Publications list
Filters: First Letter Of Last Name is J [Clear All Filters]
Differential nucleosome occupancy modulates alternative splicing in Arabidopsis thaliana. New Phytologist. 229:1937-1945.
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2021.
A conceptual framework for expert opinions in forensic geoscience. Science and Justice.
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2012.
How well can we model stream phosphorus concentrations in agricultural catchments? Environmental Modelling and Software. 64:31-46.
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2015.
Controls on soil solution nitrogen along an altitudinal gradient in the Scottish uplands. Science of the Total Environment. 431:100-108.
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2012.
The INtegrated CAtchment model of phosphorus dynamics (INCA-P): Description and demonstration of new model structure and equations. Environmental Modelling and Software. 83:356-386.
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2016.
Are our dynamic water quality models too complex? A comparison of a new parsimonious phosphorus model, SimplyP, and INCA-P Water Resources Research. 53:5382-5399.
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2017.
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2015.
Tensile fracture properties of seven tropical grass species at different phenological stages. Grass and Forage Science. 66:551-559.
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2011.
Gradients in fracture force and grazing resistance across canopy layers in seven tropical grass species. Grass and Forage Science. 68:278-287.
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2013.
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2016.
Unearthing the picturesque: the validity of the preference matrix as a measure of landscape aesthetics. Landscape and Urban Planning. 124:1-13.
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2014.
A view not to be missed: Salient scene content interferes with cognitive restoration. PLoS ONE. 12:e0169997.
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2017.
NAM-1gene polymorphism and grain protein content in Hordeum. Journal of Plant Physiology. 167:497-501.
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2010.
The heterogeneity, distribution and environmental associations of Borrelia burgdorferi sensu lato, the agent of Lyme borreliosis, in Scotland. Frontiers in Public Health, 2, Article 129. 2
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2014.
Alternative splicing mediates responses of the Arabidopsis thaliana circadian clock to temperature changes. The Plant Cell. 24:961-981.
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2012.
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2013.
How does temperature affect splicing events? Isoform switching of splicing factors regulates splicing of LATE ELONGATED HYPOCOTYL (LHY) Plant Cell and Environment.. 41:1539-1550.
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2018.
Guidelines on the use of structure-from-motion photogrammetry in geomorphic research. Earth Surface Processes and Landforms. 44:2081-2084.
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2019.
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2012.
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2011.
Bioaccumulation of persistent organic pollutants in the deepest ocean fauna. Nature Ecology and Evolution. 1:ArticleNo.0051.
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2017.
Evaluating the performance of horizontal sub-surface flow constructed wetlands: a case study from southern India. Ecological Engineering Journal. 162:ArticleNo.106170.
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2021.
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2015.
Plant immunity in plant-aphid interactions. Frontiers in Plant Science. 5
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2014.
(Poly)phenol metabolites from Arbutus unedo leaves protect yeast from oxidative injury by activation of antioxidant and protein clearance pathways. Journal of Functional Foods. 32:333-346.
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2017.
A transcript and metabolite atlas of blackcurrant fruit development highlights hormonal regulation and reveals the role of key transcription factors. Frontiers in Plant Science. 9:ArticleNo.1235.
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2018.
Regional scale gradients of climate and nitrogen deposition drive variation in ectomycorrhizal fungal communities associated with native Scots pine. Global Change Biology. 19:1688-1696.
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2013.
Strong altitudinal partitioning in the distributions of ectomycorrhizal fungi along a short (300 m) elevation gradient. New Phytologist. 206:1145-1155.
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2015.
Rainfall and temperature effects on fruit body production by stipitate hydnoid fungi in Inverey Wood, Scotland. Fungal Ecology. 27:137-140.
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2017.
Red deer (Cervus elaphus) vigilance behaviour differs according to human disturbance type and habitat. Wildlife Biology. 14:81-91.
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2008.
Effects of human disturbance on the diet composition of wild red deer Cervus elaphus. European Journal of Wildlife Research. 57:939-948.
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2011.
Global challenges facing plant pathology: multidisciplinary approaches to meet the food security and environmental challenges in the mid-21st century. CABI Agriculture and Bioscience. 2:ArticleNo.20.
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2021.
A global database for metacommunity ecology, integrating species, traits, environment and space. Scientific Data. 7:1-15.
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2020.
Spatial analysis of ice phenology trends across the Laurentian Great Lakes region during a recent warming period. Limnology and Oceanography. 52:2013-2026.
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2007.
Quantitative bulk and single-particle mineralogy of a thick Chinese loess-paleosol section: implications for loess provenance and weathering. Quaternary Science Reviews. 27(11-12):1271-1287.
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2008.
Changes in mineralogy of loess-paleosol sections across the Chinese Loess Plateau. Quaternary Research. 75:245-255.
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2011.
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2016.
Development and validation of methodology for estimating potato canopy structure for field crop phenotyping and improved breeding. Frontiers in Plant Science. 12:ArticleNo.612843.
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2021.
An aldo-keto reductase with 2-keto-l-gulonate reductase activity functions in l-tartaric acid biosynthesis from vitamin C in Vitis vinifera. Journal of Biological Chemistry. 294:15932-15946.
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2019.
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2021.
A robust statistical method for association-based eQTL analysis. PLoS ONE. 6:e23192.
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2011.
Methods for evaluating gene expression from Affymetrix microarray datasets. BMC Bioinformatics. 9:-284. Abstract
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2008.
Ancient origin of elicitin gene clusters in Phytophthora genomes. Molecular Biology and Evolution. 23:338-351. Abstract
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2006.
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2021.
Potato late blight field resistance from QTL dPI09c is conferred by the NB-LRR gene R8. Journal of Experimental Botany. 69:1545-1555.
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2018.
Soil organic matter decomposition and carbon sequestration in temperate coniferous forest soils affected by soluble and insoluble spruce needle fractions. Soil Biology and Biochemistry. 138:ArticleNo.107595.
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2019.
Impact of plant species and atmospheric CO2 concentration on rhizodeposition and soil microbial activity and community composition. Journal of Plant Nutrition and Soil Science. 183:327-337.
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2020.
A prototype cloud-based reproducible data analysis and visualization platform for outputs of agent-based models. Environmental Modelling and Software. 96:172-180.
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2017.
Shaping an optimal soil by root-soil interaction. Trends in Plant Science. 22:823-829.
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2017.
The tagged microarray marker (TAM) method for high-throughput detection of single nucleotide and indel polymorphisms. Nature Protocols. 2:168-177.
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2007.
Insertional polymorphism and antiquity of PDR1 retrotransposon insertions in Pisum species. Genetics. 171:741-752. Abstract
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2005.
Gene-based sequence diversity analysis of field pea (Pisum). Genetics. 177:2263-2275. Abstract
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2007.
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2010.
Genetic diversity in European Pisum germplasm collections. Theoretical and Applied Genetics. 125:367-380.
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2012.
mRNA levels of placental iron and zinc transporter genes are upregulated in Gambian women with low iron and zinc status. Journal of Nutrition. 147:1401-1409.
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2017.
Effects of soil conditions and drought on egg hatching and larval survival of the clover root weevil (Sitona lepidus). Applied Soil Ecology. 44:75-79.
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2010.
Effects of CO2 on the searching behaviour of the root-feeding clover weevil Sitona lepidus (Coleoptera: Curculionidae). Bulletin of Entomological Research. 96:361-366. Abstract
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2006.
Editorial: Crop traits for defense against pests and disease: durability, breakdown and future prospects. Frontiers in Plant Science. 8:ArticleNo.209.
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2017.
Drought alters carbon fluxes in alpine snowbed ecosystems through contrasting impacts on graminoids and forbs. New Phytologist. 190:740-749.
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2011.
Plant genotypic diversity does not beget root-fungal species diversity. Plant and Soil. 336(1-2):107-111.
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2010.
Interplant signalling through hyphal networks. New Phytologist. 205:1448-1453.
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2015.
Attractive properties of an isoflavonoid found in white clover root nodules on the clover root weevil. Journal of Chemical Ecology. 31:2223-2229. Abstract
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2005.
Varietal susceptibility of potatoes to wireworm herbivory. Agricultural and Forest Entomology. 10:167-174. Abstract
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2008.
A framework for valuing the health benefits of improved bathing water quality in the River Irvine catchment. Journal of Environmental Management.. 87(4):633-638.
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2008.
Below-ground herbivory and root toughness: a potential model system using lignin-modified tobacco. Physiological Entomology. 35:186-191. Abstract
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2010.
Protected raspberry production alters aphid-plant interactions but not aphid population size. Agricultural and Forest Entomology. 14:217-224.
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2012.
Chemically mediated host-plant location and selection by root-feeding insects. Physiological Entomology. 31:1-13. Abstract
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2006.
Reappraising the role of plant nutrients as mediators of interactions between root- and foliar-feeding insects. Functional Ecology. 23:699-706. Abstract
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2009.
New frontiers in belowground ecology for plant protection from root-feeding insects. Applied Soil Ecology. 108:96-107.
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2016.
Aboveground-belowground herbivore interactions: a meta-analysis. Ecology. 93:2208-2215.
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2012.
Protected raspberry production accelerates onset of oviposition by vine weevils (Otiorhynchus sulcatus). Agricultural and Forest Entomology. 12:277-283.
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2010.
Plant-mediated effects of soil invertebrates and summer drought on above-ground multitrophic interactions. Journal of Ecology. 99:57-65.
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2011.
Non-invasive techniques for investigating and modelling root-feeding insects in managed and natural systems. Agricultural and Forest Entomology. 9:39-46.
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2007.
Elevated CO2 and aboveground-belowground herbivory by the clover root weevil. Oecologia. 162:209-216.
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2010.
The 'mother knows best' principle: should soil insects be included in the preference-performance debate? Ecological Entomology. 31:395-401. Abstract
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2006.
Downstairs drivers - root herbivores shape communities of above-ground herbivores and natural enemies via changes in plant nutrients. Journal of Animal Ecology. 82:1021-1030.
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2013.
Elevated atmospheric carbon dioxide impairs the performance of root-feeding vine weevils by modifying root growth and secondary metabolites. Global Change Biology. 17:688-695.
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2011.
Egg hatching and survival time of soil-dwelling insect larvae: a partial differential equation model and experimental validation. Ecological Modelling. 202:493-502. Abstract
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2007.
Having it all - historical energy intakes do not generate the anticipated trade-offs in fecundity. Proceedings of the Royal Society of London, B. 273(1592):1369-1374.
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2006.
Associations between basal metabolic rate and reproductive performance in C57BL/6J mice. Journal of Experimental Biology. 210(1):65-74.
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2007.
Bursaphelenchus xylophilus: opportunities in comparative genomics and molecular host-parasite interactions (Review). Molecular Plant Pathology. 9:357-368. Abstract
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2008.
Elevating crop disease resistance with cloned genes. Philosophical Transactions of the Royal Society B, Biological Sciences.. 369:ArticleNo20130087.
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2014.
How do rootstocks control shoot water relations? New Phytologist. 194:301-303.
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2012.
Concentration-dependent NH3 deposition processes for mixed moorland semi-natural vegetation. Atmospheric Environment. 41:2049-2060. Abstract
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2007.
Thermal infrared imaging of crop canopies for the remote diagnosis and quantification of plant responses to water stress in the field.. Functional Plant Biology. 36:978-989.
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2009.
Top 10 plant parasitic nematodes in molecular plant pathology. Molecular Plant Pathology. 14:946-961.
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2013.
Remote sensing of plant stresses and its use in irrigation management. Acta Horticulturae. 1038:239-247.
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2014.
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2007.
RNA sequence analysis of diseased groundnut (Arachis hypogaea) reveals the full genome of groundnut rosette assistor virus (GRAV). Virus Research. 277:ArticleNo.197837.
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2020.
Can water droplets on leaves cause leaft scorch? New Phytologist. 185:865-867.
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2010.
An approach to the determination of winter chill requirements for different Ribes cultivars. Plant Biology. 15:18-27.
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2013.
The effect of landscape heterogeneity and host movement on a tick-borne pathogen. Theoretical Ecology. 4:435-448.
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2011.
The use of indirect or proxy markers in plant physiology. Plant Cell and Environment.
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2014.
Monitoring plant and soil water status: established and novel methods revisited and their relevance to studies of drought tolerance. Journal of Experimental Botany. 58:119-130. Abstract
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2007.
A practical method using a network of fixed infrared sensors for estimating crop canopy conductance and evaporation rate. Biosystems Engineering. 165:59-69.
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2018.
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2006.
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2013.
Recently identified microbial guild mediates soil N2O sink capacity. Nature Climate Change. 4:801-805.
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2014.
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2005.
Short-term flux chamber experiment to quantify the deposition of gaseous 15N-NH3 to Calluna vulgaris. Agricultural and Forest Meteorology. 148:893-901. Abstract
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2008.
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2019.
What plant is that? Tests of automated image recognition apps for plant identification on plants from the British flora AOB Plants. 12:ArticleNo.plaa052.
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2020.
Mutation of Arabidopsis spliceosomal timekeeper locus 1 causes circadian clock defects. The Plant Cell. 24:4066-4082.
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2012.
Concentration-dependent NH3 deposition processes for stomatal and non-stomatal moorland species. Atmospheric Environment. 41:8990-8994. Abstract
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2007.
Chilling requirement of Ribes cultivars. Frontiers in Plant Science. 5
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2015.
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2009.
Production and properties of monoclonal antibodies to Solanum nodiflorum mottle sobemovirus. Annals of Applied Biology. 146:321-325. Abstract
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2005.
Viral diagnostics in plants using next generation sequencing: computational analysis in practice. Frontiers in Plant Science. 8:ArticleNo.1770.
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2017.
Autumnal N storage determines the spring growth, N uptake and N internal cycling of young peach trees. Trees - Structure and Function. 26:393-404.
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2012.
The effect of autumn N supply on the architecture of young peach (Prunus persica L.) trees. Trees. 23(2):235-245.
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2009.
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2015.
The twin arginine protein transport pathway exports multiple virulence proteins in the plant pathogen Streptomyces scabies. Molecular Microbiology. 77:252-271.
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2010.
The INDETERMINATE DOMAIN protein BROAD LEAF1 limits barley leaf width by restricting lateral proliferation. Current Biology. 26:903-909.
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2016.
A homolog of Blade-On-Petiole 1 and 2 (BOP1/2) controls internode length and homeotic changes of the barley inflorescence. Plant Physiology. 171:1113-1127.
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2016.
Genetic and environmental effects on tannin composition in strawberry (Fragaria x ananassa) cultivars grown in different European locations. Journal of Agricultural and Food Chemistry. 61:790-800.
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2013.
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2019.
Albugo candida race diversity, ploidy and host-associated microbes revealed using DNA sequence capture on diseased plants in the field. New Phytologist. Published online..
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In Press.
Dietary mineral supplies in Africa. Physiologia Plantarum. 151:208-229.
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2014.
Metagenomic analysis of the gut microbiome of the common black slug arion ater in search of novel lignocellulose degrading enzymes. Frontiers in Microbiology. 9:ArticleNo.2181.
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2017.
The development of a visualization methodology for integrated coastal management. Coastal Management. 35(5):525-544.
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2007.
Gene expression profiling during asexual development of the late blight pathogen Phytophthora infestans reveals a highly dynamic transcriptome. Molecular Plant-Microbe Interaction. 21:433-447. Abstract
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2008.
Persistence of Mycobacterium avium subspecies paratuberculosis in rabbits: the interplay between horizontal and vertical transmission. Journal of Applied Ecology. 44:302-311. Abstract
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2007.
Sequential extraction of black currant residues produce anthocyanin-rich extracts containing anthocyanin dimers. Journal of Berry Research. 3:53-64.
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2013.
What are the priority research questions for digital agriculture. Land Use Policy.
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2022.
Key actors in community-driven social innovation in rural areas in the Nordic countries. Journal of Rural Studies. 79:276-285.
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2020.
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2013.
Identification and localisation of the NB-LRR gene family within the potato genome. BMC Genomics. 13:1-14.
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2012.
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2013.
Long-chain alcohols did not improve predictions of the composition of tall fescue and red clover mixtures over n-alkanes alone. Grass and Forage Science. 70:499-506.
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2015.