Publications list
Filters: First Letter Of Last Name is G [Clear All Filters]
Legume-nodulating betaproteobacteria: diversity, host range, and future prospects. Molecular Plant-Microbe Interactions. 24:1276-1288.
.
2011.
Effects of pre- and postnatal polychlorinatedbiphenylexposure on emotional reactivity observed in lambs before weaning. Ecotoxicology and Environmental Safety. 74:1396-1401.
.
2011.
The spliceosome assembly factor GEMIN2 attenuates the effects of temperature on alternative splicing and circadian rhythms. Proceedings of the National Academy of Sciences of the United States of America (PNAS). 112:9382-9387.
.
2015.
.
2014.
Single amino acid substitution in the tobacco mosaic virus ORF6 protein suppresses formation of complex with eEF1A and cooperative nucleic acids binding in vitro. Doklady Biochemistry and Biophysics. 448:1-4.
.
2013.
Replacement of amino acid in the ORF6 protein of tobacco mosaic virus prevents the formation of a complex with eEF1A and the cooperative binding to nucleic acids in vitro. Proceedings of the Russian Academy of Sciences. 448:1-5.
.
2013.
Dynamic localization of two tobamovirus ORF6 proteins involves distinct organellar compartments. Journal of General Virology. 94:230-240.
.
2013.
.
2020.
Evaluation and improvement of the regulatory inference for large co-expression networks with limited sample size. BMC Systems Biology. 11:ArticleNo.62.
.
2017.
TSIS: an R package to infer alternative splicing isoform switches for time-series data. Bioinformatics. 33:3308-3310.
.
2017.
.
2021.
Water safety plan enhancements with improved drinking water quality detection techniques. Science of the Total Environment. 698:ArticleNo.134185.
.
2020.
Evaluation of a survey approach to estimating the prevalence of cattle carrying antimicrobial-resistant Escherichia coli. Veterinary Journal. 175:416-418. Abstract
.
2008.
Carbon in tundra soils in the Lake Labaz region of arctic Siberia. European Journal of Soil Science. 58(5):1164-1174.
.
2007.
Preceding crop and weed management history affect denitrification and denitrifier community structure throughout the development of durum wheat. Agriculture, Ecosystems and Environment. 212:49-63.
.
2015.
Typology and distribution of small farms in Europe: Towards a better picture. Land Use Policy. 75:784-798.
.
2018.
Typology and distribution of small farms in Europe: Towards a better picture. Land Use Policy. 75:784-798.
.
2018.
Putting transdisciplinarity into practice: a mixed mode procedure for stakeholder participation in natural resource management. Journal of Environmental Planning and Management. 58:1827-1852.
.
2015.
On the relationships between stomatal resistance and leaf temperatures in thermography. Agricultural and Forest Meteorology. 148:1908-1912.
.
2008.
The dynamics of Phytophthora infestans populations in the major potato-growing regions of Asia - a review. Plant Pathology. 70:1015-1031.
.
2021.
.
2006.
.
2019.
Second-order analysis of inhomogeneous spatial point processes with proportional intensity functions. Journal of American Statistical Association. 103(482):769-777.
.
2008.
Ensuring water resource security in China; the need for advances in evidence-based policy to support sustainable management. Environmental Science and Policy. 75:65-69.
.
2017.
Modelling nonstationary gene regulatory processes. Advances in Bioinformatics. :-749848.
.
2010.
Modelling non-stationary dynamic gene regulatory processes with the BGM model. Computational Statistics. 26:199-218.
.
2011.
Modelling non-stationary gene regulatory processes with a non-homogeneous Bayesian network and the allocation sampler. Bioinformatics. 24:2071-2078. Abstract
.
2008.
Non-homogeneous dynamic Bayesian networks for continuous data. Machine Learning. 83:355-419.
.
2011.
Improving the structure MCMC sampler for Bayesian networks by introducing a new edge reversal move. Machine Learning. 71:265-305. Abstract
.
2008.
.
2011.
A non-homogeneous dynamic bayesian network with sequentially coupled interaction parameters for applications in systems and synthetic biology. Statistical Applications in Genetics and Molecular Biology. 11
.
2012.
Berry polyphenols inhibit a-amylase in vitro: Identifying active components in rowanberry and raspberry. Journal of Agricultural and Food Chemistry. 59:2324-2331.
.
2011.
Bioconda: A sustainable and comprehensive software distribution for the life sciences. Nature Methods. 15:475-476.
.
2018.
A molecular approach to explore the extent of the threatened fungus Hypocreopsis rhododendri within wood. Fungal Biology. 116:354-362.
.
2012.
Determinants of courses of action in bioenergy villages responding to changes in renewable heat utilization policy. Utilities Policy. 41:183-192.
.
2016.
Chemical characterisation of bog peat and dried peat of the Australian Alps. Australian Journal of Soil Research. 43:963-971. Abstract
.
2005.
.
2009.
Towards an understanding of how RxLR-effector proteins are translocated from oomycetes into host cells. Fungal Genetics Reviews. 24:27-36.
.
2010.
.
2008.
The implication of input data aggregation on up-scaling soil organic carbon changes. Environmental Modelling and Software. 96:361-377.
.
2017.
Direct grafting of carbon nanotubes with ethylenediamine. Journal of Materials Chemistry. 22:21242-21248.
.
2012.
The ODD protocol for describing individual-based and agent-based models: A first update. Ecological Modelling. 221(23):2760-2768.
.
2010.
The ODD protocol for describing agent-based and other simulation models: a second update to improve clarity, replication, and structural realism. Journal of Artificial Societies and Social Simulation. 23:ArticleNo.7.
.
2020.
Comparison of the calystegine composition and content of potato sprouts and tubers from Solanum tuberosum group Phureja and Solanum tuberosum group Tuberosum. Journal of Agricultural and Food Chemistry. 56:5197-5204.
.
2008.
Probing soil physical and biological resilience data from a broad sampling of arable farms in Scotland. Soil Use and Management. 31:491-503.
.
2015.
Microbial and microfaunal community structure in cropping systems with genetically modified plants. Pedobiologia. 51:195-206. Abstract
.
2007.
Molecular sequencing and morphological analysis of a nematode community. Applied Soil Ecology. 32:325-337. Abstract
.
2006.
Soil microbial and faunal responses to herbicide tolerant maize and herbicide in two soils. Plant and Soil. 308:93-103. Abstract
.
2008.
.
2010.
Biological and physical resilience of soil amended with heavy metal-contaminated sewage sludge. European Journal of Soil Science. 56:197-206. Abstract
.
2005.
Integrating soil quality changes to arable agricultural systems following organic matter addition, or adoption of a ley-arable rotation. Applied Soil Ecology. 46(1):43-53.
.
2010.
Restoration of soil physical and biological stability are not coupled in response to plants and earthworms. Ecological Restoration. 26:102-104. Abstract
.
2008.
.
2013.
Bioindication potential of using molecular characterisation of the nematode community: response to soil tillage. European Journal of Soil Biology. 49:92-97.
.
2012.
.
2005.
Effects of season and postharvest storage on the carotenoid content of Solanum phureja potato tubers. Journal of Agricultural and Food Chemistry. 55:379-385. Abstract
.
2007.
Functional resilience of soil microbial communities depends on both soil structure and microbial community composition. Biology and Fertility of Soils. 44:745-754. Abstract
.
2008.
Varietal effects of eight paired lines of transgenic Bt maize and near-isogenic non-Bt maize on soil microbial and nematode community structure. Plant Biotechnology Journal. 5:60-68. Abstract
.
2007.
Soil microbial and faunal community responses to Bt maize and insecticide in two soils. Journal of Environmental Quality. 35:734-741. Abstract
.
2006.
.
2010.
.
2017.
Elevated amino acid biosynthesis in Phytophthora infestans during appressorium formation and potato infection. Fungal Genetics and Biology. 42:244-256. Abstract
.
2005.
.
2008.
A plant growth-promoting symbiosis between Mycena galopus and Vaccinium corymbosum seedlings. Mycorrhiza. 27:831-839.
.
2017.
Reciprocal carbon and nitrogen transfer between an ericaceous dwarf shrub and fungi isolated from Piceirhiza bicolorata ectomycorrhizas. New Phytologist. 182(2):359-366.
.
2009.
Climate change and food security. Philosophical Transactions of the Royal Society of London - Series B. 360:2139-2148. Abstract
.
2005.
Climate change and the current 'food crisis'. CAB Reviews: Perspectives in Agriculture, Veterinary Science, Nutrition and Natural Resources. 3, 090:1-10. Abstract
.
2008.
Feeding nine billion: the challenge to sustainable crop production. Journal of Experimental Botany, 62, 5233-5239.. 62:5233-5239.
.
2011.
.
2022.
Root phenomics of crops - opportunities and challenges. Functional Plant Biology. 36:922-929.
.
2009.
Physical resilience of soil to field compaction and the interactions with plant growth and microbial community structure. European Journal of Soil Science. 58:1221-1232. Abstract
.
2007.
Roots, rhizosphere and soil: the route to a better understanding of soil science? European Journal of Soil Science. 57:2-12. Abstract
.
2006.
Integrating pests and pathogens into the climate change/food security debate. Journal of Experimental Botany. 60:2827-2838. Abstract
.
2009.
Calculation of the compression index and precompression stress from soil compression test data. Soil and Tillage Research. 89:45-57. Abstract
.
2006.
Contributions of roots and rootstocks to sustainable, intensified crop production. Journal of Experimental Botany. 64:1209-1222.
.
2013.
Attribution of climate change: a methodology to estimate the potential contribution to increases in potato yield in Scotland since 1960. Global Change Biology. 18:1372-1388.
.
2012.
.
2009.
Tillage-induced environmental conditions in soil and substrate limitation determine biogenic gas production. Soil Biology & Biochemistry. 38:2614-2628. Abstract
.
2006.
The Ph1 locus suppresses Cdk2-type activity during premeiosis and meiosis in wheat. The Plant Cell. 24:152-162.
.
2012.
Methodological bias associated with soluble protein recovery from soil. Scientific Reports. 8:ArticleNo.11186.
.
2018.
Is soluble protein mineralisation and protease activity in soil regulated by supply or demand? Soil Biology and Biochemistry. 150:ArticleNo.108007..
.
2020.
Do plants use root-derived proteases to promote the uptake of soil organic nitrogen? Plant and Soil. 456:355-367.
.
2020.
A geospatial framework to support integrated biogeochemical modelling in the United Kingdom. Environmental Modelling and Software. 68:219-232.
.
2015.
.
2020.
Adsorption of phosphate by halloysite (7 angstrom) nanotubes (HNTs). Clay Minerals. 55:184-193.
.
2020.
Effect of pH on the cation exchange capacity of some halloysites nanotubes. Clay Minerals. 51:373-383.
.
2016.
Spatially explicit estimates of in situ filtration by native oysters to augment ecosystem services during restoration. Estuaries and Coasts. 42:792-805.
.
2019.
Hybrid plants preserve unique genetic variation in the St Helena endemic trees Commidendrum rotundifolium DC Roxb. and C. spurium (G.Forst.) DC. Conservation Genetics. 18:241-246.
.
2017.
Dietary carbohydrate rather than protein intake drives colonic microbial fermentation during weight loss. European Journal of Nutrition. 58:1147-1158.
.
2019.
Annual variation of dietary deoxynivalenol exposure during years of different Fusarium prevalence: a pilot biomonitoring study. Food Additives and Contaminants Part A - Chemistry Analysis Control Exposure and Risk Assessment. 31:1579-1585.
.
2014.
How do marine diatoms fix 10 billion tonnes of inorganic carbon per year? Canadian Journal of Botany - Review Canadienne de Botanique. 83:898-908. Abstract
.
2005.
.
2009.
Optimising thermal imaging as a technique for detecting stomatal closure induced by drought stress under greenhouse conditions. Physiologia Plantarum. 127:507-518. Abstract
.
2006.
.
2015.
Exploring thermal imaging variables for the detection of stress responses in grapevine under different irrigation regimes. Journal of Experimental Botany. 58:815-825. Abstract
.
2007.
The impact of drought on leaf physiology of Quercus suber L. trees: comparison of an extreme drought event with chronic rainfall reduction. Journal of Experimental Botany. 61:4361-4371.
.
2010.
The hydrological response of heavy clay grassland soils to rainfall in south-west England using . Rapid Communications in Mass Spectrometry. 24:475-482.
.
2010.
Using artificial fluorescent particles as tracers of livestock wastes within an agricultural catchment. Science of the Total Environment. 409:1095-1103.
.
2011.
Roots affect the response of heterotrophic soil respiration to temperature in tussock grass microcosms. Annals of Botany. 110:253-258.
.
2012.
New insight into wild red raspberry populations using simple sequence repeat markers. Journal of the American Society for Horticultural Science. 134:109-119. Abstract
.
2009.
Mapping gene H controlling cane pubescence in raspberry and its association with resistance to cane botyritis and spur blight, rust and cane spot. Theoretical and Applied Genetics. 112:818-831. Abstract
.
2006.
Mapping QTLs for developmental traits in raspberry from bud break to ripe fruit. Theoretical and Applied Genetics. 118:1143-1155. Abstract
.
2009.
Towards an understanding of the nature of resistance to Phytophthora root rot in red raspberry. Theoretical and Applied Genetics. 123:585-601.
.
2011.
Genetical and comparative genomics of Brassica under altered Ca supply identifies Arabidopsis Ca-transporter orthologs. The Plant Cell. 26:2818-2830.
.
2014.
Using size fractionation and Pb isotopes to study Pb transport in the waters of an organic-rich upland catchment. Environmental Science and Technology. 40(4):1250-1256.
.
2006.
Towards an understanding of the control of 'crumbly' fruit in red raspberry. SpringerPlus. 4:223.
.
2015.
.
2007.
Genetic and environmental regulation of plant architectural traits and opportunities for pest and disease control in raspberry. Annals of Applied Biology. 165:318-328.
.
2014.
Calcium polysulfide remediation of hexavalent chromium from chromite ore processing residue. The Science of the Total Environment. 364(1-3):32-44.
.
2006.
.
2021.
Escherichia coli O157:H7 transcriptome datasets for comparison of RNA-seq and microarray platforms. Data in Brief. 22:126-131.
.
2019.
Factors affecting the incidence and severity of Spongospora subterranea infection and galling in potato roots. Plant Pathology. 56:1005-1013. Abstract
.
2007.
.
2005.
Testing a framework to co-construct social innovation actions. Insights from seven marginalized rural areas. Sustainability. 12:ArticleNo.1441.
.
2020.
When and how to imitate your neighbours: lessons from and for FEARLUS. Journal of Artificial Societies and Social Simulation. 12(3):2.
.
2009.
Experiments with a model of domestic energy demand. Journal of Artificial Societies and Social Simulation. 20:ArticleNo.11.
.
2017.
Combining diverse data sources for CEDSS, an agent-based model of domestic energy demand. Structure and Dynamics: eJournal of Anthropological and Related Sciences. 7
.
2014.
Ramifying feedback networks, cross-scale interactions and emergent quasi-individuals in Conway's Game of Life. Artificial Life. 15(3):351-375.
.
2009.
Resilience, panarchy and world-systems analysis. Ecology and Society. 12(1):24.
.
2007.
Size matters: large-scale replications of experiments with FEARLUS. Advances in Complex Systems. 13(4):453-467.
.
2010.
Agent-based modelling of socio-ecological systems: Models, projects and ontologies. Ecological Complexity. 40:ArticleNo.100728.
.
2019.
Effect of short-term exposure to high-temperature on total gene expression in the leaves of four raspberry (Rubus idaeus L.) cultivars. Journal of Horticultural Science and Biotechnology. 89:532-541.
.
2014.
Chlorophyll fluorescence and flowering behaviour of annual-fruiting raspberry cultivars under elevated temperature regimes. European Journal of Horticultural Science. 78:193-202.
.
2013.
Bioactive polyphenols and cardiovascular disease: chemical antagonists, pharmacological agents or xenobiotics that drive an adaptive response? British Journal of Clinical Pharmacology. 174:1209-1225.
.
2017.
Bioavailable concentrations of delphinidin and its metabolite, gallic acid, induce antioxidant protection associated with increased intracellular glutathione in cultured endothelial cells. Oxidative Medicine and Cellular Longevity. :ArticleNo.9260701.
.
2017.
Bioactive polyphenols and cardiovascular disease: chemical antagonists, pharmacological agents or xenobiotics that drive an adaptive response? British Journal of Clinical Pharmacology. Published online..
.
2017.
The Irish potato famine pathogen Phytophthora infestans originated in central Mexico rather than the Andes. Proceedings of the National Academy of Sciences of the USA. 111:8791-8796.
.
2014.
.
2014.
Synthesis of nanoparticles using plants. Nanoindustry. 7:16-22.
.
2012.
.
2021.
.
2019.
.
2014.
What the "food security" agenda means for animal conservation in terrestrial ecosystems. Animal Conservation. 15:115-116.
.
2012.
Forging future organizational leaders for sustainability science. Nature Sustainability. 2:647-649.
.
2019.
Effects of drought stress and its sudden relief on free radical processes in barley. Journal of the Science of Food and Agriculture. 85:47-53. Abstract
.
2005.
.
2011.
Recovery of nitrogen from different sources following applications to winter wheat at and after anthesis. Field Crops Research. 100:143-154.
.
2007.
Three-dimensional modelling of chick embryo eye development and growth using high resolution magnetic resonance imaging. Experimental Eye Research. 89:511-521.
.
2009.
.
2019.
It's not the 'what', but the 'how': Exploring the role of debt in natural resource (un)sustainability. PLoS ONE. 13:ArticleNo.e0201141.
.
2018.
.
2014.
Weak isolation by distance and geographic diversity gradients persist in Scottish relict pine forest, linked to flowering asynchrony and effective gene flow. iForest - Biogeosciences and Forestry. 11:449-458.
.
2018.
National meeting of the Spanish Society of Nitrogen Fixation (XV SEFIN). Symbiosis. 67:1-2.
.
2016.
Spatial Bayesian belief networks as a planning decision tool for mapping ecosystem services trade-offs on multifunctional forested landscapes. Environmental Research. 144:15-26.
.
2016.
.
2012.
Cucumber mosaic virus 2b protein subcellular targets and interactions: Their significance to RNA silencing suppressor activity. Molecular Plant-Microbe Interactions. 23:294-303.
.
2010.
Processing of 13C-labelled diatoms by a bathyal community at sub-zero temperatures. Marine Ecology Progress Series. 421:39-50.
.
2011.
Microbial response to organic matter enrichment in the oligotrophic Levantine Basin (Eastern Mediterranean). Geomicrobiology Journal. 29:648-655.
.
2012.
.
2013.
Occurrence of priming in the degradation of lignocellulose in marine sediments. PLoS ONE. 10:e0143917.
.
2015.
White and green tea polyphenols inhibit pancreatic lipase in vitro. Food Research International. 43:1537-1544.
.
2010.
The economic analysis in the implementation of the water framework directive in Spain. International Journal of River Basin Management. 11:301-310.
.
2013.
Microbial rhodopsins are major contributors to the solar energy captured in the sea. Science Advances. 5:ArticleNo.eaaw8855.
.
2019.
Automated saccharification assay for determination of digestibility in plant materials. Biotechnology for Biofuels. 3:-23.
.
2010.
Berry-enriched diet in salt-sensitive hypertensive rats: metabolic fate of (poly)phenols and the role of gut microbiota. Nutrients. 11:ArticleNo.2634.
.
2019.
.
2005.
Light regulates plant alternative splicing through the control of transcriptional elongation. Molecular Cell. 73:1066-1074.e3.
.
2019.
The perception of the welfare of sheep in extensive systems. Small Ruminant Research. 62(3):215-225.
.
2006.
Welfare assessment in sheep. In Practice. 33:508-516.
.
2011.
Small ruminant welfare: Levelling the playing field or raising the bar - a European perspective. Small Ruminant Research. 110:108-111.
.
2013.
.
2022.
NMR imaging of developing barley grains. Journal of Cereal Science. 43:70-78. Abstract
.
2006.
.
2016.
Inferring attribute non-attendance from discrete experiments: implications for benefit transfer. Environmental and Resource Economics. 60:497-520.
.
2015.
A framework for valuing spatially targeted peatland restoration. Ecosystem Services. 9:20-33.
.
2014.
How sure can you be? A framework for considering delivery uncertainty in benefit assessments based on stated preference methods Journal of Agricultural Economics. 62:25-46.
.
2011.
.
2011.
Insurance, prevention or just wait and see? Public preferences for water management strategies in the context of climate change Ecological Economics. 69(11):2279-2291.
.
2010.
Using local knowledge to model asymmetric preference formation in willingness to pay for environmental services. Journal of Environmental Management. 92:531-541.
.
2011.
Modeling the ecological impact of phosphorus in catchments with multiple environmental stressors. Journal of Environmental Quality. 48:1336-1346.
.
2019.
Testing the utility of structure-from-motion photogrammetry reconstructions using small unmanned aerial vehicles and ground photography to estimate the extent of upland soil erosion. Earth Surface Processes and Landforms. Published online..
.
2017.
Testing the utility of structure-from-motion photogrammetry reconstructions using small unmanned aerial vehicles and ground photography to estimate the extent of upland soil erosion. Earth Surface Processes and Landforms. 42:1860-1871.
.
2017.
Tracing of particulate organic C sources across the terrestrial-aquatic continuum, a case study at the catchment scale (Carminowe Creek, South West England). Science of the Total Environment. 616-617:1077-1088.
.
2018.
.
2019.
Genome sequence of the plant-pathogenic bacterium Dickeya dadantii 3937. Journal of Bacteriology. 193:2076-2077.
.
2011.
Efficiency of functional regression estimators for combining multiple laser scans of cDNA microarrays. Biometrical Journal. 51:45-55.
.
2009.
Colour displays for categorical images. Color Research and Application. 32:304-309. Abstract
.
2007.
A spatiotemporal auto-regressive moving average model for solar radiation. Journal of the Royal Statistical Society Series C - Applied Statistics. 57:343-355. Abstract
.
2008.
Alignment and sub-pixel interpolation of images using Fourier methods. Journal of Applied Statistics. 34:217-230. Abstract
.
2007.
Two-dimensional generalisations of dynamic programming for image analysis. Statistics and Computing. 19:49-56.
.
2009.
Metabolic engineering of carotenoid biosynthesis in plants. Trends in Biotechnology. 26:139-145. Abstract
.
2008.
Rice auxin influx carrier OsAUX1 facilitates root hair elongation in response to low external phosphate. Nature Communications. 9:ArticleNo.1408.
.
2018.
Rice auxin influx carrier OsAUX1 facilitates root hair elongation in response to low external phosphate. Nature Communications. 9:ArticleNo.1408.
.
2018.
The use of even-chain alkanes sprayed onto herbage as rate of passage markers in goats. Livestock Production Science. 100:195-202.
.
2006.
Growth rate hypothesis and efficiency of protein synthesis under different sulphate concentrations in two green algae. Plant Cell and Environment. 38:2313-2317.
.
2015.
A tale of two eras: Phytoplankton composition influenced by oceanic paleochemistry. Geobiology. 16:498-506.
.
2018.
Physiological responses of the green alga Dunaliella parva (Volvocales, Chlorophyta) to controlled incremental changes in the N source. Functional Plant Biology. 34:925-934. Abstract
.
2007.
Nitrogen and sulfur assimilation in plants and algae. Aquatic Botany. 118:45-61.
.
2014.
.
2021.
CO2 concentrating mechanisms in algae: mechanisms, environmental modulation and evolution. Annual Review of Plant Biology. 56:99-131. Abstract
.
2005.
.
2014.
A GIS-based tool for an integrated assessment of spatial planning trade-offs with aquaculture. Science of the Total Environment. Published online.
.
2018.
A GIS-based tool for an integrated assessment of spatial planning trade-offs with aquaculture. Science of the Total Environment. 627:1644-1655.
.
2018.
The effect of image compression on synthetic PROBA-V images. International Journal of Remote Sensing. 35:2639-2653.
.
2014.
Woodland networks in a changing climate: Threats from land use change. Biological Conservation. 149:93-102.
.
2012.
Exploring robustness of biodiversity policy with a coupled metacommunity and agent-based model. Journal of Land Use Science. 6:175-193.
.
2011.
CORINE-based landscape indices weakly correlate with plant species richness in a northern European landscape transect. Landscape Ecology. 24(1):53-64.
.
2009.
Local environmental effects and spatial effects in macroecological studies using mapped abundance classes: the case of the rook Corvus frugilegus in Scotland. Journal of Animal Ecology. 75(5):1140-1146.
.
2006.
.
2015.
Mapping hotspots in landscape functionality; a case study on farmland afforestation in Scotland. Landscape Ecology. 22(8):1255-1264.
.
2007.