Publications list

Found 2559 results

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2011

Bengsen AJ, Leung LKP, Lapidge SJ, Gordon IJ. 2011. Using a general index approach to analyse camera-trap abundance indices. Journal of Wildlife Management. 75:1222-1227.

Granger SJ, Bol R, Hawkins JMB, White SM, Naden PS, Old GH, Marsh JK, Bilotta GS, Brazier RE, Macleod CJA et al.. 2011. Using artificial fluorescent particles as tracers of livestock wastes within an agricultural catchment. Science of the Total Environment. 409:1095-1103.

Birkel CB, Tetzlaff DT, Dunn SM, Soulsby C. 2011. Using lumped conceptual rainfall-runoff models to simulate daily isotope variability with fractionation in a nested mesoscale catchment. Advances in Water Resources. 34:383-394.

Birkel CB, Tetzlaff D, Dunn SM, Soulsby C. 2011. Using time domain and geographic source tracers to conceptualize streamflow generation processes in lumped rainfall-runoff models. Water Resources Research. 47:15pp.

Ascough PL, Bird MI, Francis SM, Thornton B, Midwood AJ, Scott A, Apperley D. 2011. Variability in oxidative degradation of charcoal: influence of production variables and environmental exposure. Geochimica et Cosmochimica Acta. 75:2361-2378.

Hill PW, Farrar J, Roberts P, Farrell M, Grant H, Newsham KK, Hopkins DW, Bardgett RD, Jones DL. 2011. Vascular plant success in a warming Antarctic may be due to efficient nitrogen acquisition. Nature Climate Change. 1:50-53.

2010

Kim HW, Kim JB, Chu SM, Kim SY, Kim SN, Cho YS, Cho SM, Baek HJ, Park HJ, Lee DJ et al.. 2010. Analysis of anthocyanin composition and content contained from grains of the Korean purple rice varieties by liquid chromatography with diode array detection and electrospray ionization/mass spectrometry (LC-DAD-ESI/MS). Korean Journal of International Agriculture. 22:267-272.

Schornack S, Van Damme M, Bozkurt TO, Cano LM, Smoker M, Thines M, Gaulin E, Kamoun S, Huitema E. 2010. Ancient class of translocated oomycete effectors targets the host nucleus. Proceedings of the National Academy of Sciences, USA. 107:17421-17426.

Walker PG, Viola R, Woodhead M, Jorgensen L, Gordon SL, Brennan RM, Hancock RD. 2010. Ascorbic acid content of blackcurrant fruit is influenced by both genetic and enviromental factors. Functional Plant Science and Biotechnology. 4:40-52.

Gomez LD, Whitehead C, Barakate A, Halpin C, McQueen-Mason SJ. 2010. Automated saccharification assay for determination of digestibility in plant materials. Biotechnology for Biofuels. 3:-23.

Eichmann R, Bischof M, Weis C, Shaw J, Lacomme C, Schweizer P, Duchkov D, Hensel G, Kumlehn J, H R. 2010. BAX INHIBITOR-1 is required for full susceptibility of barley to powdery mildew. Molecular Plant-Microbe Interactions. 23:1217-1227.

Bierman S, Butler A, Marion G, K I. 2010. Bayesian image restoration models for combining expert knowledge on recording activity with species distribution data. Ecography. 33:451-460.

Duthie SJ, Horgan GW, de Roos B, Rucklidge GJ, Reid M, Duncan G, Pirie L, Basten GP, Powers HJ. 2010. Blood folate status and expression of proteins involved in immune function, inflammation and coagulation: Biochemical and proteomic changes in the plasma of humans in response to long-term synthetic folic acid supplementation. Journal of Proteome Research. 9:1941-1950.

Love CG, Graham NS, O'Lochlainn S, Bowen HC, May ST, White PJ, Broadley MR, Hammond JP, King GJ. 2010. A Brassica exon array for whole-transcript gene expression profiling. PLoS One. 5:-e12812.

Pacak A, Strozycki PM, Barciszewska-Pacak M, Alejska M, Lacomme C, Jarmolowski A, Szweykowska-Kulinska Z, Figlerowicz M. 2010. The brome mosaic virus-based recombination vector triggers a limited gene silencing response depending on the orientation of the inserted sequence. Archives of Virology. 155:169-179.

Bontemps C, Elliott GN, Simon MF, Dos Reis J FB, Gross E, Lawton RC, Neto NE, Loureiro MdeF, de Faria SM, Sprent JI et al.. 2010. Burkholderia species are ancient symbionts of legumes. Molecular Ecology. 19:44-52.

Hedley PE, Russell JR, Jorgensen L, Gordon S, Morris JA, Hackett CA, Cardle L, Brennan RM. 2010. Candidate genes associated with bud dormancy release in blackcurrant (Ribes nigrum L.). BMC Plant Biology. 10:-202.

Sonnenberg R, Bransby MF, Hallett PD, Bengough AG, Mickovski SB, Davies MCR. 2010. Centrifuge modelling of soil slopes reinforced with vegetation. Canadian Geotechnical Journal. 47:1415-1430.

Newton AC, Akar T, Baresel JP, Bebeli PJ, Bettencourt E, Bladenopoulos KV, Czembor JH, Fasoula DA, Katsiotis A, Koutis K et al.. 2010. Cereal landraces for sustainable agriculture. A review (Review). Agronomy for Sustainable Development. 30:237-269.

Dagleish MP, Finlayson J, Bayne C, MacDonald S, Sales J, Hodgson JC. 2010. Characterisation and time course of pulmonary lesions in calves after intratracheal infection with Pasteurella multocida A:3. Journal of Comparative Pathology. 142:157-169.

Mitchell C, Johnson SN, Gordon SC, Birch ANE, Hubbard SF. 2010. Combining plant resistance and a natural enemy to control Amphorophora idaei. BioControl. 55:321-327.

Smith P, Gregory PJ, van Vuuren D, Obersteiner M, Havlik P, Rounsevell M, Woods J, Stehfest E, Bellarby J. 2010. Competition for land. Philosophical Transactions of the Royal Society of London B - Biological Sciences. 365:2941-2957.

Bartlett MD, Briones MJI, Neilson R, Schmidt O, Spurgeon D, Creamer RE. 2010. A critical review of current methods in earthworm ecology: From individuals to populations (Review). European Journal of Soil Biology. 46:67-73.

Garrido E, Bennett AE, Fornoni J, Strauss SY. 2010. The dark side of the mycorrhiza. Plant Signaling & Behavior. 5:1019-1021.

Bagavathiannan MV, Gulden RH, Begg GS, Van Acker RC. 2010. The demography of feral alfalfa (Medicago sativa L.) populations occurring in road side habitats in southern Manitoba Canada: Implications for novel trait confinement. Environmental Science and Pollution Research. 17:1448-1459.

Berdeaux O, Gregoire S, Fournier C, Christie WW, Lambelet P, S JL. 2010. Detection of lactobacillic acid in low erucic rapeseed oil - A note of caution when quantifying cyclic fatty acid monomers in vegetable oils. Chemistry and Physics of Lipids. 163:698-702.

Zhang K, Burns IG, Greenwood DJ, Hammond JP, White PJ. 2010. Developing a reliable strategy to infer the effective soil hydraulic properties from field evaporation experiments for agro-hydrological models. Agricultural Water Management. 97:399-409.

Moloney C, Griffin D, Jones PW, Bryan GJ, McLean K, Bradshaw JE, Milbourne D. 2010. Development of diagnostic markers for use in breeding potatoes resistance to Globodera pallida pathotype Pa2/3 using germplasm derived from Solanum tuberosum ssp. andigena CPC 2802. Theoretical and Applied Genetics. 120:679-689.

Foereid B, Bellarby J, Meier-Augenstein W, Kemp HF. 2010. Does light exposure make plant litter more degradable? Plant and Soil. 333:275-285.

Broadley MR, White PJ. 2010. Eats roots and leaves. Can edible horticultural crops address dietary calcium, magnesium and potassium deficiencies? Proceedings of the Nutrition Society. 69:601-612.

Tighe P, Duthie GG, Vaughan N, Brittenden J, Simpson WG, Duthie S, Mutch W, Wahle K, Horgan GW, Thies F. 2010. Effect of increased consumption of whole-grain foods on blood pressure and other cardiovascular risk markers in healthy middle-aged persons: a randomised controlled trial. American Journal of Clinical Nutrition. 94:733-740.

Ouellet DR, Berthiaume R, Holtrop G, Lobley GE, Martineau R, Lapierre H. 2010. Effect of method of conservation of timothy on endogenous nitrogen flows in lactating dairy cows. Journal of Dairy Science. 93:4252-4261.

Broadley MR, Hammond JP, White PJ, Salt DE. 2010. An efficient procedure for normalising ionomics data for Arabidopsis thaliana. New Phytologist. 186:270-274.

Nielson UN, Osler GHR, Campbell CD, Neilson R, Burslem DFRP, van der Wal R. 2010. The enigma of soil animal species diversity revisited: the role of small-scale heterogeneity. PLoS One. 5:-e11567.

Chen XW, Hackett CA, Niks RE, Hedley PE, Booth C, Druka A, Marcel TC, Vels A, Bayer M, Milne I et al.. 2010. An eQTL analysis of partial resistance to Puccinia hordei in barley. PLoS One. 5:-e8598.

Roberts TJ, McKenna SJ, Du CJ, Wuyts N, Valentine TA, Bengough AG. 2010. Estimating the motion of plant root cells from in vivo confocal laser scanning microscopy images. Machine Vision and Applications. 21:921-939.

Casa R, Baret F, Buis S, Lopez-Lozano R, Pascucci S, Palombo A, Jones HG. 2010. Estimation of maize canopy properties from remote sensing by inversion of 1-D and 4-D models. Precision Agriculture. 11:319-334.

Druka A, Franckowiak JD, Lundqvist U, Bonar N, Alexander J, Guzy-Wrobelska J, Ramsay L, Druka I, Grant I, Macaulay M et al.. 2010. Exploiting induced variation to dissect quantitative traits in barley. Biochemical Society Transactions. 38:683-688.

Berepiki A, Lichius A, Shoji JY, Tilsner J, Read ND. 2010. F-actin dynamics in Neurospora crassa. Eukaryotic Cell. 9:547-557.

Milne I, Shaw P, Stephen G, Bayer M, Cardle L, Thomas WTB, Flavell AJ, Marshall DF. 2010. Flapjack - graphical genotype visualization. Bioinformatics. 26:3133-3134.

White PJ, Hammond JP, King GJ, Bowen HC, Hayden RM, Meacham MC, Spracklen WP, Broadley MR. 2010. Genetic analysis of potassium use efficiency in Brassica oleracea. Annals of Botany. 105:1199-1210.

De Maayer P, Chan WY, Venter SN, Toth IK, Birch PRJ, Joubert F, Coutinho TA. 2010. Genome sequence of Pantoea ananatis LMG20103, the causative agent of Eucalyptus blight and dieback. Journal of Bacteriology. 192:2936-2937.

Richards S, Gibbs RA, Gerardo NM, Moran N, Nakabachi A, Stern D, Tagu D, Wilson ACC, Muzny D, Kovar C et al.. 2010. Genome sequence of the pea aphid Acyrthosiphon pisum. PLOS Biology. 8:-e1000313.

Cockram J, White J, Zuluaga D, Smith D, Comadran J, Macaulay M, Luo ZW, Kearsey MJ, Werner P, Harrap D et al.. 2010. Genome-wide association mapping of morphological traits to candidate gene resolution in the un-sequenced barley genome. Proceedings of the National Academy of Sciences, USA. 107:21611-21616.

Yang S, Peng Q, Zhang Q, Zou L, Li Y, Robert C, Pritchard L, Liu H, Hovey R, Wang Q et al.. 2010. Genome-wide identifiction of HrpL-regulated genes in the necrotrophic phytopathogen Dickeya dadantii 3937. PLoS One. 5:-e13472.

Bessell PR, Matthews L, Smith-Palmer A, Rotariu O, Strachan NJC, Forbes KJ, Cowden J, Reid SWJ, Innocent GT. 2010. Geographic determinants of reported human Campylobacter infections in Scotland. BMC Public Health. 10:-423.

Granger SJ, Bol R, Meier-Augenstein W, Leng MJ, Kemp HF, Heaton THE, White SM. 2010. The hydrological response of heavy clay grassland soils to rainfall in south-west England using . Rapid Communications in Mass Spectrometry. 24:475-482.

Grenville-Briggs LJ, Avrova AO, Hay RJ, Bruce CR, Whisson SC, van West P. 2010. Identification of appressorial and mycelial cell wall proteins and a survey of the membrane proteome of Phytophthora infestans. Fungal Biology. 114:702-723.

Grant OM, Tronina L, Ramalho JC, Besson CK, Lobo-Do-Vale R, Pereira JS, Jones HG, Chaves MM. 2010. The impact of drought on leaf physiology of Quercus suber L. trees: comparison of an extreme drought event with chronic rainfall reduction. Journal of Experimental Botany. 61:4361-4371.

Stroud JL, Li HF, Lopez-Bellido FJ, Broadley MR, Foot I, Fairweather-Tait SJ, Hart DJ, Hurst R, Knott P, Mowat H et al.. 2010. Impact of sulphur fertilisation on crop response to selenium fertilisation. Plant and Soil. 332:31-40.

Bek AS, Sauer J, Thygesen MB, Duus JO, Petersen BO, Thirup S, James EK, Jensen KJ, Stougaard J, Radutoiu S. 2010. Improved characterisation of nod factors and genetically based variation in LysM receptor domains identify amino acids expendable for nod factor recognition in Lotus spp.. Molecular Plant-Microbe Interactions. 23:58-66.

Griffiths BS, Ball BC, Daniell TJ, Hallett PD, Neilson R, Wheatley RE, Osler G, Bohanec M. 2010. Integrating soil quality changes to arable agricultural systems following organic matter addition, or adoption of a ley-arable rotation. Applied Soil Ecology. 46:43-53.

Helliwell RC, Britton AJ, Gibbs S, Fisher JM, Potts JM. 2010. Interactive effects of N deposition, land management and weather patterns on soil solution chemistry in a Scottish alpine heath. Ecosystems. 13:696-711.

Faisal A, Dondelinger F, Husmeier D, Beale CM. 2010. Interring species interaction networks from species abundance data: A comparative evaluation of various statistical and machine learning methods. Ecological Informatics. 5:451-464.

Bilton MC, Whitlock R, Grime JP, Marion G, Pakeman RJ. 2010. Intraspecific trait variation in grassland plant species reveals fine-scale strategy trade-offs and size differentiation that underpins performance in ecological communities. Botany-Botanique. 88:939-952.

Raczynska KD, Simpson CG, Ciesiolka A, Szewc L, Lewandowska D, McNicol JW, Szweykowska-Kulinska Z, Brown JWS, Jarmolowski A. 2010. Involvement of the nuclear cap-binding protein complex in alternative splicing in Arabidopsis thaliana.. Nucleic Acids Research. 38:265-278.

Taliansky ME, Brown JWS, Rajam ML, Valkonen JPT, Kalinina NO. 2010. Involvement of the plant nucleolus in virus and viroid infections: Parallels with animal pathosystems. Advances in Virus Research. 77:119-158.

Flynn KJ, Raven JA, Rees TAV, Finkel ZV, Quigg A, Beardall J. 2010. Is the growth rate hypothesis applicable to microalgae? Journal of Phycology. 46:1-12.

Magurran AE, Baillie SR, Buckland ST, Dick JM, Elston DA, Scott EM, Smith RI, Somerfield PJ, Watt AD. 2010. Long-term datasets in biodiversity research and monitoring: assessing change in ecological communities through time. Trends in Ecology and Evolution. 25:574-582.

Blum M, Boehler M, Randall E, Young V, Csukai M, Kraus S, Moulin F, Scalliet G, Avrova AO, Whisson SC et al.. 2010. Mandipropamid targets the cellulose synthase-like PiCesA3 to inhibit cell wall biosynthesis in the oomycete plant pathogen, Phytophthora infestans. Molecular Plant Pathology. 11:227-243.

Rhind SM, Kyle CE, Mackie C, McDonald L, Zhang Z, Duff EI, Bellingham M, Amezaga MR, Mandon-Pepin B, Loup B et al.. 2010. Maternal and fetal tissue accumulation of selected endocrine disrupting compounds (EDC) following exposure to sewage sludge-treated pastures before or after conception. Journal of Environmental Monitoring. 12:1582-1593.

Dixon ER, Blackwell MSA, Dhanoa MS, Berryman Z, de la Fuente Martinez N, Junquera D, Martinez A, Murray PJ, Kemp HF, Meier-Augenstein W et al.. 2010. Measurement at the field scale of soil . Rapid Communications in Mass Spectrometry. 24:511-518.

Campbell R, Ducreux LJM, Morris WL, Morris JA, Suttle JC, Ramsay G, Bryan GJ, Hedley PE, Taylor MA. 2010. The metabolic and developmental roles of cartotenoid cleavage dioxygenase 4 from potato. Plant Physiology. 154:656-664.

Sanchez SE, Petrillo E, Beckwith EJ, Zhang X, Rugnone ML, Hernando CE, Cuevas JC, Godoy Herz MA, Depetris-Chauvin A, Simpson CG et al.. 2010. A methyl transferase links the circadian clock to the regulation of alternative splicing. Nature. 468:112-116.

Castillo NRF, Reed BM, Graham J, Fern F, Bassil NV. 2010. Microsatellite markers for raspberry and blackberry. Journal of the American Society for Horticultural Science. 135:271-278.

Madsen LH, Tirichine L, Jurkiewicz A, Sullivan JT, Heckmann AB, Bek AS, Ronson CW, James EK, Stougaard J. 2010. The molecular network governing nodule organogenesis and infection in the model legume Lotus japonicus. Nature Communications. 1:-10.

Clayton SJ, Clegg CD, Bristow AW, Gregory PJ, Headon DM, Murray PJ. 2010. Movement of newly assimilated 13C carbon in the grass Lolium perenne and its incorporation into rhizosphere microbial DNA. Rapid Communications in Mass Spectrometry. 24:535-540.

Hackett CA, Russell JR, Jorgensen L, Gordon SL, Brennan RM. 2010. Multi-environment QTL mapping in blackcurrant (Ribes nigrum L.) using mixed models. Theoretical and Applied Genetics. 121:1483-1488.

Dos Reis J FB, Simon MF, Gross E, Boddey RM, Elliott GN, Neto NE, Loureiro MdeF, de Queiroz LP, Scotti MR, Chen W-M et al.. 2010. Nodulation and nitrogen fixation by Mimosa spp. in the Cerrado and Caatinga biomes of Brazil. New Phytologist. 186:934-946.

Mostowfizadeh-Ghalamfarsa R, Panabi F, Banihashemi Z, Cooke DEL. 2010. Phylogenetic relationship of Phytophthora cryptogea Pethybr. & Laff and P. drechsleri Tucker. Fungal Biology. 114:325-339.

Duarte IM, De Almeida MTM, Brown DJF, Marques I, Neilson R, Decraemer W. 2010. Phylogenetic relationships, based on SSU rDNA sequences, among the didelphic genera of the family Trichodoridae from Portugal. Nematology. 12:171-180.

Berry P, Spink J, Foulkes J, White PJ. 2010. The physiological basis of genotypic differences in nitrogen use efficiency in oilseed rape (Brassica napus L.). Field Crops Research. 119:365-373.

Bos JIB, Armstrong MR, Gilroy EM, Boevink P, Hein I, Taylor RM, Tian ZD, Engelhardt S, Vetukuri RR, Harrower BE et al.. 2010. Phytophthora infestans effector AVR3a is essential for virulence and manipulates plant immunity by stabilizing host E3 ligase CMPG1. Proceedings of the National Academy of Sciences, USA. 107:9909-9914.

Finkel ZV, Beardall J, Flynn KJ, Quigg A, Rees TAV, Raven JA. 2010. Phytoplankton in a changing world: Cell size and elemental stoichiometry. Journal of Plankton Research. 32:119-137.

Bengough AG, Hans J, Bransby MF, Valentine TA. 2010. PIV as a method for quantifying root cell growth and particle displacement in confocal images. Microscopy Research and Technique. 73:27-36. Abstract

Lambers H, Brundett MC, Raven JA, Hopper SD. 2010. Plant mineral nutrition in ancient landscapes: high plant species diversity on infertile soils is linked to functional diversity for nutritional strategies. Plant and Soil. 334:11-31.

White PJ, Brown PH. 2010. Plant nutrition for sustainable development and global health. Annals of Botany. 105:1073-1080.

Kim S-H, Spensley M, Choi SK, Calixto CPG, Pendle AF, Koroleva O, Shaw PJ, Brown JWS. 2010. Plant U13 orthologues and orphan snoRNAs identified by RNomics of RNA from Arabidopsis nucleoli. Nucleic Acids Research. 38:3054-3067.

Lankau RA, Wheeler E, Bennett AE, Strauss SY. 2010. Plant-soil feedbacks contribute to an intransitive competitive network that promotes both genetic and species diversity. Journal of Ecology. 99:176-185.

Loades KW, Bengough AG, Bransby MF, Hallett PD. 2010. Planting density influence on fibrous root reinforcement of soils. Ecological Engineering. 36:276-284. Abstract

Brulisauer F, Lewis FI, Ganser AG, McKendrick IJ, Gunn GJ. 2010. The prevalence of bovine viral diarrhoea virus infection in beef suckler herds in Scotland. Veterinary Journal. 186:226-231.

Hotchkiss EJ, Dagleish MP, Willoughby K, McKendirck IJ, Finlayson J, Zadoks RN, Newsome E, Brulisauer F, Gunn GJ, Hodgson JC. 2010. Prevalence of Pasteurella multocida and other respiratory pathogens in the nasal tract of Scottish calves. Veterinary Record. 167:555-560.

Gill CIR, McDougall GJ, Glidewell SM, Stewart D, Shen Q, Tuohy K, Dobbin A, Boyd A, Brown E, Haldar S et al.. 2010. Profiling of phenols in human faecal water after raspberry supplementation. Journal of Agricultural and Food Chemistry. 58:10389-10395.

Rotariu O, Smith-Palmer A, Cowden J, Bessell PR, Innocent GT, Reid SWJ, Matthews L, Dallas J, Ogden ID, Forbes KJ et al.. 2010. Putative household outbreaks of campylobacteriosis typically comprise single MLST genotypes. Epidemiology and Infection. 138:1744-1747.

Vollsnes A, Futsaether CM, Bengough AG. 2010. Quantifying rhizosphere particle movement around mutant maize roots using time-lapse imaging and particle image velocimetry. European Journal of Soil Science. 61:926-939.

Robinson G, Wright S, Elwin K, Hadfield SJ, Katzer F, Bartley PM, Hunter PR, Nath M, Innes EA, Chalmers RM. 2010. Re-description of Cryptosporidium cuniculus Inman and Takeuchi 1979 (Apicomplexa:Cryptosporidiidae): morphology, biology and phylogeny. International Journal for Parasitology. 40:1539-1548.

Oliva R, Win J, Raffaele S, Boutemy L, Bozkurt TO, Chaparro-Garcia A, Segretin ME, Stam R, Schornack S, Cano LM et al.. 2010. Recent developments in effector biology of filamentous plant pathogens. Cellular Microbiology. 12:705-715.

Beale CM, Lennon JJ, Yearsley JM, Brewer MJ, Elston DA. 2010. Regression analysis of spatial data. Ecology Letters. 13:246-264.

Simpson CG, Manthri S, Raczynska KD, Kalyna M, Lewandowska D, Kusenda B, Maronova M, Szweykowska-Kulinska Z, Jarmolowski A, Barta A et al.. 2010. Regulation of plant gene expression by alternative splicing. Biochemical Society Transactions. 38:667-671.

Lees AK, Brierley JL, Stewart JA, Hilton AJ, Wale SJ, Gladders P, Bradshaw NJ, Peters JC. 2010. Relative importance of seed-tuber and soilborne inoculum in causing black dot disease of potato. Plant Pathology. 59:693-702.

Vittoz P, Bayfield N, Brooker R, Elston DA, Duff EI, Theurillat JP, Guisan A. 2010. Reproducibility of species lists, visual cover estimates and frequency methods for recording high-mountain vegetation. Journal of Vegetation Science. 21:1035-1047.

Mickovski SB, Bransby MF, Bengough AG, Davies MCR, Hallett PD. 2010. Resistance of simple plant root systems to uplift loads. Canadian Geotechnical Journal. 47:78-95. Abstract

Dupuy L, Gregory PJ, Bengough AG. 2010. Root growth models: Towards a new generation of continuous approaches. Journal of Experimental Botany. 61:2131-2143.

K A, Kuiper HA, Marvin HJP, Boon PE, Busk L, Cnudde FC, Cope S, Davies HV, Dreyer M, Frewer LJ et al.. 2010. The SAFE FOODS framework for improved risk analysis of foods. Food Control. 21:1566-1587.

Broadley MR, Alcock J, Alford J, Cartwright P, Foot I, Fairweather-Tait SJ, Hart DJ, Hurst R, Knott P, McGrath SP et al.. 2010. Selenium biofortification of high-yielding winter wheat (Triticum aestivum L.) by liquid or granular Se fertilisation. Plant and Soil. 332:5-18.

Broadley MR, O'Lochlainn S, Hammond JP, Bowen HC, Cakmak I, Eker S, Erdem H, King GJ, White PJ. 2010. Shoot zinc (Zn) concentration varies widely within Brassica oleracea L. and is affected by soil Zn and phosphorus (P) levels. Journal of Horticultural Science & Biotechnology. 85:375-380.

Bingham IJ, Bengough AG, Rees RM. 2010. Soil compaction - N interactions in barley: Root growth and tissue composition. Soil and Tillage Research. 106:241-246.

Stroud JL, Broadley MR, Foot I, Fairweather-Tait SJ, Hart DJ, Hurst R, Knott P, Mowat H, Norman K, Scott P et al.. 2010. Soil factors affecting selenium concentration in wheat grain and the fate and speciation of Se fertilisers applied to soil. Plant and Soil. 332:19-30.

Hodgson JG, Sharafi M, Jalili A, Diaz S, Montserrat-Marti G, Palmer C, Cerabolini B, Pierce S, Hamzehee B, Asri Y et al.. 2010. Stomatal vs. genome size in angiosperms: The somatic tail wagging the genomic dog? Annals of Botany. 105:573-584.

Tetzlaff D, Brewer MJ, Malcolm IA, Soulsby C. 2010. Storm flow and baseflow response to reduced acid deposition - using Bayesian compositional analysis in hydrograph separation with changing end members. Hydrological Processes. 24:2300-2312.

Iannetta PPM, Begg GS, Valentine TA, Wishart J. 2010. Sustainable disease control using weeds as indicators: Capsella bursa pastoris and Tobacco Rattle Virus. Weed Research. 50:511-514.

Milne I, Bayer M, Cardle L, Shaw P, Stephen G, Wright F, Marshall DF. 2010. Tablet - next generation sequence assembly visualization. Bioinformatics. 26:401-402.

Grouffaud S, Whisson SC, Birch PRJ, van West P. 2010. Towards an understanding of how RxLR-effector proteins are translocated from oomycetes into host cells. Fungal Genetics Reviews. 24:27-36.

Ballingall KT, Rocchi M, McKeever DJ, Wright F. 2010. Trans-species polymorphism and selection in the MHC class II DRA genes of domestic sheep. PLoS One. 5:-e11402.

Zhang K, Greenwood DJ, Spracklen WP, Rahn CR, Hammond JP, White PJ, Burns IG. 2010. A universal agro-hydrological model for water and nitrogen cycles in the soil-crop system SMCR_N: Critical update and further validation. Agricultural Water Management. 97:1411-1422.

Shepherd LVT, Bradshaw JE, Dale MFB, McNicol JW, Pont SDA, Mottram DS, Davies HV. 2010. Variation in acrylamide producing potential in potato: Segregation of the trait in a breeding population. Food Chemistry. 123:568-573.

Waugh R, Marshall DF, Thomas WTB, Comadran J, Russell JR, Close T, Stein N, Hayes P, Muehlbauer G, Cockram J et al.. 2010. Whole-genome association mapping in elite inbred crop varieties. Genome. 53:967-972.

Pearce ISK, Britton AJ, Armitage HF, Jones B. 2010. Additive impacts of nitrogen deposition and grazing on a mountain moss-sedge heath. Botanica Helvetica.. 120(2):129-137.

Shand CA, Balsam M, Hillier SJ, Hudson G, Newman G, Arthur JR, Nicol F. 2010. Aqua regia extractable selenium contents of some Scottish topsoils measured by ICP-MS and the relationship with mineral and organic components. Journal of the Science of Food and Agriculture. 90(6):972-980.

Lennon JJ, Beale CM, Reid CL, Kent M, Pakeman RJ. 2010. Are richness patterns of common and rare species equally well explained by environmental variables? Ecography. 34(4):529-539.

Burgess PJ, Moffat AJ, Matthews RB. 2010. Assessing climate change causes, risks and opportunities in forestry. Outlook on Agriculture. 39(4):263-268.

Balana BB, Mathijs E, Muys B. 2010. Assessing the sustainability of forest management: an application of multi-criteria decision analysis to community forests in northern Ethiopia. Journal of Environmental Management. 91:1294-1304.

Birkel CB, Dunn SM, Tetzlaff DT, Soulsby CS. 2010. Assessing the value of high-resolution isotope tracer data in the stepwise development of a lumped conceptual rainfall-runoff model. Hydrological Processes. 24(16):2335-2348.

Lazar A, Butterfield D, Futter MN, Rankinen K, Thouvenot-Korpoo M, Jarrit N, Lawrence DSL, Wade AJ, Whitehead PG. 2010. An assessment of the fine sediment dynamics in an upland river system: INCA-Sed modifications and implications for fisheries. The Science of the Total Environment. 408(12):2555-2566.

Bontemps C, Elliott GN, Simon MF, dos, Reis J, F.B, Gross E, Neto NE, de Loureiro MF, de Faria SM, Sprent JI et al.. 2010. Burkholderia species are ancient symbionts of legumes. Molecular Ecology. 19(1):44-52.

Hanson S, Nicholls RJ, Balson P, Brown I, French JR, Spencer T. 2010. Capturing coastal geomorphological change within regional integrated assessment: an outcome-driven fuzzy logic approach. Journal of Coastal Research. 26(5):831-842.

Farmer JG, Eades LJ, Graham MC, Cloy JM, Bacon JR. 2010. A comparison of the isotopic composition of lead in rainwater, surface vegetation and tree bark at the long-term monitoring site, Glensaugh, Scotland in 2007. The Science of the Total Environment. 408(17):3704-3710.

Smith P, Bhogal P, Edgington P, Black H, Lilly A, Barraclough D, Worrall F, Hillier J, Merrington G. 2010. Consequences of feasible future agricultural land use change on soil organic carbon stocks and greenhouse gas emissions in Great Britain. Soil Use and Management. 26(4):381-398.

Marshall K, Blackstock KL, Dunglinson J. 2010. A contextual framework for understanding good practice in integrated catchment management. Journal of Environmental Planning and Management. 53(1):63-89.

Baker KL, Marshall S, Nicol GW, Campbell CD, Nicollier G, Ricketts D, Killham K, Prosser JI. 2010. Degradation of metalaxyl M in contrasting soils is influenced more by differences in physicochemical characteristics than in microbial community composition after reinoculation of sterilised soils. Soil Biology and Biochemistry.. 42(7):1123-1131.

MacLeod M, Moran D, Eory V, Rees RM, Barnes A, Topp CFE, Ball B, Hoad S, Wall E, McVittie A et al.. 2010. Developing greenhouse gas marginal abatement cost curves for agricultural emissions from crops and soils in the UK. Agricultural Systems. 103(4):198-209.

Curry N, Brown KM. 2010. Differentiating outdoor recreation: evidence drawn from national surveys in Scotland. Journal of Policy Research in Tourism, Leisure and Events. 2(1):29-50.

Rhind SM, Evans NP, Bellingham M, Sharpe RM, Cotinot C, Mandon-Pepin B, Loup B, Sinclair KD, Lea RG, Pocar P et al.. 2010. Effects of environmental pollutants on the reproduction and welfare of ruminants. Animal. 4(7):1227-1239.

Nielsen UN, Osler GHR, Campbell CD, Neilson R, Burslem DFRP, van der Wal R. 2010. The enigma of soil animal species diversity revisited: the role of small-scale heterogeneity. PLoS ONE. 5(7):e11567.

Silvertown J, Tallowin J, Stevens C, Power SA, Morgan V, Emmett B, Hester AJ, Grime P, Morecroft M, Buxton R et al.. 2010. Environmental myopia: a diagnosis and a remedy. Trends in Ecology and Evolution. 25(10):556-561.

Smith J, Gottschalk P, Bellarby J, Chapman SJ, Lilly A, Towers W, Bell J, Coleman K, Nayak D, Richards M et al.. 2010. Estimating changes in Scottish soil carbon stocks using ECOSSE. I. Model description and uncertainties. Climate Research. 45:179-192.

Bellingham M, Fowler PA, Amezaga MR, Whitelaw CM, Rhind SM, Cotinot C, Mandon-Pepin B, Sharpe RM, Evans NP. 2010. Foetal hypothalamic and pituitary expression of GnRH and galanin systems is disturbed by exposure to sewage sludge chemicals via maternal ingestion. Journal of Neuroendocrinology. 22(6):527-533.

Reed MS, Bonn A, Slee W, Beharry-Borg N, Birch J, Brown I, Burt TP, Chapman D, Chapman PJ, Clay G et al.. 2010. The future of the uplands. Land Use Policy.. Suppl.1:S204-S216.

Ross LC, Woodin SJ, Hester AJ, Thompson DBA, Birks HJB. 2010. How important is plot relocation accuracy when interpreting re-visitation studies of vegetation change? Plant Ecology and Diversity. 3(1):1-8.

McDonnell JJ, McGuire K, Aggarwal KP, Beven K, Biondi D, Destouni G, Dunn S, James A, Kirchner J, Kraft P et al.. 2010. How old is the streamwater? Open questions in catchment transit time conceptualization, modelling and analysis Hydrological Processes. 24(12):1745-1754.

Tetzlaff D, Soulsby C, Birkel C. 2010. Hydrological connectivity and microbiological fluxes in montane catchments: the role of seasonality and climatic variability. Hydrological Processes. 24(9):1231-1235.

Sutherland WJ, Albon SD, Allison H, Armstrong-Brown S, Bailey MJ, Bereton T, Boyd IL, Carey P, Edwards J, Gill M et al.. 2010. The identification of priority opportunities for UK nature conservation policy. Journal of Applied Ecology. 47(5):955-965.

Liu S, Butler D, Memon FA, Makropoulos C, Avery LM, Jefferson B. 2010. Impacts of residence time during storage on potential of water saving for grey water recycling system. Water Research. 44(1):267-277.

Faisal A, Dondelinger F, Husmeier D, Beale CM. 2010. Inferring species interaction networks from species abundance data: A comparative evaluation of various statistical and machine learning methods. Ecological Informatics. 5(6):451-464.

Sebert SP, Hyatt MA, Chan LLY, Yiallourides M, Fainberg HP, Patel N, Sharkey D, Stephenson T, Rhind SM, Bell RC et al.. 2010. Influence of prenatal nutrition and obesity on tissue specific fat mass and obesity-associated (FTO) gene expression. Reproduction. 139(1):265-274.

Nielsen UN, Osler GHR, Campbell CD, van der Wal R, Burslem DFRP. 2010. The influence of vegetation type, soil properties and precipitation on the composition of soil mite and microbial communities at the landscape scale. Journal of Biogeography. 37(7):1317-1328.

Griffiths BS, Ball BC, Daniell TJ, Hallett PD, Neilson R, Wheatley RE, Osler GHR, Bohanec M. 2010. Integrating soil quality changes to arable agricultural systems following organic matter addition, or adoption of a ley-arable rotation. Applied Soil Ecology. 46(1):43-53.

Pilgrim ES, Macleod CJA, Blackwell MSA, Bol R, Hogan DV, Chadwick DR, Cardenas L, Misselbrook TH, Haygarth PM, Brazier RE et al.. 2010. Interactions among agricultural production and other ecosystem services delivered from European temperate grassland systems. Advances in Agronomy. 109:117-154.

Helliwell RC, Britton AJ, Gibbs S, Fisher JM, Potts JM. 2010. Interactive effects of nitrogen deposition, land management and weather on soil solution chemistry in a Scottish low-alpine heath. Ecosystems. 13(5):696-711.

Atickem A, Williams S, Bekele A, Thirgood SJ. 2010. Livestock predation in the Bale Mountains, Ethiopia. African Journal of Ecology. 48(4):1076-1082.

Singh BK, Bardgett R, Smith P, Reay D. 2010. Microorganisms and climate change: terrestrial feedbacks and mitigation options. Nature Reviews Microbiology. 8(11):779-790.

Pillot MH, Gautrais J, Gouello J, Michelena P, Sibbald AM, Bon R. 2010. Moving together: Incidental leaders and naive followers. Behavioural Processes. 83(3):225-241.

Papanikolaou N, Britton AJ, Helliwell RC, Johnson D. 2010. Nitrogen deposition, vegetation burning and climate warming act independently on microbial community structure and enzyme activity associated with decomposing litter in low-alpine heath. Global Change Biology. 16(11):3120-3132.

dos, Reis J, F, Simon M, Gross E, Boddey R, Elliott GN, Loureiro M, de Queiroz L, Chen WM, Bontemps C et al.. 2010. Nodulation and nitrogen fixation by mimosa spp. In the Cerrado and Caatinga biomes of Brazil. New Phytologist. 186(4):934-946.

Grimm V, Berger U, DeAngelis DL, Polhill JG, Giske J, Railsback SF. 2010. The ODD protocol for describing individual-based and agent-based models: A first update. Ecological Modelling. 221(23):2760-2768.

Moore BD, Lawer IR, Wallis IR, Beale CM, Foley WJ. 2010. Palatability mapping: a koala's eye view of spatial variation in habitat quality. Ecology. 91(11):3165-3176.

Msoffe F, Ogoto J, Bedelian C, Said M, Kifugo S, Reid R, Kaaya J, Neselle M, van Gardingen P, Thirgood SJ. 2010. Participatory wildlife surveys in communal lands: a case study from Simanjiro, Tanzania. African Journal of Ecology. 8(3):727-735.

Senn HV, Swanson GM, Goodman SJ, Barton NH, Pemberton JM. 2010. Phenotypic correlates of hybridisation between red and sika deer (genus Cervus). Journal of Animal Ecology. 79(2):414-425.

Turner TL, Bourne EC, von Wettberg EJ, Hu T, Nuzhdin SV. 2010. Population resequencing reveals local adaptation of Arabidopsis lyrata to serpentine soils. Nature Genetics. 42:260-U42.

Beechie TJ, Sear DA, Olden JD, Pess GR, Buffington JM, Moir HJ, Roni P, Pollock MM. 2010. Process-based principles for restoring river ecosystems. BioScience. 60(3):209-222.

Hogberg MN, Briones MJI, Keel SG, Metcalfe DB, Campbell C, Midwood AJ, Thornton B, Hurry V, Linder S, Nasholm T et al.. 2010. Quantification of effects of season and nitrogen supply on tree belowground carbon transfer. New Phytologist. 187(2):485-493.

Millard P, Midwood AJ, Hunt JE, Barbour MM, Whitehead D. 2010. Quantifying the contribution of soil organic matter turnover to forest soil respiration using natural abundance delta 13C. Soil Biology and Biochemistry. 42(6):935-943.

Matthews KB, Rivington M, Blackstock KL, McCrum G, Buchan K, Miller DG. 2010. Raising the bar? The challenge of evaluating the outcomes of environmental modelling and software Environmental Modelling and Software. 26(3):247-257.

Beale CM, Lennon JJ, Yearsley JM, Brewer MJ, Elston DA. 2010. Regression analysis of spatial data. Ecology Letters. 13(2):246-264.

Milns I, Beale CM, Smith VA. 2010. Revealing ecological networks using Bayesian network inference algorithms. Ecology. 91(7):1892-1899.

Fominai M, Burford EP, Hillier S, Kierans M, Gadd GM. 2010. Rock building fungi. Geomicrobiology Journal. 27(6-7):624-629.

Robinson D, Trinder C, Davidson H, Brooker RW. 2010. Root-shoot growth responses during interspecific competition quantified using allometric modelling. Annals of Botany. 106(6):921-926.

Castellazzi MS, Matthews J, Angevin F, Wood GA, Burgess PJ, Brown I, Conrad KF, Perry PN. 2010. Simulation scenarios of spatio-temporal arrangement of crops at the landscape scale. Environmental Modelling and Software. 25(12):1881-1889.

Poggio L, Gimona A, Brown I, Castellazzi MS. 2010. Soil available water capacity interpolation and spatial uncertainty modelling at multiple geographical extents. Geoderma. 160(2):175-188.

Alexandrov GA, Ames D, Aumann C, Bellocchi G, Bruen M, Crout N, Erechtchoukova M, Hildebrandt A, Hoffman F, Jackisch C et al.. 2010. Technical assessment and evaluation of environmental models and software: Letter to the Editor. Environmental Modelling and Software. 26(3):328-336.

Britton AJ, Fisher JM. 2010. Terricolous alpine lichens are sensitive to both load and concentration of applied nitrogen and have potential as bioindicators of nitrogen deposition. Environmental Pollution. 158(5):1296-1302.

Kikvidze Z, Brooker RW. 2010. Towards a more exact definition of the importance of competition - a reply to Freckleton et al. (2009). Journal of Ecology. 98(4):719-724.

Birkel CB, Tetzlaff D, Soulsby C, Dunn SM. 2010. Towards a simple dynamic process conceptualization in rainfall runoff models using multi-criteria calibration and tracers in temperate, upland catchments. Hydrological Processes.. 24(3):260-275.

Dunn SM, Birkel C, Tetzlaff D, Soulsby C. 2010. Transit time distributions of a conceptual model: their characteristics and sensitivities. Hydrological Processes. 24(12):1719-1729.

Phillip S, Hunter C, Blackstock KL. 2010. A typology for defining agritourism. Tourism Management. 31(6):754-758.

Troldborg M, Nowak W, Tuxen N, Bjerg PL, Helmig R, Binning PJ. 2010. Uncertainty evaluation of mass discharge estimates from a contaminated site using a fully Bayesian framework. Water Resources Research. 46(W12552)

Blackstock KL, Ingram J, Burton R, Mills J, Brown KM, Slee B. 2010. Understanding and influencing behaviour change by farmers to improve water quality. The Science of the Total Environment. Published online. 408(23):5631-5638.

Teel T, Manfredo M, Jensen FS, Buijs A, Fischer A, Riepe C, Arlinghaus R, Jacobs M. 2010. Understanding the cognitive basis for human-wildlife relationships. International Journal of Sociology. 40:104-123.

Belocchi G, Rivington M, Donatelli M, Matthews KB. 2010. Validation of biophysical models: issues and methodologies. A review. Agronomy for Sustainable Development.. 30(1):109-130.

Bellocchi G, Rivington M, Donatelli M, Matthews KB. 2010. Validation of biophysical models: issues and methodologies: a review. In: Sustainable Farming Systems, Springer Sciencce. 30:109-130.

2009

Kim S-H, Koroleva OA, Lewandowska D, Pendle AF, Clark GP, Simpson CG, Shaw PJ, Brown JWS. 2009. Aberrant mRNA transcripts and the nonsense-mediated decay proteins UPF2 and UPF3 are enriched in the Arabidopsis nucleolus. Plant Cell. 21:2045-2057.

Russell JR, Kadu CAC, Jamnadass R, Booth A, Cordeiro NJ, Woodhead M, Dawson IK. 2009. AFLP and SSR diversity in the African fruit tree Allanblackia: implications for management of a genus newly subject to domestication for the edible oil industry. Tree Genetics and Genomes. 5:517-527.

Beardall J, Allen D, Bragg J, Finkel ZV, Flynn KJ, Quigg A, Rees TAV, Richardson A, Raven JA. 2009. Allometry and stoichiometry of unicellular, colonial and multicellular phytoplankton. New Phytologist. 181:295-309.

Antunez-Lamas M, Cabrera E, Lopez-Solanilla E, Solano R, Gonzalez-Melendi P, Chico JM, Toth IK, Birch PRJ, Pritchard L, Liu H et al.. 2009. Bacterial chemoattraction towards jasmonate plays a role in the entry of Dickeya dadantii through wounded tissues. Molecular Microbiology. 74:662-671.

Bowen SR, Gregorich EG, Hopkins DW. 2009. Biochemical properties and biodegradation of dissolved organic matter from soils. Biology and Fertility of Soils. 45:733-742. Abstract

White PJ, Broadley MR. 2009. Biofortification of crops with seven mineral elements often lacking in human diets - iron, zinc, copper, calcium, magnesium, selenium and iodine (Review). New Phytologist. 182:49-84. Abstract

Woodward FI, Bardgett RD, Raven JA, Hetherington AM. 2009. Biological approaches to global environmental change: mitigation and remediation. Current Biology. 19:R615-R623.

Subbarao GV, Kishii M, Nakahara K, Ishikawa T, Ban T, Tsujimoto H, George TS, Berry WL, Hash CT, Ito O. 2009. Biological nitrification inhibition (BNI) - Is there potential for genetic interventions in Triticeae? Breeding Science. 59:529-545.

Hudacsek P, Bransby MF, Hallett PD, Bengough AG. 2009. Centrifuge modelling of climatic effects on clay embankments. Proceedings of the Institution of Civil Engineers - Engineering Sustainability. 162:91-100.

Adam MAM, Phillips MS, Tzortzakakis M, Blok VC. 2009. Characterisation of mjap genes encoding novel secreted proteins from the root-knot nematode, Meloidogyne javanica. Nematology. 11:253-265.

Schreiber AWJ, Sutton T, Caldo RA, Kalashyan E, Lovell B, Mayo G, Muehlbauer G, Druka A, Waugh R, Wise RP et al.. 2009. Comparative transcriptomics in the Triticeae. BMC Genomics. 10:-285. Abstract

Barker H, McGeachy KD, Toplak N, Gruden K, Zel J, Browning I. 2009. Comparison of genome sequence of PVY isolates with biological properties. American Journal of Potato Research. 86:227-238.

Squire GR, Hawes C, Begg GS, Young MW. 2009. Cumulative impact of GM herbicide-tolerant cropping on arable plants assessed through species-based and functional taxonomies. Environmental Science and Pollution Research. 16:85-94. Abstract

Cockell CS, L A, Fridlund M, Herbst TM, Kaltenegger L, Absil O, Beichman C, Benz W, Blanc M, Brack A et al.. 2009. Darwin - a mission to detect and search for life on extrasolar planets. Astrobiology. 9:1-22.

McKenzie BM, Bengough AG, Hallett PD, Thomas WTB, Forster BP, McNicol JW. 2009. Deep rooting and drought screening of cereal crops: A novel field-based method and its application.. Field Crops Research. 112:165-171. Abstract

Newton AC, Begg GS, Swanston JS. 2009. Deployment of diversity for enhanced crop function. Annals of Applied Biology. 154:309-322. Abstract

Stokes A, Atger C, Bengough AG, Fourcaud T, Sidle RC. 2009. Desirable plant root traits for protecting natural and engineered slopes against landslides (Invited review). Plant and Soil. 324:1-30.

Close TJ, Bhat PR, Lonardi S, Wu Y, Rostoks N, Ramsay L, Druka A, Stein N, Svensson JT, Wanamaker S et al.. 2009. Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics. 10:-582.

Kopecky D, Bartos J, Lukaszewski AJ, Baird JH, Cernoch V, K R, Rognli OA, Blois H, Caig V, Lubberstedt T et al.. 2009. Development and mapping of DArT markers within the Festuca - Lolium complex. BMC Genomics. 10:-473.

Brennan RM, Jorgensen L, Gordon SL, Loades K, Hackett CA, Russell JR. 2009. The development of a PCR-based marker linked to resistance to the blackcurrant gall mite (Cecidophyopsis ribis Acari: Eriophyidae). Theoretical and Applied Genetics. 118:205-211. Abstract

Bartley PM, Wright SE, Maley SW, Buxton D, Nath M, Innes EA. 2009. The development of immune responses in Balb/c mice following inoculation with attenuated or virulent Neospora caninum tachyzoites. Parasite Immunology. 31:392-401.

Hallett PD, Feeney D, Bengough AG, Rillig MC, Scrimgeour CM, Young IM. 2009. Disentangling the impact of AM fungi versus roots on soil structure and water transport. Plant and Soil. 314:183-196. Abstract

Koroleva OA, Calder G, Pendle AF, Kim S-H, Lewandowska D, Simpson CG, Jones IM, Brown JWS, Shaw PJ. 2009. Dynamic behaviour of Arabidopsis eIF4A-III, putative core protein of exon junction complex: fast relocation to nucleolus and splicing speckles under hypoxia. Plant Cell. 21:1592-1606.

Barr P, McKenzie BM, Hallett PD. 2009. Earthworms bring compacted and loose soils to a similar mechanical state. Soil Biology & Biochemistry. 41:656-658. Abstract

Wookey PA, Aerts R, Bardgett RD, Baptist F, Brathan KA, Cornelissen JHC, Gough L, Hartley IP, Hopkins DW, Lavorerl S et al.. 2009. Ecosystem feedbacks and cascade processes: understanding their role in the responses of Arctic and alpine ecosystems to environmental change. Global Change Biology. 15:1153-1172. Abstract