Publications list
Filters: First Letter Of Last Name is B [Clear All Filters]
Genome analyses of an aggressive and invasive lineage of the Irish potato famine pathogen. PLoS Pathogens. 8:e1002940.
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2012.
Genome sequencing and mapping reveal loss of heterozygosity as a mechanism for rapid adaptation in the vegetable pathogen phytophthora capsici. Molecular Plant-Microbe Interactions. 25:1350-1360.
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2012.
Glasshouse vs field experiments: do they yield ecologically similar results for assessing N impacts on peat mosses? New Phytologist. 195:408-418.
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2012.
Global change and the world's mountains: research needs and emerging themes for sustainable development. A synthesis from the 2010 Perth II conference. Mountain Research and Development. 32:S47-S54.
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2012.
Grazing exclusion and phosphorus addition as potential local management options for the restoration of alpine moss-sedge heath. Biological Conservation. 153:17-24.
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2012.
Hierarchical Bayesian models in ecology: Reconstructing species interaction networks from non-homogeneous species abundance data. Ecological Informatics. 11:55-64.
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2012.
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2012.
High-frequency storm event isotope sampling reveals time-variant transit time distributions and influence of diurnal cycles. Hydrological Processes. 26:308-316.
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2012.
An hnRNP-like RNA-binding protein affects alternative splicing by in vivo interaction with transcripts in Arabidopsis thaliana. Nucleic Acids Research. 40:11240-11255.
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2012.
Host gene expression changes in cattle infected with Alcelaphine herpesvirus 1. Virus Research. 169:246-254.
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2012.
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2012.
Host-targeting protein 1 (SpHtp1) from the oomycete Saprolegnia parasitica translocates specifically into fish cells in a tyrosine-O-sulphate-dependent manner. Proceedings of the National Academy of Sciences. 109:2096-2101.
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2012.
How national context, project design, and local community characteristics influence success in community-based conservation projects. Proceedings of the National Academy of Sciences (PNAS). 109:2165-21270.
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2012.
How should regional biodiversity be monitored? Environmental and Ecological Statistics. 19:601-626.
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2012.
The identification and interpretation of differences in the transcriptomes of organically and conventionally grown potato tubers. Journal of Agricultural and Food Chemistry. 60:2090-2101.
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2012.
Identification and localisation of the NB-LRR gene family within the potato genome. BMC Genomics. 13:1-14.
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2012.
Immuno-epidemiology of chronic bacteria-helminth co-infections: observations from the field and evidence from the laboratory. International Journal of Parasitology. 42:647-655.
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2012.
Impact of endocrine-disrupting compounds (EDCs) on female reproductive health. Molecular and Cellular Endocrinology. 355:231-239.
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2012.
Impact of external sources of infection on the dynamics of bovine tuberculosis in modelled badger populations. BMC Veterinary Research. 8:92.
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2012.
Impacts of artificial structures on the freshwater pearl mussel Margaritifera margaritifera in the River Dee, Scotland. Aquatic Conservation: Marine and Freshwater Ecosystems. 22:318-330.
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2012.
Impacts of climate, host and landscape factors on Culicoides species in Scotland. Medical and Veterinary Entomology. 26:168-177.
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2012.
Impacts of warming on the structure and functioning of aquatic communities: individual- to ecosystem-level responses. Chapter 2. Advances in Ecological Research. 47:81-176.
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2012.
Inactivation of PbTopo III beta causes hyper-excision of the Pathogenicity Island HAI2 resulting in reduced virulence of Pectobacterium atrosepticum. Molecular Microbiology. 84:648-663.
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2012.
Incorporating uncertainty in predictive species distribution modelling. Philosophical Transactions of the Royal Society B. 367:247-258.
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2012.
Induced mutations in circadian clock regulator Mat-a facilitated short-season adaptation and range extension in cultivated barley. Proceedings of the National Academy of Sciences, USA. 109:4326-4331.
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2012.
Integrating economic and biophysical data in assessing cost-effectiveness of buffer strip placement. Journal of Environmental Quality. 41:380-388.
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2012.
Investigating preference-performance relationships in aboveground-belowground life cycles: a laboratory and field study with the vine weevil (Otiorhynchus sulcatus). Bulletin of Entomological Research. 102:63-70.
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2012.
Kale population improvement and cultivar production. Euphytica. 184:275-288.
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2012.
Landscapes of challenge and change: contested views of the Cairngorms National Park. Landscape Research. 37:451-466.
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2012.
Linking process to outcomes - internal and external criteria for a stakeholder involvement in River Basin Management Planning. Ecological Economics. 77:113-122.
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2012.
Long-term spatial pattern change in a semi-arid plant community: The role of climate and composition. Acta Oecologia. 45:8-15.
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2012.
Managed honey bee colony losses in Canada, China, Europe, Israel and Turkey, for the winters of 2008-9 and 2009-10. Journal of Agricultural Research. 51:91-114.
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2012.
Managing the nutrition of plants and people. Applied and Environmental Soil Science, 2012, Article id 104826, 13pp..
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2012.
Mapping of earthworm distribution for the British Isles and Eire highlights the under-recording of an ecologically important group. Biodiversity and Conservation. 21:475-485.
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2012.
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2012.
Mechanisms underlying the anti-proliferative effects of berry components in in vitro models of colon cancer. Current Pharmaceutical Biotechnology. 13:200-209.
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2012.
Metabolite profiling of maize kernels - genetic modification versus environmental influence. Journal of Agricultural and Food Chemistry. 60:3005-3012.
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2012.
Microbial response to organic matter enrichment in the oligotrophic Levantine Basin (Eastern Mediterranean). Geomicrobiology Journal. 29:648-655.
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2012.
Mineralogy and chemical forms of lead and zinc in abandoned mine wastes and soils: an example from Morocco. Journal of Geochemical Exploration. 113:56-67.
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2012.
Modeling self-censoring of polluter pays protest votes in stated preference research to support resource damage estimations in environmental liability. Resource and Energy Economics. 34:151-166.
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2012.
Modelling the dynamics of feral alfalfa populations and its management implications. PLoS One. 7:e39440.
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2012.
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2012.
Mutation of Arabidopsis spliceosomal timekeeper locus 1 causes circadian clock defects. The Plant Cell. 24:4066-4082.
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2012.
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2012.
A new approach to simulating stream isotope dynamics using Markov switching autoregressive models. Advances in Water Resources. 46:20-30.
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2012.
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2012.
A new physical interpretation of plant root capacitance. Journal of Experimental Botany. 63:6149-6159.
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2012.
Nitrogen deposition enhances moss growth but leads to an overall decline in habitat condition in mountain moss-sedge heath. Global Change Biology. 18:290-300.
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2012.
A novel application of natural fluorescence to understand the sources and transport pathways of pollutants from livestock farming in small headwater catchments. Science of the Total Environment. 417:169-182.
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2012.
Nucleoli: Composition, function and dynamics (Review). Plant Physiology. 158:44-51.
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2012.
Nutrient emissions to water from septic tank systems in rural catchments: uncertainties and implications for policy. Environmental Science and Policy.. 24:71-82.
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2012.
Opportunities for improving phosphorus-use efficiency in crop plants. New Phytologist. 195:306-320.
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2012.
Over-seasons analysis of quantitative trait loci affecting phenolic content and antioxidant capacity in raspberry. Journal of Agricultural and Food Chemistry. 60:5360-5366.
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2012.
Oviposition and feeding behaviour by the vine weevil Otiorhynchus sulcatus on red raspberry: effects of cultivars and plant nutritional status. Agricultural and Forest Entomology. 14:157-163.
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2012.
Permeability of intertidal sandflats: Impact of temporal variability on sediment metabolism. Continental Shelf Research. 42:41-50.
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2012.
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2012.
Phenological trends and trophic mismatch across multiple levels of a North Sea pelagic food web. International Journal of Plant Genomics. 454:119-133.
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2012.
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2012.
Powdery scab resistance in Solanum tuberosum: an assessment of cultivar x environment effect. Plant Pathology. 61:29-36.
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2012.
Predicting penetrometer resistance from the compression characteristic of soil. Soil Science Society of America Journal. 76:361-369.
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2012.
Predicting soil chemical composition and other soil parameters from field observations using a neural network. Computers and Electronics in Agriculture. 82:108-116.
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2012.
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2012.
Prevalence and survival of potential pathogens in source segregated green waste compost. Science of the Total Environment. 431:128-138.
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2012.
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2012.
Protein elemental sparing and codon usage bias are correlated among bacteria. Molecular Ecology. 21:2480-2487.
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2012.
Pushing boundaries in above-belowground interactions. Functional Ecology. 26:305-306.
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2012.
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2012.
Recovering phosphorus from soil - A root solution? Environmental Science and Technology. 46:1977-1978.
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2012.
Relationships between climate, water resources, land use and diffuse pollution and the significance of uncertainty in climate change. Journal of Hydrology. 434:19-35.
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2012.
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2012.
Reservoir sedimentation and its mitigating strategies: a case study of Angereb reservoir (NW Ethiopia). Journal of Soil and Sediments. 12:291-305.
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2012.
Riparian field margins: can they enhance the functional structure of ground beetle (Coleoptera: Carabidae) assemblages in intensively managed grassland landscapes? Journal of Applied Ecology. 49:1384-1395.
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2012.
Riparian field margins: their potential to enhance biodiversity in intensively managed grasslands. Insect Conservation and Diversity. 5:86-94.
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2012.
Risk assessment of the use of PAS100 green composts in sheep and cattle production in Scotland. Waste Management. 32:117-130.
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2012.
Risk perception - Issues for flood management in Europe. Natural Hazards and Earth System Sciences. 12:2299-2309.
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2012.
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The role of groundwater characteristics in catchment recovery from nitrate pollution. Hydrology Research. 43:560-575.
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2012.
The role of secretion systems and small molecules in soft-rot enterobacteriaceae pathogenicity. Annual Review of Phytopathology. 50:425-449.
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2012.
Root elongation is restricted by axial but not by radial pressures: so what happens in field soil? Plant and Soil. 360:15-18.
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2012.
Rufous-legged owl (Strix rufipes) and Austral pygmy owl (Glaucidium nanum) stand use in a gradient of disrupted and old growth Andean temperate forests, Chile. Studies on Neotropical Fauna and Environment. 47:33-40.
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2012.
Sharing public space across difference: attunement and the contested burdens of choreographing encounter. Social and Cultural Geography. 13:801-820.
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2012.
Social risk amplification as an attribution: the case of zoonotic disease outbreaks. Journal of Risk Research. 15:1049-1074.
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2012.
Soil information in support of policy making and awareness raising. Current Opinion in Environmental Sustainability. 4:1-7.
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2012.
Soil nitrate reducing processes - drivers, mechanisms for spatial variation, and significance for nitrous oxide production. Frontiers in Microbiology. 3:407.
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2012.
Soil strength and macropore volume limit root elongation rates in many UK agricultural soils. Annals of Botany. 110:259-270.
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2012.
Soil tillage effects on the efficacy of cultivars and their mixtures in winter barley. Field Crops Research. 128:91-100.
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2012.
Some elements are more equal than others: soil-to-plant transfer of radiocaesium and radiostrontium, revisited. Plant and Soil. 355:23-27.
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2012.
Spatio-temporal MODIS EVI gap filling under cloud cover: an example in Scotland. ISPRS Journal of Photogrammetry and Remote Sensing. 72:56-72.
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2012.
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SPICY: towards automated phenotyping of large pepper plants in the greenhouse. Functional Plant Biology. 39:870-877.
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2012.
Stable carbon isotope analysis of fluvial sediment fluxes over two contrasting C4-C3 semi-arid vegetation transitions. Rapid Communications in Mass Spectrometry. 26:2386-2392.
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2012.
Suboptimal dietary zinc intake promotes vascular inflammation and atherogenesis in a mouse model of atherosclerosis. Molecular Nutrition and Food Research. 56:1097-1105.
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2012.
A survey of the trichostrongylid nematode species present on UK sheep farms and associated anthelmintic control practices. Veterinary Parasitology. 189:299-307.
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2012.
Sustaining multifunctional forestry through the developing of social capital and promoting participation: A case of multiethnic mountain communities. Small Scale Forestry Journal. 11:301-319.
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2012.
Systems approaches in global change and biogeochemistry research. Philosophical Transactions of the Royal Society. Series B. Biological Sciences.. 367:311-321.
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2012.
A systems biology view of responses to lignin biosynthesis perturbations in Arabidopsis. The Plant Cell. 24:3506-3529.
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2012.
The Tarland Catchment Initiative and its effect on stream water quality and macroinvertebrate indices. Journal of Environmental Quality. 41:314-321.
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2012.
Testing the distinctness of shoot ionomes of angiosperm families using the Rothamsted Park Grass Continuous Hay Experiment. New Phytologist. 196:101-109.
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2012.
The TGB1 movement protein of potato virus X reorganises actin and endomembranes into the X--body, a viral replication factory. Plant Physiology. 158:1359-1370.
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2012.
Thiol synthetases of legumes: immunogold localization and differential gene regulation by phytohormones. Journal of Experimental Botany. 63:3923-3934.
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2012.
Tibet is one of the centers of domestication of cultivated barley. Proceedings of the National Academy of Sciences, USA. 109:16969-16973.
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2012.
The tomato genome sequence provides insights into fleshy fruit evolution. Nature. 485:635-641.
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2012.
Top 10 plant pathogenic bacteria in molecular plant pathology. Molecular Plant Pathology. 13:614-629.
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2012.
Transcriptional changes in teladorsagia circumcincta upon encountering host tissue of differing immune status. Parasitology. 139:387-405.
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2012.
Transcriptome survey reveals increased complexity of the alternative splicing landscape in Arabidopsis. Genome Research. 22:1184-1195.
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2012.
Treatment with fungicides influences phytochemical quality of blackcurrant juice. Annals of Applied Biology. 160:86-96.
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2012.
Triggering change: towards a conceptualisation of major change processes in farm decision-making. Journal of Environmental Management. 104:142-151.
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2012.
Understanding people's ideas on natural resource management: research on social representations of nature. Society and Natural Resources.. 25:1167-1181.
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2012.
Understanding spatial variability of soil properties: a key step in establishing field- to farm-scale agro-ecosystem experiments. Rapid Communications in Mass Spectrometry. 26:2413-2421.
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2012.
Variation, across environments within the UK, in grain protein and grain hardness, in wheat varieties of differing distilling quality. Field Crops Research. 127:146-152.
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2012.
Water dynamics of the root zone: Rhizosphere biophysics and its control on soil hydrology. Vadose Zone Journal. 11
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The weaker sex? The propensity for male-biased piglet mortality PLoS ONE. 7:e30318.
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2012.
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Woodland networks in a changing climate: Threats from land use change. Biological Conservation. 149:93-102.
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2012.
Yield response to fungicide of spring barley genotypes differing in disease susceptibility and canopy structure. Field Crops Research. 139:9-19.
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2012.
You again - what are you researching this time? can you ever "leave the field"? Fieldwork in Religion. 7:164-179.
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2012.
A conceptual framework for expert opinions in forensic geoscience. Science and Justice.
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2012.
The 3rd DBCLS BioHackathon: improving life science data integration with Semantic Web technologies. Journal of Biomedical Semantics. 4
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2013.
Activation of hatching in diapaused and quiescent Globodera pallida. Parasitology. 140:445-454.
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2013.
Addressing gender imbalances in animal conservation. Animal Conservation. 16:131-133.
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2013.
Agriculture: Feeding the future. Nature. 499:23-24.
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2013.
Alpine cushion plants inhibit the loss of phylogenetic diversity in severe environments. Ecology Letters. 16:478-486.
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2013.
Alternative splicing at the intersection of biological timing, development, and stress responses. The Plant cell. 25:3640-3656.
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2013.
Anchoring and ordering NGS contig assemblies by population sequencing (POPSEQ). Plant Journal. 76:718-727.
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2013.
Anticipating and managing future trade-offs and complementarities between ecosystem services. Ecology and Society, 18, 5..
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2013.
Application of Bayesian Belief Networks to quantify and map areas at risk to soil threats: using soil compaction as an example. Soil Tillage and Research. 132:56-68.
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2013.
An approach to the determination of winter chill requirements for different Ribes cultivars. Plant Biology. 15:18-27.
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2013.
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Assessing the willingness to pay for reliable domestic water supply via catchment management: results from a contingent valuation survey in Nairobi City, Kenya. Journal of Environmental Planning and Management. 56:1511-1531.
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2013.
Barley whole exome capture: a tool for genomic research in the genus Hordeum and beyond. Plant Journal. 76:494-505.
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2013.
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2013.
Biochar addition to an arsenic contaminated soil increases arsenic concentrations in the pore water but reduces uptake to tomato plants (Solanum lycopersicum L.). Science of the Total Environment. 454-455:598-603.
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2013.
Biomechanics of nodal, seminal and lateral roots of barley: effects of diameter, waterlogging and mechanical impedance. Plant and Soil. 370:407-418.
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2013.
Biophysics of the Vadose Zone: from reality to model systems and back again. Vadose Zone Journal. 12
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2013.
Breeding low-glycemic index barley for functional food. Field Crops Research. 154:31-39.
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2013.
Burkholderia diazotrophica sp. nov., isolated from root nodules of Mimosa spp. International Journal of Systematic and Applied Microbiology. 63:435-441.
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Caffeoyl Shikimate Esterase (CSE) is an enzyme in the lignin biosynthetic pathway. Science. 341:1103-1106.
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2013.
Calcification and ocean acidification: new insights from the coccolithophore Emiliania huxleyi. New Phytologist. 199:1-3.
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2013.
Can plant-microbe-insect interactions enhance or inhibit the spread of invasive species? Functional Ecology. 27:661-671.
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2013.
Can root electrical capacitance be used to predict root mass in soil? Annals of Botany. 112:457-464.
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2013.
Challenges and opportunities for animal conservation from renewable energy development. Animal Conservation. 16:367-369.
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2013.
Changes in ecosystem structure, function and hydrological connectivity control water, soil and carbon losses in semi-arid grass to woody vegetation transitions. Earth Surface Processes and Landforms. 38:1602-1611.
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2013.
Climate change impacts and adaptation scope for agriculture indicated by agro-meteorological metrics. Agricultural Systems. 114:15-31.
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2013.
Community, cooperation and conflict: negotiating the social wellbeing benefits of urban greenspace experience. Landscape and Urban Planning. 112:1-9.
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2013.
A comparative study of the effects of four treatment regimes on ivermectin efficacy, body weight and pasture contamination in lambs naturally infected with gastrointestinal nematodes in Scotland. International Journal for Parasitology - Drugs and Drug Resistance. 3:77-84.
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2013.
A comparison of enhancement techniques for footwear impressions on dark and patterned fabrics. Journal of Forensic Sciences. 58:1472-1485.
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2013.
Comparison of soil carbon stocks in Scottish soils between 1978 and 2009. European Journal of Soil Science. 64:455-465.
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2013.
Concentrations and geographic distribution of selected organic pollutants in Scottish surface soils. Environmental Pollution. 182:15-27.
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2013.
The concept and measurement of importance: a comment on Rees et al. 2012. Journal of Ecology. 101:1369-13789.
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2013.
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2013.
Considering the source: Commercialisation and trust in agri-environmental information and advisory services in England. Journal of Environmental Management. 118:96-205.
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2013.
Construction of reference chromosome-scale Pseudomolecules for potato: integrating the potato genome with genetic and physical maps. G3-Genomes Genomes Genetics. 3:2031-2047.
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2013.
Contributions of roots and rootstocks to sustainable, intensified crop production. Journal of Experimental Botany. 64:1209-1222.
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2013.
A cost-effectiveness analysis of water security and water quality: impacts of climate and land-use change on the River Thames system. Philosophical Transactions of the Royal Society, Series A. 371:201204B.
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Declining chilling and its impact on temperate perennial crops. Environmental and Experimental Botany. 91:48-62.
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Differences in the life parameters related to population increase of some major genotypes of Scottish Myzus persicae, the main vector of potato leafroll virus. Iranian Journal of Plant Pathology. 48:155-160.
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2013.
Distributed lag models for hydrological data. Biometrics. 69:537-544.
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2013.
Draft genome sequences of four Dickeya dianthicola and four Dickeya solani strains. Genome Announcements. 1:e0087-12.
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Effects of drought stress during flowering of two pot-grown blackcurrant (Ribes nigrum L.) cultivars. Scientia Horticulturae. 162:365-373.
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2013.
Endoscopy as a novel method for assessing endoparasite burdens in free-ranging European shags (Phalacrocorax aristotelis). Methods in Ecology and Evolution. 4:207-216.
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2013.
Environmental change impacts on the C- and N-cycle of European forests: a model comparison study. Biogeosciences. 10:1751-1773.
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2013.
The ESX/type VII secretion system modulates development, but not virulence, of the plant pathogen Streptomyces scabies. Molecular Plant Pathology. 14:119-130.
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2013.
Europe-wide dampening of population cycles in keystone herbivores. Science. 340:63-66.
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2013.
Ex-ante analysis of the regional impacts of the Common Agricultural Policy: a rural-urban recursive dynamic CGE model approach. European Planning Studies. Published online..
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Exposure to chemical cocktails before or after conception - the effect of timing on ovarian function. Molecular and Cellular Endocrinology. 376:156-172.
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Food security in a water-scarce world: making virtual water compatible with crop water use and food trade. Scientific Papers Series: Management, Economic Engineering in Agriculture and Rural Development. 13:431-443.
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2013.
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2013.
FR-H3: a new QTL to assist in the development of fall-sown barley with superior low temperature tolerance. Theoretical and Applied Genetics. 126:335-347.
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2013.
Genetic and QTL analyses of yield and a set of physiological traits in pepper. Euphytica. 190:181-201.
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2013.
Genomic variations associated with attenuation in Mycobacterium avium subsp paratuberculosis vaccine strains. BMC Microbiology, 13, Article No.11..
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2013.
Genomics: the early days of late blight. eLife. 2:e00954.
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2013.
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2013.
Gradients in fracture force and grazing resistance across canopy layers in seven tropical grass species. Grass and Forage Science. 68:278-287.
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2013.
Green space and stress: evidence from cortisol measures in deprived urban communities. International Journal of Environmental Research and Public Health.
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2013.
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2013.
Holocene evolution in weathering and erosion patterns in the Pearl River delta. Geochemistry Geophysics Geosystems. 14:2349-2368.
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2013.
How can we exploit above-belowground interactions to assist in addressing the challenges of food security? Frontiers in Plant Science: Plant-Microbe Interactions. 4
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2013.
How effective are agricultural management measures at improving water quality? Intersezioni - Online magazine of the Agronomist Professional Association of Milano, 40, 18 December 2013..
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2013.
How rapid is aphid-induced signal transfer between plants via common mycelial networks? Communicative and Integrative Biology. 6:e25904.
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2013.
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2013.
Identification of genes in the VirR regulon of Pectobacterium atrosepticum and characterization of their roles in quorum sensing-dependent virulence. Environmental Microbiology. 15:687-701.
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2013.
Identification of the phenolic components in Bulgarian raspberry cultivars by LC-ESI-MSn. International Journal of Agricultural Science Research. 3:127-137.
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2013.
Identifying environmental drivers of insect phenology across space and time: Culicoides in Scotland as a case study. Bulletin of Entomological Research. 103:155-170.
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2013.
The impact of increased food availability on survival of a long-distance migratory bird. Ecology. 94:221-230.
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2013.