Publications list
Filters: First Letter Of Last Name is C [Clear All Filters]
Evaluating the utility of N-15 and O-18 isotope abundance analyses to identify nitrate sources: a soil zone study. Water Research. 46:3723-3736.
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2012.
Evaluating the precision of eight spatial sampling schemes in estimating regional means of simulated yield for two crops. Environmental Modelling and Software. 80:100-112.
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2016.
Evaluating the performance of horizontal sub-surface flow constructed wetlands: a case study from southern India. Ecological Engineering Journal. 162:ArticleNo.106170.
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2021.
Evaluating the impacts of climate variability and disturbance regimes on the historic carbon budget of a forest landscape. Agricultural and Forest Meteorology. 180:265-280.
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2013.
Europe-wide dampening of population cycles in keystone herbivores. Science. 340:63-66.
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2013.
Estimation of multiple transmission rates for epidemics in heterogeneous populations. Proceedings of the National Academy of Sciences, USA. 104:20392-20397. Abstract
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2007.
Estimation of maize canopy properties from remote sensing by inversion of 1-D and 4-D models. Precision Agriculture. 11:319-334.
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2010.
Estimating the annual number of breeding attempts from breeding dates using mixture models. Ecology Letters. 12:1184-1193.
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2009.
Estimating stomatal conductance with thermal imagery. Plant Cell and Environment. 29:1508-1518.
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2006.
Estimating greenhouse gases emissions from horticultural peat soils using a DNDC modelling approach. Journal of Environmental Management. 233:681-694.
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2019.
Estimating changes in Scottish soil carbon stocks using ECOSSE. II. Application. Climate Research. 45:179-192.
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2010.
Estimating changes in Scottish soil carbon stocks using ECOSSE. I. Model description and uncertainties. Climate Research. 45:179-192.
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2010.
Essay - The role of ecological theory in microbial ecology. Nature Reviews Microbiology. 5(5):384-392.
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2007.
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2007.
Escherichia coli O157:H7 transcriptome datasets for comparison of RNA-seq and microarray platforms. Data in Brief. 22:126-131.
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2019.
Error propagation in measured streamflow and water quality data for small rural watersheds. Transactions of the American Society of Agricultural Engineers. 49:689-701.
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2006.
An eQTL analysis of partial resistance to Puccinia hordei in barley. PLoS One. 5:-e8598.
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2010.
Epigenetic remodeling of meiotic crossover frequency in arabidopsis thaliana DNA methyltransferase mutants. PLoS Genetics. 8:e1002844.
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2012.
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2014.
Enzyme activities and microbial functional diversity in metal(loid) contaminated soils near to a copper smelter. Science of the Total Environment. 779:ArticleNo.146423.
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2021.
Environmental risk factors in the incidence of Johne's disease.l. Critical Reviews in Microbiology..
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2014.
Environmental incomes: Refined standard and extended accounts applied to cork oak open woodlands in Andalusia, Spain. Ecological Indicators. 117:ArticleNo.106551.
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2020.
Environmental drivers of the geographical distribution of methanotrophs: Insights from a national survey. Soil Biology and Biochemistry. 127:264-279.
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2018.
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2014.
Environmental DNA reveals links between abundance and composition of airborne grass pollen and respiratory health. Current Biology. 31:1995-2003.
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2021.
Environmental decision support systems (EDSS) development - challenges and best practices. Environmental Modelling and Software. 26:1389-1402.
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2011.
Environmental controls on coccolithophore calcification. Marine Ecology Progress Series. 470:137-166.
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2012.
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2016.
Environmental change impacts on the C- and N-cycle of European forests: a model comparison study. Biogeosciences. 10:1751-1773.
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2013.
Environmental attitudes and place identity as determinants of preferences for ecosystem services. Ecological Economics. 174:ArticleNo.106600.
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2020.
Environmental and spatial characterisation of bacterial community composition in soil to inform sampling strategies. Soil Biology and Biochemistry. 41(11):2292-2298.
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2009.
Environmental and gentic factors associated with solanesol accumulation in potato leaves. Frontiers in Plant Science. 7
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2016.
Environmental and economic benefits of variable rate nitrogen fertilization in a nitrate vulnerable zone. Science of the Total Environment. 545:227-235.
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2016.
The enigma of soil animal species diversity revisited: the role of small-scale heterogeneity. PLoS ONE. 5(7):e11567.
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2010.
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2010.
The Enhanced Vegetation Index (EVI) as a proxy for diet quality and composition in a mountain ungulate. Ecological Indicators. 61:658-666.
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2016.
Enhanced resistance and neutralization of defense responses by suppressors of RNA silencing. Virus Research. 130:103-109. Abstract
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2007.
Engineered resistance in potato against potato leafroll virus, potato virus A and potato virus Y. Virus Genes. 47:86-92.
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2013.
Engaging end-users to inform the development of a global standard for the identification of key biodiversity areas. Environmental Science and Policy. 89:273-282.
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2018.
Endoscopy as a novel method for assessing endoparasite burdens in free-ranging European shags (Phalacrocorax aristotelis). Methods in Ecology and Evolution. 4:207-216.
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2013.
The endophytic lifestyle of Escherichia coli O157:H7: quantification and internal localization in roots. Phytopathology. 103:333-340.
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2013.
Endophytic bacterial diversity in poplar trees growing on a btex-contaminated site: the characterisation of isolates with potential to enhance phytoremediation. Systematic and Applied Microbiology. 29(7):539-556.
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2006.
Endemic Mimosa species from Mexico prefer alphaproteobacterial rhizobial symbionts. New Phytologist. 209:319-333.
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2016.
Emergence of 13_A2 blue lineage of Phytophthora infestans was responsible for severe outbreaks of late blight on tomato in South-West India. Journal of Phytopathology. 161:49-58.
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2013.
Elevating crop disease resistance with cloned genes. Philosophical Transactions of the Royal Society B, Biological Sciences.. 369:ArticleNo20130087.
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2014.
Elevated CO2 effects on nitrogen assimilation and growth of C-3 vascular plants are similar regardless of N-form assimilated. Journal of Experimental Botany. 70:683-690.
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2019.
Elevated atmospheric carbon dioxide impairs the performance of root-feeding vine weevils by modifying root growth and secondary metabolites. Global Change Biology. 17:688-695.
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2011.
Elemental status (Cu, Mo, Co, B, S, and Zn) of Scottish agricultural soils compared with a soil-based risk assessment. Soil Use and Management. 28:167-176.
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2012.
Egg hatching and survival time of soil-dwelling insect larvae: a partial differential equation model and experimental validation. Ecological Modelling. 202:493-502. Abstract
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2007.
Efficient multiplex simple sequence repeat genotyping of the oomycete plant pathogen Phytophthora infestans. Journal of Microbiological Methods. 92:316-322.
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2013.
Efficient degradation of diclofenac sodium by periodate activation using Fe/Cu bimetallic modified sewage sludge biochar/UV system. Science of the Total Environment. 783:ArticleNo.146794.
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2021.
Efficiency of green waste compost and biochar soil amendments for reducing lead and copper mobility and uptake to ryegrass. Journal of Hazardous Materials. 191:41-48.
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2011.
Effects on weed and invertebrate abundance and diversity of herbicide management in genetically modified herbicide-tolerant winter-sown oilseed rape. Proceedings of the Royal Society of London, Series B. 272:463-474. Abstract
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2005.
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2008.
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2005.
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2012.
Effects of temperature, rainfall and conifer felling practices on the surface water chemistry of northern peatlands. Biogeochemistry. 126:343-362.
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2015.
Effects of successive seasons of genetically modified herbicide-tolerant maize cropping on weeds and invertebrates. Annals of Applied Biology. 149:249-254. Abstract
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2006.
The effects of sheep faeces on soil solution composition. Plant and Soil. 285(1-2):135-148.
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2006.
Effects of season and sediment-water exchange processes on the partitioning of pesticides in the catchment environment: Implications for pesticides monitoring. Science of the Total Environment. 698:ArticleNo.134228.
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2020.
Effects of pyrite sludge pollution on soil enzyme activities: Ecological dose-response model. Science of the Total Environment. 396:89-99. Abstract
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2008.
The effects of projected climate and climate extremes on a winter and summer crop in the southeast. Agricultural and Forest Meteorology. 248:109-118.
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2018.
Effects of methyl-deficient diets on methionine and homocysteine metabolism in the pregnant rat. American Journal of Physiology - Endocrinology and Metabolism. 302:E1531-E1540.
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2012.
Effects of manure and mineral fertilization strategies on soil antibiotic resistance gene levels and microbial community in a paddy-upland rotation system. Environmental Pollution. 211:332-337.
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2016.
Effects of manure and mineral fertilization strategies on soil antibiotic resistance gene levels and microbial community in a paddy-upland rotation system. Environmental Pollution. 211:332-337.
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2016.
Effects of management regime and plant species on the enzyme activity and genetic structure of N-fixing, denitrifying and nitrifying bacterial communities in grassland soils. Environmental Microbiology. 8(6):1005-1016.
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2006.
Effects of landscape configuration on mapping ecosystem service capacity: a review of evidence and a case study in Scotland. Landscape Ecology. 31:1457-1479.
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2016.
Effects of juice matrix and pasteurization on stability of black currant anthocyanins during storage. Journal of Food Science. 82:44-52.
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2017.
Effects of increased day and night temperature with supplemental infrared heating on winter wheat growth in North China. European Journal of Agronomy. 64:67-77.
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2015.
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2006.
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2015.
Effects of exposure to environmental chemicals during pregnancy on the development of the male and female reproductive axes. Reproduction in Domestic Animals. 47:15-22.
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2012.
The effects of ethylene, 1-MCP and AVG on sprouting in sweetpotato roots. Postharvest Biology and Technology. 85:89-93.
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2013.
Effects of environmental pollutants on the reproduction and welfare of ruminants. Animal. 4(7):1227-1239.
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2010.
The effects of drought stress on leaf gene expression during flowering in blackcurrant (Ribes nigrum L.). European Journal of Horticultural Science. 80:39-46.
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2015.
Effects of drought stress during flowering of two pot-grown blackcurrant (Ribes nigrum L.) cultivars. Scientia Horticulturae. 162:365-373.
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2013.
Effects of drought and shade on nitrogen cycling in the leavers and canopy of mediterranean Qurecus seedlings. Plant and Soil. 316:45-56.
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2009.
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2012.
Effects of CO2 on the searching behaviour of the root-feeding clover weevil Sitona lepidus (Coleoptera: Curculionidae). Bulletin of Entomological Research. 96:361-366. Abstract
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2006.
Effects of climate change on Cameroon crop production: Simulation results using GCM scenarios. Climate Research. 36:65-77.
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2008.
Effects of biofertilizer on soil microbial diversity and antibiotic resistance genes. Science of the Total Environment.
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2022.
Effects of ascertainment bias and marker number on estimations of barley diversity from high-throughput SNP genotype data. Theoretical and Applied Genetics. 120:1525-1534.
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2010.
The effects of arbuscular mycorrhizal fungal colonisation on nutrient status, growth, productivity, and canker resistance of apple (Malus pumila). Frontiers in Microbiology. 9:ArticleNo.1461.
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2018.
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2007.
Effects of a plant parasitic nematode (Heterodera trifolii) on clover roots and soil microbial communities. Biology and Fertility of Soils. 43(5):541-548.
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2007.
Effector-decoy pairs: another countermeasure emerging during host-microbe co-evolutionary arms races? Molecular Plant. 10:662-664.
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2017.
The effectiveness of old and new strategies for the long-term control of Pteridium aquilinum, an 8-year test. Weed Research. 56:247-257.
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2016.
Effectiveness of Calluna-heathland restoration methods after invasive plant control. Ecological Engineering. 54:218-226.
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2013.
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2015.
The effect of the transition between controlled atmosphere and regular atmosphere storage on bulbs of onion cultivars SS1, Carlos and Renate. Postharvest Biology and Technology. 44:228-239. Abstract
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2007.
The effect of temperature on the male and female recombination landscape of barley. New Phytologist. 208:421-429.
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2015.
The effect of storage on microbial activity and community structure of drained and flooded paddy soils. Journal of Soils and Sediments. 15:880-889.
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2015.
Effect of short-term exposure to high-temperature on total gene expression in the leaves of four raspberry (Rubus idaeus L.) cultivars. Journal of Horticultural Science and Biotechnology. 89:532-541.
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2014.
The effect of semi-dwarf genes on root system size in field-grown barley. Theoretical and Applied Genetics. 112:779-786. Abstract
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2006.
The effect of root exudates on rhizosphere water dynamics. Proceeding Royal Society A. 474:ArticleNo.20180149.
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2018.
The effect of root exudates on rhizosphere water dynamics. Proceeding Royal Society A. 474:ArticleNo.20180149.
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2018.
Effect of rice straw application on microbial community and activity in paddy soil under different water status. Environmental Science and Pollution Research. 23:5941-5948.
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2016.
Effect of rice straw application on microbial community and activity in paddy soil under different water status. Environmental Science and Pollution Research. 23:5941-5948.
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2016.
Effect of phosphoglycerate mutase and fructose 1,6-bisphosphatase deficiency on free-living and symbiotic Burkholderia phymatum. Microbiology-SGM. 158:1127-1136.
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2012.
The effect of heat stress on sugar beet recombination. Theoretical and Applied Genetics.
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2020.
The effect of heat stress on sugar beet recombination. Theoretical and Applied Genetics. 134:81-93.
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2021.
Effect of clay content and wetting and drying on radiocaesium behaviour in a peat and peaty podzol. The Science of the Total Environment. 368(2-3):795-803.
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2006.
Effect of carbon limitation on photosynthetic electron transport in Nannochloropsis oculata. Journal of Photochemistry and Photobiology, B -Biology.
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2018.
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2016.
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2012.
The effect of 1-methylcyclopropene (1-MCP) on the physical and biochemical characteristics of onion cv. SS1 bulbs during storage. Postharvest Biology and Technology. 44:131-140. Abstract
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2007.
Ectomycorrhizal fungi: exploring the mycelial frontier. FEMS Microbiology Reviews. 31(4):388-406.
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2007.
Ecosystem feedbacks and cascade processes: understanding their role in the responses of Arctic and alpine ecosystems to environmental change. Global Change Biology. 15:1153-1172. Abstract
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2009.
Economic valuation of ecosystem goods and services: a review for decision makers. Journal of Environmental Economics and Policy. 8:359-378.
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2019.
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2013.
The ecological engineering impact of a single tree species on the soil microbial community. Journal of Ecology. 98(1):50-61.
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2010.
Earth's air pressure 2.7 billion years ago constrained to less than half of modern levels. Nature Geoscience. Published online..
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2016.
Earth's air pressure 2.7 billion years ago constrained to less than half of modern levels. Nature Geoscience. 9:448-451.
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2016.
Early-successional vegetation changes after roadside prairie restoration modify soil functioning by changing microbial functional diversity. Soil Biology and Biochemistry. 43:1245-1253.
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2011.
Early-life residential exposure to soil components in rural areas and childhood respiratory health and allergy. Science of the Total Environment. 466-467:338-344.
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2014.
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2013.
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2012.
Early childhood wheezing symptoms in relation to plasma selenium in pregnant mothers and neonates. Clinical and Experimental Allergy. 37:1000-1008.
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2007.
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2007.
e-Social science and evidence-based policy assessment: challenges and solutions. Social Science Computer Review. 27(4):553-568.
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2009.
E-coli O157 on Scottish cattle farms: Evidence of local spread and persistence using repeat cross-sectional data. BMC Veterinary Research. 10
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2014.
The dynamics of Phytophthora infestans populations in the major potato-growing regions of Asia - a review. Plant Pathology. 70:1015-1031.
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2021.
Dynamics of microbial biomass and community composition after short-term water status change in Chinese paddy soils. Environmental Science and Pollution Research. 25:2932-2941.
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2018.
Dynamics of antibiotic resistance and its association with bacterial community in a drinking water treatment plant and the residential area. Environmental Science and Pollution Research. Published online..
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2021.
Dynamic modeling and target loads of sulfur and nitrogen for surface waters in Finland, Norway, Sweden, and the United Kingdom. Environmental Science and Technology. 53:5062-5070.
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2019.
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2009.
Dual effects of plant steroidal alkaloids on Saccharomyces cerevisiae. Antimicrobial Agents and Chemotherapy. 50:2732-2740.
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2006.
DsbA plays a critical and multifaceted role in the production of secreted virulence factors by the phytopathogen, Erwinia carotovora subsp. atroseptica. Journal of Biological Chemistry. 283:23739-23753. Abstract
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2008.
Drought-induced nitrous oxide flux dynamics in an enclosed tropical forest. Global Change Biology. 11:1247-1257. Abstract
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2005.
The drivers of change for the contribution of small farms to regional food security in Europe. Global Food Security. 26:ArticleNo.100395.
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2020.
Draft genome sequence for the tree pathogen Phytophthora plurivora. Genome Biology and Evolution. 10:2432-2442.
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2018.
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2017.
Don't diss integration: A comment on Ricklef's disintegrating communities. American Naturalist.. 174(6):919-927.
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2009.
Domain-decomposition method for parallel lattice Boltzmann simulation of incompressible flow in porous media. Physical Review E. 72:016706-1-016706-11. Abstract
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2005.
Does work-life balance affect pro-environmental behaviour? Evidence for the UK using longitudinal microdata Ecological Economics. 145:170-181.
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2018.
Does the preferential microbial colonisation of ferromagnesian minerals affect mineral weathering in soil? Naturwissenschaften. 95(9):851-858.
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2008.
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2017.
Does nature conservation enhance ecosystem services delivery? Ecosystem Services. 17:152-162.
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2016.
Does mother know best? The preference-performance hypothesis and parent-offspring conflict in aboveground-belowground herbivore life cycles Ecological Entomology. 36:117-124.
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2011.
Does grazing on biosolids-treated pasture pose a pathophysiological risk associated with increased exposure to endocrine disrupting compounds? Journal of Animal Science. 92:3185-3198.
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2014.
Does decadal climate variation influence Wheat and Maize production in the southeast USA? Agricultural Forest Meteorology. 204:1-9.
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2015.
Do marine mammals experience stress related to anthropogenic noise? International Journal of Comparative Psychology. 20:250-273.
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2007.
Do elevated soil concentrations of metals affect the diversity and activity of soil invertebrates in the long-term? Soil Use and Management. 24(1):27-46.
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2008.
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2010.
Do biotic interactions shape both sides of the humped-back model of species richness in plant communities? Ecology Letters. 9(7):767-773.
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2006.
Do bacterial-feeding nematodes stimulate root proliferation through hormonal effects? Soil Biology & Biochemistry. 39:1816-1819. Abstract
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2007.
DNA- and RNA- derived assessments of fungal community composition in soil amended with sewage sludge rich in cadmium, copper and zinc. Soil Biology and Biochemistry. 40(9):2358-2365.
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2008.
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2020.
Diversity of populations of Phytophthora infestans in relation to patterns of potato crop management in Latvia and Lithuania. Plant Pathology. 68:1207-1214.
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2019.
Diversity of Phytophthora infestans from Poland. Plant Pathology. 63:203-211.
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2014.
Diversity of methodologies to experiment Integrated Pest Management in arable cropping systems: analysis and reflections based on a European network. European Journal of Agronomy. 83:86-99.
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2017.
Diversity of methodologies to experiment Integrated Pest Management in arable cropping systems: analysis and reflections based on a European network. European Journal of Agronomy. 83:86-99.
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2017.
Diversity of fungi in hair roots of Ericaceae varies along a vegetation gradient. Molecular Ecology. 16(21):4624-4636.
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2007.
Diversity of carbon use strategies in a kelp forest community: implications for a high CO2 ocean. Global Change Biology. 17:2488-2497.
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2011.
Distributions of carbon and nitrogen isotopes in Scotland's topsoil: a national-scale study. European Journal of Soil Science. 66:1002-1011.
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2015.
Distribution of soil carbon and microbial biomass in arable soils under different tillage regimes. Plant and Soil. 338:17-25.
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2011.
Distinct circular single-stranded DNA viruses exist in different soil types. Applied and Environmental Microbiology. 81:3934-3945.
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2015.
Disparities between plant community responses to nitrogen deposition and critical loads in UK semi-natural habitats. Atmospheric Environment. 239:ArticleNo.117478.
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2020.
Disease transmission in an extreme environment: Nematode parasites infect reindeer during the Arctic winter. International Journal for Parasitology. 42:789-795.
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2012.
The disappearing mammal fauna of northern Australia: context, cause, and response. Conservation Letters. 4:192-201.
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2011.
Directional trends in species composition over time can lead to a widespread overemphasis of year-to-year asynchrony. Journal of Vegetation Science. 31:792-802.
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2020.
Direct targeting and rapid isolation of BAC clones spanning a defined chromosome region. Functional & Integrative Genomics. 5:97-103. Abstract
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2005.
Direct sequencing of Arabidopsis thaliana RNA reveals patterns of cleavage and polyadenylation. Nature Structural and Molecular Biology. 19:845-852.
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2012.
The direct response of the external mycelium of arbuscular mycorrhizal fungi to temperature and the implications for nutrient transfer. Soil Biology and Biochemistry. 78:109-117.
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2014.
Direct grafting of carbon nanotubes with ethylenediamine. Journal of Materials Chemistry. 22:21242-21248.
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2012.
Dihydrocaffeoyl polyamines (kukoamine and allies) in potato (Solanum tuberosum) tubers detected during metabolite profiling. Journal of Agricultural and Food Chemistry. 53:5461-5466. Abstract
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2005.
Digital RGB photography and visible-range spectroscopy for soil composition analysis. Geodrma. 313:265-275.
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2018.
Digital mapping of soil ecosystem services in Scotland using neural networks and relationship modelling. Part 2: Mapping of soil ecosystem services. Soil Use and Management. 35:217-231.
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2019.
Digital mapping of soil ecosystem services in Scotland using neural networks and fuzzy classification. Part 1: Mapping of soil classes. Soil Use and Management. 35:205-2016.
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2019.
Digital mapping of peatlands - A critical review. Earth Science Reviews. 196
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2019.
Digestion and transportation of bovine spongiform encephalopathy-derived prion protein in the sheep intestine. Journal of General Virology. 91:3116-3123.
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2010.
Differentiating outdoor recreation: evidence drawn from national surveys in Scotland. Journal of Policy Research in Tourism, Leisure and Events. 2(1):29-50.
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2010.
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2006.
Differential nucleosome occupancy modulates alternative splicing in Arabidopsis thaliana. New Phytologist. 229:1937-1945.
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2021.
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2010.
Differential expression of microRNAs and potential targets under drought stress in barley. Plant Cell and Environment. 40:11-24.
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2017.
Differential effects of polyphenols on proliferation and apoptosis in human myeloid and lymhoid leukemia cell lines. Anti-Cancer Agents in Medicinal Chemistry. 13:1601-1613.
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2013.
Different arbuscular mycorrhizal fungi cocolonizing on a single plant root system recruit distinct microbiomes. mSystems. 5:ArticleNo.e00929-00.
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2020.
Differences in litter mass change mite assemblage structure on a deciduous forest floor. Ecography. 29(6):811-818.
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2006.
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2017.
Dietary requirements for magnesium but not calcium are likely to be met in Malawi based on national food supply data. International Journal for Vitamin and Nutrition Research. 82:192-199.
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2012.
Dietary mineral supplies in Africa. Physiologia Plantarum. 151:208-229.
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2014.
Diagnostic accuracy of PCR for Jaagsiekte sheep retrovirus using field data from 125 Scottish sheep flocks. Veterinary Journal. 187:104-108.
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2011.
Development of specific PCR primers for identification and detection of Phytophthora capsici Leon. European Journal of Plant Pathology. 112:43-52.
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2005.
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2013.
Development of lesions and tissue distribution of parasite in lambs orally infected with sporulated oocysts of Toxoplasma gondii. Veterinary Parasitology. 179:209-215.
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2011.
Development of EST-derived microsatellite markers for Arabidopsis lyrata subspecies petraea (L.). Molecular Ecology Notes. 7:631-634. Abstract
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2007.
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2005.
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2012.
Development and validation of methodology for estimating potato canopy structure for field crop phenotyping and improved breeding. Frontiers in Plant Science. 12:ArticleNo.612843.
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2021.
Development and validation of gas chromatography and real-time quantitative PCR for the quantification of landscape-scale gene flow from varieties of high erucic acid (HEAR) oilseed rape. Journal of the Science of Food and Agriculture. 88:2253-2264. Abstract
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2008.
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2007.
Development and mapping of DArT markers within the Festuca - Lolium complex. BMC Genomics. 10:-473.
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2009.
Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics. 10:-582.
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2009.
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2008.
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2012.
Developing surface water flood forecasting capabilities in Scotland: an operational pilot for the 2014 Commonwealth Games in Glasgow. Journal of Flood Risk Management. 11:S884-S901.
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2018.
Developing a standard approach for monitoring freshwater pearl mussel (Margaritifera margaritifera) populations in European rivers. Aquatic Conservation: Marine and Freshwater Ecosystems. Published online.
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In Press.
Deterministic processes vary during community assembly for ecologically dissimilar taxa. Nature Communications. 6
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2015.
Determining the effect of drying time on phosphorus release from agricultural soils under climate change scenarios. Journal of Environmental Quality. 46:1131-1136.
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2017.