Publications list
Filters: First Letter Of Last Name is B [Clear All Filters]
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2013.
The impact of soil type, biology and temperature on the environmental persistence of non-toxigenic E. coli O157. Biology and Environment: Proceedings of the Royal Irish Academy. 113B:41-46.
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2013.
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2013.
Incorporating weather sensitivity in inventory-based estimates of boreal forest productivity: a meta-analysis of process model results. Ecological Modelling. 260:25-35.
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2013.
Infections do not predict shedding in co-infections with two helminths from a natural system. Ecology. 95:1684-1692.
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2013.
Influence of seasonal weather and climate variability on crop yields in Scotland. International Journal of Biometeorology. 57:605-614.
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2013.
Infra-red thermography for high throughput field phenotyping in Solanum tuberosum. PLoS ONE. 8:e65816.
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2013.
Insights into the low temperature adaptation and nutritional flexibility of a soil persistent Escherichia coli. FEMS Microbiology Ecology. 84:75-85.
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Introduction to the special feature on mechanisms of plant competition. Functional Ecology. 27:831-832.
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2013.
An investigation using the choice experiment method into options for reducing illegal bushmeat hunting in western Serengeti. Conservation Letters. 6:37-45.
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2013.
Knowledge Exchange: a review and research agenda for environmental management. Environmental Conservation. 40:19-36.
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2013.
Knowledge management for land degradation monitoring and assessment: an analysis of contemporary thinking. Land Degradation and Development. 24:307-322.
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2013.
Laboratory study on the potential use of recycled inert construction waste material in the substrate mix for extensive green roofs. Ecological Engineering. 61:706-714.
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2013.
Leaf area estimation of medium size plants using optical metrology. Revista Brasileira de Engenharia Agricola e Ambiental. 17:595-601.
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2013.
Limited evolutionary rescue of locally adapted populations facing climate change. Philosophical Transactions of the Royal Society B. 368:e20120083.
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2013.
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Long-term vegetation stability in northern Europe as assessed by changes in species co-occurrences. Plant Ecology and Biodiversity. 6:289-302.
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2013.
Matching roots to their environment. Annals of Botany. 112:207-222.
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Microbial biomass phosphorus contributions to phosphorus solubility in riparian vegetated buffer strip soils. Biology and Fertility of Soils. 49:1237-1241.
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2013.
Misuse of the phytoplanktonzooplankton dichotomy: the need to assign organisms as mixotrophs within plankton functional types. Journal of Plankton Research. 35:3-11.
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2013.
Modelling the impact of vaccination on tuberculosis in badgers. Epidemiology and Infection. 141:1417-1427.
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2013.
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2013.
Natural capital and ecosystem services, developing an appropriate soils framework as a basis for valuation. Soil Biology and Biochemistry. 57:1023-1033.
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2013.
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2013.
Nitrous oxide mitigation in UK agriculture. Soil Science and Plant Nutrition.. 59:3-15.
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2013.
No evidence requiring change in the risk assessment of Inachis io larvae. Ecological Modelling. 268:103-122.
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2013.
A novel framework for linking functional diversity of plants with other trophic levels for the quantification of ecosystem services. Journal of Vegetation Science. 24:942-948.
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2013.
A novel grass hybrid to reduce flood generation in temperate regions. Nature Scientific Reports, 3, Article no.1683..
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2013.
Observations on the epidemiology and interactions between myxomatosis, coccidiosis and helminth parasites in a wild rabbit population in Scotland. European Journal of Wildlife Research. 59:557-562.
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2013.
Partial complementation of Sinorhizobium meliloti bacA mutant phenotypes by the Mycobacterium tuberculosis BacA protein. Journal of Bacteriology. 195:389-398.
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2013.
People, predators and perceptions: patterns of livestock depredation by snow leopards and wolves. Journal of Applied Ecology. 50:550-560.
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2013.
Peri-conceptional changes in maternal exposure to sewage sludge chemicals disturbs fetal thyroid gland development in sheep. Molecular and Cellular Endocrinology. 367:98-108.
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2013.
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2013.
Phylogenetic overview of the Boletineae. Fungal Biology. 117:479-511.
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2013.
Plant ecology's guilty little secret: understanding the dynamics of plant competition. Functional Ecology. 27:918-929.
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The potential for Scottish cultivated top soils to lose or gain soil organic carbon. Soil Use and Management. 29:39-47.
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2013.
Preface: Future roots of productivity. Journal of Experimental Botany. 64:1179.
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2013.
Protected area networks and savannah bird biodiversity in the face of climate change and land degradation. Ecology Letters. 16:1061-1068.
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2013.
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2013.
Quantitative high resolution mapping of HvMLH3 foci in barley pachytene nuclei reveals a strong distal bias and weak interference. Journal of Experimental Botany. 64:2139-2154.
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2013.
Reforming the CAP - with area-based Pillar 1 payments, who wins and who loses? Land Use Policy. 31:209-222.
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2013.
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2013.
Regulon studies and in planta role of the BraI/R quorum-sensing system in the plant-beneficial Burkholderia cluster. Applied and Environmental Microbiology. 79:4421-4432.
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Response to soil biota by native, introduced non-pest, and pest grass species: is responsiveness a mechanism for invasion? Biological Invasions. 15:1343-1353.
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2013.
Risk amplification as social attribution. Risk Management. 15:132-153.
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2013.
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The role of ecosystems and their management in regulating climate, and soil, water and air quality. Journal of Applied Ecology. 50:812-829.
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2013.
The role of map-based environmental information in supporting integration between river basin planning and spatial planning. Environmental Science and Policy. 30:81-89.
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2013.
The role of the potato (Solanum tuberosum L.) CCD8 gene in stolon and tuber development. New Phytologist. 198:1108-1120.
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2013.
Root hairs improve root penetration, root-soil contact, and phosphorus acquisition in soils of different strength. Journal of Experimental Botany. 64:3711-3721.
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2013.
Root-soil friction: quantification provides evidence for measurable benefits for manipulation of root-tip traits. Plant Cell and Environment. 36:1085-1092.
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2013.
The rpg4-mediated resistance to wheat stem rust (Puccinia graminis) in barley (Hordeum vulgare) requires Rpg5 gene, a second NBS-LRR gene, and an actin depolymerization factor. Molecular Plant-Microbe Interactions. 26:407-418.
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Small changes in ambient temperature affect alternative splicing in Arabidopsis thaliana. Plant Signalling and Behaviour. 8:e24638.
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2013.
Status and prospects of plant virus control through interference with vector transmission. Annual Review of Phytopathology, 51,177-201.. 51:177-201.
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2013.
Stochastic model-based methods for handling uncertainty in areal interpolation. International Journal of Geographical Information Science. 27:785-803.
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2013.
Study of wild Solanum species to identify sources of resistance against the green peach aphid, Myzus persicae (Sulzer). American Journal of Potato Research.. 90:66-70.
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2013.
The sub-cellular localisation of the potato (Solanum tuberosum L.) carotenoid biosynthetic enzymes, CrtRb2 and PSY2. Protoplasma. 250:1381-1392.
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2013.
Symbiotic relationships between soil fungi and plants reduce N2O emissions from soil. ISME Journal. 8:1336-1345.
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2013.
A synthetic system for expression of components of a bacterial microcompartment. Microbiology-SGM. 159:2427-2436.
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2013.
A temporal dimension of household vulnerability in three rural communities in Lijiang, China. Human Ecology. Published online.
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2013.
Three-way interactions between plants, microbes and insects. Functional Ecology. 27:567-573.
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Toward understanding the role of aphid effectors in plant infestation. Molecular Plant Microbe Interactions. 26:25-30.
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2013.
Towards a unified paradigm for sequence-based identification of fungi. Molecular Ecology. 22:5271-5277.
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2013.
Transcription termination and chimeric RNA formation controlled by Arabidopsis thaliana FPA. PLoS Genetics. 9:e1003867.
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Underground signals carried through common mycelial networks warn neighbouring plants of aphid attack. Ecology Letters. 16:835-843.
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Understanding spatial variability of soil properties: a key step in establishing field- to farm-scale agro-ecosystem experiments (vol 26, pg 2413, 2012). (Correction). Rapid Communications in Mass Spectrometry. 27:284.
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2013.
Unpredicted impacts of insect endosymbionts on interactions between soil organisms, plants and aphids. Proceedings of the Royal Society B. 280:1471-2954.
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2013.
Use of multicriteria decision analysis to address conservation conflicts. Conservation Biology. 27:936-944.
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2013.
The use of transient expression systems for the rapid production of virus-like particles in plants. Current Pharmaceutical Design. 19:5564-5573.
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Using Tablet for visual exploration of second generation sequencing data. Briefings in Bioinformatics. 14:193-202.
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2013.
Variability in the intensity of nematode larvae from gastrointestinal tissues of a natural herbivore. Parasitology. 140:632-640.
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2013.
Variation in the interaction between alleles of HvAPETALA2 and microRNA172 determines the density of grains on the barley inflorescence. Proceedings of the National Academy of Sciences of the USA. 110:16675-16680.
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2013.
Vitamin D in pregnancy at high latitude in Scotland. British Journal of Nutrition. 109:898-905.
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2013.
Agritourism from the perspective of providers and visitors: a typology-based investigation. Tourism Management. 40:405.
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2014.
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2014.
Arbuscular mycorrhizal fungi and aphids interact by changing host plant quality and volatile emission. Functional Ecology. 28:375-385.
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2014.
Ash dieback in the UK: a review of the ecological and conservation implications and potential management options. Biological Conservation. 175:95-109.
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2014.
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2014.
Assessing the influence of compost and biochar amendments on the mobility and toxicity of metals and arsenic in a naturally contaminated mine soil. Environmental Pollution. 186:195-202.
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2014.
Assessing the robustness of vegetation indices to estimate wheat N in Mediterranean environments. Remote Sensing. 6:2827-2844.
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2014.
Assessing the vulnerability of the marine bird community in the western North Sea to climate change and other anthropogenic impacts. Marine Ecology Progress Series. 507:277-295.
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2014.
Assessment of the use of sediment fences for control of erosion and sediment phosphorus loss after potato harvesting on sloping land. Science of the Total Environment. 468-469:1234-1244.
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2014.
Atmospheric deposition of phosphorus to land and freshwater. Environmental Science: Processes and Impacts. 16:1608-1617.
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2014.
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Between migration load and evolutionary rescue: dispersal, adaptation and the response of spatially structured populations to environmental change. Proceedings of the Royal Society Series B. 281:1471-2954.
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2014.
Beyond crofting: Assessing change on Scotland's small-scale holdings. Scottish Geographical Journal. 130:223-242.
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2014.
BioHackathon series in 2011 and 2012: penetration of ontology and linked data in life science domains. Journal of Biomedical Semantics. 5
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2014.
Can biogas digesters help to reduce deforestation in Africa? Biomass and Bioenergy. 70:87-98.
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2014.
Can faecal markers detect a short term reduction in forage intake by cattle? Animal Feed Science and Technology. 194:44-57.
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2014.
A chloroplast retrograde signal regulates nuclear alternative splicing. Science. 344:427-430.
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2014.
Clay mineral type effect on bacterial enteropathogen survival in soil. Science of the Total Environment. 468-469:302-305.
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2014.
Climate change adaptation planning in agriculture: processes, experiences and lessons learned from early adapters. Mitigation and Adaptation Strategies for Global Change. 19:411-430.
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2014.
CO2 concentrating mechanisms and environmental change. Aquatic Botany. 118:24-37.
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2014.
Coexisting small mammals display contrasting strategies for tolerating instability in arable habitat. European Journal of Wildlife Research. 60:811-820.
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2014.
Community-driven development for computational biology at Sprints, Hackathons and Codefests. BMC Bioinformatics. Suppl 14
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Complete genome sequence of Burkholderia phymatum STM815T, a broad host range and efficient nitrogen-fixing symbiont of Mimosa species. Standards in Genomic Sciences. 9
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2014.
Compositional methods for estimating elemental concentrations below the limit of detection in practice using R. Journal of Geochemical Exploration. 141:71-77.
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2014.
Construction of a dense SNP map of a highly heterozygous diploid potato population and QTL analysis of tuber shape and eye depth. Theoretical and Applied Genetics. 127:2159-2171.
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The context dependence of beneficiary feedback effects in plant facilitations. New Phytologist. 204:386-396.
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Contrasting impacts of afforestation on nitrous oxide and methane emissions. Agricultural and Forest Meteorology. 198:82-93.
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2014.
The current decline of tropical marsupials in Australia: is history repeating? Global Ecology and Biogeography. 23:181-190.
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2014.
Cytokine expression in the placenta of pregnant cattle after inoculation with Neospora caninum. Veterinary Immunology and Immunopathology. 161:77-89.
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2014.
Day length dependent restructuring of the leaf transcriptome and metabolome in potato genotypes with contrasting tuberisation phenotypes. Plant Cell and Environment. 37:1351-1363.
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Developing monitoring protocols for cost-effective surveillance of lichens. The Lichenologist. 46:471-482.
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Dietary mineral supplies in Africa. Physiologia Plantarum. 151:208-229.
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2014.
The direct response of the external mycelium of arbuscular mycorrhizal fungi to temperature and the implications for nutrient transfer. Soil Biology and Biochemistry. 78:109-117.
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2014.
Discontinuity in the responses of ecosystem processes and multifunctionality to altered soil community composition. Proceedings of the National Academy of Sciences of the United States of America, 111, 14478-14483..
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2014.
Diversity of Phytophthora infestans from Poland. Plant Pathology. 63:203-211.
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2014.
Do Marine Protected Areas deliver flows of ecosystem services to support human welfare? Marine Policy. 44:139-148.
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2014.
Does grazing on biosolids-treated pasture pose a pathophysiological risk associated with increased exposure to endocrine disrupting compounds? Journal of Animal Science. 92:3185-3198.
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2014.
DTREEv2, a computer-based support system for the risk assessment of genetically modified plants. New Biotechnology. 31:166-171.
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2014.
Effects of riparian buffer strips on ground beetles (Coleoptera, Carabidae) within an agricultural landscape. Insect Conservation and Diversity. 7:172-184.
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2014.
Energy costs of carbon dioxide concentrating mechanisms in aquatic organisms. Photosynthesis Research. 121:111-124.
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2014.
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Environmental risks and futures. Procedia Environmental Sciences, 21, 1-2..
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Epigenetic status in the offspring of spontaneous and assisted conception. Human Reproduction. 29:1452-1458.
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2014.
Escherichia coli common pilus (ECP) targets arabinosyl residues in plant cell walls to mediate adhesion to fresh produce plants. Journal of Biological Chemistry. 289:34349-34365.
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2014.
Evaluating knowledge exchange in interdisciplinary and multi-stakeholder research. Global Environmental Change - Human and Policy Dimensions. 25:204-220.
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2014.
Evaluating wider benefits of natural flood management strategies: an ecosystem-based adaptation perspective. Hydrology Research. 45:774-787.
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2014.
Evaluation of methods to age Scottish red deer: the balance between accuracy and practicality. Journal of Zoology. 294:180-189.
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2014.
Exploring institutional changes in agriculture to inform adaptation planning to climate change in transition countries. Mitigation and Adaptation Strategies for Global Change. Published online..
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2014.
Facilitation displaces hotspots of diversity and allows communities to persist in heavily stressed and disturbed environments. Journal of Vegetation Science.. 25:66-76.
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2014.
Facilitative plant interactions and climate simultaneously drive alpine plant diversity. Ecology Letters. 17:193-202.
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2014.
Factors determining the stability and productivity of small scale anaerobic digesters. Biomass and Bioenergy. 70:51-57.
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2014.
Field phenotyping of potato to assess root and shoot characteristics associated with drought tolerance. Plant and Soil. 378:351-363.
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2014.
A framework for managing runoff and pollution in the rural landscape using a Catchment Systems Engineering approach. Science of the Total Environment. 468-469:1245-1254.
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The future of the northeast Atlantic benthic flora in a high CO2 world. Ecology and Evolution. 4:2787-2798.
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Genetical and comparative genomics of Brassica under altered Ca supply identifies Arabidopsis Ca-transporter orthologs. The Plant Cell. 26:2818-2830.
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Genome-wide QTL and bulked transcriptomic analysis reveals new candidate genes for the control of tuber carotenoid content in potato (Solanum tuberosum L.). Theoretical and Applied Genetics. 127:1917-1933.
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The geographical patterns of symbiont diversity in the invasive legume Mimosa pudica can be explained by the competitiveness of its symbionts and by the host genotype. Environmental Microbiology. 16:2099-2111.
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Glucose uptake by the brain on chronic high-protein weight-loss diets with either moderate or low amounts of carbohydrate. British Journal of Nutrition. 111:586-597.
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2014.
Heather moorland vegetation and air pollution: a comparison and synthesis of three national gradient studies. Payne, R.J.; Caporn, S.J.M.; Field, C.D.; Carroll, J.A.; Edmondson, J.L.; Britton, A.J.; Dise, N.B. Water, Air and Soil Pollution.. 225:ArticleNo.1198.
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2014.
Heterogeneity of experts' opinion regarding opinion regarding opportunities and challenges of tackling defrestation in the tropics: a Q methodology application. Mitigation and Adaptation Strategies for Global Change. 19:621-640.
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2014.
The heterogeneity, distribution and environmental associations of Borrelia burgdorferi sensu lato, the agent of Lyme borreliosis, in Scotland. Frontiers in Public Health, 2, Article 129. 2
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Hybridity of representation: insights from river basin management planning in Scotland. Environment and Planning C: Government and Society. 32:549-566.
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Impacts of exceptional and extreme inter-annual climatic events on the net ecosystem carbon dioxide exchange of a Sitka spruce forest. Agricultural and Forest Meteorology. 184:147-157.
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Improving breeding efficiency in potato using molecular and quantitative genetics. Theoretical and Applied Genetics. 127:2279-2292.
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2014.
Improving the link between payments and the provision of ecosystem services in agri-environment schemes. Ecosystem Services. 9:44-53.
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2014.
Improving the science-policy dialogue to meet the challenges of biodiversity conservation: having a conversation rather than talking at one-another. Biodiversity and Conservation. 23:387-404.
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2014.
In silico identification and characterization of conserved plant microRNAs in barley. Central European Journal of Biology. 9:841-852.
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2014.
In utero exposure to cigarette smoke dysregulates human fetal ovarian developmental signalling. Human Reproduction. 29:1471-1489.
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2014.
In vitro and in vivo models of colorectal cancer: antigenotoxic activity of berries. Journal of Agricultural and Food Chemistry. 62:3852-3866.
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2014.
Increasing phosphorus supply is not the mechanism by which arbuscular mycorrhiza increase attractiveness of bean (Vicia faba) to aphids. Journal of Experimental Botany. 65:5231-5241.
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2014.
Induced variations in Brassinosteroid genes define barley height and sturdiness, and expand the green revolution genetic toolkit. Plant Physiology. 166:1912-1927.
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2014.
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2014.
Influence of soil temperature on Globodera rostochiensis and Globodera pallida. Phytopathologia Mediterranea. 53:396-405.
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2014.
Intensive management in grasslands causes diffuse water pollution at the farm scale. Journal of Environmental Quality. 43:2009-2023.
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2014.
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2014.
Leave only footprints? How traces of movement shape the appropriation of space Cultural Geographies.
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2014.
Lessons learnt from the deployment of a semantic virtual research environment. Journal of Web Semantics. 27-28:70-77.
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2014.
Long noncoding RNA modulates alternative splicing regulators in Arabidopsis. Developmental Cell. 30:166-176.
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2014.
The low recombining pericentromeric region of barley restricts gene diversity and evolution but not gene expression. The Plant Journal. 79:981-992.
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2014.
Mapping species distributions in one dimension by non homogeneous hidden Markov models: freshwater pearl mussels in the River Dee. Environmental and Ecological Statistics. 21:487-505.
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2014.
Methods to investigate the geochemistry of groundwaters with values for nitrogen compounds below the detection limit. Journal of Geochemical Exploration. 141:78-88.
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2014.
Modelling species abundance in a river by Negative Binomial hidden Markov models. Computational Statistics and Data Analysis. 71:599-614.
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2014.