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Found 2145 results

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Rietman H, Champouret N, Hein I, Niks RE, Vleeshouwers VGAA.  2010.  Plant and oomycetes, an intimate relationship: co-evolutionary principles and impact on agricultural practice. CAB Review. 58:1-17.
Hinojosa MB, Carreira JA, Garc R, Rodr JM, Daniell TJ, Griffiths BS.  2010.  Plant treatment, pollutant load and soil type effects in the rhizosphere ecology of trace element polluted soils. Ecotoxicology and Environmental Safety. 73:970-981. Abstract
Loades KW, Bengough AG, Bransby MF, Hallett PD.  2010.  Planting density influence on fibrous root reinforcement of soils. Ecological Engineering. 36:276-284. Abstract
Holden N.  2010.  Plants as reservoirs for human enteric pathogens (Review). CAB Reviews: Perspectives in Agriculture, Veterinary Science, Nutrition and Natural Resources. 5, 047:1-11.
Andrews M, Hodge S, Raven JA.  2010.  Positive plant microbial interactions. Annals of Applied Biology. 157:317-320.
Hotchkiss EJ, Dagleish MP, Willoughby K, McKendirck IJ, Finlayson J, Zadoks RN, Newsome E, Brulisauer F, Gunn GJ, Hodgson JC.  2010.  Prevalence of Pasteurella multocida and other respiratory pathogens in the nasal tract of Scottish calves. Veterinary Record. 167:555-560.
Gill CIR, McDougall GJ, Glidewell SM, Stewart D, Shen Q, Tuohy K, Dobbin A, Boyd A, Brown E, Haldar S et al..  2010.  Profiling of phenols in human faecal water after raspberry supplementation. Journal of Agricultural and Food Chemistry. 58:10389-10395.
Robinson G, Wright S, Elwin K, Hadfield SJ, Katzer F, Bartley PM, Hunter PR, Nath M, Innes EA, Chalmers RM.  2010.  Re-description of Cryptosporidium cuniculus Inman and Takeuchi 1979 (Apicomplexa:Cryptosporidiidae): morphology, biology and phylogeny. International Journal for Parasitology. 40:1539-1548.
Oliva R, Win J, Raffaele S, Boutemy L, Bozkurt TO, Chaparro-Garcia A, Segretin ME, Stam R, Schornack S, Cano LM et al..  2010.  Recent developments in effector biology of filamentous plant pathogens. Cellular Microbiology. 12:705-715.
Lees AK, Brierley JL, Stewart JA, Hilton AJ, Wale SJ, Gladders P, Bradshaw NJ, Peters JC.  2010.  Relative importance of seed-tuber and soilborne inoculum in causing black dot disease of potato. Plant Pathology. 59:693-702.
Wattegedera S, Watson DM, Hope JC, Kaiser P, Sales J, McInnes CJ, Entrican G.  2010.  Relative quantitative kinetics of interferon-gamma and interleukin-10 mRNA and protein production by activated ovine peripheral blood mononuclear cells. Veterinary Immunology and Immunopathology. 136:34-42.
Thorsen MK, Hopkins DW, Woodward S, McKenzie BM.  2010.  Resilience of microorganisms and aggregation of a sandy calcareous soil to amendment with organic and synthetic fertilizer. Soil Use and Management. 26:149-157.
Mickovski SB, Bransby MF, Bengough AG, Davies MCR, Hallett PD.  2010.  Resistance of simple plant root systems to uplift loads. Canadian Geotechnical Journal. 47:78-95. Abstract
Hartley IP, Hopkins DW, Sommerkorn M, Wookey PA.  2010.  The response of organic matter mineralisation to nutrient and substrate additions in subarctic soils. Soil Biology & Biochemistry. 42:92-100.
Kylli P, Nohynek L, Puupponen-Pimia R, Westerlund-Wikstrom B, McDougall GJ, Stewart D, Heinonen M.  2010.  Rowanberry phenolics: compositional analysis and bioactivites. Journal of Agricultural and Food Chemistry. 58:11985-11992.
Cock PJA, Fields CJ, Goto N, Heuer ML, Rice PM.  2010.  The Sanger FASTQ file format for sequences with quality scores, and the Solexa/Illumina FASTQ variants. Nucleic Acids Research. 38:1767-1771.
Broadley MR, Alcock J, Alford J, Cartwright P, Foot I, Fairweather-Tait SJ, Hart DJ, Hurst R, Knott P, McGrath SP et al..  2010.  Selenium biofortification of high-yielding winter wheat (Triticum aestivum L.) by liquid or granular Se fertilisation. Plant and Soil. 332:5-18.
Broadley MR, O'Lochlainn S, Hammond JP, Bowen HC, Cakmak I, Eker S, Erdem H, King GJ, White PJ.  2010.  Shoot zinc (Zn) concentration varies widely within Brassica oleracea L. and is affected by soil Zn and phosphorus (P) levels. Journal of Horticultural Science & Biotechnology. 85:375-380.
Stroud JL, Broadley MR, Foot I, Fairweather-Tait SJ, Hart DJ, Hurst R, Knott P, Mowat H, Norman K, Scott P et al..  2010.  Soil factors affecting selenium concentration in wheat grain and the fate and speciation of Se fertilisers applied to soil. Plant and Soil. 332:19-30.
Rustenholz C, Hedley PE, Morris J, Choulet F, Feuillet C, Waugh R, Paux E.  2010.  Specific patterns of gene space organisation revealed in wheat by using the combination of barley and wheat genomic resources. BMC Genomics. 11:-714.
Hornyik C, Terzi LC, Simpson GG.  2010.  The Spen family protein FPA controls alternative cleavage and polyadenylation of RNA. Developmental Cell. 18:203-213.
Hodgson JG, Sharafi M, Jalili A, Diaz S, Montserrat-Marti G, Palmer C, Cerabolini B, Pierce S, Hamzehee B, Asri Y et al..  2010.  Stomatal vs. genome size in angiosperms: The somatic tail wagging the genomic dog? Annals of Botany. 105:573-584.
Joshi MV, Mann SG, Antelmann H, Widdick DA, Fyans JK, Chandra G, Hutchings MI, Toth IK, Hecker M, Loria R et al..  2010.  The twin arginine protein transport pathway exports multiple virulence proteins in the plant pathogen Streptomyces scabies. Molecular Microbiology. 77:252-271.
Zhang K, Greenwood DJ, Spracklen WP, Rahn CR, Hammond JP, White PJ, Burns IG.  2010.  A universal agro-hydrological model for water and nitrogen cycles in the soil-crop system SMCR_N: Critical update and further validation. Agricultural Water Management. 97:1411-1422.
Lichner L, Hallett PD, Orfanus T, Czachor H, Rajkai K, Sir M, Tesai M.  2010.  Vegetation impact on the hydrology of an aeolian sandy soil in a continental climate. Ecohydrology. 3:413-420.
Waugh R, Marshall DF, Thomas WTB, Comadran J, Russell JR, Close T, Stein N, Hayes P, Muehlbauer G, Cockram J et al..  2010.  Whole-genome association mapping in elite inbred crop varieties. Genome. 53:967-972.
Bouwman FG, de Roos B, Rubio-Aliaga I, Crosley LK, Duthie SJ, Mayer CD, Horgan GW, Polley AC, Heim C, Coort SLM et al..  2011.  2D-electrophoresis and multiplex immunoassay proteomic analysis of different body fluids and cellular components reveal known and novel markers for extended fasting. BMC Medical Genomics. 4
Holobinko A, Meier-Augenstein W, Kemp HF, Prowse T, Ford SM.  2011.  2H stable isotope analysis of human tooth enamel: a new tool for forensic human provenancing? Rapid Communications in Mass Spectrometry. 25:910-916.
Hill PW, Quilliam RS, DeLuca TH, Farrar J, Farrell M, Roberts P, Newsham KK, Hopkins DW, Bardgett RD, Jones DL.  2011.  Acquisition and assimilation of nitrogen as peptide-bound and D-enantiomers of amino acids by wheat. PLoS ONE. 6:e19220.
Sun XL, Gilroy EM, Chini A, Nurmberg PL, Hein I, Lacomme C, Birch PRJ, Hussain A, Yun BW, Loake GJ.  2011.  ADS1 encodes a MATE-transporter that negatively regulates plant disease resistance. New Phytologist. 192:471-482.
Thirugnanasambandam A, Wright KM, Havis ND, Whisson SC, Newton AC.  2011.  Agrobacterium-mediated transformation of the barley pathogen Ramularia collo-cygni with fluorescent marker tags and live tissue imaging of infection development. Plant Pathology. 60:929-937.
Spies A, Korzun V, Bayles R, Rajaraman J, Hedley PE, Schweizer P.  2011.  Allele mining in barley genetic resources reveals genes of race-nonspecific powdery mildew resistance. Frontiers in Plant Science: Plant Nutrition. 2:e113.
Yong SYC, Choong CY, Cheong PL, Pang SL, Amalina RN, Harikrishna JA, Mat-Isa MN, Hedley PE, Milne L, Vaillancourt RE et al..  2011.  Analysis of ESTs generated from inner bark tissue of an Acacia auriculiformis x Acacia mangium hybrid. Tree Genetics and Genomes. 7:143-152.
Debeljak M, Squire GR, Kocev D, Hawes C, Young MW, Dzeroski S.  2011.  Analysis of time series data on agroecosystem vegetation using predictive clustering trees. Ecological Modelling. 222:2524-2529.
Knapp CW, McCluskey SM, Singh BK, Campbell CD, Hudson G, Graham DW.  2011.  Antibiotic resistance gene abundances correlate with metal and geochemical conditions in archived Scottish soils. PLoS ONE. 6:e27300.
Lawson DJ, Holtrop G, Flint H.  2011.  Bayesian analysis of non-linear differential equation models with application to a gut microbial ecosystem. Biometrical Journal. 53:543-556.
Horgan GW.  2011.  The behaviour of a neutral model of weight regulated only by body mass. Journal of Theoretical Biology. 270:1-6.
Palacio S, Paterson E, Sim A, Hester AJ, Millard P.  2011.  Browsing affects intra-ring carbon allocation in species with contrasting wood anatomy. Tree Physiology. 31:150-159.
Speed JDM, Austrheim G, Hester AJ, Mysterud A.  2011.  Browsing interacts with climate to determine tree-ring increment. Functional Ecology. 25:1018-1023.
Thornton B, Zhang ZL, Mayes RW, Hogberg MN, Midwood AJ.  2011.  Can gas chromatography combustion isotope ratio mass spectrometry be used to quantify organic compound abundance? Rapid Communications in Mass Spectrometry. 23:2433-2438.
Prager K, Helming K, Hagedorn K.  2011.  The challenge of developing effective soil conservation policies (editorial). Land Degradation and Development, Special Issue, The Challenge of Effective Soil Conservation Policies. 22:1-4.
Jeong GY, Hillier S, Kemp RA.  2011.  Changes in mineralogy of loess-paleosol sections across the Chinese Loess Plateau. Quaternary Research. 75:245-255.
Pakeman RJ, Huband S, Kriel A, Lewis R.  2011.  Changes in the management of Scottish machair communities and associated habitats from the 1970s to the present. Scottish Geographical Journal. 127:267-287.
Limpens J, Granath G, Gunnarsson U, Aerts R, Bayley S, Bragazza L, Bubier J, Buttler A, van den Berg LJL, Francez AJ et al..  2011.  Climatic modifiers of the response to nitrogen deposition in peat-forming Sphagnum mosses: a meta-analysis. New Phytologist. 191:496-507.
Chen XW, Hedley PE, Morris J, Liu H, Niks RE, Waugh R.  2011.  Combining genetical genomics and bulked segregant analysis-based differential expression: an approach to gene localization. Theoretical and Applied Genetics. 122:1375-1383.
Cullen DW, Harwood WA, Smedley M, Davies HV, Taylor MA.  2011.  Comparison of DNA walking methods for isolation of transgene flanking regions in GM potato. Molecular Biotechnology. 49:19-31.
Burthe S, Butler A, Searle KR, Hall S, Thackeray SJ, Wanless S.  2011.  Demographic consequences of increased winter births in a large aseasonally breeding mammal (Bos taurus) in response to climate change. Journal of Animal Ecology. 80:1134-1144.
Nunn FG, Burgess STG, Innocent G, Nisbet AJ, Bates P, Huntley JF.  2011.  Development of a serodiagnostic test for sheep scab using recombinant protein Pso o 2. Molecular and Cellular Probes. 25:212-218.
Spencer K, Suzuki K, Hillier S.  2011.  The development of rare earth element-labelled potassium depleted clays for use as cohesive sediment tracers in aquatic environments. Journal of Soils and Sediments. 11:1052-1061.
Toth IK, van der Wolf JM, Saddler G, Lojkowska E, Helias V, Pirhonen M, Tsror L, Elphinstone JG.  2011.  Dickeya species: an emerging problem for potato production in Europe. Plant Pathology. 60:385-399.
Day-Stirrat RJ, Milliken KL, Dutton SP, Loucks RG, Hillier S, Aplin AC, Schleicher AM.  2011.  Discussion in response to Knut Bjorlykke regarding JMPG_1376 "Open-System Chemical Behavior In Deep Wilcox Group Mudstones, Texas Gulf Coast, USA". Marine and Petroleum Geology. 28:1383-1384.
Townsend SE, Newey SJ, Thirgood SJ, Haydon DT.  2011.  Dissecting the drivers of population cycles: interactions between parasites and mountain hare demography. Ecological Modelling. 222:48-56.
Sun B, Hallett PD, Caul S, Daniell TJ, Hopkins DW.  2011.  Distribution of soil carbon and microbial biomass in arable soils under different tillage regimes. Plant and Soil. 338:17-25.
Hepburn CD, Pritchard DW, Cornwall CE, McLeod RJ, Beardall J, Raven JA, Hurd CL.  2011.  Diversity of carbon use strategies in a kelp forest community: implications for a high CO2 ocean. Global Change Biology. 17:2488-2497.
Walker AW, Ince J, Duncan SH, Webster L, Holtrop G, Ze X, Brown DS, Stares MD, Scott P, Bergerat A et al..  2011.  Dominant and diet-responsive groups of bacteria within the human colonic microbiota. International Society for Microbial Ecology (ISME) Journal. 5:220-230.
Johnson D, Vachon J, Britton AJ, Helliwell RC.  2011.  Drought alters carbon fluxes in alpine snowbed ecosystems through contrasting impacts on graminoids and forbs. New Phytologist. 190:740-749.
Byrne SL, Foito A, Hedley PE, Morris J, Stewart D, Barth S.  2011.  Early response mechanisms of perennial ryegrass (Lolium perenne) to phosphorous deficiency. Annals of Botany. 107:243-254.
Hogenhout SA, Bos JIB.  2011.  Effector proteins that modulate plant-insect interactions. Current Opinion in Plant Biology. 14:422-428.
Jayakody S, Sibbald AM, Mayes RW, Hooper RJ, Gordon IJ, Lambin X.  2011.  Effects of human disturbance on the diet composition of wild red deer Cervus elaphus. European Journal of Wildlife Research. 57:939-948.
Johnson SN, Barton AT, Clark KE, Gregory PJ, McMenemy LS, Hancock RD.  2011.  Elevated atmospheric carbon dioxide impairs the performance of root-feeding vine weevils by modifying root growth and secondary metabolites. Global Change Biology. 17:688-695.
McIntosh BS, Ascough, J. C. II, Twery M, Chew J, Elmahdi A, Haase D, Harou JJ, Hepting D, Cuddy S, Jakeman AJ et al..  2011.  Environmental decision support systems (EDSS) development - challenges and best practices. Environmental Modelling and Software. 26:1389-1402.
Flower K, Thomas D, Heather J, Ramasubramanyan S, Jones S, Sinclair AJ.  2011.  Epigenetic control of viral life-cycle by a DNA-methylation dependent transcription factor. PLoS ONE. 6:e29522.
Marcon M, Mariano K, Braga RA, Paglis CM, Scalco MS, Horgan GW.  2011.  Estimation of total leaf area in perennial plants using image analysis. Revista Brasileira de Engenharia Agricola e Ambiental. 15:96-101.
Hofinger BJ, Russell JR, Bass CG, Baldwin T, dos Reis M, Hedley PE, Li Y, Macaulay M, Waugh R, Hammond-Kosack KE et al..  2011.  An exceptionally high nucleotide and haplotype diversity and a signature of positive selection for the eIF4E resistance gene in barley are revealed by allele mining and phylogenetic analyses of natural populations. Molecular Ecology. 20:3653-3668.
Whisson SC, Avrova AO, Boevink PC, Armstrong MR, Seman ZA, Hein I, Birch PRJ.  2011.  Exploiting knowledge of pathogen effectors to enhance late blight resistance in potato. Potato Research. 54:325-340.
Mayer CD, Lorent J, Horgan GW.  2011.  Exploratory analysis of multiple omics datasets using the adjusted RV coefficient. Statistical Applications in Genetics and Molecular Biology. 10:14.
Zhao Y, Peth S, Hallett PD, Wang XY, Giese M, Gao YZ, Horn R.  2011.  Factors controlling the spatial patterns of soil moisture in a grazed semi-arid steppe investigated by multivariate geostatistics. Ecohydrology. 4:36-48.
Subedi M, Hocking TJ, Fullen MA, McCrea AR, Milne E.  2011.  Factors influencing the effectiveness of an agro-environmental project in China. Outlook on Agriculture. 40:157-163.
Moreno-Jimenez E, Beesley L, Lepp NW, Dickinson NM, Hartley W, Clemente R.  2011.  Field sampling of soil pore water to evaluate trace element mobility and associated environmental risk. Environmental Pollution. 159:3078-3085.
McGeoch SC, Holtrop G, Fyfe C, Lobley GE, Pearson DW, Abraham P, Megson IL, MacRury SM, Johnstone AM.  2011.  Food intake and dietary glycaemic index in free-living adults with and without type 2 diabetes melitus. Nutrients. 3:683-693.
Bernhardt-Romermann M, Gray A, Vanbergen AJ, Berges L, Bohner A, Brooker RW, De Bruyn L, De Cinti B, Dirnbrock T, Grandin U et al..  2011.  Functional traits and local environment predict vegetation responses to disturbance: a pan-European multi-site-experiment. Journal of Ecology. 99:777-787.
Hammond JP, Broadley MR, Bowen HC, Spracklen WP, Hayden R, White PJ.  2011.  Gene expression changes in phosphorus deficient potato (Solanum tuberosum L.) leaves and the potential for diagnostic gene expression markers. PLoS ONE. 6:e24606.
O' Lochlainn SE, Fray RG, Hammond JP, King GJ, White PJ, Young SD, Broadley MR.  2011.  Generation of nonvernal-obligate, faster-cycling Noccaea caerulescens lines through fast neutron mutagenesis. New Phytologist. 189:409-414.
Druka A, Franckowiak JD, Lundqvist U, Bonar N, Alexander J, Houston K, Radovic S, Shahinnia F, Vendramin V, Morgante M et al..  2011.  Genetic dissection of barley morphology and development. Plant Physiology. 155:617-627.
Glasner JD, Yang C, Reverchon S, Hugouvieux-Cotte-Pattat N, Condemine G, Bohin JP, Van GF, Yang S, Franza T, Expert D et al..  2011.  Genome sequence of the plant-pathogenic bacterium Dickeya dadantii 3937. Journal of Bacteriology. 193:2076-2077.
Kikuchi T, Cotton JA, Dalzell JJ, Hasegawa K, Kanzaki N, McVeigh P, Takanashi T, Tsai IJ, Assefa SA, Cock PJA et al..  2011.  Genomic insights into the origin of parasitism in the emerging plant pathogen Bursaphelenchus xylophilus. PLoS Pathogens. 7:e1002219.
Lambe NR, Richardson RI, Macfarlane JM, Nevison I, Haresign W, Matika O, Bunger L.  2011.  Genotypic effects of the Texel Muscling QTL (TM-QTL) on meat quality in purebred Texel lambs. Meat Science. 89:125-132.
Beattie JH, Nicol F, Gordon MJ, Reid MD, Cantlay L, Horgan GW, Kwun IS, Ahn JY, Ha TY.  2011.  Ginger phytochemicals mitigate the obesogenic effects of a high-fat diet in mice: a proteomic and biomarker network analysis. Molecular Nutrition and Food Research. 55:S203-S213.
Fitton N, Ejerenwa C, Bhogal A, Edgington P, Black HIJ, Lilly A, Barraclough D, Worral F, Hillier J, Smith P.  2011.  Greenhouse gas mitigation potential of agricultural land in Great Britain. Soil Use and Management.. 27:491-501.
Speed J, Austrheim G, Hester AJ, Mysterud A.  2011.  Growth limitation of mountain birch caused by sheep browsing at the altitudinal treeline. Forest Ecology and Management. 261:1344-1352.
Chen YP, Prashar A, Erichsen JT, To CH, Hocking PM, Guggenheim JA.  2011.  Heritability of ocular component dimensions in chickens: genetic variants controlling susceptibility to experimentally-induced myopia and pre-treatment eye size are distinct. Investigative Opthalmology & Visual Science. 52:4012-4020.
de Roos B, Wanders AJ, Wood S, Horgan GW, Rucklige G, Reid M, Siebelink E, Brouwer IA.  2011.  A high intake of industrial or ruminant trans fatty acids does not affect the plasma proteome in healthy men. Proteomics. 11:3928-3934.
Lochlainn S, Amoah S, Graham NS, Alamer K, Rios JJ, Kurup S, Stoute A, Hammond JP, Ostergaard L, King GJ et al..  2011.  High resolution melt (HRM) analysis is an efficient tool to genotype EMS mutants in complex crop genomes. Plant Methods. 7:1-9.
Russell WR, Gratz SW, Duncan SH, Holtrop G, Ince J, Scobbie L, Duncan G, Johnstone AM, Lobley GE, Wallace RJ et al..  2011.  High-protein, reduced-carbohydrate weight-loss diets promote metabolite profiles likely to be detrimental to colonic health. American Journal of Clinical Nutrition. 93:1062-1072.
Liu H, McNicol JW, Bayer MM, Morris JA, Cardle L, Marshall DF, Schulte D, Stein N, Shi B, Tandien S et al..  2011.  Highly parallel gene-to-BAC addressing using microarrays. Biotechniques. 50:165-174.
Haegeman A, Jones JT, Danchin EGJ.  2011.  Horizontal gene transfer in nematodes: a catalyst for plant parasitism? Molecular Plant-Microbe Interactions. 24:879-887.
Russell JR, Bayer MM, Booth C, Cardle L, Hackett CA, Hedley PE, Jorgensen L, Morris JA, Brennan RM.  2011.  Identification, utilisation and mapping of novel transcriptome-based markers from blackcurrant (Ribes nigrum). BMC Plant Biology. 11:147.
Fletcher T, Leonardi G, Hough RL, Goessler W, Gurzau E, Koppova K, Rudnai P, Vahter M.  2011.  The impact of exposure metric choice for cancers related to arsenic in drinking water in Central Europe. Epidemiology. 22:S102-S103.
George TS, Brown LK, Newton AC, Hallett PD, Sun BH, Thomas WTB, White PJ.  2011.  Impact of soil tillage on the robustness of the genetic component of variation in phosphorus (P) use efficiency in barley (Hordeum vulgare L.). Plant and Soil. 339:113-123.
Brennan RM, Russell JR, Jorgensen L, Abreu IN, Jarret D, Gordon S, Hackett CA.  2011.  Improving breeding efficiency in blackcurrant - the application of new selection techniques in Ribes. Acta Horticulturae. 946:157-160.
Prager K, Hagemann N, Schuler J, Heyn N.  2011.  Incentives and enforcement: the institutional design and policy mix for soil conservation in Brandenburg (Germany). Land Degradation and Development, Special Issue, The Challenge of Effective Soil Conservation Policies. 22:111-123.
Mclean MH, Murray GI, Stewart KN, Norrie G, Mayer C, Hold GL, Thompson J, Fyfe M, Hope M, Mowat NAG et al..  2011.  The inflammatory microenvironment in colorectal neoplasia. PLoS ONE. 6:e15366.
Britton AJ, Helliwell RC, Lilly A, Dawson LA, Fisher JM, Coull MC, Ross J.  2011.  An integrated assessment of ecosystem carbon pools and fluxes across an oceanic alpine toposequence. Plant and Soil. 345:287-302.
Halas S, Skrzypek G, Meier-Augenstein W, Pelc A, Kemp HF.  2011.  Inter-laboratory calibration of new silver orthophosphate comparison materials for stable oxygen isotope analysis of phosphates. Rapid Communications in Mass Spectrometry. 25:579-584.
Ramsay L, Comadran J, Druka A, Marshall DF, Thomas WTB, Macaulay M, MacKenzie K, Simpson CG, Fuller J, Bonar N et al..  2011.  INTERMEDIUM-C, a modifier of lateral spikelet fertility in barley, is an ortholog of the maize domestication gene TEOSINTE BRANCHED 1. Nature Genetics. 43:169-172.
McKeown NK, Bishop JL, Cuadros J, Hillier S, Amador E, Makarewicz HD, Parente M, Silver EA.  2011.  Interpretation of reflectance spectra of clay mineral-silica mixtures: implications for Martian clay mineralogy at Mawrth Vallis. Clays and Clay Minerals. 59:400-415.
Ballingall KT, Nath M, Holliman A, Laming E, Steele PJ, Willoughby K.  2011.  Lack of evidence for an association between MHC diversity and the development of bovine neonatal pancytopenia in Holstein dairy cattle. Veterinary Immunology and Immunopathology. 141:128-132.
Gyaneshwar P, Hirsch AM, Moulin L, Chen WM, Elliott GN, Bontemps C, Estrada-de los Santos P, Gross E, dos Reis J, F.B et al..  2011.  Legume-nodulating betaproteobacteria: diversity, host range, and future prospects. Molecular Plant-Microbe Interactions. 24:1276-1288.
Yao H, Gao Y, Nicol GW, Campbell CD, Prosser JI, Zhang L, Han W, Singh BK.  2011.  Links between ammonia oxidizer community structure, abundance and nitrification potential in acidic soils. Applied and Environmental Microbiology. 77:4618-4625.
Hooftman DAP, Flavell AJ, Jansen H, den Nijs HCN, Syed NH, Sorensen AP, Wengel PO, van de Wiel C.  2011.  Locus-dependent selection in crop-wild hybrids of lettuce under field conditions and its implication for GM crop development. Evolutionary Applications. 4:648-659.
Macdonald CA, Clark IM, Zhao FJ, Hirsch PR, Singh BK, McGrath SP.  2011.  Long-term impacts of zinc and copper enriched sewage sludge additions on bacterial, archaeal and fungal communities in arable and grassland soils. Soil Biology and Biochemistry. 43:932-941.
Haanes H, Roed KH, Perez-Espona S, Rosef O.  2011.  Low genetic variation support bottlenecks in Scandinavian red deer. European Journal of Wildlife Research. 57:1137-1150.
Whitfield S, Reed M, Thomson KJ, Christie M, Stringer L, Quin CH, Anderson R, Moxey A, Hubacek K.  2011.  Managing peatland ecosystem services: current UK policy and future challenges in a changing world. Scottish Geographical Journal. 127:209-230.
Lapierre H, Vazquez-Anon M, Parker D, Dubreuil P, Holtrop G, Lobley GE.  2011.  Metabolism of 2-hydroxy-4-(methylthio)butanoate (HMTBA) in lactating dairy cows. Journal of Dairy Science. 94:1526-1535.
Rubio-Aliaga I, de Roos B, Duthie SJ, Crosley LK, Mayer C, Horgan GW, Colquhoun IJ, Le Gall G, Huber F, Kremer W et al..  2011.  Metabolomics of prolonged fasting in humans reveals new catabolic markers. Metabolomics. 7:375-387.
Caron-Lormier G, Bohan DA, Dye R, Hawes C, Humphry RW, Raybould A.  2011.  Modelling an ecosystem: the example of agro-ecosystems. Ecological Modelling. 222:1163-1173.
Grzegorczyk M, Husmeier D, Rahnenfuhrer J.  2011.  Modelling non-stationary dynamic gene regulatory processes with the BGM model. Computational Statistics. 26:199-218.
Bohan DA, Powers SJ, Champion G, Haughton AJ, Hawes C, Squire GR, Cussans J, Mertens SK.  2011.  Modelling rotations: can crop sequences explain arable weed seedbank abundance? Weed Research. 51:422-432.
van Doorn WG, Beers EP, Dangl JL, Franklin-Tong VE, Gallois P, Hara-Nishimura I, Jones AM, Kawai-Yamada M, Lam E, Mundy J et al..  2011.  Morphological clasification of plant cell deaths. Cell Death and Differentiation. 18:1241-1246.
Perez-Mendoza D, Coulthurst SJ, Humphris S, Campbell E, Welch M, Toth IK, Salmond GPC.  2011.  A multi-repeat adhesin of the phytopathogen, Pectobacterium atrosepticum, is secreted by a Type 1 pathway and is subject to complex regulation involving a non-canonical diguanylate cyclase. Molecular Microbiology. 82:719-733.
Hugron S, Andersen R, Poulin M, Rochefort L.  2011.  Natural plant colonization of borrow pits in boreal forest highlands of eastern Canada. Botany. 89:451-465.
Grzegorczyk M, Husmeier D.  2011.  Non-homogeneous dynamic Bayesian networks for continuous data. Machine Learning. 83:355-419.
Xiao H, Hourihan JM, Brown LJ, McMahon M, Stewart D, Hayes JD.  2011.  Nrf2-mediated induction of antioxidant response element-driven gene expression by flavonoids is dependent on their chemical structure. Toxicology. 290:126-127.
Qian B, Gregorich EG, Gameda S, Hopkins DW, Wang XL.  2011.  Observed soil temperature trends associated with climate change in Canada. Journal of Geophysical Research. 116:16pp.
Torres GA, Gong Z, Iovene M, Hirsch C, Buell CR, Bryan GJ, Novak P, Macas J, Jiang J.  2011.  Organization and evolution of subtelomeric satellite repeats in the potato genome. Genes Genomes Genetics. 1:85-92.
Yan X, De Clercq P, Han R, Jones JT, Chen S, Moens M.  2011.  Osmotic responses of different strains of Steinernema carpocapsae. Nematology. 13:845-851.
Toorop PE, Herrera Ballester M, Deng W, Iannetta PPM.  2011.  Osmotic stress tolerance of Capsella bursa-pastoris seeds contributes to bet-hedging in arable fields. Association of Applied Biologists - Agricultural Ecology Research: It's Role in Delivering Sustainable Farm Systems, Dundee, 15-16 June 2011. Aspects of Applied Biology. 109:39-40.
Comadran J, Ramsay L, MacKenzie K, Hayes P, Close TJ, Muehlbauer G, Stein N, Waugh R.  2011.  Patterns of polymorphism and linkage disequilibrium in cultivated barley. Theoretical and Applied Genetics. 122:523-531.
Ross HA, Morris WL, Ducreux LJM, Hancock RD, Verrall SR, Morris JA, Tucker GA, Stewart D, Hedley PE, McDougall GJ et al..  2011.  Pectin engineering to modify product quality in potato. Plant Biotechnology Journal. 9:848-856.
Peng X, Hallett PD, Zhang B, Horn R.  2011.  Physical response of rigid and non-rigid soils to analogues of biological exudates. European Journal of Soil Science. 62:676-684.
Johnson SN, Staley JT, McLeod FAL, Hartley SE.  2011.  Plant-mediated effects of soil invertebrates and summer drought on above-ground multitrophic interactions. Journal of Ecology. 99:57-65.
Mattila PH, Hellstrom J, McDougall GJ, Dobson G, Pihlava JM, Tiirikka.T, Stewart D, Karjalainen RO.  2011.  Polyphenol and vitamin C content in European commercial blackcurrant juice products. Food Chemistry. 127:1216-1223.
Moloney PD, Hearne JW, Gordon IJ, McLeod S.  2011.  Portfolio optimisation techniques for a mixed-grazing scenario for Australia's rangelands. Natural Resource Modeling. 24:102-116.
Ross HA, Wright KM, McDougall GJ, Roberts AG, Chapman SN, Morris WL, Hancock RD, Stewart D, Tucker GA, James EK et al..  2011.  Potato tuber pectin structure is influenced by pectin methyl esterase activity and impacts on cooked potato texture. Journal of Experimental Botany. 62:371-381.
Fox NJ, White PCL, McClean CJ, Marion G, Evans A, Hutchings MR.  2011.  Predicting impacts of climate change on Fasciola hepatica risk. PLoS ONE. 6:e16126.
Wojniusz S, Vogele C, Ropstad E, Evans N, Robinson J, Suetterlin S, Erhard HW, Solbakk AK, Endestad T, Oldberg DE et al..  2011.  Prepubertal gonadotropin-releasing hormone analog leads to exagerrated behavioral and emotional sex differences in sheep. Hormones and Behavior. 59:22-27.
Gilroy EM, Breen S, Whisson SC, Squires J, Hein I, Kaczmarek M, Turnbull D, Boevink P, Lokossou A, Cano LM et al..  2011.  Presence/absence, differential expression and sequence polmorphisms between PiAVR2 and PiAVR2-like in Phytophthora infestans determine virulence on R2 plants. New Phytologist. 191:763-776.
Moles AT, Wallis IR, Foley WJ, Warton DI, Bisigato AJ, Clark CJ, Cohen PS, Cornwell WK, Edwards EWR, Gonzales-Ojeda T et al..  2011.  Putting plant defences on the map: a test of the idea that plants are better defended at lower latitudes. New Phytologist. 191:777-788.
Belenguer A, Holtrop G, Duncan SH, Anderson SE, Calder AG, Flint HJ, Lobley GE.  2011.  Rates of production and utilization of lactate by microbial communities from the human colon. FEMS Microbiology Ecology. 77:107-119.
Hammond JP, Mayes S, Bowen HC, Graham NS, Hayden RM, Love CG, Spracklen WP, Wang J, Welham SJ, White PJ et al..  2011.  Regulatory hotspots are associated with plant gene expression under varying soil phosphorus supply in Brassica rapa. Plant Physiology. 156:1230-1241.
Rojas I, Becerra P, Galvez N, Laker J, Bonacic C, Hester AJ.  2011.  Relationship between fragmentation, degradation and native and exotic species richness in an Andean temperate forest in Chile. Gayana Botanica. 68:163-175.
Silvar C, Casas AM, Igartua E, Ponce-Molina LJ, Gracia MP, Schweizer G, Herz M, Flath K, Waugh R, Kopahnke D et al..  2011.  Resistance to powdery mildew in Spanish barley landraces is controlled by different sets of quantitative trait loci. Theoretical and Applied Genetics. 123:1019-1028.
Sparrow AD, Gregorich EG, Hopkins DW, Novis P, Elberling B, Greenfield LG.  2011.  Resource limitations on soil microbial activity in an Antarctic dry valley. Soil Science Society of America Journal. 75:2188-2197.
Sibbald AM, Hooper RJ, McLeod JE, Gordon IJ.  2011.  Responses of red deer (Cervus elaphus) to regular disturbance by hill walkers. European Journal of Wildlife Research. 57:817-825.
Beesley L, Moreno-Jimenez E, Gomez-Eyles JL, Harris E, Robinson B, Sizmur T.  2011.  A review of biochars' potential role in the remediation, revegetation and restoration of contaminated soils. Environmental Pollution. 159:3269-3282.
Fuschino JR, Guschina IA, Dobson G, Yan ND, Harwood JL, Arts MT.  2011.  Rising water temperatures alter lipid dynamics and reduce N-3 essential fatty acid concentrations in Scenedesmus obliquus (Chlorophyta). Journal of Phycology. 47:763-774.
Fuschino JR, Guschina IA, Dobson G, Yan ND, Harwood JL, Arts MT.  2011.  Rising water temperatures alter lipid dynamics and reduce N-3 essential fatty acid concentrations in Scenedesmus obliquus (chlorophyta). Journal of Phycology. 47:763-764.
Aalders IH, Hough RL, Towers W.  2011.  Risk of erosion in peat soils - an investigation using Bayesian belief networks. Soil Use and Management. 27:538-549.
Jiang N, Wang MH, Jia TY, Wang L, Leach L, Hackett CA, Marshall DF, Luo ZW.  2011.  A robust statistical method for association-based eQTL analysis. PLoS ONE. 6:e23192.
Bengough AG, McKenzie BM, Hallett PD, Valentine TA.  2011.  Root elongation, water stress, and mechanical impedance: a review of limiting stresses and beneficial root tip traits. Journal of Experimental Botany. 62:59-68.
Carvalhais LC, Dennis PG, Fedoseyenko D, Hajirezaei MR, Borriss R, von Wiren N.  2011.  Root exudation of sugars, amino acids, and organic acids by maize as affected by nitrogen, phosphorus, potassium, and iron deficiency. Journal of Plant Nutrition and Soil Science. 174:3-11.
Dawson JJC, Tetzlaff D, Speed M, Hrachowitz M, Soulsby C.  2011.  Seasonal controls on DOC dynamics in nested upland catchments in NE Scotland. Hydrological Processes. 25:1647-1658.
Chen YP, Hocking PM, Wang L, Povazay B, Prashar A, To CH, Erichsen JT, Feldkaemper M, Hofer B, Drexler W et al..  2011.  Selective breeding for susceptibility to myopia reveals a gene-environment interaction. Investigative Ophthalmology and Visual Science. 52:4003-4011.
Hart DJ, Fairweather-Tait SJ, Broadley MR, Dickinson SJ, Foot I, Knott P, McGrath SP, Mowat H, Norman K, Scott PR et al..  2011.  Selenium concentration and speciation in biofortified flour and bread: Retention of selenium during grain biofortification, processing and production of Se-enriched food. Food Chemistry. 126:1771-1778.
Hagemann N, Prager K.  2011.  Shortcomings of political instruments for agricultural soil conservation. Berichte uber Landwirtschaft. 89:331-350.
Prager K, Schuler J, Helming K, Zander P, Ratinger T, Hagedorn K.  2011.  Soil degradation, farming practices, institutions and policy responses: An analytical framework. Land Degradation and Development, Special Issue, The Challenge of Effective Soil Conservation Policies.. 22:32-46.
Powlson DS, Gregory PJ, Whalley WR, Quinton JN, Hopkins DW, Whitmore AP, Hirsch PR, Goulding KWT.  2011.  Soil management in relation to sustainable agriculture and ecosystem services. Food Policy. 36:S72-S87.
Powlson DS, Brookes PC, Whitmore AP, Goulding KWT, Hopkins DW.  2011.  Soil organic matters. European Journal of Soil Science. 62:1-4.
Andrivon D, Avendano-Corcoles J, Cameron AM, Carnegie SF, Cooke LR, Corbiere R, Detourne D, Dowley LJ, Evans D, Forisekova K et al..  2011.  Stability and variability of virulence of Phytophthora infestans assessed in a ring test across European laboratories. Plant Pathology. 60:556-565.
Bisi F, Newey SJ, Nodari M, Wauters LA, Harrison A, Thirgood SJ, Martinoli A.  2011.  The strong and the hungry: Bias in capture methods for mountain hares Lepus timidus. Wildlife Biology. 17:311-316.
Belanche A, Abecia L, Holtrop G, Guada JA, Castrillo C, de la Fuente G, Balcells J.  2011.  Study of the effect of presence or absence of protozoa on rumen fermentation and microbial protein contribution to the chyme. Journal of Animal Science. 89:4163-4174.
Hammond JP, White PJ.  2011.  Sugar signalling in root responses to low phosphorus availability. Plant Physiology. 156:1033-1040.
Barakate A, Stephens J, Goldie A, Hunter WN, Marshall DF, Hancock RD, Lapierre C, Morreele K, Boerjane W, Halpin C.  2011.  Syringyl lignin is unaltered by severe sinapyl alcohol dehydrogenase suppression in tobacco. Plant Cell. 23:4492-4506.
O' Lochlainn SE, Bowen HC, Fray RG, Hammond JP, King GJ, White PJ, Graham NS, Broadley MR.  2011.  Tandem quadruplication of HMA4 in the zinc (Zn) and cadmium (Cd) hyperaccumulator Noccaea caerulescens. PLoS ONE. 6:e17814.
Alexandrov GA, Ames D, Aumann C, Bellocchi G, Bruen M, Crout N, Erechtchoukova M, Hildebrandt A, Hoffman F, Jackisch C et al..  2011.  Technical assessment and evaluation of environmental models and software: Letter to the Editor. Environmental Modelling and Software. 26:328-336.
Tolkamp BJ, Allcroft DJ, Barrio JP, Bley TAG, Howie JA, Jacobsen TB, Morgan CA, Schweitzer DPN, Wilkinson S, Yeates MP et al..  2011.  The temporal structure of feeding behaviour. American Journal of Physiology - Regulatory, Integrative and Comparative Physiology. 301:R378-R393.
Graham J, Hackett CA, Smith K, Woodhead M, MacKenzie K, Tierney I, Cooke DEL, Bayer MM, Jennings N.  2011.  Towards an understanding of the nature of resistance to Phytophthora root rot in red raspberry. Theoretical and Applied Genetics. 123:585-601.
Cook N, Aziz N, Hedley PE, Morris J, Milne L, Karley AJ, Hubbard SF, Russell JR.  2011.  Transcriptome sequencing of an ecologically important graminivorous sawfly: a resource for marker development. Conservation Genetics Resources. 3:789-795.
Street LE, Subke JA, Sommerkorn M, Heinemeyer A, Williams M.  2011.  Turnover of recently assimilated carbon in arctic bryophytes. Oecologia. 167:325-337.
Mayer KFX, Martis M, Hedley PE, Simkova H, Liu H, Morris JA, Steuernagel B, Taudien S, Roessner S, Gundlach H et al..  2011.  Unlocking the barley genome by chromosomal and comparative genomics. Plant Cell. 23:1249-1263.
Granger SJ, Bol R, Hawkins JMB, White SM, Naden PS, Old GH, Marsh JK, Bilotta GS, Brazier RE, Macleod CJA et al..  2011.  Using artificial fluorescent particles as tracers of livestock wastes within an agricultural catchment. Science of the Total Environment. 409:1095-1103.
Hill PW, Farrar J, Roberts P, Farrell M, Grant H, Newsham KK, Hopkins DW, Bardgett RD, Jones DL.  2011.  Vascular plant success in a warming Antarctic may be due to efficient nitrogen acquisition. Nature Climate Change. 1:50-53.
Sutherland LA, Gabriel D, Hathaway-Jenkins L, Pascual U, Schmutz U, Rigby D, Godwin R, Sait S, Sakrabani R, Kunin B et al..  2012.  The 'neighbourhood effect': a multidisciplinary assessment of the case for farmer co-ordination in agri-environmental programmes. Land Use Policy. 29:502-512.
Foyer CH, Kerchev P, Hancock RD.  2012.  The ABA-Insensitive-4 (AB14) transcription factor links redox, hormone and sugar signalling pathways (Review). Plant Signaling and Behavior. 7:276-281.
Johnson SN, Clark KE, Hartley SE, Jones TH, McKenzie SW, Koricheva J.  2012.  Aboveground-belowground herbivore interactions: a meta-analysis. Ecology. 93:2208-2215.
Pritchard L, Holden NJ, Bielaszewska M, Karch H, Toth IK.  2012.  Alignment-free design of highly discriminatory diagnostic primer sets for Escherichia coli O104:H4 outbreak strains. PLoS ONE. 7:e34498.
Spies A, Korzun V, Bayles R, Rajaraman J, Himmelback A, Hedley PE, Schweizer P.  2012.  Allele mining in barley genetic resources reveals genes of race-non-specific powdery mildew resistance. Frontiers in Plant Science. 2:113.
Rodriguez-Gutierrez G, Duthie GG, Wood S, Morrice P, Nicol F, Reid M, Cantlay LL, Kelder T, Horgan GW, Fernandez-Bolanos Guzman J et al..  2012.  Alperujo extract, hydroxytyrosol, and 3,4-dihydroxyphenylglycol are bioavailable and have antioxidant properties in vitamin e-deficient ratsua proteomics and network analysis approach. Molecular Nutrition and Food Research. 56:1131-1147.
James A, Syed NH, Bordage S, Marshall J, Nimmo GA, Jenkins GI, Herzyk P, Brown JWS, Nimmo HG.  2012.  Alternative splicing mediates responses of the Arabidopsis thaliana circadian clock to temperature changes. The Plant Cell. 24:961-981.
Houston K, Druka A, Bonar N, Macaulay M, Lundqvist U, Franckowiak JD, Morgante M, Stein N, Waugh R.  2012.  Analysis of the barley bract suppression gene Trd1. Theoretical and Applied Genetics. 125:33-45.
De Smet I, White PJ, Bengough AG, Dupuy L, Parizot B, Casimiro I, Heidstra R, Laskowski M, Lepetit M, Hochholdinger F et al..  2012.  Analyzing lateral root development: how to move forward. The Plant Cell. 24:15-20.
Minh ND, Hough RL, Thuy LT, Nyberg Y, Mai LB, Vinh NC, Khai NM, Oborn I.  2012.  Assessing dietary exposure to cadmium in a metal recycling community in Vietnam: age and gender aspects. Science of the Total Environment. 416:164-171.
Wemelsfelder F, Hunter AE, Paul ES, Lawrence AB.  2012.  Assessing pig body language: agreement and consistency between pig farmers, veterinarians, and animal activists. Journal of Animal Science. 90:3652-3665.
Bartley K, Huntley JF, Wright HW, Nath M, Nisbet AJ.  2012.  Assessment of cathepsin D and L-like proteinases of poultry red mite, Dermanyssus gallinae (De Geer), as potential vaccine antigens. Parasitology. 139:755-765.
MacKenzie K, Hackett CA.  2012.  Association mapping in a simulated barley population. Euphytica. 183:337-347.
White PJ, Broadley MR, Hammond JP, Ramsay G, Subramanian NK, Thompson JA, Wright GM.  2012.  Bio-fortification of potato tubers using foliar zinc-fertiliser. Journal of Horticultural Science and Biotechnology. 87:123-129.
Subbarao GV, Sahrawat KL, Nakahara K, Ishikawa T, Rao GP, Hash CT, George TS, Kishii M, Rao PS, Nardi P et al..  2012.  Biological nitrification inhibition (BNI) - a novel strategy to regulate nitrification in agricultural systems. Advances in Agronomy. 114:249-302.
Ross L, Woodin S, Hester AJ, Thompson DBA, Birks HJ.  2012.  Biotic homogenization of upland vegetation: patterns and drivers at multiple spatial scales over five decades. Journal of Vegetation Science. 23:755-770.
Linder HP, Bykova O, Dyke J, Etienne RS, Hickler T, Kuehn I, Marion G, Ohlemueller R, Schymanski SJ, Singer A.  2012.  Biotic modifiers, environmental modulation and species distribution models. Journal of Biogeography. 39:2179-2190.
Wei Z, Hillier S, Gadd GM.  2012.  Biotransformation of manganese oxides by fungi: solubilization and production of manganese oxalate biominerals. Environmental Microbiology. 14:1744-1752.
Liu XY, Wei S, Wang F, James EK, Zagar C, Wang YP, Dong X, Hui T, Xia LG.  2012.  Burkholderia and Cupriavidus spp. are the preferred symbionts of Mimosa spp. in Southern China. FEMS Microbiology Ecology. 80:417-426.
Logie L, Harthill J, Patel K, Bacon S, Hamilton DL, Macrae K, McDougall GJ, Wang HH, Xue L, Jiang H et al..  2012.  Cellular responses to the metal-binding properties of metformin. Diabetes. 61:1423-1433.
Sonnenberg R, Bransby MF, Bengough AG, Hallett PD, Davies MCR.  2012.  Centrifuge modelling of soil slopes containing model plant roots. Canadian Geotechnical Journal. 49:1-17.
Newton AC, Torrance L, Holden N, Toth IK, Cooke DEL, Blok VC, Gilroy EM.  2012.  Chapter three - climate change and defence against pathogens in plants. Advances in Applied Microbiology. 81:89-132.
Alizai A, Hillier S, Clift PD, Giosan L, Hurst A, VanLaningham S, Macklin M.  2012.  Clay mineral variations in holocene terrestrial sediments from the Indus Basin. Quaternary Research. 77:368-381.
Fridley JD, Grime JP, Huston MA, Pierce S, Smart SM, Thompson K, Boerger L, Brooker RW, Cerabolini BEL, Gross N et al..  2012.  Comment on "Productivity Is a Poor Predictor of Plant Species Richness". Science. 335:1441.
Krueger T, Quinton JN, Freer J, Macleod CJA, Bilotta GS, Brazier RE, Hawkins JMB, Haygarth PM.  2012.  Comparing empirical models for sediment and phosphorus transfer from soils to water at field and catchment scale under data uncertainty. European Journal of Soil Science. 63:221-223.

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The James Hutton Research Institute is the result of the merger in April 2011 of MLURI and SCRI. This merger formed a new powerhouse for research into food, land use, and climate change.