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2009
Al-Mrabeh A, Ziegler A, Cowan GH, Torrance L.  2009.  A fully recombinant ELISA using in vivo biotinylated antibody fragments for the detection of Potato leaf roll virus. Journal of Virological Methods. 159:200-205.
Haas BJ, Kamoun S, Zody MC, Jiang RHY, Handsaker RE, Cano LM, Grabherr M, Kodira CD, Raffaele S, Torto-Alalibo T et al..  2009.  Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans. Nature. 461:393-398.
Caron-Lormier G, Bohan DA, Hawes C, Raybould A, Haughton AJ, Humphry RW.  2009.  How might we model an ecosystem? Ecological Modelling. 220:1935-1949.
Madsen CT, Stephens J, Hornyik C, Shaw J, Collinge DB, Lacomme C, Albrechtsen M.  2009.  Identification and characterization of barley RNA-directed RNA polymerases. Biochimica et Biophysica Acta. 1789:375-385.
Jones JT, Kumar A, Pylypenko LA, Thirugnanasambandam A, Castelli L, Chapman S, Cock PJA, Grenier E, Lilley CJ, Phillips MS et al..  2009.  Identification and functional characterisation of effectors in expressed sequence tags from various life cycle stages of the potato cyst nematode Globodera pallida. Molecular Plant Pathology. 10:815-828.
Schulte D, Close TJ, Graner A, Langridge P, Matsumoto T, Muehlbauer GJ, Sato K, Schulman AH, Waugh R, Wise RP et al..  2009.  International Barley Sequencing Consortium - at the threshold of efficient access to the barley genome. Plant Physiology. 149:142-147. Abstract
Mahajan A, Currie CG, Mackie S, Tree J, McAteer S, McKendrick I, McNeilly TN, Roe A, La Ragione RM, Woodward MJ et al..  2009.  An investigation of the expression and adhesin function of H7 flagella in the interaction of Escherichia coli O157:H7 with bovine intestinal epithelium. Cellular Microbiology. 11:121-137.
Cousens C, Thonur L, Imlach S, Crawford J, Sales J, Griffiths DJ.  2009.  Jaagsiekte sheep retrovirus is present at high concentration in lung fluid produced by ovine pulmonary adenocarcinoma-affected sheep and can survive for several weeks at ambient temperatures. Research in Veterinary Science. 87:154-156.
Torres-Ca P, Hinojosa MB, Garcia-Ruiz R, Daniell TJ, Carreira JA.  2009.  Linking biogeochemical variability and microbial community structure in forest soils: Abies pinsapo-fir forests as a study case. Ecosistemas. 18:91-102.
Braga RA, Dupuy L, Pasqual M, Cardoso RR.  2009.  Live biospeckle laser imaging of root tissues. European Biophysics Journal. 38:679-686. Abstract
Cummings SP, Gyaneshwar P, Vinuesa P, Farruggia FT, Andrews M, Humphry D, Elliott GN, Nelson A, Orr C, Pettitt D et al..  2009.  Nodulation of Sesbania species by Rhizobium (Agrobacterium) strain IRBG74 and other Rhizobia. Environmental Microbiology. 11:2510-2525.
Comadran J, Thomas WTB, van Eeuwijk FA, Ceccarelli S, Grando S, Stanca AM, Pecchioni N, Akar T, Al-Yassin A, Benbelkacem A et al..  2009.  Patterns of genetic diversity and linkage disequilibrium in a highly structured Hordeum vulgare association-mapping population for the Mediterranean basin. Theoretical and Applied Genetics. 119:175-187.
Lees AK, Sullivan L, Cullen DW.  2009.  A quantitative polymerase chain reaction assay for the detection of Polyscytalum pustulans, the cause of skin spot disease of potato. Journal of Phytopathology. 157:154-158. Abstract
Salse J, Abrouk M, Bolot S, Guilhot N, Courcelle E, Faraut T, Waugh R, Close TJ, Messing J, Feuillet C.  2009.  Reconstruction of monocotyledonous proto-chromosomes reveals faster evolution in plants than in animals. Proceedings of the National Academy of Sciences, USA. 106:14908-14913.
Lewsey M, Surette M, Robertson FC, Ziebell H, Choi SH, Ryu KH, Canto T, Palukaitis P, Payne T, Walsh JA et al..  2009.  The role of the Cucumber mosaic virus 2b protein in viral movement and symptom induction. Molecular Plant-Microbe Interactions. 22:642-654. Abstract
Crampton BG, Hein I, Berger DK.  2009.  Salicylic acid confers resistance to a biotrophic rust pathogen, Puccinia substriata, in pearl millet (Pennisetum glaucum). Molecular Plant Pathology. 10:291-304.
Andrews M, Maule HG, Hodge S, Cherrill A, Raven JA.  2009.  Seed dormancy, nitrogen nutrition and shade acclimation of Impatiens glandulifera: implications for its successful invasion of a deciduous woodland. Plant Ecology and Diversity. 2:145-153.
Visser RGF, Bachem CWB, de Boer JM, Bryan GJ, Chakrabati SK, Feingold S, Gromadka R, van Ham RCHJ, Huang SW, Jacobs JME et al..  2009.  Sequencing the potato genome: Outline and first results to come from the elucidation of the sequence of the world's most important food crop. American Journal of Potato Research. 86:417-429.
Maestre FT, Bowker M, Puche MD, Bowker M, Hinojosa MB, Mart I, Garc P, Castillo AP, Soliveres S, Luzuriaga AL et al..  2009.  Shrub encroachment can reverse desertification in semi-arid Mediterranean grasslands. Ecology Letters. 12:930-941. Abstract
Garc R, Ochoa V, Vi B, Hinojosa MB, Pe R, Li G, Linares JC, Carreira JA.  2009.  Soil enzymes, nematode community and selected physico-chemical properties as soil quality indicators in organic and conventional olive oil farming: influence of seasonality and site features. Applied Soil Ecology. 41:305-314. Abstract
Tyler A, Hunter PD, Carvalho L, Codd GA, Elliott JA, Ferguson CA, Hanley ND, Hopkins DW, Maberly SC, Mearns KJ et al..  2009.  Strategies for monitoring and managing mass populations of toxic cyanobacteria in recreational waters: A multi-interdisciplinary approach. Environmental Health. 8 Supplement 1:-S11.
Pearce MC, Chase-Topping ME, McKendrick IJ, Mellor DJ, Locking ME, Allison L, Ternent HE, Matthews L, Knight HI, Smith AW et al..  2009.  Temporal and spatial patterns of bovine Escherichia coli O157 prevalence and comparison of temporal changes in the patterns of phage types associated with bovine shedding and human E. coli O157 cases in Scotland between 1998-2000 and 2002-2004. BMC Microbiology. 9:-276.
Hurd CL, Hepburn CD, Currie KI, Raven JA, Hunter KA.  2009.  Testing the effects of ocean acidification on algal metabolism: considerations for experimental designs. Journal of Phycology. 45:1236-1251.
Birch PRJ, Armstrong MR, Bos J, Boevink P, Gilroy EM, Taylor RM, Wawra S, Pritchard L, Conti L, Ewan R et al..  2009.  Towards understanding the virulence functions of RXLR effectors of the oomycete plant pathogen Phytophthora infestans (Review). Journal of Experimental Botany. 60:1133-1140.
van Dijk JP, Cankar K, Scheffer SJ, Beenen HGJ, Shepherd LVT, Stewart D, Davies HV, Wilcockson SJ, Leifert C, Gruden K et al..  2009.  Transcriptome analysis of potato tubers - effects of different agricultural practices. Journal of Agricultural and Food Chemistry. 57:1612-1623. Abstract
Torrance L, Lukhovitskaya NI, Schepetilnikov MV, Cowan GH, Ziegler A, Savenkov EI.  2009.  Unusual long-distance movement strategies of Potato mop-top virus RNAs in Nicotiana benthamiana. Molecular Plant-Microbe Interactions. 22:381-390.
Crosley LK, Duthie SJ, Polley AC, Bouwman FG, Heim C, Mulholland F, Horgan GW, Johnson IT, Mariman EC, Elliott RM et al..  2009.  Variation in protein levels obtained from human blood cells and biofluids for platelet, peripheral blood mononuclear cell, plasma, urine and saliva proteomics. Genes and Nutrition. 4:95-102.
2010
Clark JM, Gallego-Sala AV, Allott TEH, Chapman SJ, Farewell T, Freeman C, House JI, Orr HG, Prentice IC, Smith P.  2010.  Assessing the vulnerability of blanket peat to climate change using an ensemble of statistical bioclimatic envelope models. Climate Research. 45:131-150.
Gallego-Sala AV, Clark JM, House JI, Orr HG, Prentice IC, Smith P, Farewell T, Chapman SJ.  2010.  Bioclimatic envelope model of climate change impacts on blanket peatland distribution in Great Britain. Climate Research. 45:151-162.
Conniff A, Craig T, Laing R, Galan-Diaz C.  2010.  A comparison of active navigation and passive observation of desktop models of future built environments. Design Studies. 31(5):419-438.
Farmer JG, Eades LJ, Graham MC, Cloy JM, Bacon JR.  2010.  A comparison of the isotopic composition of lead in rainwater, surface vegetation and tree bark at the long-term monitoring site, Glensaugh, Scotland in 2007. The Science of the Total Environment. 408(17):3704-3710.
Curlevski NJA, Xu Z, Anderson IA, Cairney JWG.  2010.  Converting Australian tropical rainforest to native Araucariaceae plantations alters soil fungal communities. Soil Biology and Biochemistry. 42(1):14-20.
Baker KL, Marshall S, Nicol GW, Campbell CD, Nicollier G, Ricketts D, Killham K, Prosser JI.  2010.  Degradation of metalaxyl M in contrasting soils is influenced more by differences in physicochemical characteristics than in microbial community composition after reinoculation of sterilised soils. Soil Biology and Biochemistry.. 42(7):1123-1131.
Hough RL, Crews C, White D, Driffield M, Campbell CD, Maltin C.  2010.  Degradation of yew, ragwort and rhododendron toxins during composting. The Science of the Total Environment. 408(19):3128-4137.
Curry N, Brown KM.  2010.  Differentiating outdoor recreation: evidence drawn from national surveys in Scotland. Journal of Policy Research in Tourism, Leisure and Events. 2(1):29-50.
Mitchell RJ, Campbell CD, Chapman SJ, Cameron CM.  2010.  The ecological engineering impact of a single tree species on the soil microbial community. Journal of Ecology. 98(1):50-61.
Rhind SM, Evans NP, Bellingham M, Sharpe RM, Cotinot C, Mandon-Pepin B, Loup B, Sinclair KD, Lea RG, Pocar P et al..  2010.  Effects of environmental pollutants on the reproduction and welfare of ruminants. Animal. 4(7):1227-1239.
Nielsen UN, Osler GHR, Campbell CD, Neilson R, Burslem DFRP, van der Wal R.  2010.  The enigma of soil animal species diversity revisited: the role of small-scale heterogeneity. PLoS ONE. 5(7):e11567.
Smith J, Gottschalk P, Bellarby J, Chapman SJ, Lilly A, Towers W, Bell J, Coleman K, Nayak D, Richards M et al..  2010.  Estimating changes in Scottish soil carbon stocks using ECOSSE. I. Model description and uncertainties. Climate Research. 45:179-192.
Smith J, Gottschalk P, Bellarby J, Chapman SJ, Lilly A, Towers W, Bell J, Coleman K, Nayak D, Richards M et al..  2010.  Estimating changes in Scottish soil carbon stocks using ECOSSE. II. Application. Climate Research. 45:179-192.
Bellingham M, Fowler PA, Amezaga MR, Whitelaw CM, Rhind SM, Cotinot C, Mandon-Pepin B, Sharpe RM, Evans NP.  2010.  Foetal hypothalamic and pituitary expression of GnRH and galanin systems is disturbed by exposure to sewage sludge chemicals via maternal ingestion. Journal of Neuroendocrinology. 22(6):527-533.
Reed MS, Bonn A, Slee W, Beharry-Borg N, Birch J, Brown I, Burt TP, Chapman D, Chapman PJ, Clay G et al..  2010.  The future of the uplands. Land Use Policy.. Suppl.1:S204-S216.
Lin G, Ci HX, Thirgood, S.J.; Redpath S, Zhang TZ, Su JP.  2010.  Genetic variation and molecular evolution of endangered Kozlov's pika (Ochotona Koslowi Buchner) based on mitochondrial cytochrome B gene. Polish Journal of Ecology. 58(3):563-568.
Clements MN, Clutton-Brock TH, Albon SD, Pemberton LKJMEB.  2010.  Getting the timing right: antler growth phenology and sexual selection in a wild red deer population. Oecologia. 164:357-368.
Sutherland WJ, Albon SD, Allison H, Armstrong-Brown S, Bailey MJ, Bereton T, Boyd IL, Carey P, Edwards J, Gill M et al..  2010.  The identification of priority opportunities for UK nature conservation policy. Journal of Applied Ecology. 47(5):955-965.
Sayan Y, Ozkul H, Polat M, Capci T, Orskov ER.  2010.  In situ degradation characteristics as predictors of in vivo digestibility and metabolizable energy values of forages and wheat straw. Journal of Applied Animal Research. 37(1):77-81.
Walker DM, Carmeli C, Perez-Barberia FJ, Small M, Perez-Fernandez E.  2010.  Inferring networks from multivariate symbolic time series to unravel behavioural interactions among animals. Animal Behaviour. 79(2):351-359.
Sebert SP, Hyatt MA, Chan LLY, Yiallourides M, Fainberg HP, Patel N, Sharkey D, Stephenson T, Rhind SM, Bell RC et al..  2010.  Influence of prenatal nutrition and obesity on tissue specific fat mass and obesity-associated (FTO) gene expression. Reproduction. 139(1):265-274.
Nielsen UN, Osler GHR, Campbell CD, van der Wal R, Burslem DFRP.  2010.  The influence of vegetation type, soil properties and precipitation on the composition of soil mite and microbial communities at the landscape scale. Journal of Biogeography. 37(7):1317-1328.
Pilgrim ES, Macleod CJA, Blackwell MSA, Bol R, Hogan DV, Chadwick DR, Cardenas L, Misselbrook TH, Haygarth PM, Brazier RE et al..  2010.  Interactions among agricultural production and other ecosystem services delivered from European temperate grassland systems. Advances in Agronomy. 109:117-154.
Mitchell RJ, Hester AJ, Campbell CD, Chapman SJ, Cameron CM, Hewison RL, Potts JM.  2010.  Is vegetation composition or soil chemistry the best predictor of the soil microbial community? Plant and Soil. 333(1-2):417-430.
Hough RL, Fletcher T, Leonardi GS, Goessler W, Gnagnarella P, Clemens F, Gurzau E, Koppova K, Rudnai P, Kumar R et al..  2010.  Lifetime exposure to arsenic in residential drinking water in Central Europe. International Archives of Occupational and Environmental Health. 83(5):471-481.
Evans C, Cooper D, Monteith D, Helliwell R, Moldan F, Hall J, Rowe E, Cosby J.  2010.  Linking monitoring and modelling: can long-term datasets be used more effectively as a basis for large-scale prediction? Biogeochemistry. 101(1-3):211-227.
Rhind SM, Kyle CE, Mackie C, McDonald L, Zhang Z, Duff EI, Bellingham M, Amezaga MR, Mandon-Pepin B, Loup B et al..  2010.  Maternal and fetal tissue accumulation of selected endocrine disrupting compounds (EDC) following exposure to sewage sludge-treated pastures before or after conception. Journal of Environmental Monitoring. 12:1582-1593.
Sproston EL, Ogden ID, MacRae M, Forbes KJ, Dallas JF, Sheppard SK, Cody A, Colles F, Wilson MJ, Strachan NJC.  2010.  Multi-locus sequence types of Campylobacter carried by flies and slugs acquired from local ruminant faeces. Journal of Applied Microbiology. 109(3):829-838.
dos, Reis J, F, Simon M, Gross E, Boddey R, Elliott GN, Loureiro M, de Queiroz L, Chen WM, Bontemps C et al..  2010.  Nodulation and nitrogen fixation by mimosa spp. In the Cerrado and Caatinga biomes of Brazil. New Phytologist. 186(4):934-946.
Hogberg MN, Briones MJI, Keel SG, Metcalfe DB, Campbell C, Midwood AJ, Thornton B, Hurry V, Linder S, Nasholm T et al..  2010.  Quantification of effects of season and nitrogen supply on tree belowground carbon transfer. New Phytologist. 187(2):485-493.
Castellazzi MS, Matthews J, Angevin F, Wood GA, Burgess PJ, Brown I, Conrad KF, Perry PN.  2010.  Simulation scenarios of spatio-temporal arrangement of crops at the landscape scale. Environmental Modelling and Software. 25(12):1881-1889.
Poggio L, Gimona A, Brown I, Castellazzi MS.  2010.  Soil available water capacity interpolation and spatial uncertainty modelling at multiple geographical extents. Geoderma. 160(2):175-188.
Alexandrov GA, Ames D, Aumann C, Bellocchi G, Bruen M, Crout N, Erechtchoukova M, Hildebrandt A, Hoffman F, Jackisch C et al..  2010.  Technical assessment and evaluation of environmental models and software: Letter to the Editor. Environmental Modelling and Software. 26(3):328-336.
Currey PM, Johnson D, Sheppard LJ, Leith ID, Toberman H, van der Wal R, Dawson LA, Artz RRE.  2010.  Turnover of labile and recalcitrant soil carbon differ in response to nitrate and ammonium deposition in an ombrotrophic peatland. Global Change Biology. 16(8):2307-2321.
Salmela MJ, Cavers S, Wachowiak W, Cottrell J, Iason GR, Ennos RA.  2010.  Understanding the evolution of native pinewoods in Scotland will benefit their future management and conservation. Forestry. 83(5):535-545.
Christensen NM, Oparka KJ, Tilsner J.  2010.  Advances in imaging RNA in plants. Trends in Plant Science. 15:196-203.
Kim HW, Kim JB, Chu SM, Kim SY, Kim SN, Cho YS, Cho SM, Baek HJ, Park HJ, Lee DJ et al..  2010.  Analysis of anthocyanin composition and content contained from grains of the Korean purple rice varieties by liquid chromatography with diode array detection and electrospray ionization/mass spectrometry (LC-DAD-ESI/MS). Korean Journal of International Agriculture. 22:267-272.
Schornack S, Van Damme M, Bozkurt TO, Cano LM, Smoker M, Thines M, Gaulin E, Kamoun S, Huitema E.  2010.  Ancient class of translocated oomycete effectors targets the host nucleus. Proceedings of the National Academy of Sciences, USA. 107:17421-17426.
Tavares LR, Fortalezas S, Carrilho C, McDougall GJ, Stewart D, Ferreira RB, Santos CN.  2010.  Antioxidant and antiproliferative properties of strawberry tree tissues. Journal of Berry Research. 1:3-12.
Hallett PD, Lichner L, Cerda A.  2010.  Biohydrology: coupling biology and soil hydrology from pores to landscapes preface. Ecohydrology. 3:379-381.
Hedley PE, Russell JR, Jorgensen L, Gordon S, Morris JA, Hackett CA, Cardle L, Brennan RM.  2010.  Candidate genes associated with bud dormancy release in blackcurrant (Ribes nigrum L.). BMC Plant Biology. 10:-202.
Newton AC, Akar T, Baresel JP, Bebeli PJ, Bettencourt E, Bladenopoulos KV, Czembor JH, Fasoula DA, Katsiotis A, Koutis K et al..  2010.  Cereal landraces for sustainable agriculture. A review (Review). Agronomy for Sustainable Development. 30:237-269.
Mascia T, Cillo F, Fanelli V, Finetti-Sialer MM, De Stradis A, Palukaitis P, Gallitelli D.  2010.  Characterization of the interactions between Cucumber mosaic virus and Potato virus Y in mixed infections in tomato. Molecular Plant-Microbe Interactions. 23:1514-1524.
Chen XY, Daniell TJ, Neilson R, O'Flaherty V, Griffiths BS.  2010.  A comparison of molecular methods for monitoring soil nematodes and their use as biological indicators. European Journal of Soil Science. 46:319-324.
Bartlett MD, Briones MJI, Neilson R, Schmidt O, Spurgeon D, Creamer RE.  2010.  A critical review of current methods in earthworm ecology: From individuals to populations (Review). European Journal of Soil Biology. 46:67-73.
Gonz I, Mart I, Rakitina DV, Lewsey MG, Atencio FA, Llave C, Kalinina NO, Carr JP, Palukaitis P, Canto T.  2010.  Cucumber mosaic virus 2b protein subcellular targets and interactions: Their significance to RNA silencing suppressor activity. Molecular Plant-Microbe Interactions. 23:294-303.
Berdeaux O, Gregoire S, Fournier C, Christie WW, Lambelet P, S JL.  2010.  Detection of lactobacillic acid in low erucic rapeseed oil - A note of caution when quantifying cyclic fatty acid monomers in vegetable oils. Chemistry and Physics of Lipids. 163:698-702.
Chen XW, Niks RE, Hedley PE, Morris J, Druka A, Marcel TC, Vels A, Waugh R.  2010.  Differential gene expression in nearly isogenic lines with QTL for partial resistance to Puccinia hordei in barley. BMC Genomics. 11:-629.
Dagleish MP, Hamilton S, Gonz L, Eaton SL, Steele PJ, Finlayson J, Sis S, Pang YP, Sales J, Chianini F et al..  2010.  Digestion and transportation of bovine spongiform encephalopathy-derived prion protein in the sheep intestine. Journal of General Virology. 91:3116-3123.
Cosentino D, Hallett PD, Michel JC, Chenu C.  2010.  Do different methods for measuring the hydrophobicity of soil aggregates give the same trends in soil amended with residue? Geoderma. 159:221-227.
Moragues M, Comadran J, Waugh R, Milne I, Flavell AJ, Russell JR.  2010.  Effects of ascertainment bias and marker number on estimations of barley diversity from high-throughput SNP genotype data. Theoretical and Applied Genetics. 120:1525-1534.
Nielson UN, Osler GHR, Campbell CD, Neilson R, Burslem DFRP, van der Wal R.  2010.  The enigma of soil animal species diversity revisited: the role of small-scale heterogeneity. PLoS One. 5:-e11567.
Chen XW, Hackett CA, Niks RE, Hedley PE, Booth C, Druka A, Marcel TC, Vels A, Bayer M, Milne I et al..  2010.  An eQTL analysis of partial resistance to Puccinia hordei in barley. PLoS One. 5:-e8598.
Casa R, Baret F, Buis S, Lopez-Lozano R, Pascucci S, Palombo A, Jones HG.  2010.  Estimation of maize canopy properties from remote sensing by inversion of 1-D and 4-D models. Precision Agriculture. 11:319-334.
Cock PJA, Whitworth DE.  2010.  Evolution of relative reading frame bias in unidirectional prokaryotic gene overlaps. Molecular Biology and Evolution. 27:753-756.
Druka A, Franckowiak JD, Lundqvist U, Bonar N, Alexander J, Guzy-Wrobelska J, Ramsay L, Druka I, Grant I, Macaulay M et al..  2010.  Exploiting induced variation to dissect quantitative traits in barley. Biochemical Society Transactions. 38:683-688.
Druka A, Potokina E, Luo ZW, Jiang N, Chen XW, Kearsey MJ, Waugh R.  2010.  Expression quantitative trait loci analysis in plants. Plant Biotechnology Journal. 8:10-27.
Milne I, Shaw P, Stephen G, Bayer M, Cardle L, Thomas WTB, Flavell AJ, Marshall DF.  2010.  Flapjack - graphical genotype visualization. Bioinformatics. 26:3133-3134.
Porter JR, Challinor A, Ewert F, Falloon P, Fischer T, Gregory PJ, Van Ittersum MK, Olesen JE, Moore KJ, Rosenzweig C et al..  2010.  Food security: focus on agriculture. Science. 328:172-173.
Zakri AM, Ziegler A, Torrance L, Fischer R, Commandeur U.  2010.  Generation and characterisation of a scFv against recombinant coat protein of the geminivirus Tomato leaf curl New Delhi virus. Archives of Virology. 155:335-342.
De Maayer P, Chan WY, Venter SN, Toth IK, Birch PRJ, Joubert F, Coutinho TA.  2010.  Genome sequence of Pantoea ananatis LMG20103, the causative agent of Eucalyptus blight and dieback. Journal of Bacteriology. 192:2936-2937.
Richards S, Gibbs RA, Gerardo NM, Moran N, Nakabachi A, Stern D, Tagu D, Wilson ACC, Muzny D, Kovar C et al..  2010.  Genome sequence of the pea aphid Acyrthosiphon pisum. PLOS Biology. 8:-e1000313.
Cockram J, White J, Zuluaga D, Smith D, Comadran J, Macaulay M, Luo ZW, Kearsey MJ, Werner P, Harrap D et al..  2010.  Genome-wide association mapping of morphological traits to candidate gene resolution in the un-sequenced barley genome. Proceedings of the National Academy of Sciences, USA. 107:21611-21616.
Bessell PR, Matthews L, Smith-Palmer A, Rotariu O, Strachan NJC, Forbes KJ, Cowden J, Reid SWJ, Innocent GT.  2010.  Geographic determinants of reported human Campylobacter infections in Scotland. BMC Public Health. 10:-423.
Grant OM, Tronina L, Ramalho JC, Besson CK, Lobo-Do-Vale R, Pereira JS, Jones HG, Chaves MM.  2010.  The impact of drought on leaf physiology of Quercus suber L. trees: comparison of an extreme drought event with chronic rainfall reduction. Journal of Experimental Botany. 61:4361-4371.
Clark EL, Karley AJ, Hubbard SF.  2010.  Insect endosymbionts: manipulators of insect herbivore trophic interactions? Protoplasma. 244:25-51.
Raczynska KD, Simpson CG, Ciesiolka A, Szewc L, Lewandowska D, McNicol JW, Szweykowska-Kulinska Z, Brown JWS, Jarmolowski A.  2010.  Involvement of the nuclear cap-binding protein complex in alternative splicing in Arabidopsis thaliana.. Nucleic Acids Research. 38:265-278.
Mitchell RJ, Hester AJ, Campbell CD, Chapman SJ, Cameron CM, Hewison RL, Potts JM.  2010.  Is vegetation composition or soil chemistry the best predictor of the soil microbe community? Plant and Soil. 333:417-430.
Blum M, Boehler M, Randall E, Young V, Csukai M, Kraus S, Moulin F, Scalliet G, Avrova AO, Whisson SC et al..  2010.  Mandipropamid targets the cellulose synthase-like PiCesA3 to inhibit cell wall biosynthesis in the oomycete plant pathogen, Phytophthora infestans. Molecular Plant Pathology. 11:227-243.
Rhind SM, Kyle CE, Mackie C, McDonald L, Zhang Z, Duff EI, Bellingham M, Amezaga MR, Mandon-Pepin B, Loup B et al..  2010.  Maternal and fetal tissue accumulation of selected endocrine disrupting compounds (EDC) following exposure to sewage sludge-treated pastures before or after conception. Journal of Environmental Monitoring. 12:1582-1593.
Campbell R, Ducreux LJM, Morris WL, Morris JA, Suttle JC, Ramsay G, Bryan GJ, Hedley PE, Taylor MA.  2010.  The metabolic and developmental roles of cartotenoid cleavage dioxygenase 4 from potato. Plant Physiology. 154:656-664.
Sanchez SE, Petrillo E, Beckwith EJ, Zhang X, Rugnone ML, Hernando CE, Cuevas JC, Godoy Herz MA, Depetris-Chauvin A, Simpson CG et al..  2010.  A methyl transferase links the circadian clock to the regulation of alternative splicing. Nature. 468:112-116.
Castillo NRF, Reed BM, Graham J, Fern F, Bassil NV.  2010.  Microsatellite markers for raspberry and blackberry. Journal of the American Society for Horticultural Science. 135:271-278.
Elia M, Swanston JS, Moralejo MA, Casas AM, P AM, Ciudad FJ, Thomas WTB, Smith PL, Ullrich SE, Molina-Cano J-L.  2010.  A model of the genetic differences in malting quality between European and North American barley cultivars based on a QTL study of the cross Triumph x Morex. Plant Breeding. 129:280-290.
Preedy K, Schofield PG, Liu S, Matzavinos A, Chaplain MAJ, Hubbard SF.  2010.  Modelling contact spread of infection in host-parasitoid systems: Vertical transmission of pathogens can cause chaos. Journal of Theoretical Biology. 262:441-451.
Clayton SJ, Clegg CD, Bristow AW, Gregory PJ, Headon DM, Murray PJ.  2010.  Movement of newly assimilated 13C carbon in the grass Lolium perenne and its incorporation into rhizosphere microbial DNA. Rapid Communications in Mass Spectrometry. 24:535-540.
Wright KM, Cowan GH, Lukhovitskaya NI, Tilsner J, Roberts AG, Savenkov EI, Torrance L.  2010.  The N-terminal domain of PMTV TGB1 movement protein is required for nucleolar localization, microtubule association and long-distance movement. Molecular Plant-Microbe Interactions. 23:1486-1497.
Dos Reis J FB, Simon MF, Gross E, Boddey RM, Elliott GN, Neto NE, Loureiro MdeF, de Queiroz LP, Scotti MR, Chen W-M et al..  2010.  Nodulation and nitrogen fixation by Mimosa spp. in the Cerrado and Caatinga biomes of Brazil. New Phytologist. 186:934-946.
Mostowfizadeh-Ghalamfarsa R, Panabi F, Banihashemi Z, Cooke DEL.  2010.  Phylogenetic relationship of Phytophthora cryptogea Pethybr. & Laff and P. drechsleri Tucker. Fungal Biology. 114:325-339.
Chichkova NV, Shaw J, Galiullina RA, Drury GE, Tuzhikov AI, Kim S-H, Kalkum M, Hong TB, Gorshkova EN, Torrance L et al..  2010.  Phytaspase, a relocalisable cell death promoting plant protease with caspase specificity. EMBO Journal. 29:1149-1161.
Rietman H, Champouret N, Hein I, Niks RE, Vleeshouwers VGAA.  2010.  Plant and oomycetes, an intimate relationship: co-evolutionary principles and impact on agricultural practice. CAB Review. 58:1-17.
Hinojosa MB, Carreira JA, Garc R, Rodr JM, Daniell TJ, Griffiths BS.  2010.  Plant treatment, pollutant load and soil type effects in the rhizosphere ecology of trace element polluted soils. Ecotoxicology and Environmental Safety. 73:970-981. Abstract
Kim S-H, Spensley M, Choi SK, Calixto CPG, Pendle AF, Koroleva O, Shaw PJ, Brown JWS.  2010.  Plant U13 orthologues and orphan snoRNAs identified by RNomics of RNA from Arabidopsis nucleoli. Nucleic Acids Research. 38:3054-3067.
Tilsner J, Cowan GH, Roberts AG, Chapman SN, Ziegler A, Savenkov EI, Torrance L.  2010.  Plasmodesmal targeting and intercellular movement of Potato mop-top pomovirus is mediated by a membrane anchored tyrosine-based motif on the lumenal side of the endoplasmic reticulum and the C-terminal transmembrane domain in the TGB3 movement protein. Virology. 402:41-51.
Johnson SN, Petitjean S, Clark KE, Mitchell C.  2010.  Protected raspberry production accelerates onset of oviposition by vine weevils (Otiorhynchus sulcatus). Agricultural and Forest Entomology. 12:277-283.
Rotariu O, Smith-Palmer A, Cowden J, Bessell PR, Innocent GT, Reid SWJ, Matthews L, Dallas J, Ogden ID, Forbes KJ et al..  2010.  Putative household outbreaks of campylobacteriosis typically comprise single MLST genotypes. Epidemiology and Infection. 138:1744-1747.
Robinson G, Wright S, Elwin K, Hadfield SJ, Katzer F, Bartley PM, Hunter PR, Nath M, Innes EA, Chalmers RM.  2010.  Re-description of Cryptosporidium cuniculus Inman and Takeuchi 1979 (Apicomplexa:Cryptosporidiidae): morphology, biology and phylogeny. International Journal for Parasitology. 40:1539-1548.
Oliva R, Win J, Raffaele S, Boutemy L, Bozkurt TO, Chaparro-Garcia A, Segretin ME, Stam R, Schornack S, Cano LM et al..  2010.  Recent developments in effector biology of filamentous plant pathogens. Cellular Microbiology. 12:705-715.
K A, Kuiper HA, Marvin HJP, Boon PE, Busk L, Cnudde FC, Cope S, Davies HV, Dreyer M, Frewer LJ et al..  2010.  The SAFE FOODS framework for improved risk analysis of foods. Food Control. 21:1566-1587.
Cock PJA, Fields CJ, Goto N, Heuer ML, Rice PM.  2010.  The Sanger FASTQ file format for sequences with quality scores, and the Solexa/Illumina FASTQ variants. Nucleic Acids Research. 38:1767-1771.
Broadley MR, Alcock J, Alford J, Cartwright P, Foot I, Fairweather-Tait SJ, Hart DJ, Hurst R, Knott P, McGrath SP et al..  2010.  Selenium biofortification of high-yielding winter wheat (Triticum aestivum L.) by liquid or granular Se fertilisation. Plant and Soil. 332:5-18.
Broadley MR, O'Lochlainn S, Hammond JP, Bowen HC, Cakmak I, Eker S, Erdem H, King GJ, White PJ.  2010.  Shoot zinc (Zn) concentration varies widely within Brassica oleracea L. and is affected by soil Zn and phosphorus (P) levels. Journal of Horticultural Science & Biotechnology. 85:375-380.
Carr JP, Lewsey MG, Palukaitis P.  2010.  Signaling in induced resistance. Advances in Virus Research. 76:57-121.
Rustenholz C, Hedley PE, Morris J, Choulet F, Feuillet C, Waugh R, Paux E.  2010.  Specific patterns of gene space organisation revealed in wheat by using the combination of barley and wheat genomic resources. BMC Genomics. 11:-714.
Zhang X-S, Chase-Topping ME, McKendrick IJ, Savill NJ, Woolhouse MEJ.  2010.  Spread of E. coli O157 infection among Scottish cattle farms: Stochastic models and model selection. Epidemics. 2:11-20.
Hodgson JG, Sharafi M, Jalili A, Diaz S, Montserrat-Marti G, Palmer C, Cerabolini B, Pierce S, Hamzehee B, Asri Y et al..  2010.  Stomatal vs. genome size in angiosperms: The somatic tail wagging the genomic dog? Annals of Botany. 105:573-584.
Newton AC, Duncan JM, Augustin NH, Guy DC, Cooke DEL.  2010.  Survival, distribution and genetic variability of inoculum of the strawberry red core pathogen, Phytophthora fragariae var. fragariae, in soil. Plant Pathology. 59:472-479.
Lewsey MG, Gonz I, Kalinina NO, Palukaitis P, Canto T, Carr JP.  2010.  Symptom induction and RNA silencing suppression by the cucumber mosaic virus 2b protein. Plant Signaling & Behaviour. 5:705-708.
Milne I, Bayer M, Cardle L, Shaw P, Stephen G, Wright F, Marshall DF.  2010.  Tablet - next generation sequence assembly visualization. Bioinformatics. 26:401-402.
Joshi MV, Mann SG, Antelmann H, Widdick DA, Fyans JK, Chandra G, Hutchings MI, Toth IK, Hecker M, Loria R et al..  2010.  The twin arginine protein transport pathway exports multiple virulence proteins in the plant pathogen Streptomyces scabies. Molecular Microbiology. 77:252-271.
Lichner L, Hallett PD, Orfanus T, Czachor H, Rajkai K, Sir M, Tesai M.  2010.  Vegetation impact on the hydrology of an aeolian sandy soil in a continental climate. Ecohydrology. 3:413-420.
Waugh R, Marshall DF, Thomas WTB, Comadran J, Russell JR, Close T, Stein N, Hayes P, Muehlbauer G, Cockram J et al..  2010.  Whole-genome association mapping in elite inbred crop varieties. Genome. 53:967-972.
2011
Bouwman FG, de Roos B, Rubio-Aliaga I, Crosley LK, Duthie SJ, Mayer CD, Horgan GW, Polley AC, Heim C, Coort SLM et al..  2011.  2D-electrophoresis and multiplex immunoassay proteomic analysis of different body fluids and cellular components reveal known and novel markers for extended fasting. BMC Medical Genomics. 4
Mayor DJ, Cook K, Thornton B, Walsham P, Witte UFM, Zuur AF, Anderson TR.  2011.  Absorption efficiencies and basal turnover of C, N and fatty acids in a marine Calanoid copepod. Functional Ecology. 25:509-518.
Sun XL, Gilroy EM, Chini A, Nurmberg PL, Hein I, Lacomme C, Birch PRJ, Hussain A, Yun BW, Loake GJ.  2011.  ADS1 encodes a MATE-transporter that negatively regulates plant disease resistance. New Phytologist. 192:471-482.
Russell JR, Dawson IK, Flavell AJ, Steffenson B, Weltzien E, Booth A, Ceccarelli S, Grando S, Waugh R.  2011.  Analysis of >1000 single nucleotide polymorphisms in geographically matched samples of landrace and wild barley indicates secondary contact and chromosome-level differences in diversity around domestication genes. New Phytologist. 191:564-578.
Yong SYC, Choong CY, Cheong PL, Pang SL, Amalina RN, Harikrishna JA, Mat-Isa MN, Hedley PE, Milne L, Vaillancourt RE et al..  2011.  Analysis of ESTs generated from inner bark tissue of an Acacia auriculiformis x Acacia mangium hybrid. Tree Genetics and Genomes. 7:143-152.
Knapp CW, McCluskey SM, Singh BK, Campbell CD, Hudson G, Graham DW.  2011.  Antibiotic resistance gene abundances correlate with metal and geochemical conditions in archived Scottish soils. PLoS ONE. 6:e27300.
Barrett G, Campbell CD, Fitter AH, Hodge A.  2011.  The arbuscular mycorrhizal fungus Glomus hoi can capture and transfer nitrogen from organic patches to its associated host plant at low temperature. Applied Soil Ecology. 48:102-105.
Rosling A, Cox F, Cruz-Martinez K, Ihrmark K, Grelet GA, Lindahl BD, Menkis A, James TY.  2011.  Archaeorhizomycetes: unearthing an ancient class of ubiquitous soil fungi. Science. 333:876-879.
Mitchell C, Brennan RM, Cross JV, Johnson SN.  2011.  Arthropod pests of currant and gooseberry crops in the UK: their biology, management and future prospects. Agricultural and Forest Entomology. 13:221-237.
Cornulier T, Robinson RA, Elston DA, Lambin X, Sutherland WJ, Benton T.  2011.  Bayesian reconstitution of environmental change from disparate historical records: hedgerow loss and farmland bird declines. Methods in Ecology and Evolution. 2:86-94.
Cooper JM, Burton D, Daniell TJ, Griffiths BS, Zebarth BJ.  2011.  Carbon mineralization kinetics and soil biological characteristics as influenced by manure addition in soil incubated at a range of temperatures. European Journal of Soil Biology. 47:392-399.
Brown I, Poggio L, Gimona A, Castellazzi MS.  2011.  Climate change, drought risk and land capability for agriculture: implications for land-use in Scotland. Regional Environmental Change. 11:503-518.
Chakraborty SK, Newton AC.  2011.  Climate change, plant diseases and food security: an overview. Plant Pathology. 60:2-14.
Kikvidze Z, Michalet R, Brooker RW, Cavieres LA, Lortie CJ, Pugnaire FI, Callaway RM.  2011.  Climatic drivers of plant-plant interactions and diversity in alpine communities. Alpine Botany. 121:63-70.
Chen XW, Hedley PE, Morris J, Liu H, Niks RE, Waugh R.  2011.  Combining genetical genomics and bulked segregant analysis-based differential expression: an approach to gene localization. Theoretical and Applied Genetics. 122:1375-1383.
Bayer MM, Milne I, Stephen G, Shaw P, Cardle L, Wright F, Marshall DF.  2011.  Comparative visualization of genetic and physical maps with Strudel. Bioinformatics. 27:1307-1308.
Cullen DW, Harwood WA, Smedley M, Davies HV, Taylor MA.  2011.  Comparison of DNA walking methods for isolation of transgene flanking regions in GM potato. Molecular Biotechnology. 49:19-31.
Dick J, Andrews C, Beaumont DA, Benham S, Brooks DR, Corbett S, Lloyd D, McMillan S, Monteith DT, Pilgrim ES et al..  2011.  A comparison of ecosystem services delivered by 11 long-term monitoring sites in the UK environmental change network. Environmetrics. 22:639-648.
Vinten AJA, Artz RRE, Thomas N, Potts JM, Avery LM, Langan SJ, Watson H, Cook Y, Taylor C, Abel C et al..  2011.  Comparison of microbial community assays for the assessment of stream biofilm ecology. Journal of Microbiological Methods. 85:190-198.
Glenk K, Colombo S.  2011.  Designing policies to mitigate the agricultural contribution to climate change: an assessment of soil based carbon sequestration and its ancillary effects. Climatic Change. 105:43-66.
Benavides J, Maley SM, Pang YP, Palarea J, Eaton SL, Katzer F, Innes EA, Buxton DA, Chianini F.  2011.  Development of lesions and tissue distribution of parasite in lambs orally infected with sporulated oocysts of Toxoplasma gondii. Veterinary Parasitology. 179:209-215.
Lewis FI, Brulisauer F, Cousens C, McKendrick IJ, Gunn GJ.  2011.  Diagnostic accuracy of PCR for Jaagsiekte sheep retrovirus using field data from 125 Scottish sheep flocks. Veterinary Journal. 187:104-108.
Woinarski JCZ, Legge S, Fitzsimons JA, Traill BJ, Burbidge AA, Fisher A, Firth RSC, Gordon IJ, Griffiths AD, Johnson C et al..  2011.  The disappearing mammal fauna of northern Australia: context, cause, and response. Conservation Letters. 4:192-201.
Sun B, Hallett PD, Caul S, Daniell TJ, Hopkins DW.  2011.  Distribution of soil carbon and microbial biomass in arable soils under different tillage regimes. Plant and Soil. 338:17-25.
Hepburn CD, Pritchard DW, Cornwall CE, McLeod RJ, Beardall J, Raven JA, Hurd CL.  2011.  Diversity of carbon use strategies in a kelp forest community: implications for a high CO2 ocean. Global Change Biology. 17:2488-2497.
Clark KE, Hartley SE, Johnson SN.  2011.  Does mother know best? The preference-performance hypothesis and parent-offspring conflict in aboveground-belowground herbivore life cycles Ecological Entomology. 36:117-124.
Garcia-Palacios P, Bowker MA, Chapman SJ, Maestre FT, Soliveres S, Gallardo A, Valladares F, Guerrero C, Castillo-Monroy AP, Escudero A.  2011.  Early-successional vegetation changes after roadside prairie restoration modify soil functioning by changing microbial functional diversity. Soil Biology and Biochemistry. 43:1245-1253.
Karami N, Clemente R, Moreno-Jimenez E, Lepp NW, Beesley L.  2011.  Efficiency of green waste compost and biochar soil amendments for reducing lead and copper mobility and uptake to ryegrass. Journal of Hazardous Materials. 191:41-48.
Johnson SN, Barton AT, Clark KE, Gregory PJ, McMenemy LS, Hancock RD.  2011.  Elevated atmospheric carbon dioxide impairs the performance of root-feeding vine weevils by modifying root growth and secondary metabolites. Global Change Biology. 17:688-695.
McIntosh BS, Ascough, J. C. II, Twery M, Chew J, Elmahdi A, Haase D, Harou JJ, Hepting D, Cuddy S, Jakeman AJ et al..  2011.  Environmental decision support systems (EDSS) development - challenges and best practices. Environmental Modelling and Software. 26:1389-1402.
Moreno-Jimenez E, Beesley L, Lepp NW, Dickinson NM, Hartley W, Clemente R.  2011.  Field sampling of soil pore water to evaluate trace element mobility and associated environmental risk. Environmental Pollution. 159:3078-3085.
Currey PA, Johnson D, Dawson LA, van der Wal R, Thornton B, Sheppard LJ, Leith ID, Artz RRE.  2011.  Five years of simulated atmospheric nitrogen deposition have only subtle effects on the fate of newly synthesized carbon in Calluna vulgaris and Eriophorum vaginatum. Soil Biology and Biochemistry. 43:495-502.
Malosetti M, van Eeuwijk FA, Boer MP, Casas AM, Elia M, Moralejo M, Bhat PR, Ramsay L, Molina-Cano J.  2011.  Gene and QTL detection in a three-way barley cross under selection by a mixed model with kinship information using SNPs. Theoretical and Applied Genetics. 122:1605-1616.
Martin-Sanz A, Caminero C, Jing R, Flavell AJ, de la Vega MP.  2011.  Genetic diversity among Spanish pea (Pisum sativum L.) landraces, pea cultivars and the world Pisum sp. core collection assessed by retrotransposon-based insertion polymorphisms (RBIPs). Spanish Journal of Agricultural Research. 9:166-178.
Sait M, Clark EM, Wheelhouse N, Spalding L, Livingstone M, Sachse K, Markey BK, Magnino S, Siarkou VI, Vretou E et al..  2011.  Genetic variability of Chlamydophila abortus strains assessed by PCR-RFLP analysis of polymorphic membrane protein-encoding genes. Veterinary Microbiology. 151:284-290.
Xu X, Pan SK, Cheng SF, Zhang B, Mu DS, Ni PX, Zhang GY, Yang S, Li RQ, Wang J et al..  2011.  Genome sequence and analysis of the tuber crop potato. Nature. 475:189-195.
Glasner JD, Yang C, Reverchon S, Hugouvieux-Cotte-Pattat N, Condemine G, Bohin JP, Van GF, Yang S, Franza T, Expert D et al..  2011.  Genome sequence of the plant-pathogenic bacterium Dickeya dadantii 3937. Journal of Bacteriology. 193:2076-2077.
Kikuchi T, Cotton JA, Dalzell JJ, Hasegawa K, Kanzaki N, McVeigh P, Takanashi T, Tsai IJ, Assefa SA, Cock PJA et al..  2011.  Genomic insights into the origin of parasitism in the emerging plant pathogen Bursaphelenchus xylophilus. PLoS Pathogens. 7:e1002219.
Clements MN, Clutton-Brock TH, Albon SD, Pemberton JM, Kruuk LEB.  2011.  Gestation length variation in a wild ungulate. Functional Ecology. 25:691-703.
Beattie JH, Nicol F, Gordon MJ, Reid MD, Cantlay L, Horgan GW, Kwun IS, Ahn JY, Ha TY.  2011.  Ginger phytochemicals mitigate the obesogenic effects of a high-fat diet in mice: a proteomic and biomarker network analysis. Molecular Nutrition and Food Research. 55:S203-S213.
Chen YP, Prashar A, Erichsen JT, To CH, Hocking PM, Guggenheim JA.  2011.  Heritability of ocular component dimensions in chickens: genetic variants controlling susceptibility to experimentally-induced myopia and pre-treatment eye size are distinct. Investigative Opthalmology & Visual Science. 52:4012-4020.
Wachowiak W, Salmela MJ, Ennos RA, Iason GR, Cavers S.  2011.  High genetic diversity at the extreme range edge: nucleotide variation at nuclear loci in Scots pine (Pinus sylvestris L.) in Scotland. Heredity. 106:775-787.
Liu H, McNicol JW, Bayer MM, Morris JA, Cardle L, Marshall DF, Schulte D, Stein N, Shi B, Tandien S et al..  2011.  Highly parallel gene-to-BAC addressing using microarrays. Biotechniques. 50:165-174.
Glenk K, Colombo S.  2011.  How sure can you be? A framework for considering delivery uncertainty in benefit assessments based on stated preference methods Journal of Agricultural Economics. 62:25-46.
Russell JR, Bayer MM, Booth C, Cardle L, Hackett CA, Hedley PE, Jorgensen L, Morris JA, Brennan RM.  2011.  Identification, utilisation and mapping of novel transcriptome-based markers from blackcurrant (Ribes nigrum). BMC Plant Biology. 11:147.
Britton AJ, Helliwell RC, Lilly A, Dawson LA, Fisher JM, Coull MC, Ross J.  2011.  An integrated assessment of ecosystem carbon pools and fluxes across an oceanic alpine toposequence. Plant and Soil. 345:287-302.
Manning AD, Wood J, Cunningham RB, McIntyre S, Shorthouse DJ, Gordon IJ, Lindenmayer DB.  2011.  Integrating research and restoration: a long-term woodland experiment in south-eastern Australia. Australian Zoologist. 35:633-648.
Meier-Augenstein W, Chartrand MMG, Kemp HF, St-Jean G.  2011.  An inter-laboratory comparative study into sample preparation for both reproducible and repeatable forensic H-2 isotope analysis of human hair by continuous flow isotope ratio mass spectrometry. Rapid Communications in Mass Spectrometry. 25:3331-3338.
Ramsay L, Comadran J, Druka A, Marshall DF, Thomas WTB, Macaulay M, MacKenzie K, Simpson CG, Fuller J, Bonar N et al..  2011.  INTERMEDIUM-C, a modifier of lateral spikelet fertility in barley, is an ortholog of the maize domestication gene TEOSINTE BRANCHED 1. Nature Genetics. 43:169-172.
McKeown NK, Bishop JL, Cuadros J, Hillier S, Amador E, Makarewicz HD, Parente M, Silver EA.  2011.  Interpretation of reflectance spectra of clay mineral-silica mixtures: implications for Martian clay mineralogy at Mawrth Vallis. Clays and Clay Minerals. 59:400-415.
Tordoff GM, Chamberlain PM, Crowther TW, Black HIJ, Jones TH, Stott A, Boddy L.  2011.  Invertebrate grazing affects nitrogen partitioning in the saprotrophic fungus Phanerochaete velutina. Soil Biology and Biochemstry. 43:2338-2346.
Gyaneshwar P, Hirsch AM, Moulin L, Chen WM, Elliott GN, Bontemps C, Estrada-de los Santos P, Gross E, dos Reis J, F.B et al..  2011.  Legume-nodulating betaproteobacteria: diversity, host range, and future prospects. Molecular Plant-Microbe Interactions. 24:1276-1288.
Yao H, Gao Y, Nicol GW, Campbell CD, Prosser JI, Zhang L, Han W, Singh BK.  2011.  Links between ammonia oxidizer community structure, abundance and nitrification potential in acidic soils. Applied and Environmental Microbiology. 77:4618-4625.
Macdonald CA, Clark IM, Zhao FJ, Hirsch PR, Singh BK, McGrath SP.  2011.  Long-term impacts of zinc and copper enriched sewage sludge additions on bacterial, archaeal and fungal communities in arable and grassland soils. Soil Biology and Biochemistry. 43:932-941.
Whitfield S, Reed M, Thomson KJ, Christie M, Stringer L, Quin CH, Anderson R, Moxey A, Hubacek K.  2011.  Managing peatland ecosystem services: current UK policy and future challenges in a changing world. Scottish Geographical Journal. 127:209-230.
Abreu IN, Choi YH, Sawaya ACHF, Eberlin MN, Mazzafera P, Verpoorte R.  2011.  Metabolic alterations in different development stages Pilocarpus microphyllus. Planta Medica. 77:293-300.
Beleggia R, Platani C, Papa R, Di Chio A, Barros E, Mashaba C, Wirth J, Fammartino A, Sautter C, Conner S et al..  2011.  Metabolomics and food processing: from semolina to pasta. Journal of Agricultural and Food Chemistry. 59:9366-9377.
Rubio-Aliaga I, de Roos B, Duthie SJ, Crosley LK, Mayer C, Horgan GW, Colquhoun IJ, Le Gall G, Huber F, Kremer W et al..  2011.  Metabolomics of prolonged fasting in humans reveals new catabolic markers. Metabolomics. 7:375-387.
Ronfort C, Souchere V, Martin P, Sebillotte C, Castellazzi MS, Barbottin A, Meynard JM, Laignel B.  2011.  Methodology for land use change scenario assessment for runoff impacts: A case study in a north-western European Loess belt region (Pays de Caux, France). Catena. 86:36-48.
Comadran J, Russell JR, Booth A, Pswarayi A, Ceccarelli S, Grando S, Stanca AM, Pecchioni N, Akar T, Al-Yassin A et al..  2011.  Mixed model association scans of multi-environmental trial data reveal major loci controlling yield and yield related traits in Hordeum vulgare in Mediterranean environments. Theoretical and Applied Genetics. 122:1363-1373.
Caron-Lormier G, Bohan DA, Dye R, Hawes C, Humphry RW, Raybould A.  2011.  Modelling an ecosystem: the example of agro-ecosystems. Ecological Modelling. 222:1163-1173.
Bohan DA, Powers SJ, Champion G, Haughton AJ, Hawes C, Squire GR, Cussans J, Mertens SK.  2011.  Modelling rotations: can crop sequences explain arable weed seedbank abundance? Weed Research. 51:422-432.
Scibetta S, Schena L, Chimento A, Cacciola SO, Cooke DEL.  2011.  A molecular method to assess Phytophthora diversity in environmental samples. Journal of Microbiological Methods. 88:356-368.
Perez-Mendoza D, Coulthurst SJ, Humphris S, Campbell E, Welch M, Toth IK, Salmond GPC.  2011.  A multi-repeat adhesin of the phytopathogen, Pectobacterium atrosepticum, is secreted by a Type 1 pathway and is subject to complex regulation involving a non-canonical diguanylate cyclase. Molecular Microbiology. 82:719-733.
de Carcer DA, Cuiv O, Wang T, Kang S, Worthley D, Whitehall V, Gordon IJ, McSweeney C, Leggett B, Morrison M.  2011.  Numerical ecology validates a biogeographical distribution and gender-based effect on mucosa-associated bacteria along the human colon. ISME Journal. 5:801-809.
Yan X, De Clercq P, Han R, Jones JT, Chen S, Moens M.  2011.  Osmotic responses of different strains of Steinernema carpocapsae. Nematology. 13:845-851.
McGavin WJ, Cock PJA, MacFarlane SA.  2011.  Partial sequence and RT-PCR diagnostic test for the plant rhabdovirus Raspberry vein chlorosis virus. Plant Pathology. 60:462-467.
Comadran J, Ramsay L, MacKenzie K, Hayes P, Close TJ, Muehlbauer G, Stein N, Waugh R.  2011.  Patterns of polymorphism and linkage disequilibrium in cultivated barley. Theoretical and Applied Genetics. 122:523-531.
Smkal P, Kenicer G, Flavell AJ, Corander J, Kosterin O, Redden RJ, Ford R, Coyne CJ, Maxted M, Ambrose MJ et al..  2011.  Phylogeny, phylogeography and genetic diversity of the Pisum genus. Plant Genetic Resources. 9:4-18.
Vartapetian AB, Tuzhikov AI, Chichkova NV, Taliansky ME, Wolpert TJ.  2011.  A plant alternative to animal caspases: subtilisin-like proteases. Cell Death and Differentiation. 18:1289-1297.
Andrews M, Edwards GR, Ridgway HJ, Cameron KC, Di HJ, Raven JA.  2011.  Positive plant microbial interactions in perennial ryegrass dairy pasture systems. Annals of Applied Biology. 159:79-92.

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The James Hutton Research Institute is the result of the merger in April 2011 of MLURI and SCRI. This merger formed a new powerhouse for research into food, land use, and climate change.