Publications list
Filters: First Letter Of Last Name is D [Clear All Filters]
Characterisation and time course of pulmonary lesions in calves after intratracheal infection with Pasteurella multocida A:3. Journal of Comparative Pathology. 142:157-169.
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2010.
Differences in virulence between bovine-derived clinical isolates of pasteurella multocida serotype A from the UK and the USA in a model of bovine pneumonic pasteurellosis. Journal of Comparative Pathology. 155:62-71.
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2016.
Digestion and transportation of bovine spongiform encephalopathy-derived prion protein in the sheep intestine. Journal of General Virology. 91:3116-3123.
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2010.
Polyphenols are responsible for the pro-apoptotic properties of pemegranate juice on leukemia cell lines. Food Science & Nutrition. 1:196-208.
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2013.
Waste recovered by-products can increase growth of grass-clover mixtures in low fertility soils and alter botanical and mineral nutrient composition. Annals of Applied Biology. 166:105-117.
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2015.
Soil amendment affects Cd uptake by wheat - are we underestimating the risks from chloride inputs? Science of the Total Environment. 554:349-357.
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2016.
Revisiting herbage sample collection and preparation procedures to minimise risks of trace element contamination. European Journal of Agronomy. 43:33-39.
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2012.
Tibet is one of the centers of domestication of cultivated barley. Proceedings of the National Academy of Sciences, USA. 109:16969-16973.
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2012.
Quantifying preferences for the natural world using monetary and non-monetary assessments of value. Conservation Biology. 28:404-413.
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2014.
Historical influences on the current provision of multiple ecosystem services. Global Environmental Change - Human and Policy Dimensions. 31:307-317.
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2015.
What personal and environmental factors determine frequency of urban greenspace use? International Journal of Environmental Research and Public Health. 11:7977-7992.
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2014.
RNAi-suppression of barley caffeic acid O-methyltransferase modifies lignin despite redundancy in the gene family. Plant Biotechnology Journal.. 17:594-607.
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2019.
Horizontal gene transfer from bacteria has enabled the plant-parasitic nematode Globodera pallida to feed on plant-derived sucrose. Molecular Biology and Evolution. 33:1571-1579.
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2016.
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2017.
Agenda-setting and power in collaborative natural resource management. Environmental Conservation. 41:311-320.
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2014.
Improved real-time PCR estimation of gene copy number in soil extracts using an artificial reference. Journal of Microbiological Methods. 91:38-44.
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2012.
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2014.
Alternative splicing of circadian clock genes correlates with temperature in field-grown sugarcane. Frontiers in Plant Science. 10:ArticleNo.1614..
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2019.
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2018.
A comparison of mainstream genotyping platforms for the evaluation and use of barley genetic resources. Frontiers in Plant Science. 10:ArticleNo.544.
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2019.
Genome editing of potato using CRISPR technologies: current development and future prospective. Plant Cell, Tissue and Organ Culture. 139:403-416.
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2019.
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2007.
Effects of host social hierarchy on disease persistence. Journal of Theoretical Biology. 253:424-433. Abstract
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2008.
Use of host population reduction to control wildlife infection: rabbits and paratuberculosis. Epidemiology and Infection. 137:131-138.
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2009.
Collaboration in natural resource governance: Reconciling stakeholder expectations in deer management in Scotland. Journal of Environmental Management.. 112:160-169.
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2012.
Long-term approaches to native woodland restoration: Palaeoecological and stakeholder perspectives on Atlantic forests of Northern Europe. Forest Ecology and Management. 261:751-763.
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2011.
The role of 'omics' technologies in food safety assessment. Food Control. 21:1601-1610.
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2010.
Palaeo-environments and human experience. Archaeological Dialogues. 19:51-54.
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2012.
Farmers' preferences for new environmental policy instruments: determining the acceptability of cross compliance for biodiversity benefits. Journal of Agricultural Economics. 57(3):393-414.
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2006.
Advances in functional genomics and genetic modification of potato (Review). Potato Research. 51:283-299. Abstract
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2008.
Use of multicriteria decision analysis to address conservation conflicts. Conservation Biology. 27:936-944.
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2013.
Modulation of fructokinase activity of potato (Solanum tuberosum) results in substantial shifts in tuber metabolism. Plant and Cell Physiology. 46:1103-1115. Abstract
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2005.
Metabolome variability in crop plant species - when, where, how much and so what? Regulatory Toxicology and Pharmacology. 58:S54-S61.
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2010.
Genotypic variation in a foundation tree (Populus tremula L.) explains community structure of associated epiphytes. Biology Letters. 10:ArticleNo.20140190.
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2014.
GM organisms and the EU regulatory environment.. Proceedings of the Nutrition Society. 64:481-486.
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2005.
Exploring environmental perspectives in arable agriculture: a Q methodology study in East Anglia, UK. Ecological Economics. 61(2-3):323-333.
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2007.
Trajectories toward maximum power and inequality in resource distribution networks. PLoS ONE. 15:ArticleNo.e0-229956.
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2020.
Measuring heterogeneity in soil networks: a network analysis and simulation-based approach. Ecological Modelling. 439:ArticleNo.109308.
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2021.
Contrasting nutrient-disease relationships: Potassium gradients in barley leaves have opposite effects on two fungal pathogens with different sensitivities to jasmonic acid. Plant Cell and Environment. 41:2357-2372.
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2018.
Arbuscular mycorrhizal fungal communities in plant roots are not random assemblages. FEMS Microbiology Ecology. 78:103-115.
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2011.
Barley: a translational model for adaptation to climate change. New Phytologist. 206:913-931.
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2015.
Linking biosensor responses to Cd, Cu and Zn partitioning in soils. Environmental Pollution. 142(3):493-500.
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2006.
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2013.
Influence of hydrology and seasonality on long-term DOC exports from three contrasting upland catchments. Biogeochemistry. 90(1):93-113.
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2008.
Does biotechnology have a role in the promotion of underutilised crops? Food Policy. 34:319-328.
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2009.
Seasonal controls on DOC dynamics in nested upland catchments in NE Scotland. Hydrological Processes. 25:1647-1658.
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2011.
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2017.
Measurement of soil characteristics for forensic applications. Surface and Interface Analysis. 42(5):363-377.
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2010.
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2011.
The biogeochemical reactivity of suspended particulate matter at nested sites in the Dee basin, NE Scotland. Science of the Total Environment. 434:159-170.
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2012.
Integrative management to mitigate diffuse pollution in multi-functional landscapes. Current Opinions in Environmental Sustainability. 2(5-6):375-382.
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2010.
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2021.
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2008.
Open-system chemical behavior in deep Wilcox Group mudstones, Texas Gulf. Marine and Petroleum Geology.. 27(9):1804-1818.
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2010.
Discussion in response to Knut Bjorlykke regarding JMPG_1376 "Open-System Chemical Behavior In Deep Wilcox Group Mudstones, Texas Gulf Coast, USA". Marine and Petroleum Geology. 28:1383-1384.
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2011.
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2010.
Insights into the evolution of multicellularity from the sea lettuce genome. Current Biology. 28:2921-2933.
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2018.
"Health in" and "Health of" social-ecological systems: a practical framework for the management of healthy and resilient agricultural and natural ecosystems. Frontiers in Public Health. 8:ArticleNo.616328.
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2021.
Genetic dissection of quantitative and qualitative traits using a minimum set of barley recombinant chromosome substitution lines. BMC Plant Biology. 18:ArticleNo.340.
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2018.
Morphological and genetic characterisation of the root system architecture of selected barley recombinant chromosome substitution lines using an integrated phenotyping approach. Journal of Theoretical Biology. 447:84-97.
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2018.
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2014.
Genome sequence of Pantoea ananatis LMG20103, the causative agent of Eucalyptus blight and dieback. Journal of Bacteriology. 192:2936-2937.
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2010.
Mesorhizobium carmichaelinearum sp. nov., isolated from Carmichaelineae spp. root nodules. International Journal of Systematic and Evolutionary Microbiology. 69:146-152.
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2019.
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2016.
Analyzing lateral root development: how to move forward. The Plant Cell. 24:15-20.
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2012.
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2019.
Analysis of time series data on agroecosystem vegetation using predictive clustering trees. Ecological Modelling. 222:2524-2529.
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2011.
Relations between the oilseed rape volunteer seedbank, and soil factors, weed functional groups and geographical location in the UK. Ecological Modelling. 212:138-146. Abstract
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2008.
Potential of multi-objective models for risk-based mapping of the resilience characteristics of soils: demonstration at a national level. Soil Use and Management. 25:66-77.
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2009.
Potential of multi-objective models for risk-based mapping of the resilience characteristics of soils: demonstration at a national level. Soil Use and Management. 25(1):66-77.
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2008.
A superfamily of actin-binding proteins at the actin-membrane nexus of higher plants. Current Biology. 22:1595-1600.
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2012.
Characterisation of flow paths and saturated conductivity in a soil block in relation to chloride breakthrough. Journal of Hydrology. 348(3-4):431-441.
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2008.
Characterisation of flow paths and saturated conductivity in a soil block in relation to chloride breakthrough. Journal of Hydrology. 348:431-441. Abstract
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2008.
Data and models for exploring sustainability of human well-being in global environmental change. European Physical Journal Special Topics.. 214:519-545.
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2012.
Defence response of Sitka spruce before and after inoculation with Heterobasidion annosum: 1H NMR fingerprinting of bark and sapwood metabolites. Analytical and Bioanalytical Chemistry. 402:3333-3344.
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2012.
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2010.
Inter-population differences in the tolerance of a marsupial folivore to plant secondary metabolites. Oecologia.. 161(3):539-548.
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2009.
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2009.
A simple integrative assay to quantify nutritional quality for browsing herbivores. Oecologia. 156(1):107-116.
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2008.
The presence of sheep leads to increases in plant diversity and reductions in the impact of deer on heather. Journal of Applied Ecology. 48:1269-1277.
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2011.
Introduction to biohydrology. BiologiaBiohydrology, Special Issue, Biologia 61/Supplement 19. 61, Suppl 19:223-224. Abstract
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2006.
Neoproterozoic origin and multiple transitions to macroscopic growth in green seaweeds. Proceedings of the National Academy of Sciences of the United States of America. 117:2551-2559.
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2020.
Microbial diversity drives multifunctionality in terrestrial ecosystems. Nature Communications. 7
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2016.
It is elemental: soil nutrient stoichiometry drives bacterial diversity. Environmental Microbiology. 19:1176-1188.
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2017.
Lack of functional redundancy in the relationship between microbial diversity and ecosystem functioning. Journal of Ecology. 104:936-946.
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2016.
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2019.
Microbial soil community analyses for forensic science: application to a blind test. Forensic Science International. 270:153-158.
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2017.
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2014.
Whole stream phosphorus cycling: testing methods to assess the effect of saturation of sorption capacity on nutrient uptake length measurements. Water Research. 42(10-11):2507-2516.
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2008.
Impact of warming on CO2 emissions from streams countered by aquatic photosynthesis. Nature Geoscience. 9:758-761.
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2016.
River macrophyte indices: not the Holy Grail!. Freshwater Biology. 57:1745-1759.
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2012.
Temperature and the metabolic balance of streams. Freshwater Biology. 56:1106-1121.
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2011.
Tissue nutrient concentrations in freshwater aquatic macrophytes: high inter-taxon differences and low phenotypic response to nutrient supply. Freshwater Biology. 52(22):2073-2086.
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2007.
Macroinvertebrate abundance and proportion of trait categories in river biotopes across England and Wales. PANGEAE database Supplement to: Demars, B.O.L.; Kemp, J.L.; Friberg, N.; Usseglio-Polatera, P.; Harper, D.M. (2012): Linking biotopes to invertebrates in rivers: biological traits, taxonomic composition and diversity. Ecological Indicators.. 23:301-311.
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2012.
Stream macroinvertebrates and carbon cycling in tangled food webs. Ecosystems. Published online..
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2021.
Stream hydraulics and temperature determine the metabolism of geothermal Icelandic streams. Knowledge Management of Aquatic Ecosystem. 402:17pp.
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2011.
A seasonal survey of surface water habitats within the River Spey basin, Scotland: major nutrient properties. Aquatic Conservation: Marine and Freshwater Ecosystems. 17(6):565-583.
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2007.
Aquatic macrophytes as bioindicators of carbon dioxide in groundwater fed rivers. The Science of the Total Environment. 407(16):4752-4763.
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2009.
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2013.
Linking biotopes to invertebrates in rivers: biological traits, taxonomic composition and diversity. Ecological Indicators. 23:301-311.
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2012.
Distribution of aquatic plants in the Northern Vosges rivers: implications for biomonitoring and conservation. Aquatic Conservation: Freshwater and Marine Ecosystem. 18:619-632.
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2008.
Stream metabolism and the open diel oxygen method: principles, practice and perspectives. Limnology and Oceanography: Methods. 13:356-374.
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2015.
Distribution of aquatic macrophytes in contrasting river systems: a critique of compositional-based assessment of water quality. The Science of the Total Environment. 407(2):975-990.
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2009.
Hydrological pulses and burning of dissolved organic carbon by stream respiration. Limnology and Oceanography. 64:406-421.
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2019.
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2013.
Tissue nutrient concentrations in aquatic macrophytes: comparison across biophysical zones, surface water habitats and plant life forms. Chemistry and Ecology. 24(6):413-422.
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2008.
Identification and characterisation of a hyper-variable apoplastic effector gene family of the potato cyst nematodes. PLoS Pathogens. 10:ArticleNo.e1004391.
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2014.
A mathematical model of mucilage expansion in myxospermous seeds of Capsella bursa-pastoris L. Medic (shepherd's purse). Annals of Botany. 109:419-427.
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2012.
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2013.
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2015.
Long-term effect of re-vegetation on the microbial community of a severely eroded soil in sub-tropical China. Plant and Soil. 328:447-458.
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2010.
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2014.
GrassPlot - a database of multi-scale plant diversity in Palaearctic grasslands. Phytocoenologia. 48:331-347.
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2018.
GrassPlot - a database of multi-scale plant diversity in Palaearctic grasslands. Phytocoenologia. 48:331-347.
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2018.
Linking rhizoplane pH and bacterial density at the microhabitat scale. Journal of Microbiological Methods. 76:101-104.
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2009.
Microbial responses to carbon and nitrogen supplementation in an Antarctic dry valley soil. Soil Biology and Biochemistry. 25:55-61.
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2013.
The effects of livestock grazing on foliar arthropods associated with bird diet in upland grasslands of Scotland. Journal of Applied Ecology. 45:279-287.
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2008.
A novel method for sampling bacteria on plant root and soil surfaces at the microhabitat scale. Journal of Microbiological Methods. 75:12-18. Abstract
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2008.
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2012.
Genetic resource of European small berries according to Genberry. Sodinninkyste ir Darzininkyste. 27:371-377.
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2008.
Comparison of three alternative methods for analysis of equine faecal egg count reduction test data.. Preventive Veterinary Medicine. 93:316-323.
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2010.
Quantifying the sources of variability in equine faecal egg counts: implications for improving the utility of the method. Veterinary Parasitology. 188:120-126.
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2012.
Thermophilic versus mesophilic dark fermentation in xylose-fed fluidised bed reactors: Biohydrogen production and active microbial community. International Journal of Hydrogen Energy. 43:5473-5485.
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2018.
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2015.
Experimentally altered rainfall regimes and host root traits affect grassland arbuscular mycorrhizal fungal communities. Molecular Ecology. 27:2152-2163.
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2018.
Early childhood wheezing symptoms in relation to plasma selenium in pregnant mothers and neonates. Clinical and Experimental Allergy. 37:1000-1008.
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2007.
Early-life residential exposure to soil components in rural areas and childhood respiratory health and allergy. Science of the Total Environment. 466-467:338-344.
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2014.
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2012.
Large sub-clonal variation in Phytophthora infestans from recent severe late blight epidemics in India. Scientific Reports. 8:ArticleNo.4429.
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2018.
Use of wild genotypes in breeding program increases strawberry fruit sensorial and nutritional quality. Journal of Agricultural and Food Chemistry. 62:3944-3953.
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2014.
A comparison of ecosystem services delivered by 11 long-term monitoring sites in the UK environmental change network. Environmetrics. 22:639-648.
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2011.
Phytophthora captiosa sp. nov and Phytophthora fallax sp. nov causing crown dieback of Eucalyptus in New Zealand. Mycological Research. 110:393-404. Abstract
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2006.
Teladorsagia circumcincta: The transcriptomic response of a multi-drug-resistant isolate to ivermectin exposure in vitro. Experimental Parasitology. 127:351-356.
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2011.
What agricultural practices are most likely to deliver ‘sustainable intensification’ in the UK? Food and Energy Security. Published online..
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2018.
What agricultural practices are most likely to deliver ‘sustainable intensification’ in the UK? Food and Energy Security. 8:ArticleNo.e00148.
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2019.
What agricultural practices are most likely to deliver ‘sustainable intensification’ in the UK? Food and Energy Security. 8:ArticleNo.e00148.
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2019.
No recombination detected between potyvirus mixed infections and between potyvirus derived transgenes and heterologous challenging potyviruses. Environmental Biosafety Research. 6:207-218. Abstract
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2007.
Can root electrical capacitance be used to predict root mass in soil? Annals of Botany. 112:457-464.
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2013.
A new physical interpretation of plant root capacitance. Journal of Experimental Botany. 63:6149-6159.
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2012.
The identification and interpretation of differences in the transcriptomes of organically and conventionally grown potato tubers. Journal of Agricultural and Food Chemistry. 60:2090-2101.
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2012.
Transcriptome analysis of potato tubers - effects of different agricultural practices. Journal of Agricultural and Food Chemistry. 57:1612-1623. Abstract
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2009.
Growth and photoregulation dynamics of the picoeukaryote Pelagomonas calceolata in fluctuating light. Limnology and Oceanography. 54:823-836.
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2009.
Opportunities and challenges in using catchment-scale storage estimates from cosmic ray neutron sensors for rainfall-runoff modelling. Journal of Hydrology. 586:ArticleNo.124878.
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2020.
Using isotopes to understand the evolution of water ages in disturbed mixed land-use catchments. Hydrological Processes. 34:972-990.
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2020.
Identification of the phenolic components in Bulgarian raspberry cultivars by LC-ESI-MSn. International Journal of Agricultural Science Research. 3:127-137.
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2013.
Patterns of bird functional diversity on land-bridge island fragments. Journal of Animal Ecology. 82:781-790.
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2013.
Landscapes of challenge and change: contested views of the Cairngorms National Park. Landscape Research. 37:451-466.
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2012.
Discursive claims to knowledge: The challenge of delivering public policy objectives through new environmental governance arrangements. Journal of Rural Studies. 37:1-9.
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2015.
Community, cooperation and conflict: negotiating the social wellbeing benefits of urban greenspace experience. Landscape and Urban Planning. 112:1-9.
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2013.
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2020.
Creating a sexual self in heteronormative space: Integrations and imperatives amongst spiritual seekers at the Findhorn Community. Sociological Research Online. 16:Article7.
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2011.
You again - what are you researching this time? can you ever "leave the field"? Fieldwork in Religion. 7:164-179.
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2012.
The influence of public funding on community-based sustainability projects in Scotland. Environmental Innovation and Societal Transition. 29:25-33.
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2018.
The impact of flood action groups on the uptake of flood management measures. Climatic Change. 138:471-489.
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2016.
Making real options analysis more accessible for climate change adaptation. An application to afforestation as a flood management measure in the Scottish Borders. Journal of Environmental Management. 245:338-347.
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2019.
Measurement at the field scale of soil . Rapid Communications in Mass Spectrometry. 24:511-518.
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2010.
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2021.
A metabolomics study of cultivated potato (Solanum tuberosum) groups, Andigena, Phureja, Stenotomum and Tuberosum using gas chromatography-mass spectrometry. Journal of Agricultural and Food Chemistry. 58:1214-1223.
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2010.
Over-seasons analysis of quantitative trait loci affecting phenolic content and antioxidant capacity in raspberry. Journal of Agricultural and Food Chemistry. 60:5360-5366.
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2012.
Effects of juice matrix and pasteurization on stability of black currant anthocyanins during storage. Journal of Food Science. 82:44-52.
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2017.
Phytochemical diversity in tubers of potato cultivars and landraces using a GC-MS metabolomics approach. Journal of Agricultural and Food Chemistry. 56:10280-10291. Abstract
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2008.
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2012.
Lipophilic components in black currant seed and pomace extracts. European Journal of Lipid Science and Technology. 114:575-582.
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2012.
Induced variations in Brassinosteroid genes define barley height and sturdiness, and expand the green revolution genetic toolkit. Plant Physiology. 166:1912-1927.
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2014.
Blackcurrant reversion virus: validation of an improved diagnostic test, accelerating testing in breeding and certification of blackcurrants. Journal of Berry Research. 1:201-208.
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2011.
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2018.
Phytophthora foliorum sp. nov., a new species causing leaf blight of azalea. Mycological Research. 110:1309-1322. Abstract
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2006.
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2016.
DNA extraction from soil nematodes for multi-sample community studies. Applied Soil Ecology. 38:20-26. Abstract
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2008.
Greater coverage of the phylum Nematoda for SSU rDNA studies. Biology and Fertility of Soils. 47:333-339.
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2011.
A novel molecular approach for rapid assessment of soil nematode assemblages û variation, validation and potential applications. Methods in Ecology and Evolution. 3:12-23.
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2012.
Improved soil fertility from compost amendment increases root growth and reinforcement of surface soil on slopes. Ecological Engineering.. 71:458-465.
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2014.
Putting the eco back in ecotourism. Animal Conservation. 14:325-327.
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2011.
An assessment of the performance of the PLUS+ tool in supporting the evaluation of Water framework Directive compliance in Scottish standing waters. International Journal of Environmental Research and Public Health. 17:ArticleNo.391.
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2020.
Morphological clasification of plant cell deaths. Cell Death and Differentiation. 18:1241-1246.
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2011.
Root system architecture: opportunities and constraints for genetic improvement of crops. Trends in Plant Science. 12:474-481. Abstract
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2007.
Nodulation and nitrogen fixation by Mimosa spp. in the Cerrado and Caatinga biomes of Brazil. New Phytologist. 186:934-946.
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2010.
Vegetation burning for game management in the UK uplands is increasing and overlaps spatially with soil carbon and protected areas. Biological Conservation. 191:243-250.
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2015.
Reply to comment on: Vegetation burning for game management in the UK uplands is increasing and overlaps spatially with soil carbon and protected areas. Biological Conservation. 195:295-296.
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2016.
The influence of weather conditions during gestation on life histories in a wild Arctic ungulate. Proceedings of the Royal Society, B.. 283:ArticleNo.20161760.
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2016.
The influence of weather conditions during gestation on life histories in a wild Arctic ungulate. Proceedings of the Royal Society, B. Published online..
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2016.
Late production of CXCL8 in ruminant oro-nasal turbinate cells in response to Chlamydia abortus infection. Veterinary Immunology and Immunopathology. 168:97-102.
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2015.
Intake and productivity of lambs grazing leafy or stemmy forage rape and the effect of energy or protein supplements. Australian Journal of Experimental Agriculture. 46(7):763-769.
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2006.
The influence of herbage mass and supplementary feeding on nutrient flows and animal performance in grazing, lactating ewes. Journal of Agricultural Science. 150:644-662.
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2012.
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2006.
Transparent soil for imaging the rhizosphere. PLoS ONE. 7:e44276.
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2012.
Challenges and opportunities for quantifying roots and rhizosphere interactions through imaging and image analysis. Plant, Cell and Environment. 38:1213-1232.
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2015.
Transparent soil microcosms allow 3D spatial quantification of soil microbiological processes in vivo. Plant Signaling and Behavior. 9
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2014.
The imprint of the geographical, evolutionary and ecological context on species-area relationships. Ecology Letters. 9(2):215-227.
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2006.
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2015.
Tenancy in Norwegian agriculture. Land Use Policy. 27(3):946-956.
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2010.
Natural variation in meiotic recombination rate shapes introgression patterns in intraspecific hybrids between wild and domesticated barley. New Phytologist, Published online..
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2020.
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2013.
Postprandial cell defense system responses to meal formulations: Stratification through gene expression profiling. Molecular Nutrition and Food Research. 58:2066-2079.
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2014.
Phase and structural features of tubular halloysite (7 angstrom). Clay Minerals. 53:691-720.
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2018.
Metabolic responses of eukaryotic microalgae to environmental stress limit the ability of FT-IR spectroscopy for species identification. Algal Research- Biomass Biofuels and Bioproducts. 11:148-155.
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2015.
Expression quantitative trait loci analysis in plants. Plant Biotechnology Journal. 8:10-27.
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2010.
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2008.
Exploiting induced variation to dissect quantitative traits in barley. Biochemical Society Transactions. 38:683-688.
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2010.
Exploiting regulatory variation to identify genes underlying quantitative resistance to the wheat stem rust pathogen Puccinia graminis f. sp. tritici in barley. Theoretical and Applied Genetics. 117:261-272. Abstract
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2008.