.  2012.  A conceptual framework for expert opinions in forensic geoscience. Science and Justice.
Katayama T, Wilkinson MD, Micklem G, Kawashima S, Yamaguchi A, Nakao M, Yamamoto Y, Okamoto S, Oouchida K, Hong-Woo C et al..  2013.  The 3rd DBCLS BioHackathon: improving life science data integration with Semantic Web technologies. Journal of Biomedical Semantics. 4
Palomares-Rius JE, Jones JT, Cock PJ, Castillo P, Blok VC.  2013.  Activation of hatching in diapaused and quiescent Globodera pallida. Parasitology. 140:445-454.
Pettorelli N, Evans DM, Garner TWJ, Katzner T, Gompper ME, Altwegg R, Branch TA, Johnson JA, Acevedo-Whitehouse K, DaVolls L et al..  2013.  Addressing gender imbalances in animal conservation. Animal Conservation. 16:131-133.
McCouch S, Baute GJ, Bradeen J, Bramel P, Bretting PK, Buckler E, Burke JM, Charest D, Cloutier S, Cole G et al..  2013.  Agriculture: Feeding the future. Nature. 499:23-24.
Butterfield BJ, Cavieres LA, Callaway RM, Cook BJ, Kikvidze Z, Lortie CJ, Michalet R, Pugnaire FI, Schoeb C, Xiao S et al..  2013.  Alpine cushion plants inhibit the loss of phylogenetic diversity in severe environments. Ecology Letters. 16:478-486.
Staiger D, Brown JWS.  2013.  Alternative splicing at the intersection of biological timing, development, and stress responses. The Plant cell. 25:3640-3656.
Mascher M, Muehlbauer GJ, Rokhsar DS, Chapman J, Schmutz J, Barry K, Munoz-Amatriain M, Close TJ, Wise RP, Schulman AH et al..  2013.  Anchoring and ordering NGS contig assemblies by population sequencing (POPSEQ). Plant Journal. 76:718-727.
Reed MS, Hubacek K, Bonn A, Burt TP, Holden J, Stringer LC, Beharry-Borg N, Buckmaster S, Chapman D, Chapman PJ et al..  2013.  Anticipating and managing future trade-offs and complementarities between ecosystem services. Ecology and Society, 18, 5..
Troldborg M, Aalders I, Towers W, Hallett PD, McKenzie BM, Bengough AG, Lilly A, Ball BC, Hough RL.  2013.  Application of Bayesian Belief Networks to quantify and map areas at risk to soil threats: using soil compaction as an example. Soil Tillage and Research. 132:56-68.
Jones HG, Hillis RM, Gordon SL, Brennan RM.  2013.  An approach to the determination of winter chill requirements for different Ribes cultivars. Plant Biology. 15:18-27.
Bennett AE, Daniell TJ, Opik M, Davison J, Moora M, Zobel M, Selosse MA, Evans D.  2013.  Arbuscular mycorrhizal fungal networks vary throughout the growing season and between successional stages. PLoS ONE. 8:e83241.
Balana BB, Catacutan D, Makela M.  2013.  Assessing the willingness to pay for reliable domestic water supply via catchment management: results from a contingent valuation survey in Nairobi City, Kenya. Journal of Environmental Planning and Management. 56:1511-1531.
Mascher M, Richmond TA, Gerhardt DJ, Himmelbach A, Clissold L, Sampath D, Ayling S, Steuernagel B, Pfeifer M, D'Ascenzo M et al..  2013.  Barley whole exome capture: a tool for genomic research in the genus Hordeum and beyond. Plant Journal. 76:494-505.
Seim GL, Ahn CI, Bodis MS, Luwedde F, Miller DD, Hillier S, Tako E, Glahn RP, Young SL.  2013.  Bioavailability of iron in geophagic earths and clay minerals, and their effect on dietary iron absorption using an in vitro digestion/Caco-2 cell model. Food and Function. 4:1263-1270.
Beesley L, Marmiroli M, Pagaono L, Pigoni V, Fellet G, Fresno T, Vamerali T, Bandiera M, Marmiroli N.  2013.  Biochar addition to an arsenic contaminated soil increases arsenic concentrations in the pore water but reduces uptake to tomato plants (Solanum lycopersicum L.). Science of the Total Environment. 454-455:598-603.
Loades KW, Bengough AG, Bransby MF, Hallett PD.  2013.  Biomechanics of nodal, seminal and lateral roots of barley: effects of diameter, waterlogging and mechanical impedance. Plant and Soil. 370:407-418.
Hallett PD, Karim KH, Bengough AG, Otten W.  2013.  Biophysics of the Vadose Zone: from reality to model systems and back again. Vadose Zone Journal. 12
Steele K, Dickin E, Keerio MD, Samad S, Kambona C, Brook R, Thomas W, Frost G.  2013.  Breeding low-glycemic index barley for functional food. Field Crops Research. 154:31-39.
Sheu SY, Chou JH, Bontemps C, Elliott GN, Gross E, dos Reis Jr FB, Melkonian RJ, Moulin L, James EK, Sprent JI et al..  2013.  Burkholderia diazotrophica sp. nov., isolated from root nodules of Mimosa spp. International Journal of Systematic and Applied Microbiology. 63:435-441.
Bournaud C, de Faria S, Santos JMF, Tisseyre P, Silva M, Chaintreuil C, Gross E, James EK, Prin Y, Moulin L.  2013.  Burkholderia species are the most common and preferred nodulating symbionts of the Piptadenia group (Tribe Mimoseae). PLoS ONE. 8:e63478.
Vanholme R, Cesarino I, Rataj K, Xiao Y, Sundin L, Goeminne G, Kim H, Cross J, Morreel K, Araujo P et al..  2013.  Caffeoyl Shikimate Esterase (CSE) is an enzyme in the lignin biosynthetic pathway. Science. 341:1103-1106.
Dietrich RC, Bengough AG, Jones HG, White PJ.  2013.  Can root electrical capacitance be used to predict root mass in soil? Annals of Botany. 112:457-464.
Katzner T, Johnson JA, Evans DM, Garner TWJ, Gompper ME, Altwegg R, Branch TA, Gordon IJ, Pettorelli N.  2013.  Challenges and opportunities for animal conservation from renewable energy development. Animal Conservation. 16:367-369.
Puttock A, Macleod CJA, Bol R, Sessford P, Dungait J, Brazier RE.  2013.  Changes in ecosystem structure, function and hydrological connectivity control water, soil and carbon losses in semi-arid grass to woody vegetation transitions. Earth Surface Processes and Landforms. 38:1602-1611.
Rivington M, Matthews KB, Buchan K, Miller DG, Bellocchi G, Russell G.  2013.  Climate change impacts and adaptation scope for agriculture indicated by agro-meteorological metrics. Agricultural Systems. 114:15-31.
Dinnie E, Brown KM, Morris S.  2013.  Community, cooperation and conflict: negotiating the social wellbeing benefits of urban greenspace experience. Landscape and Urban Planning. 112:1-9.
Kenyon F, McBean D, Greer AW, Burgess CGS, Morrison AA, Bartley DJ, Bartley Y, Devin L, Nath M, Jackson F.  2013.  A comparative study of the effects of four treatment regimes on ivermectin efficacy, body weight and pasture contamination in lambs naturally infected with gastrointestinal nematodes in Scotland. International Journal for Parasitology - Drugs and Drug Resistance. 3:77-84.
Farruga K, Brandey K, Dawson LA, NicDaeid NN.  2013.  A comparison of enhancement techniques for footwear impressions on dark and patterned fabrics. Journal of Forensic Sciences. 58:1472-1485.
Chapman SJ, Bell JS, Campbell CD, Hudson G, Lilly A, Nolan AJ, Robertson AHJ, Potts JM, Towers W.  2013.  Comparison of soil carbon stocks in Scottish soils between 1978 and 2009. European Journal of Soil Science. 64:455-465.
Rhind SM, Kyle CE, Kerr C, Osprey M, Zhang ZL, Duff EI, Lilly A, Nolan A, Hudson G, Towers W et al..  2013.  Concentrations and geographic distribution of selected organic pollutants in Scottish surface soils. Environmental Pollution. 182:15-27.
Brooker RW, Kikvidze Z, Kunstler G, Liancourt P, Seifan M.  2013.  The concept and measurement of importance: a comment on Rees et al. 2012. Journal of Ecology. 101:1369-13789.
Sutherland LA, Mills J, Ingram J, Burton RJF, Dwyer J, Blackstock KL.  2013.  Considering the source: Commercialisation and trust in agri-environmental information and advisory services in England. Journal of Environmental Management. 118:96-205.
Sharma SK, Bolser D, de Boer J, Sonderkaer M, Amoros W, Carboni MF, D'Ambrosio JM, de la Cruz G, Di Genova A, Douches DS et al..  2013.  Construction of reference chromosome-scale Pseudomolecules for potato: integrating the potato genome with genetic and physical maps. G3-Genomes Genomes Genetics. 3:2031-2047.
Gregory PJ, Atkinson CJ, Bengough AG, Else MA, Fernandez-Fernandez F, Harrison RJ, Schmidt S.  2013.  Contributions of roots and rootstocks to sustainable, intensified crop production. Journal of Experimental Botany. 64:1209-1222.
Whitehead PG, Crossman J, Balana BB, Futter MN, Comber S, Jin L, Skuras D, Wade AJ, Bowes MJ, Read DS.  2013.  A cost-effectiveness analysis of water security and water quality: impacts of climate and land-use change on the River Thames system. Philosophical Transactions of the Royal Society, Series A. 371:201204B.
Reynolds B, Chamberlain PM, Poskitt J, Woods C, Scott WA, Rowe EC, Robinson DA, Frogbrook ZL, Keith AM, Henrys PA et al..  2013.  Countryside survey: National "Soil Change" 1978-2007 for topsoils in Great Britain - acidity, carbon, and total nitrogen status. Vadose Zone Journal. 12
Atkinson CJ, Brennan RM, Jones HG.  2013.  Declining chilling and its impact on temperate perennial crops. Environmental and Experimental Botany. 91:48-62.
Pritchard L, Humphris S, Saddler GS, Parkinson NM, Bertrand V, Elphinstone JG, Toth IK.  2013.  Detection of phytopathogens of the genus Dickeya using a PCR primer prediction pipeline for draft bacterial genome sequences. Plant Pathology. 62:587-596.
Bartley PM, Katzer F, Rocchi MS, Maley SW, Benavides J, Nath M, Pang Y, Canton G, Thomson J, Chianini F et al..  2013.  Development of maternal and foetal immune responses in cattle following experimental challenge with Neospora caninum at day 210 of gestation. Veterinary Research. 44
Rushworth AM, Bowman AW, Brewer MJ, Langan SJ.  2013.  Distributed lag models for hydrological data. Biometrics. 69:537-544.
Pritchard L, Humphris S, Baeyen S, Maes M, Van Vaerenbergh J, Elphinstone J, Saddler G, Toth IK.  2013.  Draft genome sequences of four Dickeya dianthicola and four Dickeya solani strains. Genome Announcements. 1:e0087-12.
Bennett AE, Macrae A, Moore BD, Caul S, Johnson SN.  2013.  Early root herbivory impairs arbuscular mycorrhizal fungal colonization and shifts defence allocation in Plantago lanceolata. PLoS ONE. 8:e66053.
Andow DA, Lovei GL, Arpaia S, Wilson L, Fontes EMG, Hilbeck A, Lang A, Van Tuat N, Pires CSS, Sujii ER et al..  2013.  An ecologically-based method for selecting ecological indicators for assessing risks to biological diversity from genetically-engineered plants. Journal of Biosafety. 22:141-156.
Cerekovic N, Pagter M, Kristensen HL, Pedersen HL, Brennan R, Petersen KK.  2013.  Effects of drought stress during flowering of two pot-grown blackcurrant (Ribes nigrum L.) cultivars. Scientia Horticulturae. 162:365-373.
Burthe S, Newell MA, Goodman G, Butler A, Bregnballe T, Harris E, Wanless S, Cunningham EJA, Daunt F.  2013.  Endoscopy as a novel method for assessing endoparasite burdens in free-ranging European shags (Phalacrocorax aristotelis). Methods in Ecology and Evolution. 4:207-216.
Cameron DR, Van Oijen M, Werner C, Butterbach-Bahl K, Grote R, Haas E, Heuvelink GBM, Kiese R, Kros J, Kuhnert M et al..  2013.  Environmental change impacts on the C- and N-cycle of European forests: a model comparison study. Biogeosciences. 10:1751-1773.
James MC, Bowman AS, Forbes KJ, Lewis F, McLeod JE, Gilbert L.  2013.  Environmental determinants of Ixodes ricinus ticks and the incidence of Borrelia burgdorferi sensu lato, the agent of Lyme borreliosis, in Scotland. Parasitology. 140:237-246.
Ghimire SK, Higaki D, Bhattarai TP.  2013.  Estimation of soil erosion rates and eroded sediment in a degraded catchment of Siwalik Hills, Nepal. Land. 2:370-391.
Fyans JK, Bignell D, Loria R, Toth IK, Palmer T.  2013.  The ESX/type VII secretion system modulates development, but not virulence, of the plant pathogen Streptomyces scabies. Molecular Plant Pathology. 14:119-130.
Cornulier T, Yoccoz NG, Bretagnolle V, Brommer JE, Butet A, Ecke F, Elston DA, Framstad E, Henttonen H, Hornfeldt B et al..  2013.  Europe-wide dampening of population cycles in keystone herbivores. Science. 340:63-66.
Espinosa M, Psaltopoulos D, Santini F, Phimister E, Roberts D, Mary S, Ratinger T, Skuras D, Balamou E, Cardenette M et al..  2013.  Ex-ante analysis of the regional impacts of the Common Agricultural Policy: a rural-urban recursive dynamic CGE model approach. European Planning Studies. Published online..
Bertier L, Brouwer H, de Cock AWAM, Cooke DEL, Olsson CHB, Hofte M.  2013.  The expansion of Phytophthora clade 8b: three new species associated with winter grown vegetable crops. Persoonia. 31:63-76.
Bellingham M, Amezaga MR, Mandon-Pepin B, Speers CJB, Kyle CE, Evans NP, Sharpe RM, Cotinot C, Rhind SM, Fowler PA.  2013.  Exposure to chemical cocktails before or after conception - the effect of timing on ovarian function. Molecular and Cellular Endocrinology. 376:156-172.
Tandy S, Brittain S, Grail BM, McLeod CW, Paterson E, Tomos AD.  2013.  Fine scale measurement and mapping of uranium in soil solution in soil and plant-soil microcosms, with special reference to depleted uranium. Plant and Soil. 368:471-482.
Yawson DO, Mulholland B, Ball T, Mohan S, White PJ.  2013.  Food security in a water-scarce world: making virtual water compatible with crop water use and food trade. Scientific Papers Series: Management, Economic Engineering in Agriculture and Rural Development. 13:431-443.
Galvez N, Hernandez F, Laker J, Gilabert H, Petitpas R, Bonacic C, Gimona A, Hester AJ, Macdonald DW.  2013.  Forest cover outside protected areas plays an important role in the conservation of the Vulnerable guina Leopardus guigna. Oryx. 47:251-258.
Fisk SP, Cuestas-Marcos A, Cistue L, Russell J, Smith KP, Baenziger S, Bedo Z, Corey A, Filichkin T, Karsai I et al..  2013.  FR-H3: a new QTL to assist in the development of fall-sown barley with superior low temperature tolerance. Theoretical and Applied Genetics. 126:335-347.
Alimi NA, Bink MCAM, Dieleman JA, Nicolai M, Wubs M, Heuvelink E, Magan J, Voorrips RE, Jansen J, Rodrigues PC et al..  2013.  Genetic and QTL analyses of yield and a set of physiological traits in pepper. Euphytica. 190:181-201.
Bull TJ, Schock A, Sharp JM, Greene M, McKendrick IJ, Sales J, Linedale R, Stevenson K.  2013.  Genomic variations associated with attenuation in Mycobacterium avium subsp paratuberculosis vaccine strains. BMC Microbiology, 13, Article No.11..
Birch PRJ, Cooke DEL.  2013.  Genomics: the early days of late blight. eLife. 2:e00954.
Jacobs AAA, Scheper JA, Benvenutti MA, Gordon IJ, Poppi DP, Elgersma A.  2013.  Gradients in fracture force and grazing resistance across canopy layers in seven tropical grass species. Grass and Forage Science. 68:278-287.
Roe J, Ward Thompson C, Aspinall P, Brewer MJ, Duff EI, Miller DR, Mitchell R, Clow A.  2013.  Green space and stress: evidence from cortisol measures in deprived urban communities. International Journal of Environmental Research and Public Health.
Shi L, Shi TX, Broadley MR, White PJ, Long Y, Meng JL, Xu FS, Hammond JP.  2013.  High-throughput root phenotyping screens identify genetic loci associated with root architectural traits in Brassica napus under contrasting phosphate availabilities. Annals of Botany. 112:381-389.
Hu D, Clift PD, Boning P, Hannigan R, Hillier S, Blusztajn J, Wan S, Fuller DQ.  2013.  Holocene evolution in weathering and erosion patterns in the Pearl River delta. Geochemistry Geophysics Geosystems. 14:2349-2368.
Orrell P, Bennett AE.  2013.  How can we exploit above-belowground interactions to assist in addressing the challenges of food security? Frontiers in Plant Science: Plant-Microbe Interactions. 4
Balana BB, Dunn SM.  2013.  How effective are agricultural management measures at improving water quality? Intersezioni - Online magazine of the Agronomist Professional Association of Milano, 40, 18 December 2013..
Babikova Z, Johnson D, Bruce TJA, Pickett JA, Gilbert L.  2013.  How rapid is aphid-induced signal transfer between plants via common mycelial networks? Communicative and Integrative Biology. 6:e25904.
Stam R, Jupe J, Howden AJM, Morris JA, Boevink PC, Hedley PE, Huitema E.  2013.  Identification and characterisation CRN effectors in Phytophthora capsici shows modularity and functional diversity. PLoS ONE. 8:e59517.
Zhang R, Marshall DF, Bryan GJ, Hornyik C.  2013.  Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing. PLoS ONE. 8:e57233.
Monson R, Burr T, Carlton T, Liu H, Hedley P, Toth IK, Salmond GPC.  2013.  Identification of genes in the VirR regulon of Pectobacterium atrosepticum and characterization of their roles in quorum sensing-dependent virulence. Environmental Microbiology. 15:687-701.
Dincheva I, Badjakov I, Kondakova V, Dobson P, McDougall G, Stewart D.  2013.  Identification of the phenolic components in Bulgarian raspberry cultivars by LC-ESI-MSn. International Journal of Agricultural Science Research. 3:127-137.
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Seward AM, Beale CM, Gilbert L, Jones TH, Thomas RJ.  2013.  The impact of increased food availability on survival of a long-distance migratory bird. Ecology. 94:221-230.

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The James Hutton Research Institute is the result of the merger in April 2011 of MLURI and SCRI. This merger formed a new powerhouse for research into food, land use, and climate change.