Publications list
Filters: First Letter Of Last Name is D [Clear All Filters]
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2017.
Mapping loci that control tuber and foliar symptoms caused by PVY in autotetraploid potato (Solanum tuberosum L.). G3-Genes Genomes Genetics. 7:3587-3595.
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2017.
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2017.
Metrics for evaluating the ecological benefits of decreased nitrogen deposition. Biological Conservation. 212:454-463.
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2017.
Microbial soil community analyses for forensic science: application to a blind test. Forensic Science International. 270:153-158.
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2017.
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2017.
New knowledge networks of small-scale farmers in Europe’s periphery. Land Use Policy. 63:428-439.
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2017.
Non-invasive protocol for kinematic monitoring of root growth under infrared light. Bio-protocol. 7:ArticleNo.e2390.
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2017.
Observation of extensive chromosome axis remodeling during the "diffuse-phase" of meiosis in large genome cereals. Frontiers in Plant Science. 8:ArticleNo.1235.
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2017.
Operationalising ecosystem service assessment in bayesian belief networks: Experiences within the OpenNESS project. Ecosystem Services. 29:452-464.
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2017.
Otolith chemistry reveals seamount fidelity in a deepwater fish. Deep-Sea Research, Part I. 121:183-189.
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2017.
Patchy promiscuity: machine learning applied to predict the host specificity of Salmonella enterica and Escherichia coli. Microbial Genomics, 3, (Open Access).
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2017.
A plant growth-promoting symbiosis between Mycena galopus and Vaccinium corymbosum seedlings. Mycorrhiza. 27:831-839.
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2017.
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2017.
Priorities for research in soil ecology. Pedobiologia. 63:1-7.
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2017.
A randomised controlled trial comparing a dietary antiplatelet, the water-soluble tomato extract Fruitflow, with 75mg aspirin in healthy subjects. European Journal of Clinical Nutritiion. 71:723-730.
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2017.
Reducing stomatal density in barley improves drought tolerance without impacting on yield. Plant Physiology. 174:776-787.
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2017.
Research priorities for harnessing plant microbiomes in sustainable agriculture. PLoS Biology. 15:ArticeleNo.e2001793.
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2017.
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2017.
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2017.
A risk-based approach for developing standards for irrigation with reclaimed water. Water Research. 126:372-384.
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2017.
Scenario planning as communicative action: lessons from participatory exercises conducted for the Scottish livestock industry. Technological Forecasting and Social Change. 114:138-151.
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2017.
The science, policy and practice of nature-based solutions: an interdisciplinary perspective. Science of the Total Environment. 579:1215-1227.
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2017.
Selective autophagy limits Cauliflower mosaic virus infection by NBR1-mediated targeting of viral capsid protein and particles. Proceedings of the National Academy of Sciences (PNAS). 114:E2026-E2035.
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2017.
Soil carbon 4 per mille. Geoderma. 292:59-86.
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2017.
Soil carbon 4 per mille. Geoderma. 292:59-86.
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2017.
Soil carbon and nitrogen and barley yield responses to repeated additions of compost and slurry. Journal of Agricultural Science. 155:144-155.
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2017.
Soil characterisation by bacterial community analysis for forensic applications: a quantitative comparison of environmental technologies. Forensic Science International. 26:21-29.
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2017.
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2017.
Soil organic carbon (SOC) equilibrium and model initialisation methods: an application to the Rothamsted carbon (RothC) model. Environmental Modeling and Assessment. 22:215-239.
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2017.
Stable models for metastable systems? Lessons from sensitivity analysis of a Cellular Automata urban land use model Computers Environment and Urban Systems. 62:113-124.
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2017.
Strain identity of the ectomycorrhizal fungus Laccaria bicolor is more important than richness in regulating plant and fungal performance under nutrient rich conditions. Frontiers in Microbiology. 8:ArticleNo.1874.
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2017.
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2017.
Swimming and twitching motility are essential for attachment and virulence of Pantoea ananatis in onion seedlings. Molecular Plant Pathology. 18:734-745.
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2017.
Temporal fatty acid profiles of human decomposition fluid in soil. Organic Geochemistry. 111:26-33.
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2017.
Testing scenarios to achieve workplace sustainability goals using backcasting nad agent-based modeling. Environment and Behavior. 49:1007-1037.
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2017.
Testing the utility of structure-from-motion photogrammetry reconstructions using small unmanned aerial vehicles and ground photography to estimate the extent of upland soil erosion. Earth Surface Processes and Landforms. Published online..
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2017.
Testing the utility of structure-from-motion photogrammetry reconstructions using small unmanned aerial vehicles and ground photography to estimate the extent of upland soil erosion. Earth Surface Processes and Landforms. 42:1860-1871.
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2017.
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2017.
Transformation in a changing climate: a research agenda. Climate and Development. Published online..
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2017.
Transformation in a changing climate: a research agenda. Climate and Development. Published online..
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2017.
Trees, soils, and warthogs - distribution of services and disservices from reforestation areas in southern Ethiopia. Forest Policy and Economics. 84:112-119.
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2017.
The uncertainty of crop yield projections is reduced by improved temperature response functions. Nature Plants. 3:ArticleNo.17102.
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2017.
The uncertainty of crop yield projections is reduced by improved temperature response functions. Nature Plants. 3:ArticleNo.17102.
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2017.
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2017.
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2017.
WiseEye: Next generation expandable and programmable camera trap platform for wildlife research. PLoS OBE. 12:e0169758.
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2017.
The 2015 Bioinformatics Open Source Conference (BOSC 2015). PLoS Computational Biology. 12:e1004691.
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2016.
3D deformation field in growing plant roots reveals both mechanical and biological responses to axial mechanical forces. Journal of Experimental Botany. 67:5605-5614.
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2016.
Adaptation of water resources systems to changing society and environment: a statement by the International Association of Hydrological Sciences. Hydrological Sciences Journal. 61:2803-2817.
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2016.
Allelic diversity of S-RNase alleles in diploid potato species. Theoretical and Applied Genetics. 129:1985-2001.
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2016.
Analysis of root growth from a phenotyping data set using a density-based model. Journal of Experimental Botany. 67:1045-1058.
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2016.
Analysis of root growth from a phenotyping data set using a density-based model. Journal of Experimental Botany.. 67:1045-1058.
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2016.
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2016.
Arbuscular mycorrhizal hyphae promote priming of native soil organic matter mineralisation. Plant and Soil. Published online..
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2016.
Arbuscular mycorrhizal hyphae promote priming of native soil organic matter mineralisation. Plant and Soil. 408:243-254.
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2016.
Barley genotype influences stabilization of rhizodeposition-derived C and soil organic matter mineralization. Soil Biology and Biochemistry. 95:60-69.
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2016.
Changing climate and nutrient transfers: Evidence from high temporal resolution concentration-flow dynamics in headwater catchments. Science of the Total Environment. 548:325-339.
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2016.
Clay mineral source tracing and characterisation of Burdekin River (NE Australia) and flood plume fine sediment. Journal of Soils and Sediments. 16:687-706.
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2016.
Contrasting effects of summer and winter warming on body mass explain population dynamics in a food-limited Arctic herbivore. Global Change Biology. Published online..
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2016.
The contribution of farm-scale experiments to the understanding of soil processes and implications for ecosystem services. Guest Editors' introduction. European Journal of Soil Science. 67:359.
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2016.
Correlations among the mineralogical and physical properties of hallyosite nanotubes (HNTs). Clay Minerals. 51:325-350.
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2016.
Cross tolerance to biotic and abiotic stresses in plants: a focus on resistance to aphid infestation. Journal of Experimental Biology. 67:2025-2037.
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2016.
Determination of zeolite-group mineral compositions by electron probe microanalysis. Mineralogical Magazine. 80:781-807.
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2016.
Differences in virulence between bovine-derived clinical isolates of pasteurella multocida serotype A from the UK and the USA in a model of bovine pneumonic pasteurellosis. Journal of Comparative Pathology. 155:62-71.
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2016.
Does nature conservation enhance ecosystem services delivery? Ecosystem Services. 17:152-162.
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2016.
Effect of diesel contamination on the physico-chemical characteristics of soil and growth of vetiver grass. Soil and Environment. 35:91-98.
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2016.
Effects of landscape configuration on mapping ecosystem service capacity: a review of evidence and a case study in Scotland. Landscape Ecology. 31:1457-1479.
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2016.
Effects of rooting media on root growth and morphology of Brassica rapa seedlings. South African Journal of Plant and Soil. Published online.
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2016.
Effects of rooting media on root growth and morphology of Brassica rapa seedlings. South African Journal of Plant and Soil. 33:219-227.
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2016.
Endemic Mimosa species from Mexico prefer alphaproteobacterial rhizobial symbionts. New Phytologist. 209:319-333.
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2016.
Environmental and economic benefits of variable rate nitrogen fertilization in a nitrate vulnerable zone. Science of the Total Environment. 545:227-235.
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2016.
Evaluating the precision of eight spatial sampling schemes in estimating regional means of simulated yield for two crops. Environmental Modelling and Software. 80:100-112.
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2016.
Evaluation of spot and passive sampling for monitoring, flux estimation and risk assessment of pesticides within the constraints of a typical regulatory monitoring scheme. Science of the Total Environment. 569-570:1369-1379.
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2016.
Exome sequencing of geographically diverse barley landraces and wild relatives gives insights into environmental adaptation. Nature Genetics. 49:1024-1030.
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2016.
FALDO: a semantic standard for describing the location of nucleotide and protein feature annotation. Journal of Biomedical Semantics. 7
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2016.
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2016.
Genomic analysis of 6,000-year-old cultivated grain illuminates the domestication history of barley. Nature Genetics. 48:1089-1093.
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2016.
Greenspace matters: exploring links between greenspace, gender and well-being with conservation volunteers. Landscape Research. 41:641-651.
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2016.
High-throughput metabolic screening of microalgae genetic variation in response to nutrient limitation. Metabolomics. 12:ArticleNo.9.
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2016.
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2016.
A holistic approach to understanding the desorption of phosphorus in soils. Environmental Science and Technology. 50:3371-3381.
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2016.
A homolog of Blade-On-Petiole 1 and 2 (BOP1/2) controls internode length and homeotic changes of the barley inflorescence. Plant Physiology. 171:1113-1127.
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2016.
Horizontal gene transfer from bacteria has enabled the plant-parasitic nematode Globodera pallida to feed on plant-derived sucrose. Molecular Biology and Evolution. 33:1571-1579.
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2016.
Identification and characterization of parasitism genes from the pinewood nematode Bursaphelenchus xylophilus reveals a multilayered detoxification strategy. Molecular Plant Pathology. 17:286-295.
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2016.
The impact of flood action groups on the uptake of flood management measures. Climatic Change. 138:471-489.
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2016.
Impact of light-exposure on the metabolite balance of transgenic potato tubers with modified glycoalkaloid biosynthesis. Food Chemistry. 200:263-273.
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2016.
Impact of management on avian communities in the Scottish highlands. PLoS ONE. 11:e0155473.
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2016.
Impact of spatial soil and climate input data aggregation on regional yield simulations. PLoS ONE. 11:e0151782.
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2016.
Impact of warming on CO2 emissions from streams countered by aquatic photosynthesis. Nature Geoscience. 9:758-761.
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2016.
The INDETERMINATE DOMAIN protein BROAD LEAF1 limits barley leaf width by restricting lateral proliferation. Current Biology. 26:903-909.
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2016.
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2016.
The influence of weather conditions during gestation on life histories in a wild Arctic ungulate. Proceedings of the Royal Society, B. Published online..
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2016.
The influence of weather conditions during gestation on life histories in a wild Arctic ungulate. Proceedings of the Royal Society, B.. 283:ArticleNo.20161760.
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2016.
Inhibition of cathepsin B by caspase-3 inhibitors blocks programmed cell death in Arabidopsis. Cell Death and Differentiation. 23:1493-1501.
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2016.
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2016.
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2016.
Lack of functional redundancy in the relationship between microbial diversity and ecosystem functioning. Journal of Ecology. 104:936-946.
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2016.
Measurement and analysis of household carbon: the case of a UK city. Applied Energy. 164:871-881.
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2016.
Mechanisms of early microbial establishment on growing root surfaces. Vadose Zone Journal. 15
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2016.
Mechanistic interpretation of the varying selectivity of Cesium-137 and potassium uptake by radish (Raphanus sativus L.) under field conditions near Chernobyl. Journal of Environmental Radioactivity. 152:85-91.
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2016.
Microbial diversity drives multifunctionality in terrestrial ecosystems. Nature Communications. 7
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2016.
The mitochondrial genome of Globodera ellingtonae is composed of two circles with segregated gene content and differential copy numbers. BMC Genomics. 17:ArticleNo.706..
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2016.
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2016.
Modelling the associations between fat-free mass, resting metabolic rate and energy intake in the context of total energy balance. International Journal of Obesity. 40:312-318.
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2016.
Morphological responses of wheat (Triticum aestivum L.) roots to phosphorus supply in two contrasting soils. Journal of Agricultural Science. 154:98-108.
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2016.
Multi-wheat-model ensemble responses to interannual climate variability. Environmental Modelling and Software. 81:86-101.
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2016.
Networking of integrated pest management: a powerful approach to address common challenges in agriculture. Crop Protection. 89:139-151.
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2016.
No evidence for extensive horizontal gene transfer in the genome of the tardigrade Hypsibius dujardini. Proceedings of the National Academy of Sciences of the United States of America. 1135053
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2016.
Nutritional and phytochemical content of high-protein crops. Journal of Agricultural and Food Chemistry. 64:7800-7811.
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2016.
Organic matter chemistry controls greenhouse gas emissions from permafrost peatlands. Soil Biology and Biochemistry. 98:42-53.
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2016.
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2016.
Plant-microbe interactions: manipulating signals to enhance agricultural sustainability and environmental security. Plant Growth Regulation. 80:1-3.
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2016.
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2016.
Product stability and sequestration mechanisms in Solanum tuberosum engineered to biosynthesize high value ketocarotenoids. Plant Biotechnology Journal. 14:140-152.
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2016.
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2016.
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2016.
Reply to comment on: Vegetation burning for game management in the UK uplands is increasing and overlaps spatially with soil carbon and protected areas. Biological Conservation. 195:295-296.
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2016.
Response of lightning NOx emissions and ozone production to climate change: Insights from the Atmospheric Chemistry and Climate Model Intercomparison Project. Geophysical Research Letters. 43:5492-5500.
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2016.
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2016.
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2016.
Rhizobium altiplani sp. nov. isolated from effective nodules on Mimosa pudica growing in untypically alkaline soil in Central Brazil. International Journal of Systematic and Evolutionary Microbiology. 66:1-7.
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2016.
Role of lipopolysaccharide and biofilm formation during endophytic colonization of rice (Oryza sativa L.) and nodulation of Sesbania cannabina by Rhizodium sp. IRBG74. Journal of Experimental Botany. 67:5869-5884.
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2016.
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2016.
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2016.
Soil amendment affects Cd uptake by wheat - are we underestimating the risks from chloride inputs? Science of the Total Environment. 554:349-357.
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2016.
Soil carbon and nitrogen and barley yield responses to repeated additions of compost and slurry. Journal of Agricultural Science. Published online..
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2016.
Soil characterisation by bacterial community analysis for forensic applications: a quantitative comparison of environmental technologies. Forensic Science International. 26:21-29.
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2016.
Tackling wicked environmental problems: The discourse and its influence on practice in Scotland. Landscape and Urban Planning. Published online..
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2016.
Tackling wicked environmental problems: The discourse and its influence on practice in Scotland. Landscape and Urban Planning. 154:44-56.
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2016.
Temperature effects on fish production across a natural thermal gradient. Global Change Biology. 22:3206-3220.
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2016.
Terrestrial nitrogen cycling in earth system models revisited. New Phytologist. 210:1165-1168.
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2016.
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2016.
The unfolded protein response and programmed cell death are induced by expression of garlic virus X p11 in Nicotiana benthamiana. Journal of General Virology. 97:1462-1468.
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2016.
Unpacking the people - biodiversity paradox: a conceptual framework. Bioscience. 66:576-583.
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2016.
Using combined diagnostic test results to hindcast trends of infection from cross-sectional data. PLoS Computational Biology. 12:ArticleNo.e1004901.
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2016.
Using combined diagnostic test results to hindcast trends of infection from cross-sectional data. PLOS Computational Biology.. 12
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2016.
Using nematode communities to test a European scale soil biological monitoring programme for policy development. Applied Soil Ecology. 97:78-85.
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2016.
Addressing "nature-deficit disorder": a mixed methods pilot study of young adults attending a wilderness camp. Evidence based Complimentary and Alternative Medicine. Article No. 651827
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2015.
An agent-based model for simulating environmental behavior in an educational organization. Neural Processing Letters. 42:89-118.
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2015.
The AKIS concept and its relevance in selected EU member states. Outlook on Agriculture.
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2015.
Assessing biogas digestate, pot ale, wood ash and rockdust as soil amendments: effects on soil chemistry and microbial community composition. Acta Agriculturae Scandinavica, Section B: Soil and Plant Science.
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2015.
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2015.
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2015.
Automated estimation of leaf area development in sweet pepper plants from image analysis. Functional Plant Biology. 42:486-492.
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2015.
Barley: a translational model for adaptation to climate change. New Phytologist. 206:913-931.
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2015.
Burkholderia dipogonis sp. Nov., isolated from root nodules of Dipogon lignosus in New Zealand and Western Australia. International Journal of Systematic and Evolutionary Microbiology. 65:4716-4723.
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2015.
Caesium inhibits the colonization of Medicago truncatula by arbuscular mycorrhizal fungi. Journal of Environmental Radioactivity. 141:57-61.
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2015.
Can fuzzy cognitive mapping help in agricultural policy design and communication? Land Use Policy. 45:64-75.
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2015.
Can policy be risk-based? The cultural theory of risk and the case of livestock disease containment Sociologia Ruralis. 55:379-399.
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2015.
The cascading impacts of livestock grazing in upland ecosystems: a 10 year experiment. Ecosphere. 6:ArticleNo.42..
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2015.
Challenges and opportunities for quantifying roots and rhizosphere interactions through imaging and image analysis. Plant, Cell and Environment. 38:1213-1232.
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2015.
Determination of the optimal soil sample size to accurately characterise nematode communities in soil. Soil Biology and Biochemistry. 80:89-91.
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2015.
Discursive claims to knowledge: The challenge of delivering public policy objectives through new environmental governance arrangements. Journal of Rural Studies. 37:1-9.
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2015.
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2015.
Distinct circular single-stranded DNA viruses exist in different soil types. Applied and Environmental Microbiology. 81:3934-3945.
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2015.
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2015.
Eight principles of integrated pest management. Agronomy for Sustainable Development. 35:1199-1215.
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2015.
Evolution of the seed dispersal system in barley. Cell. 162:527-539.
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2015.
Five reasons to consider Phytophthora infestans a reemerging pathogen. Phytopathology. 105:966-981.
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2015.
Function of glutathione peroxidases in legume root nodules. Journal of Experimental Botany. 66:2979-2990.
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2015.
Genetic linkage mapping of economically important traits in cultivated tetraploid potato (Solanum tuberosum L.). G3-Genes Genomes Genetics. 5:2357-2364.
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2015.
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2015.
Historical influences on the current provision of multiple ecosystem services. Global Environmental Change - Human and Policy Dimensions. 31:307-317.
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2015.
How well can we model stream phosphorus concentrations in agricultural catchments? Environmental Modelling and Software. 64:31-46.
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2015.
Identification of a fluorometabolite from Streptomyces sp MA37: (2R3S4S)-5-fluoro-2,3,4-trihydroxypentanoic acid. Chemical Science. 6:1414-1419.
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2015.
Impacts on the metabolome of down-regulating polyphenol oxidase in potato tubers. Transgenic Research. 24:447-461.
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2015.
Improving intercropping: a synthesis of research in agronomy, plant physiology and ecology. New Phytologist. 206:107-117.
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2015.
Improving value transfer through socio-economic adjustments in a multicountry choice experiment of water conservation alternatives. Australian Journal of Agricultural and Resource Economics. 59:458-478.
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2015.
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2015.
Integrated cost-effectiveness analysis of agri-environmental measures for water quality. Journal of Environmental Management. 161:163-172.
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2015.
An invasive mammal (the gray squirrel, Sciurus carolinensis) commonly hosts diverse and atypical genotypes of the zoonotic pathogen Borrelia burgdorferi Sensu Lato. Applied and Environmental Microbiology. 81:4236-4245.
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2015.
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2015.
Late production of CXCL8 in ruminant oro-nasal turbinate cells in response to Chlamydia abortus infection. Veterinary Immunology and Immunopathology. 168:97-102.
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2015.
Metabolic responses of eukaryotic microalgae to environmental stress limit the ability of FT-IR spectroscopy for species identification. Algal Research- Biomass Biofuels and Bioproducts. 11:148-155.
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2015.
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2015.
Modelling larval movement data from individual bioassays. Biometrical Journal. 57:485-501.
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2015.
Modelling the emergent dynamics and major metabolites of the human colonic microbiota. Environmental Microbiology. 17:1615-1630.
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2015.
Modifying glycoalkaloid content in transgenic potato - Metabolome impacts. Food Chemistry. 187:437-443.
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2015.
More cash and jobs per illegal drop? The legal and illegal water footprint of the Western Mancha Aquifer (Spain) Environmental Science and Policy. 51:256-266.
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2015.
The MORPH-R web server and software tool for predicting missing genes in biological pathways. Physiologia Plantarum. 155:12-20.
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2015.
Nematode communities response to long-term grazing disturbance on Tibetan plateau. European Journal of Soil Biology. 69:24-32.
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2015.
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2015.
Optimization of in vitro inhibition of HT-29 colon cancer cell cultures by Solanum tuberosum L. extracts. Food and Function. 6:72-83.
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2015.
Participation-prescription tension in natural resource management: the case of diffuse pollution in Scottish water management. Environmental Policy and Governance. 25:111-124.
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2015.
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2015.
Participatory scenario-planning in place-based social-ecological research: insights and experiences from 23 case studies. Ecology and Society. 20:ArticleNo.34.
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2015.
Phytophthora infestans RXLR effector AVR1 interacts with exocyst component Sec5 to manipulate plant immunity. Plant Physiology. 169:1975-1990.
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2015.
A pragmatic methodology for horizon scanning of water quality linked to future climate and land use scenarios. Land Use Policy. 44:131-144.
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2015.
Preceding crop and weed management history affect denitrification and denitrifier community structure throughout the development of durum wheat. Agriculture, Ecosystems and Environment. 212:49-63.
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2015.
Predicting Scottish topsoil organic matter content from colour and environmental factors. European Journal of Soil Science. 66:112-120.
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2015.
Probing soil physical and biological resilience data from a broad sampling of arable farms in Scotland. Soil Use and Management. 31:491-503.
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2015.
Protracted treatment with corticosterone reduces breeding success in a long-lived bird. General and Comparative Endocrinology. 210:38-45.
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2015.
Putting transdisciplinarity into practice: a mixed mode procedure for stakeholder participation in natural resource management. Journal of Environmental Planning and Management. 58:1827-1852.
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2015.
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2015.