Publications list
Filters: First Letter Of Last Name is C [Clear All Filters]
Tracking (poly)phenol components from raspberries in ileal fluid. Journal of Agricultural and Food Chemistry. 62:7631-7641.
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2014.
A trade off between mlo resistance to powdery mildew and increased susceptibility of barley to a newly important disease, Ramularia leaf spot. Journal of Experimental Botany. 65:1025-1037.
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2014.
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2014.
The transcriptome of Nacobbus aberrans reveals insights into the evolution of sedentary endoparasitism in plant-parasitic nematodes. Genome Biology and Evolution. 6:2181-2194.
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2014.
Transformation of vanadinite (Pb5(VO4)3Cl) by fungi. Environmental Microbiology. Published online..
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2014.
tropiTree: an NGS-based EST-SSR resource for 24 tropical tree species. PLoS ONE. 9:e102502.
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2014.
Unearthing the picturesque: the validity of the preference matrix as a measure of landscape aesthetics. Landscape and Urban Planning. 124:1-13.
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2014.
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2014.
Use of wild genotypes in breeding program increases strawberry fruit sensorial and nutritional quality. Journal of Agricultural and Food Chemistry. 62:3944-3953.
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2014.
Acidophilic denitrifiers dominate the N2O production in a 100-year-old tea orchard soil. Environmental Science and Pollution Research. 22:4173-4182.
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2015.
An agent-based model for simulating environmental behavior in an educational organization. Neural Processing Letters. 42:89-118.
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2015.
The AKIS concept and its relevance in selected EU member states. Outlook on Agriculture.
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2015.
Application of long-chain alcohols as diet-composition markers in sheep fed on grass-white clover and heather-gorse plant species. Grass and Forage Science. 70:30-43.
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2015.
Assessing biogas digestate, pot ale, wood ash and rockdust as soil amendments: effects on soil chemistry and microbial community composition. Acta Agriculturae Scandinavica, Section B: Soil and Plant Science.
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2015.
Assessing changes in carbon stocks of Scottish soils: lessons learnt. Earth and Environmental Science. 25:ArticleNo.01201.
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2015.
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2015.
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2015.
Burkholderia dipogonis sp. Nov., isolated from root nodules of Dipogon lignosus in New Zealand and Western Australia. International Journal of Systematic and Evolutionary Microbiology. 65:4716-4723.
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2015.
C-13 PLFAs: a key to open the soil microbial black box? Plant and Soil. 392:3-15.
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2015.
Calluna vulgaris-dominated upland heathland sequesters more CO2 annually than grass-dominated upland heathland. Science of the Total Environment.. 505:740-747.
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2015.
Can fuzzy cognitive mapping help in agricultural policy design and communication? Land Use Policy. 45:64-75.
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2015.
Can Hymenoscyphus fraxineus infect hardy members of the Oleaceae other than ash species? Forest Pathology. 45:426-429.
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2015.
Can macrophyte harvesting from eutrophic water close the loop on nutrient loss from agricultural land? Journal of Environmental Management. 152:210-217.
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2015.
Can policy be risk-based? The cultural theory of risk and the case of livestock disease containment Sociologia Ruralis. 55:379-399.
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2015.
Can scenario-planning support community based natural resource management? Experiences from three countries in Latin America Ecology and Society. 20:ArticleNo.28.
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2015.
Changes in climate variability with reference to land quality and agriculture in Scotland. International Journal of Biometeorology. 59:717-732.
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2015.
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2015.
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2015.
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2015.
Conversion of lowland tropical forests to tree cash crop plantations loses up to one-half of stored soil organic carbon. Proceedings of the National Academy of Sciences of the United States of America (PNAS). 112:9956-9960.
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2015.
Could land-based early photosynthesizing ecosystems have bioengineered the planet in mid-Palaeozoic times? Palaeontology. 58:803-837.
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2015.
Deterministic processes vary during community assembly for ecologically dissimilar taxa. Nature Communications. 6
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2015.
Distinct circular single-stranded DNA viruses exist in different soil types. Applied and Environmental Microbiology. 81:3934-3945.
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2015.
Distributions of carbon and nitrogen isotopes in Scotland's topsoil: a national-scale study. European Journal of Soil Science. 66:1002-1011.
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2015.
Does decadal climate variation influence Wheat and Maize production in the southeast USA? Agricultural Forest Meteorology. 204:1-9.
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2015.
The effect of storage on microbial activity and community structure of drained and flooded paddy soils. Journal of Soils and Sediments. 15:880-889.
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2015.
The effect of temperature on the male and female recombination landscape of barley. New Phytologist. 208:421-429.
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2015.
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2015.
The effects of drought stress on leaf gene expression during flowering in blackcurrant (Ribes nigrum L.). European Journal of Horticultural Science. 80:39-46.
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2015.
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2015.
Effects of increased day and night temperature with supplemental infrared heating on winter wheat growth in North China. European Journal of Agronomy. 64:67-77.
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2015.
Effects of temperature, rainfall and conifer felling practices on the surface water chemistry of northern peatlands. Biogeochemistry. 126:343-362.
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2015.
Evolution of the seed dispersal system in barley. Cell. 162:527-539.
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2015.
Evolutionary relationships among barley and Arabidopsis core circadian clock and clock-associated genes. Journal of Molecular Evolution. 80:108-119.
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2015.
An exploration of the longer-term impacts of community participation in rural health services design. Social Science and Medicine. 141:64-71.
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2015.
Fungal bioweathering of mimetite and a general geomycological model for lead apatite mineral biotransformations. Applied and Environmental Microbiology. 81:4955-4964.
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2015.
Genetic linkage mapping of economically important traits in cultivated tetraploid potato (Solanum tuberosum L.). G3-Genes Genomes Genetics. 5:2357-2364.
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2015.
Global Research Alliance Modelling Platform (GRAMP): An open web platform for modelling greenhouse gas emissions from agro-ecosystems. Computers and Electronics in Agriculture. 111:112-120.
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2015.
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2015.
High-nature-value grasslands have the capacity to cope with nutrient impoverishment induced by mowing and livestock grazing. Journal of Applied Ecology. 52:1073-1081.
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2015.
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2015.
Improving intercropping: a synthesis of research in agronomy, plant physiology and ecology. New Phytologist. 206:107-117.
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2015.
Inferring influenza dynamics and control in households. Proceedings of the National Academy of Sciences of the United States of America (PNAS). 112:9094-9099.
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2015.
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2015.
Lichen response to ammonia deposition defines the footprint of a penguin rookery. Biogeochemistry. 122:295-311.
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2015.
Mapping earthworm communities in Europe. Applied Soil Ecology. 97:98-111.
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2015.
Mapping soil carbon stocks across Scotland using a neural network model. Geoderma. 262:187-188.
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2015.
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2015.
Mind the gap-deficits in our knowledge of aspects impacting the bioavailability of phytochemicals and their metabolites - a position paper focusing on carotenoids and polyphenols. Molecular Nutrition and Food Research. 59:1307-1323.
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2015.
Mitigating arable soil compaction: A review and analysis of available cost and benefit data. Soil and Tillage Research. 146:10-25.
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2015.
Molecular analysis of Phytophthora diversity in nursery-grown ornamental and fruit plants. Plant Pathology. 64:1308-1319.
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2015.
Multimodel ensembles of wheat growth: many models are better than one. Global Change Biology. 21:911-925.
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2015.
NCBI BLASTplus integrated into Galaxy. Technical note. GigaScience. 4
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2015.
Network analyses reveal novel aspects of ALS pathogenesis. PLoS Genetics. 11:e1005107.
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2015.
Newly identified RNAs of raspberry leaf blotch virus encoding a related group of proteins. Journal of General Virology. 96:3432-3439.
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2015.
Nitrogen deficiency in barley (Hordeum vulgare) seedlings induces molecular and metabolic adjustments that trigger aphid resistance. Journal of Experimental Botany.. 66:3639-3655.
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2015.
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2015.
Occurrence of priming in the degradation of lignocellulose in marine sediments. PLoS ONE. 10:e0143917.
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2015.
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2015.
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2015.
Pantoea ananatis utilizes a type VI secretion system for pathogenesis and bacterial competition. Molecular Plant-Microbe Interactions. 28:420-431.
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2015.
Phenolic compounds in blackcurrant (Ribes nigrum L.) leaves relative to leaf position and harvest date. Food Chemistry. 172:135-142.
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2015.
Plant lignin content altered by soil microbial community. New Phytologist. 206:166-174.
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2015.
Predicting Scottish topsoil organic matter content from colour and environmental factors. European Journal of Soil Science. 66:112-120.
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2015.
Probing soil physical and biological resilience data from a broad sampling of arable farms in Scotland. Soil Use and Management. 31:491-503.
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2015.
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2015.
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2015.
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2015.
Rising temperatures reduce global wheat production. Nature Climate Change. 5:143-147.
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2015.
Root anatomical phenes predict root penetration ability and biomechanical properties in maize (Zea Mays). Journal of Experimental Botany. 66:3151-3162.
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2015.
Scotland's hydropower: Current capacity, future potential and the possible impacts of climate change. Renewable and Sustainable Energy Reviews. 52:111-122.
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2015.
Seed dispersal by ungulates as an ecological filter: a trait-based meta-analysis. Oikos. 124:1109-1120.
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2015.
Selection footprints in barley breeding lines detected by combining genotyping-by-sequencing with reference genome information. Molecular Breeding. 35:Article11.
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2015.
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2015.
Soil spectroscopy: an alternative to wet chemistry for soil monitoring. Advances in Agronomy. 132:139-159.
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2015.
The spliceosome assembly factor GEMIN2 attenuates the effects of temperature on alternative splicing and circadian rhythms. Proceedings of the National Academy of Sciences of the United States of America (PNAS). 112:9382-9387.
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2015.
A statistical analysis of ensembles of crop model responses to climate change factors. Agricultural and Forest Meteorology. 214:483-493.
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2015.
Striking a balance between in-person care and the deployment of eHealth to support the older rural population with chronic pain. International Journal of Qualitative Studies on Health and Well-Being. 10
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2015.
Surface flux patterns on planets in circumbinary systems and potential for photosynthesis. International Journal of Astrobiology. 14:465-478.
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2015.
Symbiotic diversity, specificity and distribution of rhizobia in native legumes of the Core Cape Subregion (South Africa). FEMS Microbiology Ecology. 91:1-17.
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2015.
Synergies and conflicts in the use of policy and planning instruments for implementing forest and woodland corridors and networks; a case study in NE Scotland. Forest Policy and Economics. 57:47-64.
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2015.
Technology for older adults: maximising personal and social interaction: exploring opportunities for eHealth to support the older rural population with chronic pain. Scottish Geographical Journal. 131:181-193.
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2015.
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2015.
The top 10 oomycete pathogens in molecular plant pathology. Molecular Plant Pathology. 16:413-434.
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2015.
Towards an understanding of the control of 'crumbly' fruit in red raspberry. SpringerPlus. 4:223.
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2015.
A transdisciplinary approach to the economic analysis of the European Water Framework Directive. Ecological Economics. 116:34-45.
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2015.
Trophy hunters' willingness to pay for wildlife conservation and community benefits. Conservation Biology. 29:1111-1121.
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2015.
A two-point method for determining the soil water characteristic of typical northern temperate boreal soils. Geoderma Regional. 5:71-76.
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2015.
Uranium phosphate biomineralization by fungi. Environmental Microbiology. 17:2064-2075.
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2015.
Using visible and near infrared spectroscopy to estimate carbonates and gypsum in soils in arid and subhumid regions of Isfahan, Iran. Journal of Near Infrared Spectroscopy. 23:155-165.
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2015.
Vaccination of pigs with the S48 strain of Toxoplasma gondii - safer meat for human consumption. Veterinary Research. 46
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2015.
Variability of effects of spatial climate data aggregation on regional yield simulation by crop models. Climate Research. 65:53-69.
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2015.
Visualisation techniques to support public interpretation of future climate change and land use choices: a case study from N-E Scotland. International Journal of Digital Earth. Published online.
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2015.
Waste recovered by-products can increase growth of grass-clover mixtures in low fertility soils and alter botanical and mineral nutrient composition. Annals of Applied Biology. 166:105-117.
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2015.
Wear fast, die young: more worn teeth and shorter lives in Iberian compared to Scottish red deer. PLoS ONE. 10:e0134788.
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2015.
WHIRLY1 functions in the control of responses to nitrogen deficiency but not aphid infestation in barley. Plant Physiology. 168:1140-1151.
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2015.
Why genomics research on Pectobacterium and Dickeya makes a difference. American Journal of Potato Research. 92:218-222.
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2015.
Y Species composition of coastal dune vegetation in Scotland has proved resistant to climate change over a third of a century. Global Change Biology. 21:3738-3747.
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2015.
The 2015 Bioinformatics Open Source Conference (BOSC 2015). PLoS Computational Biology. 12:e1004691.
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2016.
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2016.
Adaptation of water resources systems to changing society and environment: a statement by the International Association of Hydrological Sciences. Hydrological Sciences Journal. 61:2803-2817.
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2016.
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2016.
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2016.
Are rural residents happier? A quantitative analysis of subjective wellbeing in Scotland Journal of Rural Studies. 44:37-45.
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2016.
Bats like vintage: managing exotic eucalypt plantations for bat conservation in a Mediterranean landscape. Animal Conservation. 19:53-64.
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2016.
Behavioral buffering of extreme weather events in a high- Arctic herbivore. Ecosphere. 7:1-13.
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2016.
Behavioral buffering of extreme weather events in a high- Arctic herbivore. Ecosphere. 7:ArticleNo.e01374..
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2016.
Biogeographical patterns of legume-nodulating Burkholderia spp.: from African Fynbos to continental scales. Applied and Environmental Microbiology. 82:5099-5115.
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2016.
Cajal bodies and their role in plant stress and disease responses. RNA Biology. 14:779-790.
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2016.
Changing climate and nutrient transfers: Evidence from high temporal resolution concentration-flow dynamics in headwater catchments. Science of the Total Environment. 548:325-339.
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2016.
Chapter one - Plant-microbiota interactions as a driver of the mineral turnover in the rhizosphere. Advances in Applied Microbiology. 95:1-67.
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2016.
Characterization of immune system cell subsets in fixed tissues from alpine chamois (Rupicapra rupicapra). Journal of Comparative Pathology. 155:207-212.
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2016.
Characterization of the papilionoid-Burkholderia interaction in the Fynbos biome: the diversity and distribution of beta-rhizobia nodulating Podalyria calyptrata (Fabaceae, Podalyrieae). Systematic and Applied Microbiology. 39:41-48.
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2016.
Cohort variation in individual body mass dissipates with age in large herbivores. Ecological Monographs. 86:517-543.
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2016.
Cohort variation in individual body mass dissipates with age in large herbivores. Ecological Monographs. 86:517-543.
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2016.
Community participation for rural healthcare design: description and critique of a method. Health and Social Care in the Community. 24:175-183.
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2016.
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2016.
The contribution of farm-scale experiments to the understanding of soil processes and implications for ecosystem services. Guest Editors' introduction. European Journal of Soil Science. 67:359.
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2016.
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2016.
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2016.
Defoliation patterns and their implications for the management of vegetative tropical pastures to control intake and diet quality by cattle. Grass and Forage Science. 71:424-436.
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2016.
Depicting how Eucalyptus globulus survives drought: involvement of redox and DNA methylation events. Functional Plant Biology. 43:838-850.
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2016.
Determination of zeolite-group mineral compositions by electron probe microanalysis. Mineralogical Magazine. 80:781-807.
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2016.
Does nature conservation enhance ecosystem services delivery? Ecosystem Services. 17:152-162.
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2016.
Earth's air pressure 2.7 billion years ago constrained to less than half of modern levels. Nature Geoscience. Published online..
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2016.
Earth's air pressure 2.7 billion years ago constrained to less than half of modern levels. Nature Geoscience. 9:448-451.
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2016.
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2016.
Effect of rice straw application on microbial community and activity in paddy soil under different water status. Environmental Science and Pollution Research. 23:5941-5948.
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2016.
Effect of rice straw application on microbial community and activity in paddy soil under different water status. Environmental Science and Pollution Research. 23:5941-5948.
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2016.
The effectiveness of old and new strategies for the long-term control of Pteridium aquilinum, an 8-year test. Weed Research. 56:247-257.
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2016.
Effects of landscape configuration on mapping ecosystem service capacity: a review of evidence and a case study in Scotland. Landscape Ecology. 31:1457-1479.
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2016.
Effects of manure and mineral fertilization strategies on soil antibiotic resistance gene levels and microbial community in a paddy-upland rotation system. Environmental Pollution. 211:332-337.
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2016.
Effects of manure and mineral fertilization strategies on soil antibiotic resistance gene levels and microbial community in a paddy-upland rotation system. Environmental Pollution. 211:332-337.
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2016.
Endemic Mimosa species from Mexico prefer alphaproteobacterial rhizobial symbionts. New Phytologist. 209:319-333.
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2016.
The Enhanced Vegetation Index (EVI) as a proxy for diet quality and composition in a mountain ungulate. Ecological Indicators. 61:658-666.
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2016.
Environmental and economic benefits of variable rate nitrogen fertilization in a nitrate vulnerable zone. Science of the Total Environment. 545:227-235.
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2016.
Environmental and gentic factors associated with solanesol accumulation in potato leaves. Frontiers in Plant Science. 7
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2016.
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2016.
Evaluating the precision of eight spatial sampling schemes in estimating regional means of simulated yield for two crops. Environmental Modelling and Software. 80:100-112.
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2016.
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2016.
Exome sequencing of geographically diverse barley landraces and wild relatives gives insights into environmental adaptation. Nature Genetics. 49:1024-1030.
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2016.
Factors influencing the development of black dot (Colletotrichum coccodes) on potato. Plant Pathology. 65:1484-1491.
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2016.
FALDO: a semantic standard for describing the location of nucleotide and protein feature annotation. Journal of Biomedical Semantics. 7
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2016.
The fetal ovary exhibits temporal sensitivity to a "real-life" mixture of environmental chemicals. Scientific Reports. 6:22279.
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2016.
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2016.
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2016.
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2016.
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2016.
Genomic selection in multi-environment crop trials. G3- Genes Genomes Genetics. 6:1313-1326.
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2016.
Greenspace matters: exploring links between greenspace, gender and well-being with conservation volunteers. Landscape Research. 41:641-651.
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2016.
A holistic approach to understanding the desorption of phosphorus in soils. Environmental Science and Technology. 50:3371-3381.
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2016.
Host immunity shapes the impact of climate changes on the dynamics of parasite infections. Proceedings of the National Academy of Sciences of the United States of America (PNAS). 113:2970-2975.
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2016.
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2016.
Identification and characterization of parasitism genes from the pinewood nematode Bursaphelenchus xylophilus reveals a multilayered detoxification strategy. Molecular Plant Pathology. 17:286-295.
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2016.
Impact of spatial soil and climate input data aggregation on regional yield simulations. PLoS ONE. 11:e0151782.
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2016.
Incorporation of C-13-labelled rice rhizodeposition into soil microbial communities under different fertilizer applications. Applied Soil Ecology. 101:11-19.
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2016.
Inhibition of cathepsin B by caspase-3 inhibitors blocks programmed cell death in Arabidopsis. Cell Death and Differentiation. 23:1493-1501.
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2016.
The INtegrated CAtchment model of phosphorus dynamics (INCA-P): Description and demonstration of new model structure and equations. Environmental Modelling and Software. 83:356-386.
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2016.
Integrated proteomics and metabolomics to unlock global and clonal responses of Eucalyptus globulus recovery from water deficit. Metabolomics. 12:ArticleNo.141.
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2016.
Integrating sediment biogeochemistry into 3D oceanic models: A study of benthic-pelagic coupling in the Black Sea. Ocean Modelling. 101:83-100.
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2016.
Integrating sediment biogeochemistry into 3D oceanic models: a study of benthic-pelagic coupling in the Black Sea. Ocean Modelling. 101:83-100.
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2016.
Inter-cultivar variation in soil-to-plant transfer of radiocaesium and radiostrontium in Brassica oleracea. Journal of Environmental Radioactivity. 155:112-121.
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2016.
Inter-pregnancy weight change and the risk of recurrent pregnancy complications. PLoS ONE. 11:e0154812.
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2016.
Investigation of salicylate hepatic responses in comparison with chemical analogues of the drug. Biochimica et Biophysica Acta - Molecular Basis of Disease. 1862:1412-1422.
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2016.
Lattice Boltzmann method for the fractional advection-diffusion equation. Physical Review E. 93:ArticleNo.043310.
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2016.
Life at the boundary: photosynthesis at the soil-fluid interface. A synthesis focusing on mosses. Journal of Experimental Botany. 67:1613-1623.
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2016.
Long-term impacts of nitrogen deposition on coastal plant communities. Environmental Pollution. 221:337-347.
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2016.
Long-term macronutrient stoichiometry of UK ombrotrophic peatlands. Science of the Total Environment. 572:1561-1572.
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2016.
Mapping earthworm communities in Europe. Applied Soil Ecology. 97:98-111.
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2016.
Mapping soil carbon stocks across Scotland using a neural network model. Geoderma. 262:187-188.
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2016.
Metabarcoding analysis of phytophthora diversity using genus-specific primers and 454 pyrosequencing. Phytopathology. 106:305-313.
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2016.
A method-centric 'User Manual' for the mitigation of diffuse water pollution from agriculture. Soil Use and Management. 32:162-171.
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2016.
A methodological approach to understanding the wellbeing and restorative benefits associated with greenspace. Urban Forestry and Urban Greening. 19:103-109.
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2016.
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2016.
Microbial diversity drives multifunctionality in terrestrial ecosystems. Nature Communications. 7
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2016.
Microbial utilization of rice straw and its derived biochar in a paddy soil. Science of the Total Environment.
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2016.
The mineralisation of dissolved organic matter recovered from temperate waterbodies during summer. Aquatic Sciences. 78:447-482.
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2016.
Mineralogy and biogeochemistry of potassium in the Skogaby experimental forest, southwest Sweden: pools, fluxes and K/Rb ratios in soil and biomass. Biogeochemistry. Published online..
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2016.
Modelling nitrous oxide emissions from mown-grass and grain-cropping systems: Testing and sensitivity analysis of DailyDayCent using high frequency measurements. Science of the Total Environment. 572:955-977.
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2016.
Modelling small area at-risk-of-poverty rates for the UK using the World Bank methodology and the EU-SILC. Applied Spatial Analysis and Policy. 9:97-117.
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2016.
Moire as a low-cost, robust, optical-technique to quantify soil surface condition. Soil and Tillage Research. 158:147-155.
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2016.
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2016.
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2016.
Multi-wheat-model ensemble responses to interannual climate variability. Environmental Modelling and Software. 81:86-101.
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2016.
No evidence for extensive horizontal gene transfer in the genome of the tardigrade Hypsibius dujardini. Proceedings of the National Academy of Sciences of the United States of America. 1135053
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2016.
Nutritional and phytochemical content of high-protein crops. Journal of Agricultural and Food Chemistry. 64:7800-7811.
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2016.
Organic matter chemistry controls greenhouse gas emissions from permafrost peatlands. Soil Biology and Biochemistry. 98:42-53.
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2016.
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2016.
Phosphatase-mediated bioprecipitation of lead by soil fungi. Environmental Microbiology. 18:219-231.
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2016.
Phylogenetic diversity of ceftriaxone resistance and the presence of extended-spectrum beta-lactamase genes in the culturable soil resistome. Journal of Global Antimicrobial Resistance.
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2016.