Publications list
Filters: First Letter Of Last Name is C [Clear All Filters]
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2012.
Evaluation and improvement of the regulatory inference for large co-expression networks with limited sample size. BMC Systems Biology. 11:ArticleNo.62.
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2017.
Evaluation of effects of transgenic Bt maize on microarthropods in a European multi-site experiment. Pedobiologia. 51:207-218. Abstract
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2007.
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2012.
Evaluation of the efficacy of clinical diagnosis of ovine pulmonary adenocarcinoma. Veterinary Record. 162:88-90. Abstract
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2008.
Evidence and evolutionary analysis of ancient whole-genome duplication in barley predating the divergence from rice. BMC Evolutionary Biology. 9:-209.
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2009.
Evidence for a trade-off between early growth and tooth wear in Svalbard reindeer. Journal of Animal Ecology. 76(6):1139-1148.
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2007.
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2016.
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2018.
Evidence for widespread anoxia in the proglacial zone of an Arctic glacier. Chemical Geology. 243(1-2):1-15.
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2007.
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2006.
Evidence that the recessive bymovirus resistance locus rym4 in barley corresponds to the eukaryotic translation initiation factor 4E gene. Molecular Plant Pathology. 6:449-458. Abstract
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2005.
The evolution of inorganic carbon concentrating mechanisms in photosynthesis. Philosophical Transactions of the Royal Society of London B - Biological Sciences. 363:2641-2650. Abstract
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2008.
Evolution of relative reading frame bias in unidirectional prokaryotic gene overlaps. Molecular Biology and Evolution. 27:753-756.
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2010.
Evolution of the seed dispersal system in barley. Cell. 162:527-539.
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2015.
Evolutionary relationships among barley and Arabidopsis core circadian clock and clock-associated genes. Journal of Molecular Evolution. 80:108-119.
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2015.
Evolutionary trait-based approaches for predicting future global impacts of plant pathogens in the genus Phytophthora. Journal of Applied Ecology. 58:718-730.
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2021.
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2021.
Ex-ante analysis of the regional impacts of the Common Agricultural Policy: a rural-urban recursive dynamic CGE model approach. European Planning Studies. Published online..
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2013.
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2021.
Examining phenotypic traits contributing to the spread in northern European potato crops of EU_41_A2, a new clonal lineage of Phytophthora infestans. a new clonal lineage of Phytophthora infestans.. :414-421.
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2021.
Examining phenotypic traits contributing to the spread in northern European potato crops of EU_41_A2, a new clonal lineage of Phytophthora infestans. a new clonal lineage of Phytophthora infestans.. :414-421.
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2021.
Exome sequences and multi-environment field trials elucidate the genetic basis of adaptation in barley. The Plant Journal. 99:1172-1191.
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2019.
Exome sequencing of geographically diverse barley landraces and wild relatives gives insights into environmental adaptation. Nature Genetics. 49:1024-1030.
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2016.
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2013.
Experimental and bioinformatic evidence that raspberry leaf blotch emaravirus P4 is a movement protein of the 30K superfamily. Journal of General Virology. 94:2117-2128.
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2013.
Experimental evidence that feral cats cause local extirpation of small mammals in Australia's tropical savannas. Journal of Applied Ecology. 51:1486-1493.
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2014.
Experimental evidence that livestock grazing intensity affects cyclic vole population regulation processes. Population Ecology. 56:55-61.
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2014.
Explaining people's perceptions of invasive alien species - A conceptual framework. Journal of Environmental Management. 229:10-26.
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2019.
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2012.
An explicit immunogenetic model of gastrointestinal nematode infection in sheep. Journal of the Royal Society Interface. 11:ArrticleNo.20140416..
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2014.
Exploiting induced variation to dissect quantitative traits in barley. Biochemical Society Transactions. 38:683-688.
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2010.
Exploiting regulatory variation to identify genes underlying quantitative resistance to the wheat stem rust pathogen Puccinia graminis f. sp. tritici in barley. Theoretical and Applied Genetics. 117:261-272. Abstract
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2008.
An exploration of the longer-term impacts of community participation in rural health services design. Social Science and Medicine. 141:64-71.
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2015.
Exploring landscape engagement through a participatory touch table approach. Social Sciences. 6
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2017.
Exploring temporality in socio-ecological resilience through experiences of the 2015-16 El Niño across the Tropics. Global Environmental Change - Human and Policy Dimensions. 55:1-14.
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2019.
Exploring the potential of citizen social science for environmental and sustainability research: experiences of and with community-based researchers. Citizen Science: Theory and Practice. 6:1-12.
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2021.
Exploring thermal imaging variables for the detection of stress responses in grapevine under different irrigation regimes. Journal of Experimental Botany. 58:815-825. Abstract
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2007.
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2007.
Exposure assessment for pesticide intake from multiple food products: a Bayesian latent-variable approach. Risk Analysis. 28:1727-1736. Abstract
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2008.
Exposure to a complex cocktail of environmental endocrine disrupting compounds disturbs the KiSS-1/GPR54 system in ovine hypothalamus and pituitary gland. Environmental Health Perspectives. 117(10):1556-1562.
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2009.
Exposure to chemical cocktails before or after conception - the effect of timing on ovarian function. Molecular and Cellular Endocrinology. 376:156-172.
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2013.
Expression quantitative trait loci analysis in plants. Plant Biotechnology Journal. 8:10-27.
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2010.
The extended phenotype of Scots pine (Pinus sylvestris) structures the understorey assemblage. Ecography. 29(3):451-457.
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2006.
Extraction and identification of antioxidant polyhydroxynaphthoquinone pigments from the sea urchin, Psammechinus miliaris. LWT - Food Science and Technology. 59:455-460.
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2014.
Extracts of the seaweed Bifurcaria bifurcata display antifungal activity against human dermatophyte fungi. Journal of Oceanology and Limnology. 37:848-854.
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2019.
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2012.
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2006.
Exudation of alcohol and aldehyde sugars from roots of defoliated Lolium perenne L. grown under sterile conditions. Journal of Chemical Ecology. 34:1411-1421. Abstract
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2008.
Facilitation in plant communities: the past, the present and the future. Journal of Ecology. 96:18-34.
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2008.
Facilitation in the conceptual melting pot. Journal of Ecology. 97(6):1117-1120.
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2009.
Facilitative plant interactions and climate simultaneously drive alpine plant diversity. Ecology Letters. 17:193-202.
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2014.
Factors affecting the restoration of heathland and acid grassland on Pteridium aquilinum-infested land across the UK: a multi site study. Restoration Ecology. 16(4):553-562.
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2008.
Factors influencing the development of black dot (Colletotrichum coccodes) on potato. Plant Pathology. 65:1484-1491.
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2016.
Factors influencing the release of dissolved organic carbon and dissolved forms of nitrogen from a small upland headwater during autumn runoff events. Hydrological Processes. 21(5):622-633.
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2007.
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2008.
Failure to transmit scrapie infection by transferring preimplantation embryos from naturally infected donor sheep. Theriogenology. 72:809-816.
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2009.
FALDO: a semantic standard for describing the location of nucleotide and protein feature annotation. Journal of Biomedical Semantics. 7
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2016.
Fate of tetracycline and sulfonamide resistance genes in a grassland soil amended with different organic fertilizers. Ecotoxicology and Environmental Safety. 170:39-46.
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2019.
Fates of antibiotic resistance genes in the gut microbiome from different soil fauna under long-term fertilization. Environmental Science and Technology. 55:423-432.
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2021.
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2013.
The fetal ovary exhibits temporal sensitivity to a "real-life" mixture of environmental chemicals. Scientific Reports. 6:22279.
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2016.
Field sampling of soil pore water to evaluate trace element mobility and associated environmental risk. Environmental Pollution. 159:3078-3085.
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2011.
A field trial to evaluate the pollution potential to ground and surface waters from woodchip corrals for overwintering livestock outdoors. Soil Use and Management. 22(1):82-94.
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2006.
Fifty years of Biological Conservation. (Editorial). Biological Conservation. 230:A1-A4.
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2019.
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2009.
First 20 years of DNDC: model evolution. Ecological Modelling. 292:51-62.
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2014.
First report of brown rot and wilt of fennel caused by Phytophthora megasperma in Italy. Plant Disease. 90:-110. Abstract
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2006.
First report of potato cyst nematode Globodera rostochiensis, infecting potato (Solanum tuberosum) in Uganda. Plant Disease. 104:3082-3083.
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2020.
First report of the EU_33_A2 clonal lineage of Phytophthora infestans causing late blight disease of potato in Nigeria. New Disease Reports. 40:ArticleNo.20.
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2019.
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2016.
Five years of simulated atmospheric nitrogen deposition have only subtle effects on the fate of newly synthesized carbon in Calluna vulgaris and Eriophorum vaginatum. Soil Biology and Biochemistry. 43:495-502.
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2011.
Flapjack - graphical genotype visualization. Bioinformatics. 26:3133-3134.
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2010.
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2009.
Foetal and post-natal exposure of sheep to sewage sludge chemicals disrupts sperm production in adulthood in a subset of animals. International Journal of Andrology. 35:317-329.
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2012.
Foetal hypothalamic and pituitary expression of GnRH and galanin systems is disturbed by exposure to sewage sludge chemicals via maternal ingestion. Journal of Neuroendocrinology. 22(6):527-533.
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2010.
Folate in pregnancy and imprinted gene and repeat element methylation in the offspring. American Journal of Clinical Nutrition. 97:94-99.
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2013.
Food and nutrition security under global trade: A relation-driven agent-based global trade model. Royal Society Open Science. 8:ArticleNo.201587.
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2021.
Food security: focus on agriculture. Science. 328:172-173.
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2010.
Food self-provisioning in Europe - an exploration of sociodemographic factors in five regions. Rural Sociology. Published online..
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2017.
Food self-provisioning in Europe - an exploration of sociodemographic factors in five regions. Rural Sociology. 83:431-461.
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2018.
Food self-provisioning in Europe: an exploration of sociodemographic factors in five regions. Rural Sociology. 83:431-461.
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2018.
Foraging mechanics and their outcomes for cattle grazing reproductive tropical swards. Applied Animal Behaviour Science. 113(1-3):15-31.
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2008.
Forecasting the spread of aerially transmitted crop diseases with a binary classifier for inoculum survival. Plant Pathology. Published online..
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2018.
Forecasting the spread of aerially transmitted crop diseases with a binary classifier for inoculum survival. Plant Pathology. 67:920-928.
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2018.
Forging future organizational leaders for sustainability science. Nature Sustainability. 2:647-649.
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2019.
Forty years of change in Scottish grassland vegetation: increased richness, decreased diversity and increased dominance. Biological Conservation. 212:327-336.
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2017.
Forty years of reform and opening up: China's progress toward a sustainable path. Science Advances. 5:ArticleNo.eaau9413.
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2019.
FR-H3: a new QTL to assist in the development of fall-sown barley with superior low temperature tolerance. Theoretical and Applied Genetics. 126:335-347.
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2013.
FragMatch - a programme for the analysis of DNA fragment data. Mycorrhiza. 17(2):133-136.
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2007.
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2014.
Framework for quantification of the dynamics of root colonization by Pseudomonas fluorescens isolate SBW25. Frontiers in Microbiology. 11:ArticleNO.585443..
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2020.
From bits to bites: advancement of the Germinate platform to support prebreeding informatics for crop wild relatives. Crop Science. Published online.
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2021.
From oil wealth to green growth: An empirical agent-based model of recession, migration and sustainable urban transition. Environmental Modelling and Software. 107:119-140.
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2018.
From oil wealth to green growth: An empirical agent-based model of recession, migration and sustainable urban transition. Environmental Modelling and Software. 107:119-140.
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2018.
From plants to nematodes: Serratia grimesii BXF1 genome reveals an adaptation to the modulation of multi-species interactions. Microbial Genomics. 4:ArticleNo.000178.
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2018.
FTIR spectroscopy can be used as a screening tool for organic matter quality in regenerating cutover peatlands. Soil Biology & Biochemistry. 40:515-527. Abstract
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2008.
FTIR spectroscopy can be used as a screening tool for organic matter quality in regenerating cutover peatlands. Soil Biology and Biochemistry. 40(2):515-527.
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2008.
Fugacity modelling to predict the distribution of organic contaminants in the soil: oil matrix of constructed biopiles. Chemosphere. 71(8):1432-1439.
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2008.
A fully recombinant ELISA using in vivo biotinylated antibody fragments for the detection of Potato leaf roll virus. Journal of Virological Methods. 159:200-205.
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2009.
Functional analysis of pathogenicity proteins of the potato cyst nematode Globodera rostochiensis using RNAi. Molecular Plant-Microbe Interactions. 18:621-625. Abstract
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2005.
Functional effects of a common single-nucleotide polymorphism (GPX4c718t) in the glutathione peroxidase 4 gene: Interaction with sex. American Journal of Clinical Nutrition. 87:1019-1027. Abstract
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2008.
Functional microbial diversity in European remediating cutover peatlands is directed by labile carbon. Journal of Applied Ecology. 45(6):1799-1809.
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2008.
A functional overview of conservation biological control. Crop Protection. 97:145-158.
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2017.
The functional trait spectrum of European temperate grasslands. Journal of Vegetation Science. 777
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2019.
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2014.
Funding nature conservation: who pays? Animal Conservation. 15:215-216.
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2012.
Fungal bioweathering of mimetite and a general geomycological model for lead apatite mineral biotransformations. Applied and Environmental Microbiology. 81:4955-4964.
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2015.
Fungal transformations of uranium oxides. Environmental Microbiology. 9(7):1696-1710.
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2007.
The future of blue carbon science. Nature Communications. 10:ArticleNo.3998.
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2019.
The future of the northeast Atlantic benthic flora in a high CO2 world. Ecology and Evolution. 4:2787-2798.
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2014.
The future of the uplands. Land Use Policy.. Suppl.1:S204-S216.
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2010.
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2013.
Gas chromatographic metabolic profiling: A sensitive tool for functional microbial ecology. Journal of Microbiological Methods. 75:491-500. Abstract
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2008.
Gene and QTL detection in a three-way barley cross under selection by a mixed model with kinship information using SNPs. Theoretical and Applied Genetics. 122:1605-1616.
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2011.
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2018.
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2016.
Gene expression profiling during asexual development of the late blight pathogen Phytophthora infestans reveals a highly dynamic transcriptome. Molecular Plant-Microbe Interaction. 21:433-447. Abstract
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2008.
A general model of error-prone PCR. Journal of Theoretical Biology. 234:497-509. Abstract
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2005.
A general random walk model for the leptokurtic distribution of organism movement: theory and application. Ecological Modelling. 200:79-88. Abstract
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2007.
Generation and characterisation of a scFv against recombinant coat protein of the geminivirus Tomato leaf curl New Delhi virus. Archives of Virology. 155:335-342.
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2010.
Generation and screening of a BAC library from a diploid potato clone to unravel durable late blight resistance on linkage group IV. International Journal of Plant Genomics. :-51421. Abstract
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2007.
Genetic characterization of a reciprocal translocation present in a widely grown barley variety. Molecular Breeding. 30:1109-1119.
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2012.
Genetic characterization of the HrpL regulon of the fire blight pathogen Erwinia amylovora reveals novel virulence factors. Molecular Plant Pathology. 13:160-173.
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2012.
Genetic diversity among Spanish pea (Pisum sativum L.) landraces, pea cultivars and the world Pisum sp. core collection assessed by retrotransposon-based insertion polymorphisms (RBIPs). Spanish Journal of Agricultural Research. 9:166-178.
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2011.
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2013.
Genetic diversity and population structure of pea (Pisum sativum L.) varieties derived from combined retrotransposon, microsatellite and morphological marker analysis. Theoretical and Applied Genetics. 117:413-424.
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2008.
Genetic diversity in caribou linked to past and future climate change. Nature Climate Change. 4:132-137.
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2013.
Genetic diversity in European Pisum germplasm collections. Theoretical and Applied Genetics. 125:367-380.
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2012.
Genetic diversity of European populations of the oak fine-root pathogen Phytophthora quercina. Forest Pathology. 35:57-70. Abstract
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2005.
Genetic diversity of SIRE-1 retroelements in annual and perennial glycine species revealed using SSAP. Cellular and Molecular Biology Letters. 12:103-110. Abstract
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2007.
Genetic diversity of the subterranean Gansu zokor in a semi-natural landscape. Journal of Zoology. 275(2):153-159.
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2008.
The genetic ghost of an invasion past: colonization and extinction revealed by historical hybridisation in Senecio. Molecular Ecology. 21:369-387.
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2012.
Genetic linkage mapping of economically important traits in cultivated tetraploid potato (Solanum tuberosum L.). G3-Genes Genomes Genetics. 5:2357-2364.
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2015.
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2007.
Genetic resource of European small berries according to Genberry. Sodinninkyste ir Darzininkyste. 27:371-377.
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2008.
Genetic variability of Chlamydophila abortus strains assessed by PCR-RFLP analysis of polymorphic membrane protein-encoding genes. Veterinary Microbiology. 151:284-290.
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2011.
Genetic variation and molecular evolution of endangered Kozlov's pika (Ochotona Koslowi Buchner) based on mitochondrial cytochrome B gene. Polish Journal of Ecology. 58(3):563-568.
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2010.
Genetical and comparative genomics of Brassica under altered Ca supply identifies Arabidopsis Ca-transporter orthologs. The Plant Cell. 26:2818-2830.
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2014.
Genome analyses of an aggressive and invasive lineage of the Irish potato famine pathogen. PLoS Pathogens. 8:e1002940.
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2012.
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2016.
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2014.
Genome editing of potato using CRISPR technologies: current development and future prospective. Plant Cell, Tissue and Organ Culture. 139:403-416.
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2019.
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2016.
Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans. Nature. 461:393-398.
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2009.
Genome sequence and analysis of the tuber crop potato. Nature. 475:189-195.
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2011.
Genome sequence of Pantoea ananatis LMG20103, the causative agent of Eucalyptus blight and dieback. Journal of Bacteriology. 192:2936-2937.
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2010.
Genome sequence of the metazoan plant-parasitic nematode Meloidogyne incognita. Nature Biotechnology. 26:909-915.
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2008.
Genome sequence of the pea aphid Acyrthosiphon pisum. PLOS Biology. 8:-e1000313.
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2010.
Genome sequence of the plant-pathogenic bacterium Dickeya dadantii 3937. Journal of Bacteriology. 193:2076-2077.
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2011.
Genome sequencing and mapping reveal loss of heterozygosity as a mechanism for rapid adaptation in the vegetable pathogen phytophthora capsici. Molecular Plant-Microbe Interactions. 25:1350-1360.
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2012.
Genome wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics. 274:515-527springerlink.com/content/7625g78880706u6m/fulltext.pdf. Abstract
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2005.
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2014.
Genome-wide analysis of the response of Dickeya dadantii 3937 to plant antimicrobial peptides. Molecular Plant-Microbe Interactions. 25:523-533.
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2012.
Genome-wide association analysis of grain yield-associated traits in a Pan-European barley cultivar collection. Plant Genome. 11:ArticleNo.UNSP170073.
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2018.
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2019.
Genome-wide association mapping of agronomic and morphologic traits in highly structured populations of barley cultivars. Theoretical and Applied Genetics. 124:233-246.
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2012.
Genome-wide association mapping of frost tolerance in barley (Hordeum vulgare L.). BMC Genomics. 14:424.
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2013.
Genome-wide association mapping of morphological traits to candidate gene resolution in the un-sequenced barley genome. Proceedings of the National Academy of Sciences, USA. 107:21611-21616.
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2010.
Genome-wide identification of genes regulated by the Rcs phosphorelay system in Erwinia amylovora. Molecular Plant-Microbe Interactions. 25:6-17.
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2012.
Genome-wide QTL and bulked transcriptomic analysis reveals new candidate genes for the control of tuber carotenoid content in potato (Solanum tuberosum L.). Theoretical and Applied Genetics. 127:1917-1933.
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2014.
Genomic and phenotypic characterization of myxoma virus from Great Britain reveals multiple evolutionary pathways distinct from those in Australia. PLoS Pathogens. 13:ArticleNo.e1006252.
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2017.
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2014.
Genomic insights into the origin of parasitism in the emerging plant pathogen Bursaphelenchus xylophilus. PLoS Pathogens. 7:e1002219.
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2011.
Genomic selection in multi-environment crop trials. G3- Genes Genomes Genetics. 6:1313-1326.
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2016.
Genomics analysis in the potato cyst nematode Globodera pallida. Phytopathology. 96:S149-S149.
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2006.
Genomics: the early days of late blight. eLife. 2:e00954.
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2013.
Genotyic variation in maize (Zeamays)-microbe-management interactions for enhancing soil functioning in maize-based cropping systems. New Phytologist. Published online..
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2021.
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2020.
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2021.
Geographic determinants of reported human Campylobacter infections in Scotland. BMC Public Health. 10:-423.
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2010.
Geographical gradient of the eIF4E alleles conferring resistance to potyviruses in pea (Pisum) germplasm. PLoS ONE. 9:e90394-e90394.
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2014.
The geographical patterns of symbiont diversity in the invasive legume Mimosa pudica can be explained by the competitiveness of its symbionts and by the host genotype. Environmental Microbiology. 16:2099-2111.
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2014.
Gestation length variation in a wild ungulate. Functional Ecology. 25:691-703.
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2011.
Getting the timing right: antler growth phenology and sexual selection in a wild red deer population. Oecologia. 164:357-368.
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2010.
Ginger phytochemicals mitigate the obesogenic effects of a high-fat diet in mice: a proteomic and biomarker network analysis. Molecular Nutrition and Food Research. 55:S203-S213.
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2011.
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2014.
Global change effects on plant communities are magnified by time and the number of global change factors imposed. Proceedings of the National Academy of Sciences of the United States of America (PNAS). :ArticleNo.201819027.
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2019.
Global change effects on plant communities are magnified by time and the number of global change factors imposed. Proceedings of the National Academy of Sciences of the United States of America (PNAS). 116:17867-17873.
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2019.
Global change, parasite transmission and disease control: lessons from ecology. Philosophical Transactions of the Royal Society B, Biological Sciences. 372:ArticleNo.20160088.
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2017.
A global collection of permanent vegetation plots. Journal of Vegetation Science. Journal of Vegetation Science. 33
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2022.
A global database for metacommunity ecology, integrating species, traits, environment and space. Scientific Data. 7:1-15.
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2020.
Global patterns of potential future plant diversity hidden in soil seed banks. Nature Communications. 12:ArticleNo.023(2021).
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2021.
Global Research Alliance Modelling Platform (GRAMP): An open web platform for modelling greenhouse gas emissions from agro-ecosystems. Computers and Electronics in Agriculture. 111:112-120.
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2015.
Global wheat production with 1.5 and 2.0 degrees C above pre-industrial warming. Global Change Biology. 25:1428-1444.
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2019.
GrassPlot - a database of multi-scale plant diversity in Palaearctic grasslands. Phytocoenologia. 48:331-347.
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2018.
GrassPlot - a database of multi-scale plant diversity in Palaearctic grasslands. Phytocoenologia. 48:331-347.
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2018.
Green space and stress: evidence from cortisol measures in deprived urban communities. International Journal of Environmental Research and Public Health.
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2013.
Greenspace matters: exploring links between greenspace, gender and well-being with conservation volunteers. Landscape Research. 41:641-651.
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2016.
Group size affects foraging and vigilance in migratory Tibetan antelope. Behavioural Processes. 76(3):192-197.
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2007.
Guidelines on the use of structure-from-motion photogrammetry in geomorphic research. Earth Surface Processes and Landforms. 44:2081-2084.
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2019.
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2015.
Harvesting the potential of induced biological diversity. Trends in Plant Science. 11:71-79. Abstract
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2006.
A hAT superfamily tranposase recruited by the cereal grass genome. Molecular Genetics and Genomics. 275:553-563. Abstract
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2006.
Heading date QTL in a spring x winter barley cross evaluated in Mediterranean environments. Molecular Breeding. 21:455-471. Abstract
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2008.
"Health in" and "Health of" social-ecological systems: a practical framework for the management of healthy and resilient agricultural and natural ecosystems. Frontiers in Public Health. 8:ArticleNo.616328.
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2021.
Heather moorland vegetation and air pollution: a comparison and synthesis of three national gradient studies. Payne, R.J.; Caporn, S.J.M.; Field, C.D.; Carroll, J.A.; Edmondson, J.L.; Britton, A.J.; Dise, N.B. Water, Air and Soil Pollution.. 225:ArticleNo.1198.
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2014.
Heavy metals in sediment from the urban and rural rivers in Harbin City, Northeast China. International Journal of Environmental Research and Public Health. 16:ArticleNo.4313.
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2019.
The heft: a multifunctional management tool. The International Journal of Biodiversity Science and Management. 2:238-241.
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2006.
Heritability of ocular component dimensions in chickens: genetic variants controlling susceptibility to experimentally-induced myopia and pre-treatment eye size are distinct. Investigative Opthalmology & Visual Science. 52:4012-4020.
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2011.