Publications list
Filters: First Letter Of Last Name is C [Clear All Filters]
Determination of zeolite-group mineral compositions by electron probe microanalysis. Mineralogical Magazine. 80:781-807.
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2016.
Determination of soil hydraulic conductivity with the lattice Boltzmann method and soil thin-section technique. Journal of Hydrology. 306:59-70.
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2005.
Determination of N-species in soil extracts using microplate techniques. Talanta. 74:648-654.
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2008.
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2014.
Detection of the nec1 virulence gene and its correlation with pathogenicity in Streptomyces species on potato tubers and in soil using conventional and realtime PCR. Journal of Applied Microbiology. 102:1082-1094. Abstract
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2007.
Detection of lactobacillic acid in low erucic rapeseed oil - A note of caution when quantifying cyclic fatty acid monomers in vegetable oils. Chemistry and Physics of Lipids. 163:698-702.
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2010.
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2020.
Detection and quantification of Phytophthora ramorum, P. kernoviae, P. citricola and P. quercina in symptomatic leaves by multiplex real-time PCR. Molecular Plant Pathology. 7:365-379. Abstract
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2006.
Desynaptic5 carries a spontaneous semi-dominant mutation affecting Disrupted Meiotic cDNA 1 (DMC1) in barley. Journal of Experimental Botany. 70:2683-2698.
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2019.
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2011.
Designing future barley ideotypes using a crop model ensemble. European Journal of Agronomy. 82:144-162.
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2017.
Designing future barley ideotypes using a crop model ensemble. European Journal of Agronomy. 82:144-162.
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2017.
Depletion of organic phosphorus from Oxisols in relation to phosphatase activities in the rhizosphere. European Journal of Soil Science. 57:47-57. Abstract
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2006.
Depicting how Eucalyptus globulus survives drought: involvement of redox and DNA methylation events. Functional Plant Biology. 43:838-850.
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2016.
Denial of long-term issues with agriculture on tropical peatlands will have devastating consequences. Global Change Biology. 23:977-982.
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2017.
Denial of long-term issues with agriculture on tropical peatlands will have devastating consequences. Global Change Biology. 23:977-982.
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2017.
Demand analysis projections for recreational visits to countryside woodlands in Great Britain. Forestry. 79(2):185-200.
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2006.
Delivery of macromolecules to plant parasitic nematodes using a tobacco rattle virus vector. Plant Biotechnology Journal. 5:827-834. Abstract
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2007.
Degradation of yew, ragwort and rhododendron toxins during composting. The Science of the Total Environment. 408(19):3128-4137.
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2010.
Degradation of metalaxyl M in contrasting soils is influenced more by differences in physicochemical characteristics than in microbial community composition after reinoculation of sterilised soils. Soil Biology and Biochemistry.. 42(7):1123-1131.
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2010.
Defoliation patterns and their implications for the management of vegetative tropical pastures to control intake and diet quality by cattle. Grass and Forage Science. 71:424-436.
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2016.
Defining the rhizobium leguminosarum species complex. Genes. 12:ArticleNo.111.
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2021.
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2016.
Defining and delivering resilient ecological networks: nature conservation in England. Journal of Applied Ecology. Published online..
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2018.
Defining and delivering resilient ecological networks: nature conservation in England. Journal of Applied Ecology. 55:2537-2543.
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2018.
Defining and classifying ecosystem services for economic valuation: the case of forest water services. Environmental Science and Policy. 19-20:1-15.
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2012.
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2012.
Decomposition processes under Bt (Bacillus thuringiensis) maize: results of a multi-site experiment. Soil Biology & Biochemistry. 38:195-199. Abstract
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2006.
Decomposition in soil of soluble, insoluble and lignin-rich fractions of plant material from tobacco with genetic modifications to lignin biosynthesis. Soil Biology & Biochemistry. 37:751-760. Abstract
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2005.
Decomposition in soil and chemical characteristics of pollen. European Journal of Soil Science. 59:551-558. Abstract
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2008.
Decentralized treatment and recycling of greywater from a school in rural India. Journal of Water Process Engineering. 30:ArticleNo.101695.
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2020.
The database of the PREDICTS (Projecting Responses of ecological Diversity in Changing Terrestrial Systems). Ecology and Evolution. 7:145-188.
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2017.
The database of the PREDICTS (Projecting Responses of ecological Diversity in Changing Terrestrial Systems). Ecology and Evolution. 7:145-188.
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2017.
Data for life cycle assessment of legume biorefining for alcohol. Data in Brief. 25:ArticleNo.UNSP104242.
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2019.
Darwin - a mission to detect and search for life on extrasolar planets. Astrobiology. 9:1-22.
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2009.
Cytokine expression in the placenta of pregnant cattle after inoculation with Neospora caninum. Veterinary Immunology and Immunopathology. 161:77-89.
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2014.
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2020.
Cucumber mosaic virus 2b protein subcellular targets and interactions: Their significance to RNA silencing suppressor activity. Molecular Plant-Microbe Interactions. 23:294-303.
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2010.
Cucumber mosaic virus 2a polymerase and 3a movement proteins independently affect both virus movement and the timing of symptom development in zucchini squash. Journal of General Virology. 86:1213-1222. Abstract
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2005.
Cryptic photosynthesis - extrasolar planetary oxygen without a surface biological signature. Astrobiology. 9:623-636.
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2009.
Cruciferous vegetables and colo-rectal cancer. Proceedings of the Nutrition Society. 65(1):135-144.
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2006.
Crop yield model validation for Cameroon. Theoretical and Applied Climatology. 96(3-4):275-280.
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2009.
Crop model improvement reduces the uncertainty of the response to temperature of multi-model ensembles. Field Crops Research. 202:5-20.
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2017.
Crop model improvement reduces the uncertainty of the response to temperature of multi-model ensembles. Field Crops Research. 202:5-20.
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2017.
Crop establishment practices are a driver of the plant microbiota in winter oilseed rape (Brassica napus). Frontiers in Microbiology. 8:ArticleNo.1489.
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2017.
A critical review of current methods in earthworm ecology: From individuals to populations (Review). European Journal of Soil Biology. 46:67-73.
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2010.
A critical comparison of technologies for a plant genome sequencing project. GigaScience. 8:ArticleNo.UNSPgiy163.
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2019.
Criteria for a system level evaluation of farm advisory services. Land Use Policy. 61:86-98.
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2017.
Cox regression survival analysis with compositional covariates: Application to modelling mortality risk from 24-h physical activity patterns. Statistical Methods in Medical Research. :ArticleNo.UNSP0962280219864125.
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2019.
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2013.
Could land-based early photosynthesizing ecosystems have bioengineered the planet in mid-Palaeozoic times? Palaeontology. 58:803-837.
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2015.
A cost-effectiveness analysis of water security and water quality: impacts of climate and land-use change on the River Thames system. Philosophical Transactions of the Royal Society, Series A. 371:201204B.
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2013.
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2016.
Corrigendum to impacts of flow regulation on freshwater pearl mussel (Margaritifera margaritifera) habitat in a Scottish montane river [Sci. Total Environ. 432 (2012) 318-328]. Science of The Total Environment. 475:155-155.
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2014.
Converting Australian tropical rainforest to native Araucariaceae plantations alters soil fungal communities. Soil Biology and Biochemistry. 42(1):14-20.
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2010.
Conversion of lowland tropical forests to tree cash crop plantations loses up to one-half of stored soil organic carbon. Proceedings of the National Academy of Sciences of the United States of America (PNAS). 112:9956-9960.
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2015.
Conurbation size drives antibiotic resistance along the river. Science of the Total Environment.
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2022.
Controls on soil solution nitrogen along an altitudinal gradient in the Scottish uplands. Science of the Total Environment. 431:100-108.
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2012.
Control of fruit quality traits in red raspberry, a review from the James Hutton Institute. Aspects of Applied Biology. 119:1-16.
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2013.
Control of bracken (Pteridium aquilinum): meta-analysis of a multi-site study in the UK. Annals of Botany. 101:957-970.
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2008.
The contribution of healthcare smart homes to older people's wellbeing: a new conceptual framework. Wellbeing, Space and Society. 2:ArticleNo.100031.
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2021.
The contribution of farm-scale experiments to the understanding of soil processes and implications for ecosystem services. Guest Editors' introduction. European Journal of Soil Science. 67:359.
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2016.
Contribution of crop model structure, parameters and climate projections to uncertainty in climate change impact assessments. Global Change Biology. 24:1291-1307.
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2018.
The contribution of aeolian material to an Aridisol from southern Jordan as revealed by the mineralogical analysis. Journal of Arid Environments. 72(8):1431-1447.
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2008.
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2019.
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2017.
The context dependence of beneficiary feedback effects in plant facilitations. New Phytologist. 204:386-396.
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2014.
Construction of reference chromosome-scale Pseudomolecules for potato: integrating the potato genome with genetic and physical maps. G3-Genomes Genomes Genetics. 3:2031-2047.
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2013.
Construction of a map-based reference genome sequence for barley, Hordeum vulgare L. Scientific Data. 4:ArticleNo.170044.
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2017.
Construction of a map-based reference genome sequence for barley, Hordeum vulgare L. Scientific Data. 4:ArticleNo.170044.
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2017.
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2014.
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2006.
Considerations for Scottish soil monitoring in the European context. European Journal of Soil Science. 60(5):833-843.
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2009.
Conservation vs divergence in LEAFY and APETALA1 functions between Arabidopsis thaliana and Cardamine hirsuta. New Phytologist. 216:549-561.
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2017.
Consequences of intraspecific variation for the structure and function of ecological communities. II Linking diversity and function. Ecological Modelling. 207(2-4):277-285.
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2007.
Consequences of intraspecific variation for the structure and function of ecological communities. I: Model development and predicted patterns of diversity. Ecological Modelling. 207(2-4):264-276.
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2007.
Consequences of intraspecific variation for the structure and function of ecological communities Part 2: Linking diversity and function. Ecological Modelling. 207:277-285. Abstract
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2007.
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2007.
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2006.
Concentrations and uptake pathways of polychlorinated biphenyls from soil to grass. Ecotoxicology and Environmental Safety. 182:ArticleNo.109428.
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2019.
Concentrations and sources of Cd, Cr, Cu, Fe, Ni, Pb and Zn in soil of the Mitidja plain, Algeria. Toxicological and Environmental Chemistry. 101:59-74.
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2019.
Concentrations and geographic distribution of selected organic pollutants in Scottish surface soils. Environmental Pollution. 182:15-27.
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2013.
Concentration-dependent NH3 deposition processes for stomatal and non-stomatal moorland species. Atmospheric Environment. 41:8990-8994. Abstract
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2007.
Concentration-dependent NH3 deposition processes for mixed moorland semi-natural vegetation. Atmospheric Environment. 41:2049-2060. Abstract
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2007.
Computational models that matter during a global pandemic outbreak: A call to action. Journal of Artificial Societies and Social Simulation. 23:ArticleNo.10.
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2020.
Computation of balanced equivalence relations and their lattice for a coupled cell network. Siam Journal on Applied Dynamical Systems. 12:352-382.
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2013.
Compositional and toxicological analysis of a GM potato line with reduced alpha-solanine content - A 90-day feeding study in the Syrian Golden hamster. Food and Chemical Toxicology. 64:177-185.
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2012.
Compositional analysis of Scottish honeys with antimicrobial activity against antibiotic-resistant bacteria reveals novel antimicrobial components. LWT - Food Science and Technology. 79:52-59.
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2017.
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2017.
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2017.
Complete genome sequence of Burkholderia phymatum STM815T, a broad host range and efficient nitrogen-fixing symbiont of Mimosa species. Standards in Genomic Sciences. 9
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2014.
Competing conservation goals, biodiversity or ecosystem services : element losses and species recruitment in a managed moorland bracken model system. Journal of Environmental Management. 85(4):1034-1047.
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2007.
Comparison of two headspace sampling techniques for the analysis of off-flavour volatiles from oat based products. Food Chemistry. 134:1592-1600.
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2012.
Comparison of transcript profiles in different life stages of the nematode Globodera pallida under different host potato genotypes. Molecular Plant Pathology. 13:1120-1134.
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2012.
A comparison of the isotopic composition of lead in rainwater, surface vegetation and tree bark at the long-term monitoring site, Glensaugh, Scotland in 2007. The Science of the Total Environment. 408(17):3704-3710.
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2010.
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2005.
Comparison of soil carbon stocks in Scottish soils between 1978 and 2009. European Journal of Soil Science. 64:455-465.
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2013.
A comparison of molecular methods for monitoring soil nematodes and their use as biological indicators. European Journal of Soil Science. 46:319-324.
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2010.
Comparison of microbial community assays for the assessment of stream biofilm ecology. Journal of Microbiological Methods. 85:190-198.
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2011.
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2018.
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2014.
A comparison of ecosystem services delivered by 11 long-term monitoring sites in the UK environmental change network. Environmetrics. 22:639-648.
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2011.
Comparison of DNA walking methods for isolation of transgene flanking regions in GM potato. Molecular Biotechnology. 49:19-31.
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2011.
Comparison of different methods of obtaining a resilient organic matter fraction in Alpine soils. Geoderma. 145(3-4):355-369.
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2008.
A comparison of active navigation and passive observation of desktop models of future built environments. Design Studies. 31(5):419-438.
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2010.
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2014.
Comparative visualization of genetic and physical maps with Strudel. Bioinformatics. 27:1307-1308.
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2011.
Comparative virulence of Caribbean, Brazilian and European isolates of Toxoplasma gondii. Parasites and Vectors. 12:ArticleNo.104.
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2019.
Comparative transcriptomics in the Triticeae. BMC Genomics. 10:-285. Abstract
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2009.
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2016.
Comparative transcriptome profiling reveals compatible and incompatible patterns of potato toward phytophthora infestans. G3- Genes Genomes Gemnetics. 10:623-634.
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2020.
Comparative sequence analysis and serological and infectivity studies indicate that cocksfoot mild mosaic virus is a member of the genus Panicovirus. Archives of Virology. 154:1545-1549.
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2009.
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2021.
Comparative genomics of type VI secretion systems in strains of Pantoea ananatis from different environments. BMC Genomics. 15:ArticleNo163.
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2014.
Comparative genome and transcriptome analysis unravels key factors of nitrogen use efficiency in Brassica napus L. Plant Cell and Environment. 43:712-731.
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2020.
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2018.
Comparative genetic mapping reveals synteny and collinearity between the American cranberry and diploid blueberry genomes. Molecular Breeding. 38:ArticleNo.9.
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2018.
A comparative analysis of transcript abundance using SAGE and Affymetrix arrays. Functional & Integrative Genomics. 5:163-174. Abstract
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2005.
Community-driven development for computational biology at Sprints, Hackathons and Codefests. BMC Bioinformatics. Suppl 14
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2014.
Community participation for rural healthcare design: description and critique of a method. Health and Social Care in the Community. 24:175-183.
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2016.
Community energy: entanglements of community, state and private sectors. Geography Compass. 12:ArticleNo.e12378.
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2018.
Common features of environmental and potentially beneficial plant-associated Burkholderia. Microbial Ecology. 63:249-266.
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2012.
Comments on 'Baseline values and change in the soil, and implications for monitoring' by R.M. Lark, P.H. Bellamy and G.J.D. Kirk. European Journal of Soil Science. 60:481-483.
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2009.
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2013.
Comment on "Productivity Is a Poor Predictor of Plant Species Richness". Science. 335:1441.
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2012.
Comment on "Microbially derived inputs of soil organic matter: are current estimates too low?" Environmental Science and Technology. 42(8):3115-3115.
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2008.
Combining genetical genomics and bulked segregant analysis-based differential expression: an approach to gene localization. Theoretical and Applied Genetics. 122:1375-1383.
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2011.
Combining diverse data sources for CEDSS, an agent-based model of domestic energy demand. Structure and Dynamics: eJournal of Anthropological and Related Sciences. 7
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2014.
Combining deliberative and computer-based methods for multi-objective land-use planning. Agricultural Systems. 87(1):18-37.
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2006.
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2015.
Combined drought and heat activates protective responses in Eucalyptus globulus that are not activated when subjected to drought or heat stress alone. Frontiers in Plant Science. 9:ArticleNo.819.
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2018.
Colon-available raspberry polyphenols exhibit anti-cancer effects on in vitro models of colon cancer. Journal of Carcinogenesis. 6:1-13. Abstract
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2007.
Colon-available raspberry extract exhibit anti-cancer effects on in vitro models of colon cancer. Proceedings of the Nutrition Society. 66:67A-67A.
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2007.
Collapse of single stable states via a fractal attraction basin: analysis of a representative metabolic network. Proceedings of the Royal Society of London Series A. 461:2327-2338. Abstract
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2005.
A collaboratively-derived science-policy research agenda. PloS ONE. 7:e31824.
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2012.
Cold-dependent expression and alternative splicing of arabidopsis long non-coding RNAs. Frontiers in Plant Science. 10:ArticleNo.235.
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2019.
Cohort variation in individual body mass dissipates with age in large herbivores. Ecological Monographs. 86:517-543.
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2016.
Cohort variation in individual body mass dissipates with age in large herbivores. Ecological Monographs. 86:517-543.
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2016.
Codeposition of organic carbon and arsenic in Bengal Delta aquifers. Environmental Science & Technology. 40:4928-4935. Abstract
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2006.
Co-ordinated gene expression during phases of dormancy release in raspberry (Rubus idaeus L.) buds.. Journal of Experimental Botany. 58:1035-1045. Abstract
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2007.
Co-occurrence of defensive traits in the potato aphid Macrosiphum euphorbiae. Ecological Entomology. 43:538-542.
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2018.
Co-adaptation of seed dormancy and flowering time in the arable weed Capsella bursa-pastoris (shepherd's purse). Annals of Botany. 109:481-489.
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2012.
Climatic drivers of plant-plant interactions and diversity in alpine communities. Alpine Botany. 121:63-70.
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2011.
Climate variability and maize production in Cameroon: simulating the effects of extreme dry and wet years. Singapore Journal of Tropical Geography. 29:357-370.
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2008.
Climate change, plant diseases and food security: an overview. Plant Pathology. 60:2-14.
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2011.
Climate change, drought risk and land capability for agriculture: implications for land-use in Scotland. Regional Environmental Change. 11:503-518.
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2011.
Climate change impact and adaptation for wheat protein. Global Change Biology. 25:155-173.
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2019.
Climate change effects on physiology and population processes of hosts and vectors that influence the spread of hemipteran-borne plant viruses. Global Change Biology. 15:1884-1894.
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2009.
Climate change cannot be entirely responsible for soil carbon loss observed in England and Wales, 1978-2003. Global Change Biology. 13(12):2605-2609.
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2007.
Climate change adaptation planning in agriculture: processes, experiences and lessons learned from early adapters. Mitigation and Adaptation Strategies for Global Change. 19:411-430.
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2014.
Clay mineral variations in holocene terrestrial sediments from the Indus Basin. Quaternary Research. 77:368-381.
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2012.
Classifying multi-model wheat yield impact response surfaces showing sensitivity to temperature and precipitation change. Agricultural Systems. 159:209-224.
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2018.
Classifying multi-model wheat yield impact response surfaces showing sensitivity to temperature and precipitation change. Agricultural Systems. 159:209-224.
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2018.
Cinnamon shows antidiabetic properties that are species-specific: effects on enzyme activity inhibition and starch digestion. Plant Foods for Human Nutrition. 74:544-552.
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2019.
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2015.
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2014.
A chromosome conformation capture ordered sequence of the barley genome. Nature. 544:427-433.
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2017.
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2015.
Chromatin dynamics during interphase and cell division similarities and differences between model and crop plants. Journal of Experimental Botany, Published online..
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In Press.
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2005.
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2012.
Chemical speciation studies on DU contaminated soils using flow field flow fractionation linked to inductively coupled plasma mass spectrometry (FIFFF-ICP-MS). Journal of Environmental Monitoring. 14:782-790.
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2012.
Characterization of the papilionoid-Burkholderia interaction in the Fynbos biome: the diversity and distribution of beta-rhizobia nodulating Podalyria calyptrata (Fabaceae, Podalyrieae). Systematic and Applied Microbiology. 39:41-48.
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2016.
Characterization of the interactions between Cucumber mosaic virus and Potato virus Y in mixed infections in tomato. Molecular Plant-Microbe Interactions. 23:1514-1524.
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2010.
Characterization of surface water isotope spatial patterns of Scotland. Journal of Geochemical Exploration. 194:71-80.
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2018.
Characterization of Phytophthora infestans populations in northwestern Algeria during 2008-2014. Fungal Biology. 121:467-477.
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2017.
Characterization of Phytophthora infestans populations in Cyprus, the southernmost potato-producing European country. Plant Disease. Published online.
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2021.
Characterization of immune system cell subsets in fixed tissues from alpine chamois (Rupicapra rupicapra). Journal of Comparative Pathology. 155:207-212.
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2016.
Characterization of immune cell infiltration in the placentome of water buffaloes (Bubalus bubalis) infected with Neospora caninum during pregnancy. Journal of Comparative Pathology. 150:463-468.
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2014.
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2014.
Characterisation of Phytophthora inundata according to host range, morphological variation and multigene molecular phylogeny. Phytopathologia Mediterranea. 52:46-65.
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2013.
Characterisation of Phytophthora infestans isolates of potato crops from Spain. Potato Research. 62:453-463.
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2019.
Characterisation of Fusarium sp. responsible for causing dry rot of potato in Great Britain. Plant Pathology. 57:262-271. Abstract
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2008.
Characterisation of barley resistance to rhynchosporium on chromosome 6HS. Theoretical and Applied Genetics. 132:1089-1107.
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2019.
Characterisation of barley landraces from Syria and Jordan for resistance to rhynchosporium and identification of diagnostic markers for Rrs1Rh4. Theoretical and Applied Genetics. 133:1243-1264.
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2020.
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2005.
Chapter three - climate change and defence against pathogens in plants. Advances in Applied Microbiology. 81:89-132.
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2012.
Chapter one - Plant-microbiota interactions as a driver of the mineral turnover in the rhizosphere. Advances in Applied Microbiology. 95:1-67.
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2016.
Changing climate and nutrient transfers: Evidence from high temporal resolution concentration-flow dynamics in headwater catchments. Science of the Total Environment. 548:325-339.
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2016.
Changes in pH at the exterior surface of plankton with ocean acidification. Nature Climate Change. 2:510-513.
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2012.
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2006.
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2007.
Changes in fungal community composition in response to vegetational succession during the natural regeneration of cutover peatlands. Microbial Ecology. 54(3):508-522.
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2007.
Changes in climate variability with reference to land quality and agriculture in Scotland. International Journal of Biometeorology. 59:717-732.
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2015.
Changes in carbon flux and spectral reflectance of Sphagnum mosses as a result of simulated drought. Ecohydrology. 12:ArticleNo.e2123.
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2019.
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2014.
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2017.
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2008.
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2018.
Challenges to enabling and implementing Natural Flood Management in Scotland. Journal of Flood Risk Management. Published online..
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2017.
Challenges to enabling and implementing Natural Flood Management in Scotland. Journal of Flood Risk Management. 11:S1078-S1089.
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2018.
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2018.
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2018.
Cereal landraces for sustainable agriculture. A review (Review). Agronomy for Sustainable Development. 30:237-269.
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2010.
Central metabolism Is tuned to the availability of oxygen in developing melon fruit. Frontiers in Plant Science. 10:ArticleNo.594.
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2019.
CD21 B cell populations are altered following subcutaneous scrapie inoculation in sheep. Veterinary Immunology and Immunopathology. 131:105-109.
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2009.
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2012.
Catchment microbial dynamics: the emergence of a research agenda. Progress in Physical Geography. 31(1):59-76.
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2007.
Caspase-resistant VirD2 protein provides enhanced gene delivery and expression in plants. Plant Cell Reports. 26:1215-1219. Abstract
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2007.
The cascading effects of birch on heather moorland: a test for the top-down control of an ecosystem engineer. Journal of Ecology. 95(3):540-554.
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2007.