Publications list
Filters: First Letter Of Last Name is C [Clear All Filters]
Re-establishment of Calluna vulgaris (L.) Hull in an eight-year grazing experiment on upland acid grassland. Journal of Nature Conservation. 21:22-30.
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2013.
Re-mating across years and intralineage polygyny are associated with greater than expected levels of inbreeding in wild red deer. Journal of Evolutionary Biology. 25:2457-2469.
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2012.
Recent developments in effector biology of filamentous plant pathogens. Cellular Microbiology. 12:705-715.
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2010.
Recent history of artificial outcrossing facilitates whole-genome association mapping in elite inbred crop varieties. Proceedings of the National Academy of Sciences, USA. 103:18656-18661. Abstract
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2006.
Recent trends in water quality in an agricultural catchment in Eastern Scotland: elucidating the roles of hydrology and land use. Environmental Science: Processes and Impacts. 16:1659-1675.
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2014.
Recommendations for standardizing nomenclature for dietary (poly)phenol catabolites. American Journal of Clinical Nutrition. 112:1051-1068.
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2020.
Reconstruction of monocotyledonous proto-chromosomes reveals faster evolution in plants than in animals. Proceedings of the National Academy of Sciences, USA. 106:14908-14913.
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2009.
Reconstructive social innovation cycles in women led initiatives in rural areas. Sustainability. 13:ArticleNo.1231.
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2021.
Recovering phosphorus from soil - A root solution? Environmental Science and Technology. 46:1977-1978.
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2012.
Recovery of biochemical functionality in polluted flood-plain soils: The role of microhabitat differentiation through revegetation and rehabilitation of the river dynamics. Soil Biology & Biochemistry. 40:2088-2097. Abstract
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2008.
Recreation of lowland heathland on ex-arable land: assessing the limiting processes on two sites with contrasting soil fertility and pH. Journal of Applied Ecology. 44(3):573-582.
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2007.
Reducing DBPs formation in chlorination of Br-containing Diclofenac via Fe-Cu-MCM-41/O-3 peroxidation: Efficiency, characterization DBPs precursors and mechanism. Journal of the Taiwan Institute of Chemical Engineers. 84:212-221.
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2018.
Reducing fluxes of faecal indicator compliance parameters to bathing waters from diffuse agricultural sources: The Brighouse Bay study, Scotland. Environmental Pollution. 147(1):138-149.
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2007.
Reducing stomatal density in barley improves drought tolerance without impacting on yield. Plant Physiology. 174:776-787.
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2017.
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2020.
Regional trends in Scottish advisory soil acidity and phosphorus results: significance of management history, land use and soil attributes. Soil Use and Management. 32:44-53.
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2016.
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2013.
Regulon studies and in planta role of the BraI/R quorum-sensing system in the plant-beneficial Burkholderia cluster. Applied and Environmental Microbiology. 79:4421-4432.
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2013.
Rejoinder to Comments on Minasny et al., 2017 Soil carbon 4 per mille. Geoderma, 292, 59-86. Geoderma. 309:124-129.
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2018.
Rejoinder to Comments on Minasny et al., 2017 Soil carbon 4 per mille. Geoderma, 292, 59-86. Geoderma. 309:124-129.
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2018.
Relationship between pro-environmental attitudes and behaviour and dietary intake patterns. Sustainable Production and Consumption. 16:216-226.
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2018.
Relationship between volative profile and sensory development of an oat based biscuit. Food Chemistry. 160:72-81.
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2014.
Relationships between native small mammals and native and introduced large herbivores. Austral Ecology. 39:236-243.
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2014.
Relationships between structure and function in streams contrasting in temperature: possible impacts of climate change on running water ecosystems. Freshwater Biology. 54(10):2051-2068.
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2009.
Relationships between understory specialist species and local management practices in coppiced forests - evidence from the Italian Apennines. Forest Ecology and Management. 385:35-45.
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2017.
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2005.
The relative performance of AIC, AIC(C) and BIC in the presence of unobserved heterogeneity. Methods in Ecology and Evolution.
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2016.
A remote sensing-based approach to management zone delineation in small scale farming systems. Agronomy. 10:ArticleNo.1767.
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2020.
Replication and trafficking of a plant virus are coupled at the entrances of plasmodesmata. Journal of Cell Biology. 201:981-995.
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2013.
Reply to comment on: Vegetation burning for game management in the UK uplands is increasing and overlaps spatially with soil carbon and protected areas. Biological Conservation. 195:295-296.
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2016.
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2013.
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2011.
Resistance to powdery mildew in Spanish barley landraces is controlled by different sets of quantitative trait loci. Theoretical and Applied Genetics. 123:1019-1028.
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2011.
The response of process-based agro-ecosystem models to within-field variability in site conditions. Field Crops Research. 228:1-19.
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2018.
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2011.
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2011.
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2015.
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2017.
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2017.
Responses by earthworms to reduced tillage in herbicide tolerant maize and Bt maize cropping systems. Pedobiologia. 51:219-227. Abstract
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2007.
Restoration of upland heath from a graminoid- to a Calluna vulgaris-dominated community provides a carbon benefit. Agriculture, Ecosystems and Environment. 185:133-143.
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2014.
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2016.
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2011.
Returning a lost process by reintroducing a locally extinct digging marsupial. PeerJ. 7:ArticleNo.e662.
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2019.
A review of the role of excess soil moisture conditions in constraining farm practices under Atlantic conditions. Soil Use and Management. 28:580-589.
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2012.
Review on ultrasound assisted persulfate degradation of organic contaminants in wastewater: Influences, mechanisms and prospective. Chemical Engineering Journal. 378:ArticleNo.UNSP122146.
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2019.
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2012.
Rhizosphere-scale quantification of hydraulic and mechanical properties of soil impacted by root and seed exudates. Vadose Zone Journal. 17:ArticleNo.170083..
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2018.
Rigorous 3D change determination in Antarctic Peninsula glaciers from stereo WorldView-2 and archival aerial imagery. Remote Sensing of Environment. 205:18-31.
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2018.
Riparian buffer strips as a multifunctional management tool in agricultural landscapes: introduction. Journal of Environmental Quality. 41:297-303.
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2012.
Riparian field margins: can they enhance the functional structure of ground beetle (Coleoptera: Carabidae) assemblages in intensively managed grassland landscapes? Journal of Applied Ecology. 49:1384-1395.
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2012.
Riparian field margins: their potential to enhance biodiversity in intensively managed grasslands. Insect Conservation and Diversity. 5:86-94.
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2012.
The rise and rise of halloysite. Clay Minerals. 51:303-308.
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2016.
Rising temperatures reduce global wheat production. Nature Climate Change. 5:143-147.
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2015.
Risk assessment of the use of PAS100 green composts in sheep and cattle production in Scotland. Waste Management. 32:117-130.
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2012.
Risk assessments for quality-assured, source-segregated composts and anaerobic digestates for a circular bioeconomy in the UK. Environment International. 127:253-266.
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2019.
Risk estimation and annual fluxes of emerging contaminants from a Scottish priority catchment to the estuary and North Sea. Environmental Geochemistry and Health. 40:1987-2005.
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2018.
Risk perception - Issues for flood management in Europe. Natural Hazards and Earth System Sciences. 12:2299-2309.
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2012.
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2012.
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2008.
RNA sequence analysis of diseased groundnut (Arachis hypogaea) reveals the full genome of groundnut rosette assistor virus (GRAV). Virus Research. 277:ArticleNo.197837.
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2020.
RNA- and DNA-based profiling of soil fungal communities in a native Australian eucalypt forest and adjacent Pinus elliotti plantation. Soil Biology and Biochemistry. 39(12):3108-3114.
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2007.
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2016.
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2011.
The role of catchment characteristics in determining surface water nitrogen in four upland regions in the UK. Hydrology and Earth System Sciences. 11(1):356-371.
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2007.
Role of fungi in the biochemical fate of depleted uranium. Current Biology. 18(9):R375-R377.
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2008.
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2007.
The role of mixotrophic protists in the biological carbon pump. Biogeosciences. 11:995-1005.
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2014.
The role of natural heritage in rural development: an analysis of economic linkages in Scotland. Journal of Rural Studies. 22(4):469-484.
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2006.
The role of nitrogen deposition in widespread plant community change across semi-natural habitats. Ecosystems. 17:864-877.
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2014.
The role of secretion systems and small molecules in soft-rot enterobacteriaceae pathogenicity. Annual Review of Phytopathology. 50:425-449.
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2012.
The role of the Cucumber mosaic virus 2b protein in viral movement and symptom induction. Molecular Plant-Microbe Interactions. 22:642-654. Abstract
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2009.
The role of the potato (Solanum tuberosum L.) CCD8 gene in stolon and tuber development. New Phytologist. 198:1108-1120.
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2013.
Root anatomical phenes predict root penetration ability and biomechanical properties in maize (Zea Mays). Journal of Experimental Botany. 66:3151-3162.
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2015.
Root and foot rot of Lantana caused by Phytophthora cryptogea. Plant Disease. 89:909-909. Abstract
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2005.
Root development impacts on the distribution of phosphatase activity: Improvements in quantification using soil zymography. Soil Biology and Biochemistry. 116:158-166.
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2018.
Root exudation of sugars, amino acids, and organic acids by maize as affected by nitrogen, phosphorus, potassium, and iron deficiency. Journal of Plant Nutrition and Soil Science. 174:3-11.
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2011.
Root hair mutations displace the barley rhizosphere microbiota. Frontiers in Plant Science.. 8:ArticleNo.1094.
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2017.
The rsmS (ybaM) mutation causes bypass suppression of the RsmAB post-transcriptional virulence regulation system in enterobacterial phytopathogens. Scientific Reports. 9:ArticleNo.4525.
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2019.
The SAFE FOODS framework for improved risk analysis of foods. Food Control. 21:1566-1587.
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2010.
Salicylic acid confers resistance to a biotrophic rust pathogen, Puccinia substriata, in pearl millet (Pennisetum glaucum). Molecular Plant Pathology. 10:291-304.
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2009.
Sampling bias misrepresents the biogeographical significance of constitutive mixotrophs across global oceans. Global Ecology and Biogeography. 28:418-428.
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2019.
The Sanger FASTQ file format for sequences with quality scores, and the Solexa/Illumina FASTQ variants. Nucleic Acids Research. 38:1767-1771.
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2010.
Scale-dependent effects of coppicing on the species pool of late successional beech forests in the central Apennines, Italy. Applied Vegetation Science. 19:474-485.
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2016.
A scanner system for high-resolution quantification of variation in root growth dynamics of Brassica rapa genotypes. Journal of Experimental Botany. 65:2039-2048.
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2014.
Scenario analysis for regional decision-making on sustainable multifunctional land uses. Regional Environmental Change. 14:1357-1371.
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2014.
Scotland's hydropower: Current capacity, future potential and the possible impacts of climate change. Renewable and Sustainable Energy Reviews. 52:111-122.
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2015.
Seasonal change is a major driver of soil resistomes at a watershed scale. Isme Communications. 1:ArticleNo.1.
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2021.
Seasonal dynamics of the soil microbial community: assimilation of old and young carbon sources in a long-term field experiment as revealed by natural C-13 abundance. European Journal of Soil Science. 67:79-89.
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2016.
Seasonal patterns of photochemical capacity and spring phenology reveal genetic differentiation among native Scots pine (Pinus sylvetsris L.) populations in Scotland. Forest Ecology and Management. 262:1020-1029.
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2011.
Seasonal variability of dry matter content and its relationship with shoot growth and nonstructural carbohydrates. New Phytologist. 180(1):133-142.
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2008.
Secreted pectin monooxygenases drive plant infection by pathogenic oomycetes. Science. 373:774-779.
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2021.
Securing the future of US agriculture: The case for investing in new entry sustainable farmers. Elementa - Science of the Anthropocene. 7:ArticleNo.17.
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2019.
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2020.
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2016.
Seed dispersal by ungulates as an ecological filter: a trait-based meta-analysis. Oikos. 124:1109-1120.
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2015.
Seed dormancy, nitrogen nutrition and shade acclimation of Impatiens glandulifera: implications for its successful invasion of a deciduous woodland. Plant Ecology and Diversity. 2:145-153.
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2009.
Seeing is not everything: Exploring the landscape experiences of different publics. Landscape and Urban Planning.. 34(4):397-424.
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2009.
Selecting biological indicators for monitoring soils: A framework for balancing scientific and technical opinion to assist policy development. Ecological Indicators. 9(6):1212-1221.
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2009.
Selection footprints in barley breeding lines detected by combining genotyping-by-sequencing with reference genome information. Molecular Breeding. 35:Article11.
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2015.
Selection of feeding sites by horses at pasture: Testing the anti-parasite theory. Applied Animal Behaviour Science. 108(3-4):288-301.
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2007.
Selection of trees for rubbing by red and roe deer in forest plantations. Forest Ecology and Management. 222(1-3):39-45.
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2006.
Selective breeding for susceptibility to myopia reveals a gene-environment interaction. Investigative Ophthalmology and Visual Science. 52:4003-4011.
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2011.
Selective recovery of the virus-vector trichodorid nematode Paratrichodorus anemones from soil samples by immunomagnetic capture. European Journal of Plant Pathology. 120:85-89. Abstract
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2008.
Selective targeting of miRNA-regulated plant development by a viral counter-silencing protein. Plant Journal. 50:240-252. Abstract
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2007.
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2010.
Sequence analysis of the potato aphid Macrosiphum euphorbiae transcriptome identified two new viruses. PLoS ONE. 13:ArticleNo.e0193239.
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2018.
Sequence diversity in the large subunit of RNA polymerase I contributes to Mefenoxam insensitivity in Phytophthora infestans. Molecular Plant Pathology. 15:664-676.
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2014.
Sequencing the potato genome: Outline and first results to come from the elucidation of the sequence of the world's most important food crop. American Journal of Potato Research. 86:417-429.
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2009.
Seroprevalence of respiratory viral pathogens of indigenous calves in Western Kenya. Research in Veterinary Science. 108:120-124.
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2016.
SerpinA3N is a novel hypothalamic gene upregulated by a high-fat diet and leptin in mice. Genes and Nutrition. 13:ArticleNo.28.
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2018.
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2015.
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2019.
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2018.
Sexual selection and senescence: Male size-dimorphic ungulates evolved relatively smaller molars than females. American Naturalist. 170(3):370-380.
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2007.
Shoot zinc (Zn) concentration varies widely within Brassica oleracea L. and is affected by soil Zn and phosphorus (P) levels. Journal of Horticultural Science & Biotechnology. 85:375-380.
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2010.
Shopping versus being in nature? An exploratory study of everyday experiences Frontiers in Psychology.
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2018.
Shopping versus being in nature? An exploratory study of everyday experiences Frontiers in Psychology. 9:Article9.
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2018.
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2013.
Short-term flux chamber experiment to quantify the deposition of gaseous 15N-NH3 to Calluna vulgaris. Agricultural and Forest Meteorology. 148:893-901. Abstract
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2008.
Shrub encroachment can reverse desertification in semi-arid Mediterranean grasslands. Ecology Letters. 12:930-941. Abstract
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2009.
Signaling in induced resistance. Advances in Virus Research. 76:57-121.
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2010.
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2020.
Simple sequence repeat (SSR) markers for genetic mapping of raspberry and blackberry. Journal of the American Society of Horticultural Science. 130:722-728. Abstract
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2005.
Simplifying and improving the extraction of nitrate from freshwater for stable isotope analyses. Journal of Environmental Monitoring. 13:2062-2066.
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2011.
Simulation scenarios of spatio-temporal arrangement of crops at the landscape scale. Environmental Modelling and Software. 25(12):1881-1889.
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2010.
Simultaneous inhibition of CH4 efflux and stimulation of sulphate reduction in peat subject to simulated acid rain. Soil Biology and Biochemistry. 38(12):3506-3510.
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2006.
Simultaneous quantification of soil phosphorus labile pool and desorption kinetics using DGTs and 3D-DIFS. Environmental Science and Technology. 53:6718-6728.
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2019.
A single evolutionary innovation drives the deep evolution of symbiotic N-2-fixation in angiosperms. Nature Communications. 5
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2014.
Single feature polymorphism discovery in the barley transcriptome. Genome Biology. 6:-R54. Abstract
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2005.
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2012.
Site-directed nucleases, a paradigm shift in predictable, knowledge-based plant breeding. Trends in Biotechnology. 31:373-383.
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2013.
Size, structure and nitrogen content of seeds of Fabaceae in relation to nodulation. Botanical Journal of the Linnean Society. 167:251-280.
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2011.
A slow-cooling-rate in situ cell for long-duration studies of mineral precipitation in cold aqueous environments on earth and other planetary bodies. Journal of Applied Crystallography. 51:1197-1210.
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2018.
Social innovation in community energy in Europe: a review of the evidence. Frontiers in Energy Research: Energy Systems and Policy. Published online.. 7:ArticleNo.31.
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2019.
Social tipping dynamics for stabilizing Earth's climate by 2050. Proceedings of the National Academy of Sciences of the United States of America. 117:2354-2365.
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2020.
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2019.
Soil amendment affects Cd uptake by wheat - are we underestimating the risks from chloride inputs? Science of the Total Environment. 554:349-357.
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2016.
Soil and tree biomass carbon sequestration potential of silvopastoral and woodland pasture systems in North East Scotland. Agroforestry Systems. 90:371-383.
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2016.
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2010.
Soil carbon 4 per mille. Geoderma. 292:59-86.
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2017.
Soil carbon 4 per mille. Geoderma. 292:59-86.
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2017.
Soil carbon and nitrogen and barley yield responses to repeated additions of compost and slurry. Journal of Agricultural Science. Published online..
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2016.
Soil carbon and nitrogen and barley yield responses to repeated additions of compost and slurry. Journal of Agricultural Science. 155:144-155.
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2017.
Soil contamination and persistence of pollutants following organophosphate sprays and explosions to control red-billed quelea (Quelea quelea). Pest Management Science. 69:386-396.
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2013.
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2009.
Soil genomics. Nature Reviews in Microbiology.. 7(10):756.
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2009.
Soil information in support of policy making and awareness raising. Current Opinion in Environmental Sustainability. 4:1-7.
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2012.
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2017.
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2017.
Soil management for sustainable agriculture (Editorial). Applied and Environmental Soil Science. 2012
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2012.
Soil Management for Sustainable Agriculture 2013. Editorial. Applied and Environmental Soil Science, 2014, Article No. 536825..
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2014.
Soil microarthropod assemblages under different arable crop rotations in Alberta, Canada. Applied Soil Ecology. 38(1):71-78.
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2008.
Soil microbial activity and community composition as influenced by application of pig biogas slurry in paddy field in southeast China. Paddy and Water Environment. 18:15-25.
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2020.
Soil microbial and faunal community responses to Bt maize and insecticide in two soils. Journal of Environmental Quality. 35:734-741. Abstract
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2006.
Soil microbial and faunal responses to herbicide tolerant maize and herbicide in two soils. Plant and Soil. 308:93-103. Abstract
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2008.
Soil nematode abundance and functional group composition at a global scale. Nature. 572:194-198.
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2019.
Soil nitrogen availability alters rhizodeposition carbon flux into the soil microbial community. Journal of Soils and Sediments. 16:1472-1480.
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2016.
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2016.
Soil organic carbon (SOC) equilibrium and model initialisation methods: an application to the Rothamsted carbon (RothC) model. Environmental Modeling and Assessment. 22:215-239.
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2017.
Soil pH controls nitrification and carbon substrate utilization more than urea or charcoal in some highly acidic soils. Biology and Fertility of Soils. 47:515-522.
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2011.
Soil pore volume and the abundance of soil mites in two contrasting habitats. Soil Biology and Biochemistry. 40(6):1538-1541.
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2008.
Soil quality indices for metal(loid) contamination: an-enzymatic perspective. Land Degradation and Development. 31:2700-2719.
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2020.
Soil risk maps - Interpreting soils data for policy makers, agencies and industry. Soil Use and Management. 36:19-26.
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2020.
Soil spectroscopy: an alternative to wet chemistry for soil monitoring. Advances in Agronomy. 132:139-159.
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2015.
Sorption and desorption of cadmium and zinc in two tropical soils amended with sugarcane-straw-derived biochar. Journal of Soils and Sediments. 16:226-234.
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2016.
Source strengths, transport pathways and delivery mechanisms of nutrients, suspended solids and coliforms within a small agricultural headwater catchment. Science of the Total Environment. 434:123-129.
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2012.
Sources of uncertainty in the quantification of genetically modified oilseed rape contamination in seed lots. Transgenic Research. 16:51-63. Abstract
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2007.
Spatial analysis of ice phenology trends across the Laurentian Great Lakes region during a recent warming period. Limnology and Oceanography. 52:2013-2026.
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2007.
Spatial and seasonal variations in nitrogen leaching and acidity across four acid-impacted regions of the UK. Water, Air and Soil Pollution. 185(1-4):3-19.
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2007.
Spatial and temporal dynamics of stream water particulate and dissolved N, P and C forms along a catchment transect, NE Scotland. Journal of Hydrology. 350(3-4):187-202.
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2008.
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2011.
Spatial and temporal variability of spring barley yield and quality quantified by crop simulation model. Agronomy. 10:ArticleNo.393.
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2020.
Spatial and temporal variation of dissolved organic carbon export from gauged and ungauged watersheds of Dee Valley, Scotland: Effect of land cover and C:N. Water Resources Research article no. W05442.. 43(5)
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2007.
Spatial assessment of land degradation through key ecosystem services: the role of globally available data. Science of the Total Environment. 628-629:539-555.
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2018.
Spatial contributions of diffuse inputs and within-channel processes to the form of stream water phosphorus over storm cycles. Journal of Hydrology. 350(3-4):203-214.
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2008.
Spatial justice on the horizon? A combined theory of change scenario tool to assess place-based interventions European Planning Studies. Published online..
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2021.
Spatial sampling of weather data for regional crop yield simulations. Agricultural and Forest Meteorology. 220:101-115.
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2016.
Special section guest editorial: Recent advances in earth observation technologies for agrometeorology and agroclimatology. Journal of Applied Remote Sensing. 12:ArticleNo.022201.
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2018.
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2010.
Spectroscopic techniques applied to discriminate soils for forensic purposes. Soil Research. 58:151-160.
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2020.
The spliceosome assembly factor GEMIN2 attenuates the effects of temperature on alternative splicing and circadian rhythms. Proceedings of the National Academy of Sciences of the United States of America (PNAS). 112:9382-9387.
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2015.
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2016.
Spray induced gene silencing an innovative strategy for plant trait improvement and disease control. Crop Breeding and Applied Biotechnology.
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2021.
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2010.
Spring phenology shows genetic variation among and within populations in seedlings of Scots pine (Pinus sylvestris L.) in the Scotish Highlands. Plant Ecology and Diversity. 6:523-536.
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2013.
Stability and variability of virulence of Phytophthora infestans assessed in a ring test across European laboratories. Plant Pathology. 60:556-565.
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2011.
Stability of recombinant plant viruses containing genes of unrelated plant viruses. Journal of General Virology. 88:1347-1355. Abstract
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2007.
Stability of resistance to Phytophthora infestans in potato: an international evaluation. Plant Pathology. 54:364-372. Abstract
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2005.
Stability of small ubiquitin-like modifier (SUMO) proteases OVERLY TOLERANT TO SALT1 and-2 modulates salicylic acid signalling and SUMO1/2 conjugation in Arabidopsis thaliana. Journal of Experimental Botany. 67:353-363.
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2016.
Stand biometry and leaf area distribution in an old olive grove at Andria, southern Italy. Annals of Forest Science. 64:491-501. Abstract
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2007.
A standardized methodology to assess the effects of land use change on plant traits, communities and ecosystem functioning in grasslands. Annals of Botany. 99(5):967-985.
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2007.
Stated preferences for conservation policies under uncertainty: insights on individuals’ risk attitudes in the environmental domain. Environmental and Resource Economics. Published online..
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2018.
A statistical analysis of ensembles of crop model responses to climate change factors. Agricultural and Forest Meteorology. 214:483-493.
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2015.
Statistical models to evaluate invertebrate-plant trophic interactions in arable systems. Bulletin of Entomological Research. 97:265-280. Abstract
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2007.
Status and prospects of plant virus control through interference with vector transmission. Annual Review of Phytopathology, 51,177-201.. 51:177-201.
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2013.
The stem rust resistance gene Rpg5 encodes a protein with nucleotide binding site, leucine-rich and protein kinase domains. Proceedings of the National Academy of Sciences, USA. 105:14970-14975. Abstract
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2008.
Stomatal vs. genome size in angiosperms: The somatic tail wagging the genomic dog? Annals of Botany. 105:573-584.
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2010.
Storage nitrogen co-ordinates leaf expansion and photosynthetic capacity in winter oilseed rape. Journal of Experimental Botany. 69:2995-3007.
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2018.
Strategies for monitoring and managing mass populations of toxic cyanobacteria in recreational waters: A multi-interdisciplinary approach. Environmental Health. 8 Supplement 1:-S11.
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2009.