Publications list
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Reply to Byrnes et al.: Aggregation can obscure understanding of ecosystem multifunctionality. Proceedings of the National Academy of Sciences of the United States of America. 111:E5491-E5491.
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2014.
Reviewing the carbon cycle dynamics and carbon sequestration potential of Cyperus papyrus L. wetlands in tropical Africa. Wetlands Ecology and Management. 22:143-155.
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2014.
A sequence-ready physical map of barley anchored genetically by two million single-nucleotide polymorphisms. Plant Physiology. 164:412-423.
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2014.
The SERRATE protein is involved in alternative splicing in Arabidopsis thaliana. Nucleic Acids Research. 42:1224-1244.
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2014.
Simultaneous extraction and determination of various pesticides in environmental waters. Journal of Separation Science. 37:3699-3705.
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2014.
A single evolutionary innovation drives the deep evolution of symbiotic N-2-fixation in angiosperms. Nature Communications. 5
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2014.
Stability, across environments, of grain and alcohol yield, in soft wheat varieties grown for grain distilling or bioethanol production. Journal of the Science of Food and Agriculture. 94:3234-3240.
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2014.
Standardized and transparent model descriptionsfor agent-based models - current status and prospects. Environmental Modelling and Software. 55:156-163.
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2014.
Transformation of vanadinite (Pb5(VO4)3Cl) by fungi. Environmental Microbiology. Published online..
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2014.
tropiTree: an NGS-based EST-SSR resource for 24 tropical tree species. PLoS ONE. 9:e102502.
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2014.
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2014.
(De-) legitimising hunting - discourses over the morality of hunting in Europe and Eastern Africa. Land Use Policy. 32:261-270.
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2013.
The 3rd DBCLS BioHackathon: improving life science data integration with Semantic Web technologies. Journal of Biomedical Semantics. 4
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2013.
Addressing gender imbalances in animal conservation. Animal Conservation. 16:131-133.
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2013.
Agriculture: Feeding the future. Nature. 499:23-24.
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2013.
Algae influence the hydrophysical parameters of a sandy soil. Catena. 108:58-68.
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2013.
Alpine cushion plants inhibit the loss of phylogenetic diversity in severe environments. Ecology Letters. 16:478-486.
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2013.
Anthocyanin-enriched bilberry and blackcurrant extracts modulate amyloid precursor protein processing and alleviate behavioral abnormalities in the APP/PS1 mouse model of Alzheimer's disease. Journal of Nutritional Biochemistry. 24:360-370.
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2013.
Anticipating and managing future trade-offs and complementarities between ecosystem services. Ecology and Society, 18, 5..
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2013.
Barley whole exome capture: a tool for genomic research in the genus Hordeum and beyond. Plant Journal. 76:494-505.
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2013.
Biophysics of the Vadose Zone: from reality to model systems and back again. Vadose Zone Journal. 12
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2013.
Breeding low-glycemic index barley for functional food. Field Crops Research. 154:31-39.
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2013.
Caffeoyl Shikimate Esterase (CSE) is an enzyme in the lignin biosynthetic pathway. Science. 341:1103-1106.
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2013.
Challenges and opportunities for animal conservation from renewable energy development. Animal Conservation. 16:367-369.
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2013.
A comparative study of the effects of four treatment regimes on ivermectin efficacy, body weight and pasture contamination in lambs naturally infected with gastrointestinal nematodes in Scotland. International Journal for Parasitology - Drugs and Drug Resistance. 3:77-84.
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2013.
Computation of balanced equivalence relations and their lattice for a coupled cell network. Siam Journal on Applied Dynamical Systems. 12:352-382.
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2013.
Concentrations and geographic distribution of selected organic pollutants in Scottish surface soils. Environmental Pollution. 182:15-27.
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2013.
The concept and measurement of importance: a comment on Rees et al. 2012. Journal of Ecology. 101:1369-13789.
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2013.
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2013.
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2013.
Downstairs drivers - root herbivores shape communities of above-ground herbivores and natural enemies via changes in plant nutrients. Journal of Animal Ecology. 82:1021-1030.
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2013.
Editor's choice: Evaluating the potential for adverse interactions within genetically engineered breeding stacks. Plant Physiology. 161:1587-1594.
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2013.
Effects of drought stress during flowering of two pot-grown blackcurrant (Ribes nigrum L.) cultivars. Scientia Horticulturae. 162:365-373.
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2013.
The effects of population density on the breeding performance of mountain hare Lepus timidus. Wildlife Biology. 19:473-482.
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2013.
Emergence of 13_A2 blue lineage of Phytophthora infestans was responsible for severe outbreaks of late blight on tomato in South-West India. Journal of Phytopathology. 161:49-58.
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2013.
Environmental and seasonal influences on red raspberry flavour volatiles and identification of quantitative trait loci (QTL) and candidate genes. Theoretical and Applied Genetics. 126:33-48.
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2013.
Environmental change impacts on the C- and N-cycle of European forests: a model comparison study. Biogeosciences. 10:1751-1773.
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2013.
Estimating U fluxes in a high-latitude, boreal post-glacial setting using U-series isotopes in soils and rivers. Chemical Geology. 354:22-32.
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2013.
Evaluating the impacts of climate variability and disturbance regimes on the historic carbon budget of a forest landscape. Agricultural and Forest Meteorology. 180:265-280.
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2013.
Experimental and bioinformatic evidence that raspberry leaf blotch emaravirus P4 is a movement protein of the 30K superfamily. Journal of General Virology. 94:2117-2128.
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2013.
Exploitation of interspecific diversity for monocot crop improvement. Heredity. 110:475-483.
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2013.
Exposure to chemical cocktails before or after conception - the effect of timing on ovarian function. Molecular and Cellular Endocrinology. 376:156-172.
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2013.
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2013.
FR-H3: a new QTL to assist in the development of fall-sown barley with superior low temperature tolerance. Theoretical and Applied Genetics. 126:335-347.
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2013.
Genetic and environmental effects on tannin composition in strawberry (Fragaria x ananassa) cultivars grown in different European locations. Journal of Agricultural and Food Chemistry. 61:790-800.
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2013.
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2013.
Genetic diversity in caribou linked to past and future climate change. Nature Climate Change. 4:132-137.
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2013.
Identification of the domains of Cauliflower mosaic virus protein P6 responsible for the suppression of RNA-silencing and salicylic acid-signaling. Journal of General Virology. 94:2777-2789.
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2013.
Identification of the phenolic components in Bulgarian raspberry cultivars by LC-ESI-MSn. International Journal of Agricultural Science Research. 3:127-137.
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2013.
Implications of shifts in coffee production on tree species richness, composition and structure on small farms around Mount Kenya. Biodiversity and Conservation. 22:2919-2936.
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2013.
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2013.
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2013.
Incorporating weather sensitivity in inventory-based estimates of boreal forest productivity: a meta-analysis of process model results. Ecological Modelling. 260:25-35.
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2013.
Influence of precursor solvent extraction on stable isotope signatures of methylamphetamine prepared from over-the-counter medicines using the Moscow and hypophosphorous routes. Analytical and Bioanalytical Chemistry. 405:2931-2941.
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2013.
Interrogating participatory catchment organisations: cases from Canada, New Zealand, Scotland and the Scottish-English Borderlands. Geographical Journal. 179:234-247.
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2013.
An invasive Mimosa in India does not adopt the symbionts of its native relatives. Annals of Botany. 112:179-186.
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2013.
Knowledge Exchange: a review and research agenda for environmental management. Environmental Conservation. 40:19-36.
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2013.
Long-term vegetation stability in northern Europe as assessed by changes in species co-occurrences. Plant Ecology and Biodiversity. 6:289-302.
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2013.
The management implications of Aboriginal perceptions of feral pigs (Sus scrofa) in Northern Queensland. A case of feral pig management in the Wet Tropics World Heritage Area, Australia. Journal of Australian Indigenous Issues. 16:53-72.
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2013.
Maternal undernutrition does not alter Sertoli cell numbers or the expression of key developmental markers in the mid-gestation ovine fetal testis. Journal of Negative Results in BioMedicine. 12
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2013.
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2013.
Modellers' roles in structuring integrative research projects. Environmental Modelling and Software. 39:322-330.
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2013.
Natural capital and ecosystem services, developing an appropriate soils framework as a basis for valuation. Soil Biology and Biochemistry. 57:1023-1033.
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2013.
New EU legislation for risk assessment of GM food: no scientific justification for mandatory animal feeding trials. Plant Biotechnology Journal. 11:781-784.
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2013.
No evidence requiring change in the risk assessment of Inachis io larvae. Ecological Modelling. 268:103-122.
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2013.
A novel grass hybrid to reduce flood generation in temperate regions. Nature Scientific Reports, 3, Article no.1683..
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2013.
Nutrient acquisition in four Mediterranean gorgonian species. Marine Ecology Progress Series. 473:179-188.
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2013.
Occurrence and distribution of potato pests and diseases in the major potato growing areas in Kenya. Potato Research. 56:325-342.
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2013.
On the multifunctionality of hunting - an institutional analysis of eight cases from Europe and Africa. Journal of Environmental Planning and Management. 56:531-552.
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2013.
Partial complementation of Sinorhizobium meliloti bacA mutant phenotypes by the Mycobacterium tuberculosis BacA protein. Journal of Bacteriology. 195:389-398.
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2013.
Peri-conceptional changes in maternal exposure to sewage sludge chemicals disturbs fetal thyroid gland development in sheep. Molecular and Cellular Endocrinology. 367:98-108.
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2013.
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2013.
Plant coilin: structural characteristics and RNA-binding properties. PLoS ONE. 8:e53571.
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2013.
Plant-mediated effects of drought on aphid population structure and parasitoid attack rates. Journal of Applied Entomology. 137:136-145.
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2013.
Re-emergence of the Ib mitochondrial haplotype within the British and Irish Phytophthora infestans populations. European Journal of Plant Pathology. 135:237-242.
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2013.
The relationship between soil water storage capacity and plant species diversity in high alpine vegetation. Plant Ecology and Diversity. 6:457-466.
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2013.
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2013.
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2013.
The role of the potato (Solanum tuberosum L.) CCD8 gene in stolon and tuber development. New Phytologist. 198:1108-1120.
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2013.
The rpg4-mediated resistance to wheat stem rust (Puccinia graminis) in barley (Hordeum vulgare) requires Rpg5 gene, a second NBS-LRR gene, and an actin depolymerization factor. Molecular Plant-Microbe Interactions. 26:407-418.
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2013.
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2013.
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2013.
Symbiotic relationships between soil fungi and plants reduce N2O emissions from soil. ISME Journal. 8:1336-1345.
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2013.
A synthetic system for expression of components of a bacterial microcompartment. Microbiology-SGM. 159:2427-2436.
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2013.
Top 10 plant parasitic nematodes in molecular plant pathology. Molecular Plant Pathology. 14:946-961.
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2013.
Towards a unified paradigm for sequence-based identification of fungi. Molecular Ecology. 22:5271-5277.
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2013.
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2013.
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2013.
Unpredicted impacts of insect endosymbionts on interactions between soil organisms, plants and aphids. Proceedings of the Royal Society B. 280:1471-2954.
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2013.
Unravelling complexity in inter-species interaction through nonlinear dynamical models. Acta Ethologica. 16:21-30.
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2013.
The use of transient expression systems for the rapid production of virus-like particles in plants. Current Pharmaceutical Design. 19:5564-5573.
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2013.
Vitamin C and the abscisic acid-insensitive 4 transcription factor are important determinants of aphid resistance in arabidopsis. Antioxidants and Redox Signalling. 18:2091-2105.
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2013.
Vitamin D in pregnancy at high latitude in Scotland. British Journal of Nutrition. 109:898-905.
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2013.
What determines the acceptability of wildlife control methods? A case of feral pig management in the wet tropics world heritage area, Australia Human Dimensions of Wildlife. 18:97-108.
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2013.
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2013.
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2012.
The ABA-Insensitive-4 (AB14) transcription factor links redox, hormone and sugar signalling pathways (Review). Plant Signaling and Behavior. 7:276-281.
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2012.
Aboriginal rangers' perspectives on feral pigs: are they a pest or a resource? A case study in the wet tropics world heritage area of Northern Queensland Journal of Australian Indigenous Issues. 15:2-19.
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2012.
Aboveground-belowground herbivore interactions: a meta-analysis. Ecology. 93:2208-2215.
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2012.
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2012.
Allele mining in barley genetic resources reveals genes of race-non-specific powdery mildew resistance. Frontiers in Plant Science. 2:113.
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2012.
Alperujo extract, hydroxytyrosol, and 3,4-dihydroxyphenylglycol are bioavailable and have antioxidant properties in vitamin e-deficient ratsua proteomics and network analysis approach. Molecular Nutrition and Food Research. 56:1131-1147.
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2012.
Alternative splicing and nonsense-mediated decay modulate expression of important regulatory genes in Arabidopsis. Nucleic Acids Research. 40:2454-2469.
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2012.
Alternative splicing in plants - coming of age. Trends in Plant Science. 17:616-623.
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2012.
Analysis of improvements in nitrogen use efficiency associated with 75 years of spring barley breeding. European Journal of Agronomy. 42:49-58.
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2012.
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2012.
Are feral pigs (Sus scrofa) a pest to rainforest tourism? Journal of Ecotourism. 11:132-148.
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2012.
Assessing dietary exposure to cadmium in a metal recycling community in Vietnam: age and gender aspects. Science of the Total Environment. 416:164-171.
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2012.
Assessing species and community functional responses to environmental gradients: which multivariate methods? Journal of Vegetation Science. 23:805-821.
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2012.
Assessment of the draft hydrological basin plan of the Guadalquivir River Basin (Spain). Water Resources Development.. 28:43-55.
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2012.
Biological nitrification inhibition (BNI) - a novel strategy to regulate nitrification in agricultural systems. Advances in Agronomy. 114:249-302.
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2012.
Biotic modifiers, environmental modulation and species distribution models. Journal of Biogeography. 39:2179-2190.
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2012.
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2012.
Climate change? No, wise resource use is the issue: social representations of energy, climate change and the future Environmental Policy and Governance. 22:161-176.
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2012.
Comparing empirical models for sediment and phosphorus transfer from soils to water at field and catchment scale under data uncertainty. European Journal of Soil Science. 63:221-223.
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2012.
Compositional and toxicological analysis of a GM potato line with reduced alpha-solanine content - A 90-day feeding study in the Syrian Golden hamster. Food and Chemical Toxicology. 64:177-185.
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2012.
Data and models for exploring sustainability of human well-being in global environmental change. European Physical Journal Special Topics.. 214:519-545.
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2012.
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2012.
Detection of counterfeit Scotch whisky by H-2 and O-18 stable isotope analysis. Food Chemistry. 133:1070-1074.
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2012.
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2012.
Distribution of calcium (Ca) and magnesium (Mg) in the leaves of Brassica rapa under varying exogenous Ca and Mg supply. Annals of Botany. 109:1081-1089.
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2012.
Diversity and community composition of ectomycorrhizal fungi in a dry deciduous dipterocarp forest in Thailand. Biodiversity and Conservation, 21, 2287-2298..
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2012.
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2012.
Editor's Choice: crop genome plasticity and its relevance to food and feed safety of genetically engineered breeding stacks. Plant Physiology. 160:1842-1853.
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2012.
Effect of supplementation with an 80:20 cis9, trans11 conjugated linoleic acid blend on the human platelet proteome. Molecular Nutrition and Food Research. 56:1148-1159.
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2012.
Epigenetic remodeling of meiotic crossover frequency in arabidopsis thaliana DNA methyltransferase mutants. PLoS Genetics. 8:e1002844.
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2012.
Evaluating the utility of N-15 and O-18 isotope abundance analyses to identify nitrate sources: a soil zone study. Water Research. 46:3723-3736.
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2012.
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2012.
Fisheries conservation and management: finding consensus in the midst of competing paradigms. Animal Conservation. 15:1-3.
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2012.
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2012.
Funding nature conservation: who pays? Animal Conservation. 15:215-216.
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2012.
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2012.
Genetic diversity in European Pisum germplasm collections. Theoretical and Applied Genetics. 125:367-380.
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2012.
The genetic ghost of an invasion past: colonization and extinction revealed by historical hybridisation in Senecio. Molecular Ecology. 21:369-387.
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2012.
Genetic linkage mapping in an F2 perennial ryegrass population saturated with DArT markers. Plant Breeding. 131:345-349.
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2012.
Genome sequencing and mapping reveal loss of heterozygosity as a mechanism for rapid adaptation in the vegetable pathogen phytophthora capsici. Molecular Plant-Microbe Interactions. 25:1350-1360.
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2012.
Genome-wide identification of genes regulated by the Rcs phosphorelay system in Erwinia amylovora. Molecular Plant-Microbe Interactions. 25:6-17.
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2012.
Global change and the world's mountains: research needs and emerging themes for sustainable development. A synthesis from the 2010 Perth II conference. Mountain Research and Development. 32:S47-S54.
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2012.
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2012.
An hnRNP-like RNA-binding protein affects alternative splicing by in vivo interaction with transcripts in Arabidopsis thaliana. Nucleic Acids Research. 40:11240-11255.
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2012.
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2012.
How conserved are the bacterial communities associated with aphids? A detailed assessment of the cabbage aphid (Brevicoryne brassicae) using 16S rDNA Environmental Entomology. 41:1386-1397.
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2012.
The identification and interpretation of differences in the transcriptomes of organically and conventionally grown potato tubers. Journal of Agricultural and Food Chemistry. 60:2090-2101.
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2012.
Induced mutations in circadian clock regulator Mat-a facilitated short-season adaptation and range extension in cultivated barley. Proceedings of the National Academy of Sciences, USA. 109:4326-4331.
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2012.
Infestation of potato (Solanum tuberosum L.) by the peach-potato aphid (Myzus persicae Sulzer) alters cellular redox status and is influenced by ascorbate. Plant Cell and Environment. 35:430-440.
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2012.
Inorganic arsenic and basal cell carcinoma in areas of Hungary, Romania, and Slovakia: A case-control study. Environmental Health Perspectives. 120:721-726.
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2012.
Interactions between profit and welfare on extensive sheep farms. Animal Welfare. 21:57-64.
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2012.
Linking biotopes to invertebrates in rivers: biological traits, taxonomic composition and diversity. Ecological Indicators. 23:301-311.
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2012.
Lipophilic components in black currant seed and pomace extracts. European Journal of Lipid Science and Technology. 114:575-582.
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2012.
Long-term dynamics of soil C and N in intensive rice-based cropping systems of the Indo-Gangetic Plains (IGP): A modelling approach. Ecological Modelling. 232:40-63.
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2012.
Long-term spatial pattern change in a semi-arid plant community: The role of climate and composition. Acta Oecologia. 45:8-15.
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2012.
Macroinvertebrate abundance and proportion of trait categories in river biotopes across England and Wales. PANGEAE database Supplement to: Demars, B.O.L.; Kemp, J.L.; Friberg, N.; Usseglio-Polatera, P.; Harper, D.M. (2012): Linking biotopes to invertebrates in rivers: biological traits, taxonomic composition and diversity. Ecological Indicators.. 23:301-311.
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2012.
Managed honey bee colony losses in Canada, China, Europe, Israel and Turkey, for the winters of 2008-9 and 2009-10. Journal of Agricultural Research. 51:91-114.
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2012.
Mapping of earthworm distribution for the British Isles and Eire highlights the under-recording of an ecologically important group. Biodiversity and Conservation. 21:475-485.
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2012.
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2012.
Movement protein of hordeivirus interacts in vitro and in vivo with coilin, a major structural protein of Cajal bodies. Doklady Biochemistry and Biophysics. 442:57-60.
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2012.
Multi-level governance: opportunities and barriers in moving to a low-carbon Scotland. Earth and Environmental Science, Transactions of the Royal Society of Edinburgh. 103:175-186.
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2012.
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2012.
Nodulation and ecological significance of indigenous legumes in Scotland and Sweden. Symbiosis. 57:133-48.
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2012.
Nodulation of legumes from the Thar desert of India and molecular characterization of their rhizobia. Plant and Soil. 357:227-243.
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2012.
A novel application of natural fluorescence to understand the sources and transport pathways of pollutants from livestock farming in small headwater catchments. Science of the Total Environment. 417:169-182.
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2012.
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2012.
Overstory and understory vegetation interact to alter soil community composition and activity. Plant and Soil. 352:65-84.
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2012.
Pathogenic potential to humans of bovine Escherichia coli O26, Scotland. Emerging Infectious Diseases. 18:439-448.
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2012.
Plant responses to insect herbivory: interactions between photosynthesis, reactive oxygen species and hormonal signalling pathways (Review). Plant Cell and Environment. 35:441-453.
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2012.
Potential environment and public health risk due to contamination of heavy metals from industrial waste water in Lam Thao, Phu Tho, Vietnam. American Journal of Environmental Sciences. 8:71-78.
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2012.
Powdery scab resistance in Solanum tuberosum: an assessment of cultivar x environment effect. Plant Pathology. 61:29-36.
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2012.
Protected raspberry production alters aphid-plant interactions but not aphid population size. Agricultural and Forest Entomology. 14:217-224.
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2012.
Raspberry viruses manipulate the behaviour of their insect vectors. Entomologia Experimentalis et Applicata. 144:56-68.
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2012.
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2012.
Rhynchosporium commune: a persistent threat to barley cultivation. Molecular Plant Pathology. 13:986-997.
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2012.
Riparian buffer strips as a multifunctional management tool in agricultural landscapes: introduction. Journal of Environmental Quality. 41:297-303.
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2012.
Risk perception - Issues for flood management in Europe. Natural Hazards and Earth System Sciences. 12:2299-2309.
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2012.
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2012.
The role of parental behaviour for the development of behaviour specific environmental norms - the example of recycling and re-use behaviour. Journal of Environmental Psychology. 32:277-284.
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2012.
Suboptimal dietary zinc intake promotes vascular inflammation and atherogenesis in a mouse model of atherosclerosis. Molecular Nutrition and Food Research. 56:1097-1105.
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2012.
Sustainable diets for the future: can we contribute to reducing greenhouse gas emissions by eating a healthy diet? American Journal of Clinical Nutrition. 96:632-639.
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2012.
Sustaining multifunctional forestry through the developing of social capital and promoting participation: A case of multiethnic mountain communities. Small Scale Forestry Journal. 11:301-319.
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2012.
Synthesis of nanoparticles using plants. Nanoindustry. 7:16-22.
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2012.
Systems approaches in global change and biogeochemistry research. Philosophical Transactions of the Royal Society. Series B. Biological Sciences.. 367:311-321.
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2012.
Transcriptional changes in teladorsagia circumcincta upon encountering host tissue of differing immune status. Parasitology. 139:387-405.
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2012.
Transcriptional response of Pseudomonas aeruginosa to a phosphate-deficient Lolium perenne rhizosphere. Plant and Soil. 359:25-44.
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2012.
Transcriptome survey reveals increased complexity of the alternative splicing landscape in Arabidopsis. Genome Research. 22:1184-1195.
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2012.
Using isotopic fractionation to link precursor to product in the synthesis of (±)-mephedrone. A new tool for combating 'legal high' drugs. Analytical Chemistry. 84:8691-8696.
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2012.
Variation in terrestrial mammal abundance on pastoral and conservation land tenures in north-eastern Australian tropical savannas. Animal Conservation. 15:416-425.
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2012.
What the "food security" agenda means for animal conservation in terrestrial ecosystems. Animal Conservation. 15:115-116.
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2012.
2H stable isotope analysis of human tooth enamel: a new tool for forensic human provenancing? Rapid Communications in Mass Spectrometry. 25:910-916.
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2011.
Allele mining in barley genetic resources reveals genes of race-nonspecific powdery mildew resistance. Frontiers in Plant Science: Plant Nutrition. 2:e113.
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2011.
The anaerobic digestion of solid organic waste. Waste Management. 31:1737-1744.
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2011.
Analysis of plant diversity with retrotransposon-based molecular markers. Heredity. 106:520-530.
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2011.
Analysis of time series data on agroecosystem vegetation using predictive clustering trees. Ecological Modelling. 222:2524-2529.
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2011.
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2011.
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2011.
Barriers to institutional learning and innovations in the forest sector in Europe: Markets, policies and stakeholders. Forest Policy and Economics. 13:124-131.
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2011.
Changes in mineralogy of loess-paleosol sections across the Chinese Loess Plateau. Quaternary Research. 75:245-255.
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2011.
Changes in the management of Scottish machair communities and associated habitats from the 1970s to the present. Scottish Geographical Journal. 127:267-287.
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2011.
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2011.
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2011.
Climatic drivers of plant-plant interactions and diversity in alpine communities. Alpine Botany. 121:63-70.
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2011.