Publications list

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2013

Wright KM, Chapman SN, McGeachy K, Humphris S, Campbell E, Toth IK, Holden NJ. 2013. The endophytic lifestyle of Escherichia coli O157:H7: quantification and internal localization in roots. Phytopathology. 103:333-340.

Burthe S, Newell MA, Goodman G, Butler A, Bregnballe T, Harris E, Wanless S, Cunningham EJA, Daunt F. 2013. Endoscopy as a novel method for assessing endoparasite burdens in free-ranging European shags (Phalacrocorax aristotelis). Methods in Ecology and Evolution. 4:207-216.

Chung B, Yoon JY, Palukaitis P. 2013. Engineered resistance in potato against potato leafroll virus, potato virus A and potato virus Y. Virus Genes. 47:86-92.

Cameron DR, Van Oijen M, Werner C, Butterbach-Bahl K, Grote R, Haas E, Heuvelink GBM, Kiese R, Kros J, Kuhnert M et al.. 2013. Environmental change impacts on the C- and N-cycle of European forests: a model comparison study. Biogeosciences. 10:1751-1773.

Cornulier T, Yoccoz NG, Bretagnolle V, Brommer JE, Butet A, Ecke F, Elston DA, Framstad E, Henttonen H, Hornfeldt B et al.. 2013. Europe-wide dampening of population cycles in keystone herbivores. Science. 340:63-66.

Chen B, Arain MA, Khomik M, Trofymow JA, Grant RF, Kurz WA, Yeluripati J, Wang Z. 2013. Evaluating the impacts of climate variability and disturbance regimes on the historic carbon budget of a forest landscape. Agricultural and Forest Meteorology. 180:265-280.

Espinosa M, Psaltopoulos D, Santini F, Phimister E, Roberts D, Mary S, Ratinger T, Skuras D, Balamou E, Cardenette M et al.. 2013. Ex-ante analysis of the regional impacts of the Common Agricultural Policy: a rural-urban recursive dynamic CGE model approach. European Planning Studies. Published online..

Bertier L, Brouwer H, de Cock AWAM, Cooke DEL, Olsson CHB, Hofte M. 2013. The expansion of Phytophthora clade 8b: three new species associated with winter grown vegetable crops. Persoonia. 31:63-76.

Yu CL, Karlin DG, Lu YW, Wright K, Chen JP, MacFarlane S. 2013. Experimental and bioinformatic evidence that raspberry leaf blotch emaravirus P4 is a movement protein of the 30K superfamily. Journal of General Virology. 94:2117-2128.

Bellingham M, Amezaga MR, Mandon-Pepin B, Speers CJB, Kyle CE, Evans NP, Sharpe RM, Cotinot C, Rhind SM, Fowler PA. 2013. Exposure to chemical cocktails before or after conception - the effect of timing on ovarian function. Molecular and Cellular Endocrinology. 376:156-172.

Mitchell CA, Kalies S, Cizmar T, Heisterkamp A, Torrance L, Roberts AG, Gunn-Moore FJ, Dholakia K. 2013. Femtosecond optoinjection of intact tobacco BY-2 cells using a reconfigurable photoporation platform. PLoS ONE. 8:e79235.

Haggarty P, Hoad G, Campbell DM, Horgan GW, Piyathilake C, McNeill G. 2013. Folate in pregnancy and imprinted gene and repeat element methylation in the offspring. American Journal of Clinical Nutrition. 97:94-99.

Fisk SP, Cuestas-Marcos A, Cistue L, Russell J, Smith KP, Baenziger S, Bedo Z, Corey A, Filichkin T, Karsai I et al.. 2013. FR-H3: a new QTL to assist in the development of fall-sown barley with superior low temperature tolerance. Theoretical and Applied Genetics. 126:335-347.

Cock PJA, Gruning BA, Paszkiewicz K, Pritchard L. 2013. Galaxy tools and workflows for sequence analysis with applications in molecular plant pathology. Peer J. 1:e167.

Cook N, Hubbard SF, Karley AJ, Russell JR. 2013. Genetic diversity and complementary sex determination (CSD) in Dolerus aeneus (Hymenoptera, Symphyta): implications for the conservation of an ecologically-important sawfly. Conservation Genetics. 14:1125-1133.

Yannic G, Pellissier L, Ortego J, Lecomte N, Couturier S, Cuyler C, Dussault C, Hundertmark KJ, Irvine RJ, Jenkins DA et al.. 2013. Genetic diversity in caribou linked to past and future climate change. Nature Climate Change. 4:132-137.

Visioni A, Tondelli A, Francia E, Pswarayi A, Malosetti M, Russell J, Thomas W, Waugh R, Pecchioni N, Romagosa I et al.. 2013. Genome-wide association mapping of frost tolerance in barley (Hordeum vulgare L.). BMC Genomics. 14:424.

Birch PRJ, Cooke DEL. 2013. Genomics: the early days of late blight. eLife. 2:e00954.

Roe J, Ward Thompson C, Aspinall P, Brewer MJ, Duff EI, Miller DR, Mitchell R, Clow A. 2013. Green space and stress: evidence from cortisol measures in deprived urban communities. International Journal of Environmental Research and Public Health.

Shaughnessy LJ, Smith LA, Evans J, Anderson D, Caldow G, Marion G, Low JC, Hutchings MR. 2013. High prevalence of paratuberculosis in rabbits is associated with difficulties in controlling the disease in cattle. Veterinary Journal. 198:267-270.

Hu D, Clift PD, Boning P, Hannigan R, Hillier S, Blusztajn J, Wan S, Fuller DQ. 2013. Holocene evolution in weathering and erosion patterns in the Pearl River delta. Geochemistry Geophysics Geosystems. 14:2349-2368.

Oakey H, Shafiei R, Comadran J, Uzrek N, Cullis B, Gomez LD, Whitehead C, McQueen-Mason SJ, Waugh R, Halpin C. 2013. Identification of crop cultivars with consistently high lignocellulosic sugar release requires the use of appropriate statistical design and modelling. Biotechnology for Biofuels. 6:185.

Monson R, Burr T, Carlton T, Liu H, Hedley P, Toth IK, Salmond GPC. 2013. Identification of genes in the VirR regulon of Pectobacterium atrosepticum and characterization of their roles in quorum sensing-dependent virulence. Environmental Microbiology. 15:687-701.

Laird J, McInally C, Carr C, Doddiah S, Yates G, Chrysanthou E, Khattab A, Love AJ, Geri C, Sadanandom A et al.. 2013. Identification of the domains of Cauliflower mosaic virus protein P6 responsible for the suppression of RNA-silencing and salicylic acid-signaling. Journal of General Virology. 94:2777-2789.

Lobley GE, Holtrop G, Bremner DM, Calder AG, Milne E, Johnstone AM. 2013. Impact of short term consumption of diets high in either non-starch polysaccharides or resistant starch in comparison with moderate weight loss on indices of insulin sensitivity in subjects with metabolic syndrome. Nutrients. 5:2144-2172.

Carsan S, Stroebel A, Dawson I, Kindt R, Swanepoel F, Jamnadass R. 2013. Implications of shifts in coffee production on tree species richness, composition and structure on small farms around Mount Kenya. Biodiversity and Conservation. 22:2919-2936.

Wang Z, Grant RF, Arain MA, Bernier PY, Chen B, Chen JM, Govind A, Guindon L, Kurz WA, Peng C et al.. 2013. Incorporating weather sensitivity in inventory-based estimates of boreal forest productivity: a meta-analysis of process model results. Ecological Modelling. 260:25-35.

Cattadori IM, Wagner BR, Wodzinski LA, Pathak AK, Poole A, Boag B. 2013. Infections do not predict shedding in co-infections with two helminths from a natural system. Ecology. 95:1684-1692.

Crossman J, Whitehead P, Futter MN, Jin L, Shahgedanova M, Castellazzi M, Wade AJ. 2013. The interactive responses of water quality and hydrology to changes in multiple stressors, and implications for the long-term effective management of phosphorus. Science of the Total Environment. 454:230-244.

Cook BR, Atkinson M, Chalmers H, Comins L, Cooksley S, Deans N, Fazey I, Fenemor A, Kesby M, Litke S et al.. 2013. Interrogating participatory catchment organisations: cases from Canada, New Zealand, Scotland and the Scottish-English Borderlands. Geographical Journal. 179:234-247.

Gehlot HS, Tak N, Kaushik M, Mitra S, Chen WM, Poweleit N, Panwar D, Poonar N, Parihar R, Tak A et al.. 2013. An invasive Mimosa in India does not adopt the symbionts of its native relatives. Annals of Botany. 112:179-186.

Moro M, Fischer A, Czajkowski M, Brennan D, Lowassa A, Naiman LC, Hanley N. 2013. An investigation using the choice experiment method into options for reducing illegal bushmeat hunting in western Serengeti. Conservation Letters. 6:37-45.

Fazey I, Evely AC, Reed MR, Stringer LC, Kruijsen JHJ, White PCL, Newsham A, Jin L, Cortazzi M, Phillipson J et al.. 2013. Knowledge Exchange: a review and research agenda for environmental management. Environmental Conservation. 40:19-36.

Reed MS, Fazey I, Stringer LC, Raymond CM, Akhtar-Schuster M, Begni G, Bigas H, Brehm S, Briggs J, Bryce R et al.. 2013. Knowledge management for land degradation monitoring and assessment: an analysis of contemporary thinking. Land Degradation and Development. 24:307-322.

Koichi K, Mayer R, Kaur K, Cottrell A, Gordon IJ. 2013. The management implications of Aboriginal perceptions of feral pigs (Sus scrofa) in Northern Queensland. A case of feral pig management in the Wet Tropics World Heritage Area, Australia. Journal of Australian Indigenous Issues. 16:53-72.

Hill R, Halamish E, Gordon IJ, Clark M. 2013. The maturation of biodiversity as a global social-ecological issue and implications for future biodiversity science and policy. Futures. 46:41-49.

Cubitt MF, Hedley PE, Williamson NR, Morris JA, Campbell E, Toth IK, Salmond GPC. 2013. A metabolic regulator modulates virulence and quorum sensing signal production in Pectobacterium atrosepticum. Molecular Plant Microbe Interactions. 26:356-366.

van der Heijden GA, Legout A, Midwood AJ, Craig CA, Pollier B, Ranger J, Dambrine E. 2013. Mg and Ca root uptake and vertical transfer in soils assessed by an in situ ecosystem scale multi-isotopic (26Mg & 44Ca) tracing experiment in a beech stand (Breuil-Chenue, France). Plant and Soil. 369:33-45.

Roberts WM, Matthews RA, Blackwell MSA, Peukert S, Collins AL, Stutter MI, Haygarth PM. 2013. Microbial biomass phosphorus contributions to phosphorus solubility in riparian vegetated buffer strip soils. Biology and Fertility of Soils. 49:1237-1241.

Andersen R, Chapman SJ, Artz RRE. 2013. Microbial communities in natural and disturbed peatlands: a review. Soil Biology and Biochemistry. 57:979-994.

Nechwatal J, Bakonyi J, Cacciola SO, Cooke DEL, Jung T, Nagy ZA, Vannini A, Vettraino AM, Brasier CM. 2013. The morphology, behaviour and molecular phylogeny of Phytophthora taxon Salixsoil and its redesignation as Phytophthora lacustris sp nov. Plant Pathology. 62:355-369.

Yao HY, Campbell CD, Chapman SJ, Freitag TE, Nicol GW, Singh BK. 2013. Multi-factorial drivers of ammonia oxidizer communities: evidence from a national soil survey. Environmental Microbiology. 15:2545-2556.

Robinson DA, Hockley N, Cooper DM, Emmett BA, Keith AM, Lebron I, Reynolds B, Tipping E, Tye AM, Watts CW et al.. 2013. Natural capital and ecosystem services, developing an appropriate soils framework as a basis for valuation. Soil Biology and Biochemistry. 57:1023-1033.

Chhetri N, Subedi M, Ghimire S. 2013. Niche-based responses in addressing the climatic constraints to farm production: analogues to adapting climate change in Nepal. Climate and Development. 5:174-181.

Southon GE, Field C, Caporn SJM, Britton AJ, Power SA. 2013. Nitrogen deposition reduces plant diversity and alters ecosystem functioning: field-scale evidence from a nationwide survey of UK heathlands. PLoS ONE. 8:e59031.

Rees RM, Baddeley JA, Bhogal A, Ball BC, Chadwick DR, MacLeod M, Lilly A, Pappa VA, Thorman RE, Watson CA et al.. 2013. Nitrous oxide mitigation in UK agriculture. Soil Science and Plant Nutrition.. 59:3-15.

Sukganah A, Choong CY, Russell J, Neale D, Wickneswari R. 2013. Nucleotide sequence analysis of two lignin genes in Acacia auriculiformis x Acacia mangium hybrid for enhancement of wood pulp quality. Tree Genetics and Genome. 9:1369-1381.

Cocito S, Ferrier-Pages C, Cupido R, Rottier C, Meier-Augenstein W, Kemp HF, Reynaud S, Peirano A. 2013. Nutrient acquisition in four Mediterranean gorgonian species. Marine Ecology Progress Series. 473:179-188.

Boag B, Hernandez A, Cattadori IM. 2013. Observations on the epidemiology and interactions between myxomatosis, coccidiosis and helminth parasites in a wild rabbit population in Scotland. European Journal of Wildlife Research. 59:557-562.

Were HK, Kabira JN, Kinyua ZM, Olubayo FM, Karinga JK, Aura J, Lees AK, Cowan GH, Torrance L. 2013. Occurrence and distribution of potato pests and diseases in the major potato growing areas in Kenya. Potato Research. 56:325-342.

Carvalho A, Ribeiro H, Mayes R, Guedes A, Abreu I, Noronha F, Dawson LA. 2013. Organic matter characterization of sediments in two river beaches from Northern Portugal for forensic application. Forensic Science International. 233:403-415.

Alday JG, Cox ES, Pakeman RJ, Harris MP, Le Duc MG, Marrs RH. 2013. Overcoming resistance and resilience of an invaded community is necessary for effective restoration: a multi-site bracken control study. Journal of Applied Ecology. 50:156-167.

Arnold MFF, Haag AF, Capewell S, Boshoff HI, James EK, McDonald R, Mair I, Mitchell AM, Kerscher B, Mitchell TJ et al.. 2013. Partial complementation of Sinorhizobium meliloti bacA mutant phenotypes by the Mycobacterium tuberculosis BacA protein. Journal of Bacteriology. 195:389-398.

Chianini F, Siso S, Ricci E, Eaton SL, Finlayson J, Pang Y, Hamilton S, Steele P, Reid HW, Cantile C et al.. 2013. Pathogenesis of scrapie in ARQ/ARQ sheep after subcutaneous infection: Effect of lymphadenectomy and immune cell subset changes in relation to prion protein accumulation. Veterinary Immunology and Immunopathology. 152:348-358.

Hombach-Klonisch S, Danescu A, Begum F, Amezaga MR, Rhind SM, Sharpe RM, Evans NP, Bellingham M, Cotinot C, Mandon-Pepin B et al.. 2013. Peri-conceptional changes in maternal exposure to sewage sludge chemicals disturbs fetal thyroid gland development in sheep. Molecular and Cellular Endocrinology. 367:98-108.

Canton GJ, Katzer F, Benavides-Silvan J, Maley SW, Palarea-Albaladejo J, Pang Y, Smith S, Bartley PM, Rocchi M, Innes EA et al.. 2013. Phenotypic characterisation of the cellular immune infiltrate in placentas of cattle following experimental inoculation with Neospora caninum in late gestation. Veterinary Research. 44

Dahlawi H, Jordan-Mahy N, Clench M, McDougall GJ, Le Maitre CL. 2013. Polyphenols are responsible for the pro-apoptotic properties of pemegranate juice on leukemia cell lines. Food Science & Nutrition. 1:196-208.

Czachor H, Hallett PD, Lichner L, Jozefaciuk G. 2013. Pore shape and organic compounds drive major changes in the hydrological characteristics of agricultural soils. European Journal of Soil Science. 64:334-344.

Aitkenhead MJ, Coull MC, Towers W, Hudson G. 2013. Prediction of soil characteristics and colour using data from the National Soils Inventory of Scotland. Geoderma. 200-201:99-107.

Chavarria-Krauser A, Dupuy L, Ptashnyk M. 2013. Preface. Mathematical Modelling of Natural Phenoma. 8:1-4.

Mansour E, Casas AM, Gracia MP, Molina-Cano JL, Moralejo M, Cattivelli L, Thomas WTB, Igartua E. 2013. Quantitative trait loci for agronomic traits in an elite barley population for Mediterranean conditions. Molecular Breeding. 33:249-265.

McGeoch SC, Johnstone AM, Lobley GE, Adamson J, Hickson K, Holtrop G, Fyfe C, Clark LF, Pearson DWM, Abraham P et al.. 2013. A randomized crossover study to assess the effect of an oat-rich diet on glycaemic control, plasma lipids and postprandial glycaemia, inflammation and oxidative stress in Type 2 diabetes. Diabetic Medicine. 30:1314-1323.

Kildea S, Quinn L, Mehenni-Ciz J, Cooke DEL, Perez FM, Deahl KL, Griffin D, Cooke LR. 2013. Re-emergence of the Ib mitochondrial haplotype within the British and Irish Phytophthora infestans populations. European Journal of Plant Pathology. 135:237-242.

Critchley CNR, Mitchell RJ, Rose RJ, Griffiths JB, Jackson E, Scott H, Davies OD. 2013. Re-establishment of Calluna vulgaris (L.) Hull in an eight-year grazing experiment on upland acid grassland. Journal of Nature Conservation. 21:22-30.

Hunter LJR, Westwood JH, Heath G, Macaulay K, Smith AG, MacFarlane SA, Palukaitis P, Carr JP. 2013. Regulation of RNA-dependent RNA polymerase 1 and isochorismate synthase gene expression in arabidopsis. PLoS ONE. 8:e66530.

Coutinho BG, Mitter B, Talbi C, Sessitsch A, Bedmar E, Halliday N, James EK, Camara M, Venturi V. 2013. Regulon studies and in planta role of the BraI/R quorum-sensing system in the plant-beneficial Burkholderia cluster. Applied and Environmental Microbiology. 79:4421-4432.

Tilsner J, Linnik O, Louveaux M, Roberts IM, Chapman SN, Oparka KJ. 2013. Replication and trafficking of a plant virus are coupled at the entrances of plasmodesmata. Journal of Cell Biology. 201:981-995.

Jupe F, Witek K, Verweij W, Sliwka J, Pritchard L, Etherington GJ, MacLean D, Cock PJ, Leggett RM, Bryan GJ et al.. 2013. Resistance gene enrichment sequencing (RenSeq) enables reannotation of the NB-LRR gene family from sequenced plant genomes and rapid mapping of resistance loci in segregating populations. Plant Journal. 76:530-544.

Pasare SA, Ducreux LJM, Morris WL, Campbell R, Sharma SK, Roumeliotis E, Kohlen W, van der Krol S, Bramley PM, Roberts AG et al.. 2013. The role of the potato (Solanum tuberosum L.) CCD8 gene in stolon and tuber development. New Phytologist. 198:1108-1120.

Rhind SM, Kyle CE, Ruffie H, Calmettes E, Osprey M, Zhang ZL, Hamilton D, McKenzie C. 2013. Short and long term temporal changes in soil concentrations of selected endocrine disrupting compounds (EDCs) following single or multiple applications of sewage sludge to pastures. Environmental Pollution. 181:262-270.

Podevin N, Davies HV, Hartung F, Nogue F, Casacuberta JM. 2013. Site-directed nucleases, a paradigm shift in predictable, knowledge-based plant breeding. Trends in Biotechnology. 31:373-383.

Cheke RA, Adranyi E, Cox JR, Farman DI, Magoma RN, Mbereki C, McWilliam AN, Mtobesya BN, van der Walte E. 2013. Soil contamination and persistence of pollutants following organophosphate sprays and explosions to control red-billed quelea (Quelea quelea). Pest Management Science. 69:386-396.

Salmela MJ, Cavers S, Cottrell JE, Iason GR, Ennos RA. 2013. Spring phenology shows genetic variation among and within populations in seedlings of Scots pine (Pinus sylvestris L.) in the Scotish Highlands. Plant Ecology and Diversity. 6:523-536.

Bragard C, Caciagli P, Lemaire O, Lopez-Moya JJ, MacFarlane S, Peters D, Susi P, Torrance L. 2013. Status and prospects of plant virus control through interference with vector transmission. Annual Review of Phytopathology, 51,177-201.. 51:177-201.

Tondelli A, Xu X, Moragues M, Sharma R, Schnaithmann F, Ingvardsen C, Manninen O, Comadran J, Russell J, Waugh R et al.. 2013. Structural and temporal variation in genetic diversity of European spring two-row barley cultivars and association mapping of quantitative traits. Plant Genome. 6

Pasare S, Wright K, Campbell R, Morris WL, Ducreux LJM, Chapman S, Bramley PM, Fraser PD, Roberts AG, Taylor MA. 2013. The sub-cellular localisation of the potato (Solanum tuberosum L.) carotenoid biosynthetic enzymes, CrtRb2 and PSY2. Protoplasma. 250:1381-1392.

O'Malley-James JT, Greaves JS, Raven JA, Cockell CS. 2013. Swansong biospheres: refuges for life and novel microbial biospheres on terrestrial planets near the end of their habitable lifetimes. International Journal of Astrobiology. 12:99-112.

Sargent F, Davidson FA, Kelly CL, Binny R, Christodoulides N, Gibson D, Johansson E, Kozyrska K, Lado LL, MacCallum J et al.. 2013. A synthetic system for expression of components of a bacterial microcompartment. Microbiology-SGM. 159:2427-2436.

Koljalg U, Nilsson RH, Abarenkov K, Tedersoo L, Taylor AFS, Bahram M, Bates ST, Bruns TD, Bengtsson-Palme J, Callaghan TM et al.. 2013. Towards a unified paradigm for sequence-based identification of fungi. Molecular Ecology. 22:5271-5277.

Duc C, Sherstnev A, Cole C, Barton GJ, Simpson GG. 2013. Transcription termination and chimeric RNA formation controlled by Arabidopsis thaliana FPA. PLoS Genetics. 9:e1003867.

Babikova Z, Gilbert L, Bruce TJA, Birkett M, Caulfield JC, Woodcock C, Pickett JA, Johnson D. 2013. Underground signals carried through common mycelial networks warn neighbouring plants of aphid attack. Ecology Letters. 16:835-843.

Milne I, Stephen G, Bayer MM, Cock PJA, Pritchard L, Cardle L, Shaw P, Marshall DF. 2013. Using Tablet for visual exploration of second generation sequencing data. Briefings in Bioinformatics. 14:193-202.

Van Kuren AT, Boag B, Hruban E, Cattadori IM. 2013. Variability in the intensity of nematode larvae from gastrointestinal tissues of a natural herbivore. Parasitology. 140:632-640.

Houston K, McKim S, Comadran J, Bonar N, Druka I, Uzrek E, Cirillo E, Guzy-Wrobelska J, Collins N, Halpin C et al.. 2013. Variation in the interaction between alleles of HvAPETALA2 and microRNA172 determines the density of grains on the barley inflorescence. Proceedings of the National Academy of Sciences of the USA. 110:16675-16680.

Haggarty P, Campbell DM, Knox S, Horgan GW, Hoad G, Boulton E, McNeill G, Wallace AM. 2013. Vitamin D in pregnancy at high latitude in Scotland. British Journal of Nutrition. 109:898-905.

Koichi K, Cottrell A, Sangha KK, Gordon IJ. 2013. What determines the acceptability of wildlife control methods? A case of feral pig management in the wet tropics world heritage area, Australia Human Dimensions of Wildlife. 18:97-108.

Dawson IK, Guariguata MR, Loo J, Weber JC, Lengkeek A, Bush D, Cornelius J, Guarino L, Kindt R, Orwa C et al.. 2013. What is the relevance of smallholders' agroforestry systems for conserving tropical tree species and genetic diversity in circa situm, in situ and ex situ settings? A review Biodiversity and Conservation. 22:301-324.

2014

Tondelli A, Pagani D, Ghafoori IN, Rahimi M, Ataei R, Rizza F, Flavell AJ, Cattivelli L. 2014. Allelic variation at Fr-H1/Vrn-H1 and Fr-H2 loci is the main determinant of frost tolerance in spring barley. Environmental and Experimental Botany. 106:148-155.

De Maayer P, Chan WY, Rubagotti E, Venter SN, Toth IK, Birch PRJ, Coutinho TA. 2014. Analysis of the Pantoea ananatis pan-genome reveals factors underlying its ability to colonize and interact with plant, insect and vertebrate hosts. BMC Genomics. 15:404.

Simpson CG, Lewandowska D, Liney M, Davidson D, Chapman S, Fuller J, McNicol J, Shaw P, Brown JWS. 2014. Arabidopsis PTB1 and PTB2 proteins negatively regulate splicing of a mini-exon splicing reporter and affect alternative splicing of endogenous genes differentially. New Phytologist. 203:424-436.

Mitchell RJ, Beaton JK, Bellamy PE, Broome A, Chetcuti J, Eaton S, Ellis CJ, Gimona A, Harmer R, Hester AJ et al.. 2014. Ash dieback in the UK: a review of the ecological and conservation implications and potential management options. Biological Conservation. 175:95-109.

Helliwell RC, Wright RF, Jackson-Blake LA, Ferrier RC, Aherne J, Cosby BJL, Evans CD, Forsius M, Hruska J, Jenkins A et al.. 2014. Assessing recovery from acidification of European surface waters in the year 2010: evaluation of projections made with the MAGIC model in 1995. Environmental Science and Technology. 48:13280-13288.

Beesley L, Inneh OS, Norton GJ, Moreno-Jimenez E, Pardo T, Clemente R, Dawson JJC. 2014. Assessing the influence of compost and biochar amendments on the mobility and toxicity of metals and arsenic in a naturally contaminated mine soil. Environmental Pollution. 186:195-202.

Cammarano D, Fitzgerald GJ, Casa R, Basso B. 2014. Assessing the robustness of vegetation indices to estimate wheat N in Mediterranean environments. Remote Sensing. 6:2827-2844.

Vinten AJA, Loades K, Addy S, Richards S, Stutter MI, Cook Y, Watson H, Taylor C, Abel C, Baggaley N et al.. 2014. Assessment of the use of sediment fences for control of erosion and sediment phosphorus loss after potato harvesting on sloping land. Science of the Total Environment. 468-469:1234-1244.

Tipping E, Benham S, Boyle JF, Crow P, Davies J, Fischer U, Guyatt H, Helliwell RC, Jackson-Blake L, Lawlor AJ et al.. 2014. Atmospheric deposition of phosphorus to land and freshwater. Environmental Science: Processes and Impacts. 16:1608-1617.

Banwart S, Black HIJ, Cai ZC, Gicheru P, Joosten H, Victoria R, Milne E, Noellemeyer E, Pascual U, Nziguheba G et al.. 2014. Benefits of soil carbon: report on the outcomes of an international scientific committee on problems of the environment rapid assessment workshop. Carbon Management. 5:185-192.

Liu WYY, Ridgway HJ, James TK, James EK, Chen WM, Sprent JI, Young JPW, Andrews M. 2014. Burkholderia sp. induces functional nodules on the South African invasive legume Dipogon lignosus (Phaseoleae) in New Zealand soils. Microbial Ecology. 68:542-555.

Benvenutti MA, Coates DB, Bindelle J, Poppi DP, Gordon IJ. 2014. Can faecal markers detect a short term reduction in forage intake by cattle? Animal Feed Science and Technology. 194:44-57.

Calladine J, Pakeman RJ, Humphreys E, Huband S, Fuller RJ. 2014. Changes in breeding wader assemblages, vegetation and land use within machair environments over three decades. Bird Study. 61:287-300.

Kikuchi T, Cock PJA, Helder J, Jones JT. 2014. Characterisation of the transcriptome of Aphelenchoides besseyi and identification of a GHF 45 cellulase. Nematology. 16:99-107.

Canton GJ, Konrad JL, Moore DP, Caspe SG, Palarea-Albaladejo J, Campero CM, Chianini F. 2014. Characterization of immune cell infiltration in the placentome of water buffaloes (Bubalus bubalis) infected with Neospora caninum during pregnancy. Journal of Comparative Pathology. 150:463-468.

Mayer KFX, Rogers J, Dolezel J, Pozniak C, Eversole K, Feuillet C, Gill B, Friebe B, Lukaszewski AJ, Sourdille P et al.. 2014. A chromosome-based draft sequence of the hexaploid bread wheat (Triticum aestivum) genome. Science. 345

Bizikova L, Crawford E, Nijnik M, Swart R. 2014. Climate change adaptation planning in agriculture: processes, experiences and lessons learned from early adapters. Mitigation and Adaptation Strategies for Global Change. 19:411-430.

Gotts NM, Polhill JG, Craig T, Galan-Diaz C. 2014. Combining diverse data sources for CEDSS, an agent-based model of domestic energy demand. Structure and Dynamics: eJournal of Anthropological and Related Sciences. 7

Moller S, Afgan E, Banck M, Bonnal RJP, Booth T, Chilton J, Cock PJA, Gumbel M, Harris N, Holland R et al.. 2014. Community-driven development for computational biology at Sprints, Hackathons and Codefests. BMC Bioinformatics. Suppl 14

Shyntum DY, Venter SN, Moleleki LN, Toth I, Coutinho TA. 2014. Comparative genomics of type VI secretion systems in strains of Pantoea ananatis from different environments. BMC Genomics. 15:ArticleNo163.

Brown I, Castellazzi M, Feliciano D. 2014. Comparing path dependence and spatial targeting of land use in implementing climate change responses. Land. 3:850-873.

Brown EM, Nitecki S, Pereira-Caro G, McDougall GJ, Stewart D, Rowland I, Crozier A, Gill CIR. 2014. Comparison of in vivo and in vitro digestion on polyphenol composition in lingonberries: potential impact on colonic health. Biofactors. 40:611-623.

Moulin L, Klonowska A, Bournaud C, Booth K, Vriezen JAC, Melkonian R, James EK, Young JPW, Bena G, Hauser L et al.. 2014. Complete genome sequence of Burkholderia phymatum STM815T, a broad host range and efficient nitrogen-fixing symbiont of Mimosa species. Standards in Genomic Sciences. 9

Rowland LJ, Ogden EL, Bassil N, Buck EJ, McCallum S, Graham J, Brown A, Wiedow C, Campbell AM, Haynes KG et al.. 2014. Construction of a genetic linkage map of an interspecific diploid blueberry population and identification of QTL for chilling requirement and cold hardiness. Molecular Breeding. 34:2033-2048.

Schoeb CS, Callaway RM, Anthelme F, Brooker RW, Cavieres LA, Kikvidze Z, Lortie CJ, Michalet R, Pugnaire FI, Xiao S et al.. 2014. The context dependence of beneficiary feedback effects in plant facilitations. New Phytologist. 204:386-396.

Addy S, Cooksley SL, Sime I. 2014. Corrigendum to impacts of flow regulation on freshwater pearl mussel (Margaritifera margaritifera) habitat in a Scottish montane river [Sci. Total Environ. 432 (2012) 318-328]. Science of The Total Environment. 475:155-155.

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