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Walker CA, K M, Grenville-Briggs LJ, Avrova AO, Horner NR, McKinnon AD, Whisson SC, Birch PRJ, van West P.  2008.  A putative DEAD-box RNA-helicase is required for normal zoospore development in the late blight pathogen Phytophthora infestans. Fungal Genetics and Biology. 45:954-962. Abstract
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Evans MJ, Batson WG, Gordon IJ, Belton E, Chaseling T, Fletcher D, Harrison M, McElroy T, Mungoven A, Newport J et al..  2021.  The 'Goldilocks Zone' of predation: the level of fox control needed to select predator resistance in a reintroduced mammal in Australia. Biodiversity and Conservation. Published online..
Sutherland LA, Gabriel D, Hathaway-Jenkins L, Pascual U, Schmutz U, Rigby D, Godwin R, Sait S, Sakrabani R, Kunin B et al..  2012.  The 'neighbourhood effect': a multidisciplinary assessment of the case for farmer co-ordination in agri-environmental programmes. Land Use Policy. 29:502-512.
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Norra S, Handley LL, Berner Z, St D.  2005.  13C and 15N natural abundances of urban soils and herbaceous vegetation in Karlsruhe, Germany. European Journal of Soil Science. 56:607-620. Abstract
Song BK, Hein I, Druka A, Waugh R, Marshall DF, Nadarajah K, Yap SJ, Ratnam W.  2009.  The 172 kb genomic DNA region of the O. rufipogon ylg1.1 locus: comparative sequence analysis with O. sativa ssp. japonica and O. sativa ssp. indica. Functional & Integrative Genomics. 9:97-108.
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Harris NL, Cock PJA, Lapp H, Chapman B, Davey R, Fields C, Hokamp K, Munoz-Torres M.  2016.  The 2015 Bioinformatics Open Source Conference (BOSC 2015). PLoS Computational Biology. 12:e1004691.
Gill N, Fisher D, Hynes J.  2019.  25 years of protest: migration control and the power of local activism. Geography. 104:134-140.
Bouwman FG, de Roos B, Rubio-Aliaga I, Crosley LK, Duthie SJ, Mayer CD, Horgan GW, Polley AC, Heim C, Coort SLM et al..  2011.  2D-electrophoresis and multiplex immunoassay proteomic analysis of different body fluids and cellular components reveal known and novel markers for extended fasting. BMC Medical Genomics. 4
Holobinko A, Meier-Augenstein W, Kemp HF, Prowse T, Ford SM.  2011.  2H stable isotope analysis of human tooth enamel: a new tool for forensic human provenancing? Rapid Communications in Mass Spectrometry. 25:910-916.
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Bizet F, Bengough AG, Hummel I, Bogeat-Triboulot MB, Dupuy LX.  2016.  3D deformation field in growing plant roots reveals both mechanical and biological responses to axial mechanical forces. Journal of Experimental Botany. 67:5605-5614.
Katayama T, Wilkinson MD, Micklem G, Kawashima S, Yamaguchi A, Nakao M, Yamamoto Y, Okamoto S, Oouchida K, Hong-Woo C et al..  2013.  The 3rd DBCLS BioHackathon: improving life science data integration with Semantic Web technologies. Journal of Biomedical Semantics. 4
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Foyer CH, Kerchev P, Hancock RD.  2012.  The ABA-Insensitive-4 (AB14) transcription factor links redox, hormone and sugar signalling pathways (Review). Plant Signaling and Behavior. 7:276-281.
Millett J, Hester AJ, Millard P, MacDonald AJS.  2008.  Above- and below-ground competition effects of two heathland species: Implications for growth and response to herbivory in birch saplings. Basic and Applied Ecology. 9(1):55-66.
Johnson SN, Clark KE, Hartley SE, Jones TH, McKenzie SW, Koricheva J.  2012.  Aboveground-belowground herbivore interactions: a meta-analysis. Ecology. 93:2208-2215.
Dupuy LX, Wright G, Thompson JA, Taylor A, Dekeyser S, White CP, Thomas WTB, Nightingale M, Hammond JP, Graham NS et al..  2017.  Accelerating root system phenotyping of seedlings through a computer-assisted processing pipeline. Plant Methods. 13:ArticleNo.57.
Flynn KJ, St John M, Raven JA, Skibinski DOF, Allen JI, Mitra A, Hofmann EE.  2015.  Acclimation, adaptation, traits and trade-offs in plankton functional type models: reconciling terminology for biology and modelling. Journal of Plankton Research. 37:683-691.
George TS, Simpson RJ, Hadobas PA, Marshall DJ, Richardson AE.  2007.  Accumulation and phosphatase-lability of organic phosphorus in fertilised pasture soils. Australian Journal of Agricultural Research. 58:47-55. Abstract
Horgan GW, Perrin A, Whybrow S, Macdiarmid JI.  2016.  Achieving dietary recommendations and reducing greenhouse gas emissions: modelling diets to minimise the change from current intakes. International Journal of Behavioral Nutrition and Physical Activity. 13
Andrist-Rangel Y, Simonsson M, Oborn I, Hillier S.  2013.  Acid-extractable potassium in agricultural soils: Source minerals according by differential and quantitative x-ray diffraction. Journal of Plant Nutrition and Soil Science. 176:407-419.
Huang Y, Long X, Chapman SJ, Yao HY.  2015.  Acidophilic denitrifiers dominate the N2O production in a 100-year-old tea orchard soil. Environmental Science and Pollution Research. 22:4173-4182.
Hill PW, Quilliam RS, DeLuca TH, Farrar J, Farrell M, Roberts P, Newsham KK, Hopkins DW, Bardgett RD, Jones DL.  2011.  Acquisition and assimilation of nitrogen as peptide-bound and D-enantiomers of amino acids by wheat. PLoS ONE. 6:e19220.
Hopkins M, Duarte C, Beaulieu K, Finlayson G, Gibbons C, Johnstone AM, Whybrow S, Horgan GW, Blundell JE, Stubbs RJ.  2019.  Activity energy expenditure is an independent predictor of energy intake in humans. International Journal of Obesity. 43:1466-1474.
Ceola S, Montanari A, Krueger T, Dyer F, Kreibich H, Westerberg I, Carr G, Cudennec C, Elshorbagy A, Savenije H et al..  2016.  Adaptation of water resources systems to changing society and environment: a statement by the International Association of Hydrological Sciences. Hydrological Sciences Journal. 61:2803-2817.
Ruiz-Ramos M, Ferrise R, Rodriguez A, Lorite IJ, Bindi M, Carter TR, Fronzek S, Palosuo T, Pirttioja N, Baranowski P et al..  2017.  Adaptation response surfaces for managing wheat under perturbed climate and CO2 in a Mediterranean environment. Agricultural Systems. Published online..
Ruiz-Ramos M, Ferrise R, Rodriguez A, Lorite IJ, Bindi M, Carter TR, Fronzek S, Palosuo T, Pirttioja N, Baranowski P et al..  2017.  Adaptation response surfaces for managing wheat under perturbed climate and CO2 in a Mediterranean environment. Agricultural Systems. Published online..
Ruiz-Ramos M, Ferrise R, Rodriguez A, Lorite IJ, Bindi M, Carter TR, Fronzek S, Palosuo T, Pirttioja N, Baranowski P et al..  2018.  Adaptation response surfaces for managing wheat under perturbed climate and CO2 in a Mediterranean environment. Agricultural Systems. 159:260-274.
Ruiz-Ramos M, Ferrise R, Rodriguez A, Lorite IJ, Bindi M, Carter TR, Fronzek S, Palosuo T, Pirttioja N, Baranowski P et al..  2018.  Adaptation response surfaces for managing wheat under perturbed climate and CO2 in a Mediterranean environment. Agricultural Systems. 159:260-274.
Matthews RB, Rivington M, Muhammed S, Newton AC, Hallett PD.  2013.  Adapting crops and cropping systems to future climates to ensure food security: the role of crop modelling. Global Food Security. 2:24-28.
Butler JRA, Bergsen AM, Bohensky E, Aitkenhead M, Hamden R, Pedde S.  2020.  Adapting scenarios for climate adaptation: Practitioners’ perspectives on a popular planning method. Environmental Science and Policy. 104:13-19.
Sarkki S, Tinch R, Niemelä J, Heink U, Waylen KA, Timaeus J, Young JC, Watt AD, Neßhöver C, Van Den Hove S.  2015.  Adding ‘iterativity’ to the credibility, relevance, legitimacy: A novel scheme to highlight dynamic aspects of science-policy interfaces. Environmental Science and Policy. 54:505-512.
Ramezanian A, Dahlin AS, Campbell CD, Hillier S, Mannerstedt-Fogelfors B, Oborn I.  2013.  Addition of a volcanic rockdust to soils has no observable effects on plant yield and nutrient status or on soil microbial activity. Plant and Soil. 367:419-436.
Sun XL, Gilroy EM, Chini A, Nurmberg PL, Hein I, Lacomme C, Birch PRJ, Hussain A, Yun BW, Loake GJ.  2011.  ADS1 encodes a MATE-transporter that negatively regulates plant disease resistance. New Phytologist. 192:471-482.
Gray-Wannell N, Holliman PJ, Greenwell HC, Delbos E, Hillier S.  2020.  Adsorption of phosphate by halloysite (7 angstrom) nanotubes (HNTs). Clay Minerals. 55:184-193.
Hartley IP, Garnett MH, Sommerkorn M, Hopkins DW, Wookey PA.  2013.  The age of CO2 released from soils in contrasting ecosystems during the arctic winter. Soil Biology and Biochemistry. 63:1-4.
Adams JL, Tipping E, Bryant CL, Helliwell RC, Toberman H, Quinton J.  2015.  Aged riverine particulate organic carbon in four UK catchments. Science of the Total Environment. 536:648-654.
Neill AJ, Tetzlaff D, Strachan NJC, Hough RL, Avery LM, Kuppel S, Maneta MP, Soulsby C.  2020.  An agent-based model that simulates the spatio-temporal dynamics of sources and transfer mechanisms contributing faecal indictor organisms to streams. Part 1: Background and model description. Journal of Environmental Management. 270:ArticleNo.110903.
Scalco A, Macdiarmid JI, Craig T, Whybrow S, Horgan GW.  2019.  An agent-based model to simulate meat consumption behaviour of consumers in Britain. Journal of Artificial Societies and Social Simulation. 22:ArticleNo.8.
Marion G, Smith LA, Swain DL, Davidson RS, Hutchings MR.  2008.  Agent-based modelling of foraging behaviour: the impact of spatial heterogeneity on disease risks from faeces in grazing systems. Journal of Agricultural Science. 146:507-520. Abstract
Gotts NM, van Voorn GAK, Polhill JG, de Jong E, Edmonds B, Hofstede GJ, Meyer R.  2019.  Agent-based modelling of socio-ecological systems: Models, projects and ontologies. Ecological Complexity. 40:ArticleNo.100728.
Sutherland LA, Toma L, Barnes AP, Matthews KB, Hopkins J.  2016.  Agri-environmental diversification:linking environmental, forestry and renewable energy engagement on Scottish farms. Journal of Rural Studies. 47:10-20.
Flanigan S, Blackstock KL, Hunter C.  2014.  Agritourism from the perspective of providers and visitors: a typology-based investigation. Tourism Management. 40:405.
Subedi M, Hocking TJ, Fullen MA, McCrea AR, Milne E.  2010.  Agro-environmental project duration and effectiveness in South-East Asia. Outlook on Agriculture. 39(2):107-113.
Harding AE, Rivington M, Mineter MJ, Tett SFB.  2015.  Agro-meteorological indices and climate model uncertainty over the UK. Climatic Change. 128:113-126.
Thirugnanasambandam A, Wright KM, Havis ND, Whisson SC, Newton AC.  2011.  Agrobacterium-mediated transformation of the barley pathogen Ramularia collo-cygni with fluorescent marker tags and live tissue imaging of infection development. Plant Pathology. 60:929-937.
Hawes C, Iannetta PPM, Squire GR.  2021.  Agroecological practices for whole system sustainability. CABI Review, 16..
Chappell A, Scott KP, Griffiths IA, Cowan AA, Hawes C, Wishart J, Martin P.  2017.  The agronomic performance and nutritional content of oat and barley varieties grown in a northern maritime environment depends on variety and growing conditions. Journal of Cereal Science. 74:1-10.
Jouet A, Saunders DGO, McMullan M, Ward B, Furzer O, Jupe F, Cevik V, Hein I, Thilliez GJA, Holub E et al..  In Press.  Albugo candida race diversity, ploidy and host-associated microbes revealed using DNA sequence capture on diseased plants in the field. New Phytologist. Published online..
Jouet A, Saunders DGO, McMullan M, Ward B, Furzer O, Jupe F, Cevik V, Hein I, Thilliez GJA, Holub E et al..  2019.  Albugo candida race diversity, ploidy and host-associated microbes revealed using DNA sequence capture on diseased plants in the field. New Phytologist. 221:1529-1543.
Jia Y, Burbidge C, Sweetman C, Schultz E, Soole E, Jenkins C, Hancock RD, Bruning JB, Ford CM.  2019.  An aldo-keto reductase with 2-keto-l-gulonate reductase activity functions in l-tartaric acid biosynthesis from vitamin C in Vitis vinifera. Journal of Biological Chemistry. 294:15932-15946.
Wells ML, Potin P, Craigie JS, Raven JA, Merchant SS, Helliwell KE, Smith AG, Camire ME, Brawley SH.  2017.  Algae as nutritional and functional food sources: revisiting our understanding. Journal of Applied Phycology. 29:949-982.
Lichner L, Hallett PD, Drongova Z, Czachor H, Kovacik L, Mataix-Solera J, Homolak M.  2013.  Algae influence the hydrophysical parameters of a sandy soil. Catena. 108:58-68.
Glasbey CA, van der Heijden GWAM.  2007.  Alignment and sub-pixel interpolation of images using Fourier methods. Journal of Applied Statistics. 34:217-230. Abstract
Pritchard L, Holden NJ, Bielaszewska M, Karch H, Toth IK.  2012.  Alignment-free design of highly discriminatory diagnostic primer sets for Escherichia coli O104:H4 outbreak strains. PLoS ONE. 7:e34498.
Schlesinger D, Rikanati RD, Volis S, Faigenboim A, Vendramin V, Cattonaro F, Hooper M, Oren E, Taylor M, Sitrit Y et al..  2019.  Alkaloid chemodiversity in Mandragora spp. is associated with loss-of-functionality of MoH6H, a hyoscyamine 6 beta-hydroxylase gene. Plant Science. 283:301-310.
Spies A, Korzun V, Bayles R, Rajaraman J, Himmelback A, Hedley PE, Schweizer P.  2012.  Allele mining in barley genetic resources reveals genes of race-non-specific powdery mildew resistance. Frontiers in Plant Science. 2:113.
Spies A, Korzun V, Bayles R, Rajaraman J, Hedley PE, Schweizer P.  2011.  Allele mining in barley genetic resources reveals genes of race-nonspecific powdery mildew resistance. Frontiers in Plant Science: Plant Nutrition. 2:e113.
Henderson IR, Liu F, Drea SO, Simpson GG, Dean C.  2005.  An allelic series reveals essential roles for FY in plant development in addition to flowering-time control. Development. 132:3597-3607. Abstract
Rodriguez-Gutierrez G, Duthie GG, Wood S, Morrice P, Nicol F, Reid M, Cantlay LL, Kelder T, Horgan GW, Fernandez-Bolanos Guzman J et al..  2012.  Alperujo extract, hydroxytyrosol, and 3,4-dihydroxyphenylglycol are bioavailable and have antioxidant properties in vitamin e-deficient ratsua proteomics and network analysis approach. Molecular Nutrition and Food Research. 56:1131-1147.
Humberto A, Wence H, Cameron C, Black HIB, Meier S, Paolini J, Tapia Y, Cornejo P.  2020.  Alteration of enzyme activities and functional diversity of a soil contaminated with copper and arsenic. Ecotoxicology and Environmental Safety. 192:ArticleNo.110264.
James A, Syed NH, Bordage S, Marshall J, Nimmo GA, Jenkins GI, Herzyk P, Brown JWS, Nimmo HG.  2012.  Alternative splicing mediates responses of the Arabidopsis thaliana circadian clock to temperature changes. The Plant Cell. 24:961-981.
Dantas LB, Calixto CPG, Dourado MM, Carneiro MS, Brown JWS, Hotta CT.  2019.  Alternative splicing of circadian clock genes correlates with temperature in field-grown sugarcane. Frontiers in Plant Science. 10:ArticleNo.1614..
Hannam KD, Neilsen GH, Neilsen D, Midwood AJ, Millard P, Zhang ZL, Thornton B, Steinke D.  2016.  Amino acid composition of grape (Vitis vinifera L.) juice in response to applications of urea to the soil or foliage. American Journal of Enology and Viticulture. 67:47-55.
Bogdanova MI, Wanless S, Harris MP, Lindstrom J, Butler A, Newell MA, Sato K, Watanuki Y, Parsons M, Daunt F.  2014.  Among-year and within-population variation in foraging distribution of European shags Phalacrocorax aristotelis over two decades: implications for marine spatial planning. Biological Conservation. 170:292-299.
Hamilton K, Barfoot J, Crawford KE, Simpson CG, Beaumont PC, Bownes M.  2006.  Amplification of chloroplast DNA using the polymerase chain reaction (PCR): a practical activity for secondary school students. Journal of Biological Education. 40:172-177. Abstract
Abdul-Salam Y, Ehlers MH, Harnmeijer J.  2017.  Anaerobic digestion of feedstock grown on marginal land: break-even electricity prices. Energies. 10:ArticleNo.1416.
Fischer A, Hanley ND.  2007.  Analysing decision behaviour in stated preference surveys: a consumer psychological approach. Ecological Economics. 61(2-3):303-314.
Newton AC, Hackett CA, Swanston JS.  2008.  Analysing the contribution of component cultivars and cultivar combinations to malting quality, yield and disease in complex mixtures. Journal of the Science of Food and Agriculture. 88:2142-2152. Abstract
Ode A, Hagerhall C, Sang N.  2010.  Analysing visual landscape complexity: theory and application. Landscape Research. 35(1):111-131.
Zhang ZL, Hibberd A, Zhou JL.  2008.  Analysis of emerging contaminants in sewage effluent and river water: comparison from spot and passive sampling. Analytica Chimica Acta. 607(1):37-44.
Yong SYC, Choong CY, Cheong PL, Pang SL, Amalina RN, Harikrishna JA, Mat-Isa MN, Hedley PE, Milne L, Vaillancourt RE et al..  2011.  Analysis of ESTs generated from inner bark tissue of an Acacia auriculiformis x Acacia mangium hybrid. Tree Genetics and Genomes. 7:143-152.
Vissat LL, Loreti M, Nenzi L, Hillston J, Marion G.  2019.  Analysis of spatio-temporal properties of stochastic systems using TSTL. ACM Transactions on Modeling and Computer Simulation. 29:ArticleNo.20.
Houston K, Druka A, Bonar N, Macaulay M, Lundqvist U, Franckowiak JD, Morgante M, Stein N, Waugh R.  2012.  Analysis of the barley bract suppression gene Trd1. Theoretical and Applied Genetics. 125:33-45.
Scotti I, Burelli A, Cattonaro F, Chagne D, Fuller J, Hedley PE, Jansson G, Lalanne C, Madur D, Neale D et al..  2005.  Analysis of the distribution of marker classes in a genetic linkage map: A case study in Norway Spruce (Picea.abies Karst). Tree Genetics and Genomes. 1:93-102. Abstract
Debeljak M, Squire GR, Kocev D, Hawes C, Young MW, Dzeroski S.  2011.  Analysis of time series data on agroecosystem vegetation using predictive clustering trees. Ecological Modelling. 222:2524-2529.
Varshney RK, Singh VK, Hickey JM, Xun X, Marshall DF, Wang J, Edwards D, Ribaut JM.  2016.  Analytical and decision support tools for genomics-assisted breeding. Trends in Plant Science. 21:354-363.
De Smet I, White PJ, Bengough AG, Dupuy L, Parizot B, Casimiro I, Heidstra R, Laskowski M, Lepetit M, Hochholdinger F et al..  2012.  Analyzing lateral root development: how to move forward. The Plant Cell. 24:15-20.
Armstrong MR, Whisson SC, Pritchard L, Bos JIB, Venter E, Avrova AO, Rehmany AP, B U, Brooks K, Cherevach I et al..  2005.  An ancestral oomycete locus contains late blight avirulence gene Avr3a, encoding a protein that is recognised in the host cytoplasm. Proceedings of the National Academy of Sciences, USA. 102:7766-7771. Abstract
Mascher M, Muehlbauer GJ, Rokhsar DS, Chapman J, Schmutz J, Barry K, Munoz-Amatriain M, Close TJ, Wise RP, Schulman AH et al..  2013.  Anchoring and ordering NGS contig assemblies by population sequencing (POPSEQ). Plant Journal. 76:718-727.
Sarkies P, Selkirk ME, Jones JT, Blok VC, Boothby T, Goldstein B, Hanelt B, Ardila-Garcia A, Fast NM, Schiffer PM et al..  2015.  Ancient and novel small RNA pathways compensate for the loss of piRNAs in multiple independent nematode lineages. PLoS Biology. 13:e1002061.
Schmidt SD, George TS, Brown LK, Booth A, Wishart J, Hedley PE, Martin P, Russell J, Husted S.  2019.  Ancient barley landraces adapted to marginal soils demonstrate exceptional tolerance to manganese limitation. Annals of Botany.. 123:831-843.
Schornack S, Van Damme M, Bozkurt TO, Cano LM, Smoker M, Thines M, Gaulin E, Kamoun S, Huitema E.  2010.  Ancient class of translocated oomycete effectors targets the host nucleus. Proceedings of the National Academy of Sciences, USA. 107:17421-17426.
Jiang RHY, Tyler BM, Whisson SC, Hardham AR, Govers F.  2006.  Ancient origin of elicitin gene clusters in Phytophthora genomes. Molecular Biology and Evolution. 23:338-351. Abstract
Abarenkov K, Adams RI, Irinyi L, Agan A, Ambrosio E, Antonelli A, Bahram M, Bengtsson-Palme J, Bok G, Cangren P et al..  2016.  Annotating public fungal ITS sequences from the built environment according to the MIxS-Built Environment standard - a report from a May 23-24, 2016 workshop (Gothenburg, Sweden). Mycokeys. 16:1-15.
Novis PM, Whitehead D, Gregorich EG, Hunt JE, Sparrow AD, Hopkins DW, Elberling B, Greenfield LG.  2007.  Annual carbon fixation in terrestrial populations of Nostoc commune (Cyanobacteria) from an Antarctic dry valley is driven by temperature regime. Global Change Biology. 13:1224-1237. Abstract
Gratz SW, Richardson AJ, Duncan G, Holtrop G.  2014.  Annual variation of dietary deoxynivalenol exposure during years of different Fusarium prevalence: a pilot biomonitoring study. Food Additives and Contaminants Part A - Chemistry Analysis Control Exposure and Risk Assessment. 31:1579-1585.
Harrison BD, Robinson DJ.  2005.  Another quarter century of great progress in understanding the biological properties of plant viruses. Annals of Applied Biology. 146:15-37. Abstract
Haugeneder A, Trinkl J, Härtl K, Hoffmann T, Allwood JW, Schwab W.  2018.  Answering biological questions by analysis of the strawberry metabolome. Metabolomics. 14:ArticleNo.145.
Hentley WT, Vanbergen AJ, Beckerman AP, Brien MN, Hails RS, Jones TH, Johnson SN.  2016.  Antagonistic interactions between an invasive alien and a native coccinellid species may promote coexistence. Journal of Animal Ecology. 85:1087-1097.
Vepsalainen S, Koivisto H, Pekkarinen E, Makinen P, Dobson G, McDougall GJ, Stewart D, Haapasalo A, Karjalainen RO, Tanila H et al..  2013.  Anthocyanin-enriched bilberry and blackcurrant extracts modulate amyloid precursor protein processing and alleviate behavioral abnormalities in the APP/PS1 mouse model of Alzheimer's disease. Journal of Nutritional Biochemistry. 24:360-370.
Wright AJ, Soto NA, Baldwin AL, Bateson M, Beale CM, Clark C, Deak T, Edwards EF, Fernandez A, Godinho A et al..  2007.  Anthropogenic noise as a stressor in animals: a multidisciplinary perspective. International Journal of Comparative Psychology. 20:250-273.
Knapp CW, McCluskey SM, Singh BK, Campbell CD, Hudson G, Graham DW.  2011.  Antibiotic resistance gene abundances correlate with metal and geochemical conditions in archived Scottish soils. PLoS ONE. 6:e27300.
Reed MS, Hubacek K, Bonn A, Burt TP, Holden J, Stringer LC, Beharry-Borg N, Buckmaster S, Chapman D, Chapman PJ et al..  2013.  Anticipating and managing future trade-offs and complementarities between ecosystem services. Ecology and Society, 18, 5..
Wattegedera S, Rocchi M, Sales J, Howard CJ, Hope JC, Entrican G.  2008.  Antigen-specific peripheral immune responses are unaltered during normal pregnancy in sheep. Journal of Reproductive Immunology. 77:171-178. Abstract
Beattie JH, Gordon MJ, Rucklidge GJ, Reid MD, Duncan GJ, Horgan GW, Cho YE, Kwun IS.  2008.  Aorta protein networks in marginal and acute zinc deficiency. Proteomics. 8:2126-2135. Abstract
Patil V, McDermott HI, McAllister T, Cummins M, Silva JC, Mollison E, Meikle R, Morris J, Hedley PE, Waugh R et al..  2019.  APETALA2 control of barley internode elongation. Development. 146:ArticleNo.dev170373.
Shoesmith JR, Solomon CU, Yang X, Wilkinson LG, Sheldrick S, van Eijden E, Couwenberg S, Pugh LM, Eskan M, Stephens J et al..  2021.  APETALA2 functions as a temporal factor together with BLADE-ON-PETIOLE2 and MADS29 to control flower and grain development in barley. Development. 148:ArticleNo.dev194894.
Neacsu M, Fyfe C, Horgan G, Johnstone AM.  2014.  Appetite control and biomarkers of satiety with vegetarian (soy) and meat-based high-protein diets for weight loss in obese men: a randomized crossover trial. American Journal of Clinical Nutrition. 100:548-558.
Troldborg M, Aalders I, Towers W, Hallett PD, McKenzie BM, Bengough AG, Lilly A, Ball BC, Hough RL.  2013.  Application of Bayesian Belief Networks to quantify and map areas at risk to soil threats: using soil compaction as an example. Soil Tillage and Research. 132:56-68.
Allwood JW, Woznicki TL, Xu Y, Foito A, Aaby K, Sungurtas J, Freitag S, Goodacre R, Stewart D, Rember SF et al..  2019.  Application of HPLC-PDA-MS metabolite profiling to investigate the effect of growth temperature and day length on blackcurrant fruit. Metabolomics. 15:ArticleNo.12.
Richens IF, Houdmont J, Wapenaar W, Shortall O, Kaler J, O'Connor H, Brennan ML.  2018.  Application of multiple behaviour change models to identify determinants of farmers' biosecurity attitudes and behaviour. Preventive Veterinary Medicine. 115:61-74.
Jones HG, Hillis RM, Gordon SL, Brennan RM.  2013.  An approach to the determination of winter chill requirements for different Ribes cultivars. Plant Biology. 15:18-27.
Shand CA, Balsam M, Hillier SJ, Hudson G, Newman G, Arthur JR, Nicol F.  2010.  Aqua regia extractable selenium contents of some Scottish topsoils measured by ICP-MS and the relationship with mineral and organic components. Journal of the Science of Food and Agriculture. 90(6):972-980.
Demars BOL, Wiegleb G, Harper DM, Broring U, Brux H, Herr W.  2014.  Aquatic plant dynamics in lowland river networks: connectivity, management and climate change. Water. 6:868-911.
Latijnhouwers M, Hawes C, Carvalho C, Oparka K, Gillingham AK, Boevink P.  2005.  An Arabidopsis GRIP domain protein locates to the trans-Golgi and binds the small GTPase ARL1. Plant Journal. 44:459-470. Abstract
Hawes C, Squire GR, Hallett PD, Watson CA, Young MW.  2010.  Arable plant communities as indicators of farming practice. Agriculture, Ecosystems and Environment. 138:17-26.
Jackson-Blake LA, Sample JE, Wade AJ, Helliwell RC, Skeffington RA.  2017.  Are our dynamic water quality models too complex? A comparison of a new parsimonious phosphorus model, SimplyP, and INCA-P Water Resources Research. 53:5382-5399.
Urama KC, Hodge ID.  2006.  Are stated preferences convergent with revealed preferences? Empirical evidence from Nigeria Ecological Economics. 59(1):24-37.
Koper JEB, Kortekaas M, Loonen LMP, Huang Z, Wells JM, Gill CIR, Pourshahidi LK, McDougall G, Rowland I, Pereira-Caro G et al..  2020.  Aryl hydrocarbon receptor activation during in vitro and in vivo digestion of raw and cooked broccoli (brassica oleracea var.Italica). Food and Function. 11:4026-4037.
Hancock RD, Chudek S, Walker PG, Pont SDA, Viola R.  2008.  Ascorbic acid conjugates isolated from the phloem of Cucurbitaceae. Phytochemistry. 69:1850-1858. Abstract
Walker PG, Viola R, Woodhead M, Jorgensen L, Gordon SL, Brennan RM, Hancock RD.  2010.  Ascorbic acid content of blackcurrant fruit is influenced by both genetic and enviromental factors. Functional Plant Science and Biotechnology. 4:40-52.
Mitchell RJ, Beaton JK, Bellamy PE, Broome A, Chetcuti J, Eaton S, Ellis CJ, Gimona A, Harmer R, Hester AJ et al..  2014.  Ash dieback in the UK: a review of the ecological and conservation implications and potential management options. Biological Conservation. 175:95-109.
Arpaia S, Messean A, Birch NA, Hokannen H, Hartel S, Van Loon J, Lovei G, Park J, Spreafico H, Squire GR et al..  2014.  Assessing and monitoring impacts of genetically modified plants on agro-ecosystems: the approach of the AMIGA project. Entomologia. 2:79-86.
Navajas EA, Glasbey CA, Fisher AV, Ross DW, Hyslop JJ, Richardson RI, Simm G, Roehe R.  2010.  Assessing beef carcass tissue weights using computed tomography spirals of primal cuts. Meat Science. 84:30-38.
Ramezanian A, Dahlin AS, Campbell CD, Hillier S, Oborn I.  2015.  Assessing biogas digestate, pot ale, wood ash and rockdust as soil amendments: effects on soil chemistry and microbial community composition. Acta Agriculturae Scandinavica, Section B: Soil and Plant Science.
Minh ND, Hough RL, Thuy LT, Nyberg Y, Mai LB, Vinh NC, Khai NM, Oborn I.  2012.  Assessing dietary exposure to cadmium in a metal recycling community in Vietnam: age and gender aspects. Science of the Total Environment. 416:164-171.
Wemelsfelder F, Hunter AE, Paul ES, Lawrence AB.  2012.  Assessing pig body language: agreement and consistency between pig farmers, veterinarians, and animal activists. Journal of Animal Science. 90:3652-3665.
Andrist Rangel Y, Hillier S, Oborn I, Lilly A, Towers W, Edwards AC, Paterson E.  2010.  Assessing potassium reserves in northern temperate grassland soils: A perspective based on quantitative mineralogical analysis and aqua-regia extractable potassium. Geoderma. 158(3-4):303-314.
Helliwell RC, Wright RF, Jackson-Blake LA, Ferrier RC, Aherne J, Cosby BJL, Evans CD, Forsius M, Hruska J, Jenkins A et al..  2014.  Assessing recovery from acidification of European surface waters in the year 2010: evaluation of projections made with the MAGIC model in 1995. Environmental Science and Technology. 48:13280-13288.
O'Dochartaigh BEO, MacDonald AM, Griffiths KJ, Lilly A, DeGroote J, Chilton PJ, Hughes AG.  2007.  Assessing the effectiveness of Scotland's groundwater nitrate monitoring network. Quarterly Journal of Engineering Geology and Hydrogeology. 40(4):393-406.
Travis AJ, Norton GJ, Datta S, Sarma R, Dasgupta T, Savio FL, Macaulay M, Hedley PE, McNally KL, Sumon MH et al..  2015.  Assessing the genetic diversity of rice originating from Bangladesh, Assam and West Bengal. Rice. 8
Lewis TD, Rowan JS, Hawes C, McKenzie BM.  2013.  Assessing the importance of soil erosion to the seedbank biodiversity in arable agro-ecosystems. Progress in Physical Geography. 37:622-641.
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Sarkki S, Ficko A, Wielgolaski FE, Abraham EM, Bratanova-Doncheva S, Grunewald K, Hofgaard A, Holtmeier FK, Kyriazopoulos AP, Broll G et al..  2017.  Assessing the resilient provision of ecosystem services by social-ecological systems: introduction and theory. Climate Research. 73:7-15.
Clark JM, Gallego-Sala AV, Allott TEH, Chapman SJ, Farewell T, Freeman C, House JI, Orr HG, Prentice IC, Smith P.  2010.  Assessing the vulnerability of blanket peat to climate change using an ensemble of statistical bioclimatic envelope models. Climate Research. 45:131-150.
Smart SM, Jarvis SG, Mizunuma T, Herrero-Jauregui C, Fang Z, Butler A, Alison J, Wilson M, Marrs RH.  2019.  Assessment of a large number of empirical plant species niche models by elicitation of knowledge from two national experts. Ecology and Evolution. 9:12858-12868.
Bartley K, Huntley JF, Wright HW, Nath M, Nisbet AJ.  2012.  Assessment of cathepsin D and L-like proteinases of poultry red mite, Dermanyssus gallinae (De Geer), as potential vaccine antigens. Parasitology. 139:755-765.
Zak D, Stutter MI, Jensen HS, Egemose S, Carstensen MV, Audet J, Strand JA, Feuerbach P, Hoffmann CC, Christen B et al..  2019.  An assessment of the multifunctionality of integrated buffer zones in Northwestern Europe. Journal of Environmental Quality. 48:362-375.
Donnelly D, Helliwell R, May L, McCreadie B.  2020.  An assessment of the performance of the PLUS+ tool in supporting the evaluation of Water framework Directive compliance in Scottish standing waters. International Journal of Environmental Research and Public Health. 17:ArticleNo.391.
Sam L, Craig T, Horgan GW, Macdiarmid JI.  2019.  Association between hours worked in paid employment and diet quality, frequency of eating out and consuming takeaways in the UK. Public Health Nutrition. 22:3368-3376.
MacKenzie K, Hackett CA.  2012.  Association mapping in a simulated barley population. Euphytica. 183:337-347.
Looseley ME, Bayer M, Bull H, Ramsay L, Thomas W, Booth A, De la Fuente Canto C, Morris J, Hedley PE, Russell J.  2017.  Association mapping of diastatic power in UK winter and spring barley by exome sequencing of phenotypically contrasting variety sets. Frontiers in Plant Science. 8:ArticleNo.1566.
Herfindal I, Tremblay JP, Hester AJ, Lande US, Wam HK.  2015.  Associational relationships at multiple spatial scales affect forest damage by moose. Forest Ecology and Management. 348:97-107.
Caron-Lormier G, Humphry RW, Bohan DA, Hawes C, Thorbek P.  2008.  Asynchronous and synchronous updating in individual-based models. Ecological Modelling. 212:522-527. Abstract
Wilcox KR, Tredennick AT, Koerner SE, Grman E, Hallett LM, Avolio ML, La Pierre KJ, Houseman GR, Isbell F, Johnson DS et al..  2017.  Asynchrony among local communities stabilises ecosystem function of metacommunities. Ecology Letters. 20:1534-1545.
Druka A, Muehlbauer G, Druka I, Caldo R, Baumann U, Rostoks N, Schreiber A, Wise R, Close T, Kleinhofs A et al..  2006.  An atlas of gene expression from seed to seed through barley development. Functional & Integrative Genomics. 6:202-211. Abstract
Tipping E, Benham S, Boyle JF, Crow P, Davies J, Fischer U, Guyatt H, Helliwell RC, Jackson-Blake L, Lawlor AJ et al..  2014.  Atmospheric deposition of phosphorus to land and freshwater. Environmental Science: Processes and Impacts. 16:1608-1617.
Horgan GW, Song Y, Glasbey CA, van der Heijden GWAM, Polder G, Dieleman JA, Bink MCAM, van Eeuwijk FA.  2015.  Automated estimation of leaf area development in sweet pepper plants from image analysis. Functional Plant Biology. 42:486-492.
Gomez LD, Whitehead C, Barakate A, Halpin C, McQueen-Mason SJ.  2010.  Automated saccharification assay for determination of digestibility in plant materials. Biotechnology for Biofuels. 3:-23.
Song Y, Glasbey CA, Horgan GW, Polder G, Dieleman JA, van der Heijden GWAM.  2014.  Automatic fruit recognition and counting from multiple images. Biosystems Engineering. 118:203-215.
Neacsu M, McMonagle J, Fletcher RJ, Hulshof T, Duncan SH, Scobbie L, Duncan GJ, Cantlay L, Horgan G, de Roos B et al..  2017.  Availability and dose response of phytophenols from a wheat bran rich cereal product in healthy human volunteers. Molecular Nutrition and Food Research. 61:ArticleNo.UNSP1600202.
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Dudnik A, Almeida AF, Andrade R, Avila B, Banados P, Bassard JE, Benkoulouche M, Bott M, Braga A, Breitel D et al..  2018.  BacHBerry: BACterial Hosts for production of Bioactive phenolics from bERRY fruits. Phytochemistry Reviews. 17:291-326.
Rossez Y, Wolfson EB, Holmes A, Gally DL, Holden NJ.  2015.  Bacterial flagella: twist and stick, or dodge across the Kingdoms. PLoS Pathogens.. 11:e1004483.
Mao X, Hu F, Griffiths BS, Li H.  2006.  Bacterial-feeding nematodes enhance root growth of tomato seedlings. Soil Biology & Biochemistry. 38:1615-1622. Abstract
Barakate A, Orr J, Schreiber M, Colas I, Lewandowska D, McCallum N, Macaulay M, Morris J, Arrieta M, Hedley PE et al..  2021.  Barley anther and meiocyte transcriptome dynamics in meiotic prophase I. Frontiers in Plant Science. 11:ArticleNo.619404.
Schreiber M, Wright F, MacKenzie K, Hedley PE, Schwerdt JG, Little A, Burton RA, Fincher GB, Marshall D, Waugh R et al..  2014.  The barley genome sequence assembly reveals three additional members of the CsIF (1,3;1,4) - beta-glucan synthase gene family. PLoS ONE. 9:e90888.
Garcia-Gimenez G, Russell J, Aubert MK, Fincher GB, Burton RA, Waugh R, Tucker MR, Houston K.  2019.  Barley grain (1,3;1,4)-beta-glucan content: effects of transcript and sequence variation in genes encoding the corresponding synthase and endohydrolase enzymes. Scientific Reports. 9:ArticleNo.17250.
Mendiondo GM, Medhurst A, van Roermund CW, Zhang XB, Devonshire J, Scholefield D, Fernandez J, Axcell B, Ramsay L, Waterham HR et al..  2014.  Barley has two peroxisomal ABC transporters with multiple functions in beta-oxidation. Journal of Experimental Botany. 65:4833-4847.
Escudero-Martinez CM, Morris JA, Hedley PE, Bos JIB.  2017.  Barley transcriptome analyses upon interaction with different aphid species identify thionins contributing to resistance. Plant Cell and Environment. 40:2628-2643.
Mascher M, Richmond TA, Gerhardt DJ, Himmelbach A, Clissold L, Sampath D, Ayling S, Steuernagel B, Pfeifer M, D'Ascenzo M et al..  2013.  Barley whole exome capture: a tool for genomic research in the genus Hordeum and beyond. Plant Journal. 76:494-505.
Swanston JS, Newton AC, Hoad SP, Spoor W.  2005.  Barleys grown as cultivar mixtures compared with blends made before and after malting, for effects on malting performance. Journal of the Institute of Brewing. 111:144-152. Abstract
Rapazote-Flores P, Bayer M, Milne L, Mayer CD, Fuller J, Guo W, Hedley PE, Morris J, Halpin C, Kam J et al..  2019.  BaRTv1.0: a barley reference transcript dataset for quantitative measurement barley transcriptomes using RNA-seq. BMC Genomics. 20:ArticleNo.968.
Eichmann R, Bischof M, Weis C, Shaw J, Lacomme C, Schweizer P, Duchkov D, Hensel G, Kumlehn J, H R.  2010.  BAX INHIBITOR-1 is required for full susceptibility of barley to powdery mildew. Molecular Plant-Microbe Interactions. 23:1217-1227.
Lawson DJ, Holtrop G, Flint H.  2011.  Bayesian analysis of non-linear differential equation models with application to a gut microbial ecosystem. Biometrical Journal. 53:543-556.
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Loe LE, Hansen BB, Stien A, Albon SD, Bischof R, Carlsson A, Irvine RJ, Meland M, Rivrud IM, Ropstad E et al..  2016.  Behavioral buffering of extreme weather events in a high- Arctic herbivore. Ecosphere. 7:1-13.
Loe LE, Hansen BB, Stien A, Albon SD, Bischof R, Carlsson A, Irvine RJ, Meland M, Rivrud IM, Ropstad E et al..  2016.  Behavioral buffering of extreme weather events in a high- Arctic herbivore. Ecosphere. 7:ArticleNo.e01374..
Horgan GW.  2011.  The behaviour of a neutral model of weight regulated only by body mass. Journal of Theoretical Biology. 270:1-6.
Johnson SN, Hallett PD, Gillespie TL, Halpin C.  2010.  Below-ground herbivory and root toughness: a potential model system using lignin-modified tobacco. Physiological Entomology. 35:186-191. Abstract
Biurrun I, Pielech R, Dembicz I, Gillet F, Kozub L, Marcenò C, Reitalu T, van Meerbeek K, Guarino R, Chytrý M et al..  2021.  Benchmarking plant diversity of Palaearctic grasslands and other open habitats. Journal of Vegetation Science. 32:ArticleNo.e13050.
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Hérivaux C, Rey-Valette H, Rulleau B, Agenais AL, Grisel M, Kuhfuss L, Maton L, Vinchon C.  2018.  Benefits of adapting to sea level rise: the importance of ecosystem services in the French Mediterranean sandy coastline. Regional Environmental Change. 18:1815-1828.
Hukkanen AT, Kokko HI, Buchala AJ, McDougall GJ, Stewart D, K SO, Karjalainen RO.  2007.  Benzothiadiazole induces the accumulation of phenolics and improves resistance to powdery mildew in strawberries. Journal of Agricultural and Food Chemistry. 55:1862-1870. Abstract
Kpanzou TA, Gamado KM, Hounnon H.  2019.  A Beran-inspired estimator for the Weibull-type tail coefficient. Journal of Statistical Theory and Practice. 13:ArticleNo.UNSP20.
Bennett AE, Preedy K, Golubski A, Umbanhower A, Borrett SR, Byrne L, Apostol K, Bever JD, Biederman L, Classen AT et al..  2019.  Beyond the black box: promoting mathematical collaborations for elucidating interactions in soil ecology. Ecosphere. 10:ArticleNo.e02799.
Hannam KD, Kehila D, Millard P, Midwood AJ, Neilsen D, Neilsen GH, Forge TA, Nichol C, Jones MD.  2016.  Bicarbonates in irrigation water contribute to carbonate formation and CO2 production in orchard soils under drip irrigation. Geoderma. 266:120-126.
Sayanova O, Haslam R, Guschina I, Lloyd D, Christie WW, Harwood JL, Napier JA.  2007.  A bifunctional D12, D15-desaturase from Acanthamoeba castellanii directs the synthesis of highly unusual n-1 series unsaturated fatty acids. Journal of Biological Chemistry. 281:36533-36541. Abstract
White PJ, Broadley MR, Hammond JP, Ramsay G, Subramanian NK, Thompson JA, Wright GM.  2012.  Bio-fortification of potato tubers using foliar zinc-fertiliser. Journal of Horticultural Science and Biotechnology. 87:123-129.
Whitson J, McDougall GJ, Ross HA, Lund VA, Hamilton CA, Dominiczak AF, Stewart D.  2010.  Bioactive berry components: Potential modulators of health benefits. Functional Plant Science and Biotechnology. 4:34-38.
Seim GL, Ahn CI, Bodis MS, Luwedde F, Miller DD, Hillier S, Tako E, Glahn RP, Young SL.  2013.  Bioavailability of iron in geophagic earths and clay minerals, and their effect on dietary iron absorption using an in vitro digestion/Caco-2 cell model. Food and Function. 4:1263-1270.
Bowen SR, Gregorich EG, Hopkins DW.  2009.  Biochemical properties and biodegradation of dissolved organic matter from soils. Biology and Fertility of Soils. 45:733-742. Abstract
Ali S, Khan SJ, Allan R, Hashmi I.  2020.  Biocidal potential of electrochemically activated solutions (ECAS) against Aeromonas sp. Enterobacter sp. and Escherichia coli in tap water. Journal of Water Process Engineering. 36:ArticleNo.101328.
Gallego-Sala AV, Clark JM, House JI, Orr HG, Prentice IC, Smith P, Farewell T, Chapman SJ.  2010.  Bioclimatic envelope model of climate change impacts on blanket peatland distribution in Great Britain. Climate Research. 45:151-162.
Grüning B, Dale R, Sjödin A, Chapman BA, Rowe J, Tomkins-Tinch CH, Valieris R, Caprez A, Batut B, Haudgaard M et al..  2018.  Bioconda: A sustainable and comprehensive software distribution for the life sciences. Nature Methods. 15:475-476.
Hough RL.  2014.  Biodiversity and human health: evidence for casuality? Biodiversity and Conservation. 23:267-288.
Britton AJ, Beale CM, Towers W, Hewison RL.  2009.  Biodiversity gains and losses: evidence for homogenisation of Scottish alpine vegetation. Biological Conservation. 142:1728-1739.
Lemaire B, Chimphango S, Stirton C, Rafundeen S, Honnay O, Smets E, Chen WM, Sprent JI, James EK, Muasya AM.  2016.  Biogeographical patterns of legume-nodulating Burkholderia spp.: from African Fynbos to continental scales. Applied and Environmental Microbiology. 82:5099-5115.
Botnen SS, Davey ML, Aas AB, Carlsen T, Thoen E, Heegaard E, Vik U, Dresch P, Mundra S, Peintner U et al..  2019.  Biogeography of plant root-associated fungal communities in the North Atlantic region mirrors climatic variability. Journal of Biogeography. 46:1532-1546.
Hallett PD, Lichner L, Cerda A.  2010.  Biohydrology: coupling biology and soil hydrology from pores to landscapes preface. Ecohydrology. 3:379-381.
Griffiths BS, Hallett PD, Kuan HL, Pitkin Y, Aitken MN.  2005.  Biological and physical resilience of soil amended with heavy metal-contaminated sewage sludge. European Journal of Soil Science. 56:197-206. Abstract
Kuan HL, Hallett PD, Griffiths BS, Gregory AS, Watts CW, Whitmore AP.  2007.  The biological and physical stability and resilience of a selection of Scottish soils to stresses. European Journal of Soil Science. 58:811-821. Abstract
Hopkins M, Finlayson G, Duarte C, Gibbons C, Johnstone AM, Whybrow S, Horgan GW, Blundell JE, Stubbs RJ.  2019.  Biological and psychological mediators of the relationships between fat mass, fat-free mass and energy intake. International Journal of Obesity. 43:233-242.
Woodward FI, Bardgett RD, Raven JA, Hetherington AM.  2009.  Biological approaches to global environmental change: mitigation and remediation. Current Biology. 19:R615-R623.
Subbarao GV, Sahrawat KL, Nakahara K, Ishikawa T, Rao GP, Hash CT, George TS, Kishii M, Rao PS, Nardi P et al..  2012.  Biological nitrification inhibition (BNI) - a novel strategy to regulate nitrification in agricultural systems. Advances in Agronomy. 114:249-302.
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Hetherington AM, Raven JA.  2005.  The biology of carbon dioxide. Current Biology. 15:406-410.
Holland JE, Hayes RC, Refshauge G, Poile J, Newell MT, Conyers MK.  2019.  Biomass, feed quality, mineral concentration and grain yield responses to potassium fertiliser of dual-purpose crops. New Zealand Journal of Agricultural Research. 62:476-494.
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The James Hutton Research Institute is the result of the merger in April 2011 of MLURI and SCRI. This merger formed a new powerhouse for research into food, land use, and climate change.