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2017
Mascher M, Gundlach H, Himmelbach A, Beier S, Twardziok SO, Wicker T, Radchuk V, Dockter C, Hedley PE, Russell J et al..  2017.  A chromosome conformation capture ordered sequence of the barley genome. Nature. 544:427-433.
Wang C, White PJ, Li C.  2017.  Colonization and community structure of arbuscular mycorrhizal fungi in maize roots at different depths in the soil profile respond differently to phosphorus inputs on a long-term experimental site. Mycorrhiza. 27:369-381.
Yoshida Y, Koutsovoulos G, Laetsch DR, Stevens L, Kumar S, Horikawa DD, Ishino K, Komine S, Kunieda T, Tomita M et al..  2017.  Comparative genomics of the tardigrades Hypsibius dujardini and Ramazzottius varieornatus. PLoS Biology. 15:e2002266.
Castro AJ, Cuesta-Marcos A, Hayes PM, Locatelli A, Macaulay M, Mastandrea N, Silveira M, Thomas WTB, Viega L.  2017.  The completely additive effects of two barley phenology-related genes (eps2S and sdw1) are explained by specific effects at different periods within the crop growth cycle. Plant Breeding. 136:663-670.
McDougall GJ, Allwood JW, Pereira-Caro G, Brown EM, Latimer C, Dobson G, Stewart D, Ternan NG, Lawther R, O'Connor G et al..  2017.  The composition of potentially bioactive triterpenoid glycosides in red raspberry is influenced by tissue, extraction procedure and genotype. Food and Function. 8:3469-3479.
Beier S, Himmelbach A, Colmsee C, Zhang XQ, Barrero RA, Zhang QS, Li L, Bayer M, Bolser D, Taudien S et al..  2017.  Construction of a map-based reference genome sequence for barley, Hordeum vulgare L. Scientific Data. 4:ArticleNo.170044.
Beier S, Himmelbach A, Colmsee C, Zhang XQ, Barrero RA, Zhang QS, Li L, Bayer M, Bolser D, Taudien S et al..  2017.  Construction of a map-based reference genome sequence for barley, Hordeum vulgare L. Scientific Data. 4:ArticleNo.170044.
Calladine J, Humphreys EM, Gilbert L, Furness RW, Robinson RA, Fuller RJ, Littlewood NA, Pakeman RJ, Ferguson J, Thompson C.  2017.  Continuing influences of introduced hedgehogs Erinaceus europaeus as a predator of wader (Charadrii) eggs four decades after their release on the Outer Hebrides, Scotland. Biological Invasions. 19:1981-1987.
Albon SD, Irvine RJ, Halvorsen O, Langvatn R, Loe LE, Ropstad E, Veiberg V, van der Wal R, Bjorkvoll EM, Duff EI et al..  2017.  Contrasting effects of summer and winter warming on body mass explain population dynamics in a food-limited Arctic herbivore. Global Change Biology. 23:1374-1389.
Boldrin D, Leung AK, Bengough AG.  2017.  Correlating hydrologic reinforcement of vegetated soil with plant traits during establishment of woody perennials. Plant and Soil. 416:437-451.
Prager K, Creaney R, Lorenzo-Arribas A.  2017.  Criteria for a system level evaluation of farm advisory services. Land Use Policy. 61:86-98.
Maiorano A, Martre P, Asseng S, Ewert F, Muller C, Rotter RP, Ruane AC, Semenov MA, Wallach D, Wang EL et al..  2017.  Crop model improvement reduces the uncertainty of the response to temperature of multi-model ensembles. Field Crops Research. 202:5-20.
Kanvil S, Pham J, Lopez-Cobollo R, Selby M, Bennett M, Beckingham C, Powell G, Turnbull C.  2017.  Cucurbit extrafascicular phloem has strong negative impacts on aphids and is not a preferred feeding site. Plant Cell and Environment. 40:2780-2789.
Hudson LN, Newbold T, Contu S, Hill SLL, Lysenko I, De Palma A, Phillips HRR, Alhusseini TI, Bedford FE, Bennett DJ et al..  2017.  The database of the PREDICTS (Projecting Responses of ecological Diversity in Changing Terrestrial Systems). Ecology and Evolution. 7:145-188.
Hudson LN, Newbold T, Contu S, Hill SLL, Lysenko I, De Palma A, Phillips HRR, Alhusseini TI, Bedford FE, Bennett DJ et al..  2017.  The database of the PREDICTS (Projecting Responses of ecological Diversity in Changing Terrestrial Systems). Ecology and Evolution. 7:145-188.
Wijedasa LS, Jauhiainen J, Kononen M, Lampela M, Vasander H, LeBlanc MC, Evers S, Smith TEL, Yule CM, Varkkey H et al..  2017.  Denial of long-term issues with agriculture on tropical peatlands will have devastating consequences. Global Change Biology. 23:977-982.
Wijedasa LS, Jauhiainen J, Kononen M, Lampela M, Vasander H, LeBlanc MC, Evers S, Smith TEL, Yule CM, Varkkey H et al..  2017.  Denial of long-term issues with agriculture on tropical peatlands will have devastating consequences. Global Change Biology. 23:977-982.
Ferdous J, Sanchez-Ferrero JC, Langridge P, Milne L, Chowdhury J, Brien C, Tricker PJ.  2017.  Differential expression of microRNAs and potential targets under drought stress in barley. Plant Cell and Environment. 40:11-24.
Lechenet M, Deytieux V, Antichic D, Aubertot JN, Bàrberi B, Bertrand M, Cellier V, Charles R, Colnenne-David C, Dachbrodt-Saaydeh S et al..  2017.  Diversity of methodologies to experiment Integrated Pest Management in arable cropping systems: analysis and reflections based on a European network. European Journal of Agronomy. 83:86-99.
Lechenet M, Deytieux V, Antichic D, Aubertot JN, Bàrberi B, Bertrand M, Cellier V, Charles R, Colnenne-David C, Dachbrodt-Saaydeh S et al..  2017.  Diversity of methodologies to experiment Integrated Pest Management in arable cropping systems: analysis and reflections based on a European network. European Journal of Agronomy. 83:86-99.
Redpath SM, Linnell JDC, Festa-Bianchet M, Boitani L, Bunnefeld N, Dickman A, Gutiérrez RJ, Irvine RJ, Johansson M, Majic A et al..  2017.  Don't forget to look down - collaborative approaches to predator conservation. Biological Reviews. Published online..
Redpath SM, Linnell JDC, Festa-Bianchet M, Boitani L, Bunnefeld N, Dickman A, Gutiérrez RJ, Irvine RJ, Johansson M, Majic A et al..  2017.  Don't forget to look down - collaborative approaches to predator conservation. Biological Reviews. 92:2157-2163.
Pakeman RJ, Hewison RL, Lewis RJ.  2017.  Drivers of species richness and compositional changes in Scottish coastal vegetation. Applied Vegetation Science. 20:183-193.
Vannucchi PE, Peralta-Maraver I, de Figueroa JMT, Lopez-Rodrigueza MJ.  2017.  Dynamics of the macroinvertebrate community and food web of a Mediterranean stream. Journal of Freshwater Ecology. 32:223-239.
Getnet K, Mekuria W, Langan S, Rivington M, Novo P, Black HIJ.  2017.  Ecosystem-based interventions and farm household welfare in degraded areas: Comparative evidence from Ethiopia. Agricultural Systems. 154:53-62.
Shuzhong G, Jenkins A, Gao SJ, Lu Y, Li H, Li Y, Ferrier RC, Bailey M, Wang Y, Zhang Y et al..  2017.  Ensuring water resource security in China; the need for advances in evidence-based policy to support sustainable management. Environmental Science and Policy. 75:65-69.
Gu SZ, Jenkins A, Gao SJ, Lu YL, Li H, Li YY, Ferrier RC, Bailey M, Wang YW, Zhang Y et al..  2017.  Ensuring water resource security in China; the need for advances in evidence-based policy to support sustainable management. Environmental Science and Policy. 75:65-69.
Gilbert L, Brunker K, Lande U, Klingen I, Grova L.  2017.  Environmental risk factors for Ixodes ricinus ticks and their infestation on lambs in a changing ecosystem: Implications for tick control and the impact of woodland encroachment on tick-borne disease in livestock. Agriculture Ecosystems and Environment. 237:265-273.
Guo W, Calixto CPG, Tzioutziou N, Lin P, Waugh R, Brown JWS, Zhang R.  2017.  Evaluation and improvement of the regulatory inference for large co-expression networks with limited sample size. BMC Systems Biology. 11:ArticleNo.62.
Liller CB, Walla A, Boer MP, Hedley P, Macaulay M, Effgen S, von Korff M, van Esse GW, Koornneef M.  2017.  Fine mapping of a major QTL for awn length in barley using a multiparent mapping population. Theoretical and Applied Genetics. 130:269-281.
Vávra J, Megyesi B, Duzi B, Craig T, Klufová R, Lapka M, Cudlínová E.  2017.  Food self-provisioning in Europe - an exploration of sociodemographic factors in five regions. Rural Sociology. Published online..
Begg GS, Cook SM, Dye R, Ferrante M, Franck P, Lavigne C, Lovei GL, Mansion-Vaquie A, Pell JK, Petit S et al..  2017.  A functional overview of conservation biological control. Crop Protection. 97:145-158.
Hassan AS, Houston K, Lahnstein J, Shirley N, Schwerdt JG, Gidley MJ, Waugh R, Little A, Burton RA.  2017.  A genome wide association study of arabinoxylan content in 2-row spring barley grain. PLoS ONE. 12:e0182537.
Kerr PJ, Cattadori IM, Rogers MB, Fitch A, Geber A, Liu J, Sim DG, Boag B, Eden JS, Ghedin E et al..  2017.  Genomic and phenotypic characterization of myxoma virus from Great Britain reveals multiple evolutionary pathways distinct from those in Australia. PLoS Pathogens. 13:ArticleNo.e1006252.
Zhang RX, Calixto CPG, Marquez Y, Venhuizen P, Tzioutziou NA, Guo WB, Spensley M, Entizne JC, Lewandowska D, Ten Have S et al..  2017.  A high quality Arabidopsis transcriptome for accurate transcript-level analysis of alternative splicing. Nucleic Acids Research. 45:5061-5073.
Asseng S, Cammarano D, Basso B, Chung U, Alderman PD, Sonder K, Reynolds M, Lobell DB.  2017.  Hot spots of wheat yield decline with rising temperatures. Global Change Biology. 23:24264-2472.
Gray A, Perry A, Cavers S, Eastwood A, Biermann M, Darlow A, Thomas V, Lambdon P.  2017.  Hybrid plants preserve unique genetic variation in the St Helena endemic trees Commidendrum rotundifolium DC Roxb. and C. spurium (G.Forst.) DC. Conservation Genetics. 18:241-246.
Adams MJ, Adkins S, Bragard C, Gilmer D, Li DW, MacFarlane SA, Wong SM, Melcher U, Ratti C, Ryu KH.  2017.  ICTV Virus taxonomy profile: Virgaviridae. Journal of General Virology. 98:1999-2000.
Kuhnert M, Yeluripati J, Smith P, Hoffmann H, Van Oijen M, Constantin J, Coucheney E, Dechow R, Eckersten H, Gaiser T et al..  2017.  Impact analysis of climate data aggregation at different spatial scales on simulated net primary productivity for croplands. European Journal of Agronomy. 88:41-52.
Kuhnert M, Yeluripati J, Smith P, Hoffmann H, Van Oijen M, Constantin J, Coucheney E, Dechow R, Eckersten H, Gaiser T et al..  2017.  Impact analysis of climate data aggregation at different spatial scales on simulated net primary productivity for croplands. European Journal of Agronomy. 88:41-52.
Grosz B, Dechow R, Gebbert S, Hoffmann H, Zhao G, Constantin J, Raynal H, Wallach D, Coucheney E, Lewan E et al..  2017.  The implication of input data aggregation on up-scaling soil organic carbon changes. Environmental Modelling and Software. 96:361-377.
He Y, Zhang H, Sun Z, Li J, Hong G, Zhu Q, Zhou X, MacFarlane S, Yan F, Chen J.  2017.  Jasmonic acid-mediated defense suppresses brassinosteroid-mediated susceptibility to Rice black streaked dwarf virus infection in rice. New Phytologist.
Laetsch DR, Blaxter ML.  2017.  KinFin: software for taxon-aware analysis of clustered protein sequences. G3-Genes Genomes Genetics. 7:3349-3357.
Pakeman RJ, Hewison RL, Lewis RJ.  2017.  Linking functional traits and species preferences to species’ abundance and occupancy trends through time to identify habitat changes in coastal ecosystems. Perspectives in Plant Ecology, Evolution and Systematics. 27:35-44.
Giles CD, George TS, Brown LK, Mezeli M, Shand CA, Richardson AE, Mackay R, Wendler R, Darch T, Menezes-Blackburn D et al..  2017.  Linking the depletion of rhizosphere phosphorus to the heterologous expression of a fungal phytase in Nicotiana tabacum as revealed by enzyme-labile P and solution 31 P NMR spectroscopy. Rhizosphere. 3:82-91.
Tipping EW, Davies J, Henrys PA, Kirk G, Lilly A, Dragosits U, Carnell EJ, Dore A, Sutton M, Tomlinson SJ.  2017.  Long-term increases in soil carbon due to ecosystem fertilization by atmospheric nitrogen deposition demonstrated by regional-scale modelling and observations. Scientific Reports. 7:ArticleNo.1890.
Veiberg V, Loe LE, Albon SD, Irvine RJ, Tveraa T, Ropstad E, Stien A.  2017.  Maternal winter body mass and not spring phenology determine annual calf production in an Arctic herbivore. Oikos. 126:980-987.
Dawson IK, van Breugel P, Coe R, Kindt R, van Zonneveld M, Lilleso JPB, Graudal L, Muchugi A, Russell J, Jamnadass R.  2017.  A meta-analysis of molecular marker genetic datasets for eastern Africa trees supports the utility of potential natural vegetation maps for planning climate-smart restoration initiatives. Tree Genetics and Genomes. 13:ArticleNo.71.
Williams D, Britten A, McCallum S, Jones H, Aitkenhead M, Karley A, Loades K, Prashar A, Graham J.  2017.  A method for automatic segmentation and splitting of hyperspectral images of raspberry plants collected in field conditions. Plant Methods. 13:ArticleNo.74.
Shaldybin MV, Lopushnyak YM, Goncharov IV, Wilson MJ, Wilson L, Mendis BG.  2017.  The mineralogy of the clayey-silty siliceous rocks in the Bazhenov Shale Formation (upper Jurassic) in the west Siberian basin, Russia: the role of diagenesis and possible implications for their exploitation as an unconventional hydrocarbon reservoi. Applied Clay Science. 136:75-89.
Landl M, Huber K, Schnepf A, Vanderborght J, Javaux M, Bengough AG, Vereecken H.  2017.  A new model for root growth in soil with macropores. Plant and Soil. 415:99-116.
Kårlund A, Hanhineva K, Lehtonen M, McDougall GJ, Stewart D, Karjalainen RO.  2017.  Non-targeted metabolite profiling highlights the potential of strawberry leaves as a resource for specific bioactive compounds. Journal of the Science of Food and Agriculture. 97:2182-2190.
McDougall GJ, Allwood JW, Pereira-Caro G, Brown EM, Verrall S, Stewart D, Latimer C, McMullan G, Lawther R, O'Connor G et al..  2017.  Novel colon-available triterpenoids identified in raspberry fruits exhibit antigenotoxic activities in vitro. Molecular Nutrition and Food Research. 61:ArticleNo.1600327.
Leles SG, Mitra A, Flynn KJ, Stoecker DK, Hansen PJ, Calbet A, McManus GB, Sanders RW, Caron DA, Not F et al..  2017.  Oceanic protists with different forms of acquired phototrophy display contrasting biogeographies and abundance. Proceedings of the Royal Society B, Biological Sciences. 284:ArticleNo.1860.
Smith RI, Barton DN, Dick J, Haines-Young R, Madsen AL, Rusch GM, Termansen M, Woods H, Carvalho L, Giuca RC et al..  2017.  Operationalising ecosystem service assessment in bayesian belief networks: Experiences within the OpenNESS project. Ecosystem Services. 29:452-464.
Larson BMH, van der Wal R, Fischer A, Selge S.  2017.  Origin might matter; people matter, too. A response to the comment by Rejmanek and Simberloff, 2016. Environmental Conservation. 44:100-101.
Lupolova N, Dallman TJ, Holden NJ, Gally DL.  2017.  Patchy promiscuity: machine learning applied to predict the host specificity of Salmonella enterica and Escherichia coli. Microbial Genomics, 3, (Open Access).
Aitkenhead MJ, Gaskin GJ, Lafouge N, Hawes C.  2017.  PHYLIS: A low-cost portable visible range spectrometer for soil and plants. Sensors. 17:ArticleNo.99.
Knierim A, Labarthe P, Laurent C, Prager K, Kania J, Madureira L, Ndah TH.  2017.  Pluralism of agricultural advisory service providers - Facts and insights from Europe. Journal of Rural Studies. 55:45-58.
Banerjee S, Tawade BV, Ladmiral V, Dupuy LX, MacDonald MP, Ameduri B.  2017.  Poly (fluoroacrylate)s with tunable surface hydrophobicity via radical copolymerization of 2, 2, 2-trifluoroethyl a-fluoroacrylate and 2-(trifluoromethyl) acrylic acid. Polymer Chemistry. 8:1978-1988.
Bruce TJA, Smart L, Birch ANE, Blok VC, MacKenzie K, Guerrieri E, Cascone P, Luna E, Ton J.  2017.  Prospects for plant defence activatiors and biocontrol in IPM - concpets and lessons learnt so far. Crop Protection. 97:128-134.
Jin XB, Robinson K, Lee A, Polhill JG, Pritchard C, Parker DC.  2017.  A prototype cloud-based reproducible data analysis and visualization platform for outputs of agent-based models. Environmental Modelling and Software. 96:172-180.
Busby PE, Soman C, Wagner MR, Friesen ML, Kremer J, Bennett AE, Morsy M, Eisen JA, Leach JA, Dangl JL.  2017.  Research priorities for harnessing plant microbiomes in sustainable agriculture. PLoS Biology. 15:ArticeleNo.e2001793.
Giles CD, Brown LK, Adu MO, Mezeli MM, Sandral GA, Simpson RJ, Wendler R, Shand CA, Menezes-Blackburn D, Darch T et al..  2017.  Response-based selection of barley cultivars and legume species for complementarity: Root morphology and exudation in relation to nutrient source. Plant Science. 255:12-28.
Giles CD, Brown LK, Adu MO, Mezeli MM, Sandral GA, Simpson RJ, Wendler R, Shand CA, Menezes-Blackburn D, Darch T et al..  2017.  Response-based selection of barley cultivars and legume species for complementarity: Root morphology and exudation in relation to nutrient source. Plant Science. 255:12-28.
Boldrin D, Leung AK, Bengough AG.  2017.  Root biomechanical properties during establishment of woody perennials. Ecological Engineering. Published online..
Hafren A, Macia JL, Lovel AJ, Milner JJ, Drucker M, Hofius D.  2017.  Selective autophagy limits Cauliflower mosaic virus infection by NBR1-mediated targeting of viral capsid protein and particles. Proceedings of the National Academy of Sciences (PNAS). 114:E2026-E2035.
Liang T, Knappett JA, Bengough AG, Ke YX.  2017.  Small-scale modelling of plant root systems using 3D printing, with applications to investigate the role of vegetation on earthquake-induced landslides. Landslides. Published online..
Liang T, Knappett JA, Bengough AG, Ke YX.  2017.  Small-scale modelling of plant root systems using 3D printing, with applications to investigate the role of vegetation on earthquake-induced landslides. Landslides. 14:1747-1765.
Sarkki S, Jokinen M, Nijnik M, Zahvoyska L, Abraham EM, Alados CL, Bellamy C, Bratanova-Dontcheva S, Grunewald K, Kollar J et al..  2017.  Social equity in governance of ecosystem services: synthesis from European treeline areas. Climate Research. 73:31-44.
Sarkki S, Jokinen M, Nijnik M, Zahvoyska L, Abraham EM, Alados CL, Bellamy C, Bratanova-Dontcheva S, Grunewald K, Kollar J et al..  2017.  Social equity in governance of ecosystem services: synthesis from European treeline areas. Climate Research. 73:31-44.
Arrouays D, Leenaars JGB, Richer-de-Forges A, Adhikari K, Ballabio C, Greve M, Grundy M, Guerrero E, Hempel J, Hengl T et al..  2017.  Soil legacy data rescue via GlobalSoilMap and other international and national initiatives. GeoResJ. 14:1-19.
Arrouays D, Leenaars JGB, Richer-de-Forges A, Adhikari K, Ballabio C, Greve M, Grundy M, Guerrero E, Hempel J, Hengl T et al..  2017.  Soil legacy data rescue via GlobalSoilMap and other international and national initiatives. GeoResJ. 14:1-19.
Nemo, Klumpp K, Coleman K, Dondini M, Goulding K, Hastings A, Jones MB, Leifeld J, Osborne B, Saunders M et al..  2017.  Soil organic carbon (SOC) equilibrium and model initialisation methods: an application to the Rothamsted carbon (RothC) model. Environmental Modeling and Assessment. 22:215-239.
Pan F, Chapman SJ, Li Y, Yao H.  2017.  Straw amendment to paddy soil stimulates denitrification but biochar amendment promotes anaerobic ammonia oxidation. Journal of Soils and Sediments..
Pan F, Chapman SJ, Li Y, Yao H.  2017.  Straw amendment to paddy soil stimulates denitrification but biochar amendment promotes anaerobic ammonia oxidation. Journal of Soils and Sediments. 17:2428-2437.
Vasileiadis VP, Dachbrodt-Saaydeh S, Kudsk P, Colnenne-David C, Leprince F, Holb IJ, Kierzek R, Furlan L, Loddo D, Melander B et al..  2017.  Sustainability of European winter wheat- and maize-based cropping systems: economic, environmental and social ex-post assessment of conventional and IPM-based systems. Crop Protection. 97:60-69.
von der Luhe B, Fiedler S, Mayes RW, Dawson LA.  2017.  Temporal fatty acid profiles of human decomposition fluid in soil. Organic Geochemistry. 111:26-33.
Glendell M, McShane G, Farrow L, James MR, Quinton J, Anderson K, Evans M, Benaud P, Rawlins B, Morgan D et al..  2017.  Testing the utility of structure-from-motion photogrammetry reconstructions using small unmanned aerial vehicles and ground photography to estimate the extent of upland soil erosion. Earth Surface Processes and Landforms. Published online..
Glendell M, McShane G, Farrow L, James MR, Quinton J, Anderson K, Evans M, Benaud P, Rawlins B, Morgan D et al..  2017.  Testing the utility of structure-from-motion photogrammetry reconstructions using small unmanned aerial vehicles and ground photography to estimate the extent of upland soil erosion. Earth Surface Processes and Landforms. 42:1860-1871.
de Ruiter HR, Macdiarmid JI, Matthews RB, Kastner T, Lynd LR, Smith P.  2017.  Total global agricultural land footprint associated with UK food supply 1986-2011. Global Environmental Change. 43:72-81.
Danchin EGJ, Perfus-Barbeoch L, Rancurel C, Thorpe P, Da Rocha M, Bajew S, Neilson R, Sokolova E, Dasilva C, Guy J et al..  2017.  The transcriptomes of xiphinema index and longidorus elongatus suggest independent acquisition of some plant parasitism genes by horizontal gene transfer in early-branching nematodes. Genes. 8:ArticleNo.287.
Fazey I, Moug P, Allen S, Beckman K, Blackwood D, Bonaventura M, Burnett K, Danson M, Fanconer R, Gagnon A et al..  2017.  Transformation in a changing climate: a research agenda. Climate and Development. Published online..
Fazey I, Moug P, Allen S, Beckman K, Blackwood D, Bonaventura M, Burnett K, Danson M, Fanconer R, Gagnon A et al..  2017.  Transformation in a changing climate: a research agenda. Climate and Development. Published online..
Wang EL, Martre P, Zhao ZG, Ewert F, Maiorano A, Rotter RP, Kimball BA, Ottman MJ, Wall GW, White JW et al..  2017.  The uncertainty of crop yield projections is reduced by improved temperature response functions. Nature Plants. 3:ArticleNo.17102.
Erbilgin N, Cale JA, Lusebrink I, Najar A, Klutsch JG, Sherwood P, Bonello P, Evenden ML.  2017.  Water-deficit and fungal infection can differentially affect the production of different classes of defense compounds in two host pines of mountain pine beetle. Tree Physiology. 37:338-350.
2016
Harris NL, Cock PJA, Lapp H, Chapman B, Davey R, Fields C, Hokamp K, Munoz-Torres M.  2016.  The 2015 Bioinformatics Open Source Conference (BOSC 2015). PLoS Computational Biology. 12:e1004691.
Roulston C, Luke GA, de Felipe P, Ruan L, Cope J, Nicholson J, Sukhodub A, Tilsner J, Ryan MD.  2016.  "2A-Like' signal sequences mediating translational recoding: a novel form of dual protein targeting. Traffic. 17:923-939.
Melo P, Graham DJ, Levinson D, Aarabi S.  2016.  Agglomeration, accessibility, and productivity: evidence for urbanized areas in the US. Urban Studies, Published online..
Abarenkov K, Adams RI, Irinyi L, Agan A, Ambrosio E, Antonelli A, Bahram M, Bengtsson-Palme J, Bok G, Cangren P et al..  2016.  Annotating public fungal ITS sequences from the built environment according to the MIxS-Built Environment standard - a report from a May 23-24, 2016 workshop (Gothenburg, Sweden). Mycokeys. 16:1-15.
Loe LE, Hansen BB, Stien A, Albon SD, Bischof R, Carlsson A, Irvine RJ, Meland M, Rivrud IM, Ropstad E et al..  2016.  Behavioral buffering of extreme weather events in a high- Arctic herbivore. Ecosphere. 7:1-13.
Loe LE, Hansen BB, Stien A, Albon SD, Bischof R, Carlsson A, Irvine RJ, Meland M, Rivrud IM, Ropstad E et al..  2016.  Behavioral buffering of extreme weather events in a high- Arctic herbivore. Ecosphere. 7:ArticleNo.e01374..
Lemaire B, Chimphango S, Stirton C, Rafundeen S, Honnay O, Smets E, Chen WM, Sprent JI, James EK, Muasya AM.  2016.  Biogeographical patterns of legume-nodulating Burkholderia spp.: from African Fynbos to continental scales. Applied and Environmental Microbiology. 82:5099-5115.
Liu HT, White PJ, Li CJ.  2016.  Biomass partitioning and rhizosphere responses of maize and faba bean to phosphorus deficiency. Crop and Pasture Science. 67:847-856.
Howland BWA, Stojanovic D, Gordon IJ, Radford J, Manning AD, Lindenmayer DB.  2016.  Birds of a feather flock together: Using trait-groups to understand the effect of macropod grazing on birds in grassy habitats. Biological Conservation. 194:89-99.
Howland BWA, Stojanovic D, Gordon IJ, Radford J, Manning AD, Lindenmayer DB.  2016.  Birds of a feather flock together: using trait-groups to understand the effect of macropod grazing on birds in grassy habitats. Biological Conservation. 194:89-99.
Love AJ, Yu CL, Petukhova NV, Kalinina NO, Chen JP, Taliansky ME.  2016.  Cajal bodies and their role in plant stress and disease responses. RNA Biology. 14:779-790.
Salvadori C, Finlayson J, Trogu T, Formenti N, Lanfranchi P, Citterio C, Palarea-Albaladejo J, Poli A, Chianini F.  2016.  Characterization of immune system cell subsets in fixed tissues from alpine chamois (Rupicapra rupicapra). Journal of Comparative Pathology. 155:207-212.
Lemaire B, Van Cauwenberghe J, Verstraete B, Chimphango S, Stirton C, Honnay O, Smets E, Sprent JI, James EK, Muasya AM.  2016.  Characterization of the papilionoid-Burkholderia interaction in the Fynbos biome: the diversity and distribution of beta-rhizobia nodulating Podalyria calyptrata (Fabaceae, Podalyrieae). Systematic and Applied Microbiology. 39:41-48.
Bainbridge Z, Lewis S, Smithers S, Wilkinson S, Douglas G, Hillier S, Brodie J.  2016.  Clay mineral source tracing and characterisation of Burdekin River (NE Australia) and flood plume fine sediment. Journal of Soils and Sediments. 16:687-706.
Hamel S, Gaillard JM, Yoccoz NG, Albon S, Cote SD, Craine JM, Festa-Bianchet M, Garel M, Lee P, Moss C et al..  2016.  Cohort variation in individual body mass dissipates with age in large herbivores. Ecological Monographs. 86:517-543.
Hamel S, Gillard JM, Yoccoz N, Albon SD, Cote SD, Craine JM, Festa-Blanchet M, Garel M, Lee P, Moss C et al..  2016.  Cohort variation in individual body mass dissipates with age in large herbivores. Ecological Monographs. 86:517-543.
Iannetta PPM, Young M, Bachinger J, Bergkvist G, Lopez-Bellido RJ, Monti M, Pappa VA, Reckling M, Topp CFE, Walker RL et al..  2016.  A comparative nitrogen balance and productivity analysis of legume and non-legume supported cropping systems: the potential role of biological nitrogen fixation. Frontiers in Plant Science. 7:ArticleNo.1700..
Pongrac P, Potisek M, Fras A, Likar M, Budic B, Myszka K, Boros D, Necemer M, Kelemen M, Vavpetic P et al..  2016.  Composition of mineral elements and bioactive compounds in tartary buckwheat and wheat sprouts as affected by natural mineral-rich water. Journal of Cereal Science. 69:9-16.
Lin H, Jin DF, Freitag TE, Sun WC, Yu QG, Fu JR, Ma JW.  2016.  A compositional shift in the soil microbiome induced by tetracycline, sulfamonomethoxine and ciprofloxacin entering a plant-soil system. Environmental Pollution. 212:440-448.
Albon SD, Irvine RJ, Halvorsen O, Langvatn R, Loe LE, Ropstad E, Veiberg V, van der Wal R, Bjorkvoll EM, Duff EI et al..  2016.  Contrasting effects of summer and winter warming on body mass explain population dynamics in a food-limited Arctic herbivore. Global Change Biology. Published online..
Bjorkvoll E, Lee AM, Grotan V, Saether BE, Stien A, Engen S, Albon S, Loe LE, Hansen BB.  2016.  Demographic buffering of life histories? Implications of the choice of measurement scale Ecology. 97:40-47.
Lazarova SS, Brown DJF, Oliveira CMG, Fenton B, MacKenzie K, Wright F, Malloch G, Neilson R.  2016.  Diversity of endosymbiont bacteria associated with a non-filarial nematode group. Nematology. 18:615-623.
Marselle MR, Irvine KN, Lorenzo-Arribas A, Warber SL.  2016.  Does perceived restorativeness mediate the effects of perceived biodiversity and perceived naturalness on emotional well-being following group walks in nature? Journal of Environmental Psychology. 46:217-232.
Zhang RX, Tucker MR, Burton RA, Shirley NJ, Little A, Morris J, Milne L, Houston K, Hedley PE, Waugh R et al..  2016.  The dynamics of transcript abundance during cellularization of developing barley endosperm. Plant Physiology. 170:1549-1565.
Gray N, Lumsdon DG, Hillier S.  2016.  Effect of pH on the cation exchange capacity of some halloysites nanotubes. Clay Minerals. 51:373-383.
Pan FX, Li YY, Chapman SJ, Yao HY.  2016.  Effect of rice straw application on microbial community and activity in paddy soil under different water status. Environmental Science and Pollution Research. 23:5941-5948.
Pan FX, Li YY, Chapman SJ, Yao HY.  2016.  Effect of rice straw application on microbial community and activity in paddy soil under different water status. Environmental Science and Pollution Research. 23:5941-5948.
Lin X, Wang D, Gu S, White PJ, Han K, Zhou J, Jin S.  2016.  Effect of supplemental irrigation on the relationships between leaf ABA concentrations, tiller development and photosynthate accumulation and remobilization in winter wheat. Plant Growth Regulation.. 79:331-343.
Milligan G, Cox ES, Alday JG, Santana VM, McAllister HA, Pakeman RJ, Le Duc MG, Marrs RH.  2016.  The effectiveness of old and new strategies for the long-term control of Pteridium aquilinum, an 8-year test. Weed Research. 56:247-257.
Lin H, Sun WC, Zhang ZL, Chapman SJ, Freitag TE, Fu J, Zhang X, Ma J.  2016.  Effects of manure and mineral fertilization strategies on soil antibiotic resistance gene levels and microbial community in a paddy-upland rotation system. Environmental Pollution. 211:332-337.
Lin H, Sun W, Zhang Z, Chapman SJ, Freitag TE, Fu J, Zhang X, Ma J.  2016.  Effects of manure and mineral fertilization strategies on soil antibiotic resistance gene levels and microbial community in a paddy-upland rotation system. Environmental Pollution. 211:332-337.
Bontemps C, Rogel MA, Wiechmann A, Mussabekova A, Moody S, Simon MF, Moulin L, Elliott GN, Lacercat-Didier L, Dasilva C et al..  2016.  Endemic Mimosa species from Mexico prefer alphaproteobacterial rhizobial symbionts. New Phytologist. 209:319-333.
Lavoie M, Raven JA, Levasseur M.  2016.  Energy cost and putative benefits of cellular mechanisms modulating buoyancy in aflagellate marine phytoplankton. Journal of Phycology. 52:239-251.
Lavoie M, Raven JA, Jones OAH, Qian HF.  2016.  Energy cost of intracellular metal and metalloid detoxification in wild-type eukaryotic phytoplankton. Metallomics. 8:1097-1109.
Villamuelas M, Fernandez N, Albanell E, Galvez-Ceron A, Bartolome J, Mentaberre G, Lopez-Olvera JR, Fernandez-Aguilar X, Colom-Cadena A, Lopez-Martin JM et al..  2016.  The Enhanced Vegetation Index (EVI) as a proxy for diet quality and composition in a mountain ungulate. Ecological Indicators. 61:658-666.
Lea RG, Byers AS, Sumner RN, Rhind SM, Zhang ZL, Freeman SL, Moxon R, Richardson HM, Green M, Craigon J et al..  2016.  Environmental chemicals impact dog semen quality in vitro and may be associated with a temporal decline in sperm motility and increased cryptorchidism. Scientific Reports. 6
Wylie CE, Shaw DJ, Fordyce FM, Lilly A, Pirie RS, McGorum BC.  2016.  Equine grass sickness in Scotland: a case control study of environmental geochemical risk factors. Equine Veterinary Journal. 48:779-785.
Li X, Toma Y, Yeluripati J, Iwasaki S, Bellingrath-Kimura SD, Jones EO, Hatano R.  2016.  Estimating agro-ecosystem carbon balance of northern Japan, and comparing the change in carbon stock by soil inventory and net biome productivity. Science of the Total Environment. 554:293-302.
Peters JC, Harper G, Brierley JL, Lees AK, Wale SJ, Hilton A, Gladders P, Boonham N, Cunnington AC.  2016.  Factors influencing the development of black dot (Colletotrichum coccodes) on potato. Plant Pathology. 65:1484-1491.
Lea RG, Amezaga MR, Loup B, Mandon-Pépin B, Stefansdottir A, Filis P, Kyle C, Zhang ZL, Allen C, Purdie L et al..  2016.  The fetal ovary exhibits temporal sensitivity to a "real-life" mixture of environmental chemicals. Scientific Reports. 6:22279.
Clark LF, Thivierge MC, Kidd CA, McGeoch SC, Abraham P, Pearson DWM, Horgan GW, Holtrop G, Thies F, Lobley GE.  2016.  Fish oil supplemented for 9 months does not improve glycaemic control or insulin sensitivity in subjects with impaired glucose regulation: a parallel randomised controlled trial. British Journal of Nutrition. 115:75-86.
Eves-van den Akker S, Lilley CJ, Yusup HB, Jones JT, Urwin PE.  2016.  Functional C-TERMINALLY ENCODED PEPTIDE (CEP) plant hormone domains evolved de novo in the plant parasite Rotylenchulus reniformis. Molecular Plant Pathology. 17:1265-1275.
Eves-van den Akker S, Laetsch DR, Thorpe P, Lilley CJ, Danchin EGJ, Da Rocha M, Rancurel C, Holroyd NE, Cotton JA, Szitenberg A et al..  2016.  The genome of the yellow potato cyst nematode, Globodera rostochiensis, reveals insights into the basis of parasitism and virulence. Genome Biology. 17
Pyhala A, Fernandez-Llamazares A, Lehvavirta H, Byg A, Ruiz-Mallen I, Salpeteur M, Thorton TF.  2016.  Global environmental change: local perceptions, understandings, and explanations. Ecology and Society. 21:ArticleNo.25.
Currie M, Lackova P, Dinnie E.  2016.  Greenspace matters: exploring links between greenspace, gender and well-being with conservation volunteers. Landscape Research. 41:641-651.
Keefover-Ring K, Rubert-Nason KF, Bennett AE, Lindroth RL.  2016.  Growth and chemical responses of trembling aspen to simulated browsing and ungulate saliva. Journal of Plant Ecology. 9:474-484.
Howland BWA, Stojanovic D, Gordon IJ, Fletcher D, Snape M, Stirnemann IA, Lindenmayer DB.  2016.  Habitat preference of the striped legless lizard: Implications of grazing by native herbivores and livestock for conservation of grassland biota. Austral Ecology. 41:455-464.
Menezes-Blackburn D, Zhang H, Stutter MI, Giles CD, Darch T, George TS, Shand CA, Lumsdon D, Blackwell M, Wearing C et al..  2016.  A holistic approach to understanding the desorption of phosphorus in soils. Environmental Science and Technology. 50:3371-3381.
Prager K, Labarthe P, Caggiano M, Lorenzo-Arribas A.  2016.  How does commercialisation impact on the provision of farm advisory services? Evidence from Belgium, Italy, Ireland and the UK Land Use Policy. 52:329-344.
Mitchell RJ, Pakeman RJ, Broome A, Beaton JK, Bellamy PE, Brooker RW, Ellis CJ, Hester AJ, Hodgetts NG, Iason GR et al..  2016.  How to replicate the functions and biodiversity of a threatened tree species? the case of Fraxinus excelsior in Britain Ecosystems. 19:573-586.
Hoffmann H, Zhao G, Asseng S, Bindi M, Biernath C, Constantin J, Coucheney E, Dechow R, Doro L, Eckersten H et al..  2016.  Impact of spatial soil and climate input data aggregation on regional yield simulations. PLoS ONE. 11:e0151782.
Jost M, Hensel G, Kappel C, Druka A, Sicard A, Hohmann U, Beier S, Himmelbach A, Waugh R, Kumlehn J et al..  2016.  The INDETERMINATE DOMAIN protein BROAD LEAF1 limits barley leaf width by restricting lateral proliferation. Current Biology. 26:903-909.
De Santis C, Martin SAM, Dehler CE, Iannetta PPM, Leeming D, Tocher DR.  2016.  Influence of dietary inclusion of a wet processed faba bean protein isolate on post-smolt Atlantic salmon (Salmo salar). Aquaculture. 465:124-133.
Douhard M, Loe LE, Stien A, Bonenfant C, Irvine RJ, Veiberg V, Ropstad E, Albon SD.  2016.  The influence of weather conditions during gestation on life histories in a wild Arctic ungulate. Proceedings of the Royal Society, B. Published online..
Douhard M, Loe LE, Stien A, Bonenfant C, Irvine RJ, Veiberg V, Ropstad E, Albon SD.  2016.  The influence of weather conditions during gestation on life histories in a wild Arctic ungulate. Proceedings of the Royal Society, B.. 283:ArticleNo.20161760.
Farmer JG, Graham MC, Eades LJ, Lilly A, Bacon JR.  2016.  Influences upon the lead isotopic composition of organic and mineral horizons in soil profiles from the National Soil Inventory of Scotland (2007-09). Science of the Total Environment. 544:730-743.
Jackson-Blake LA, Wade AJ, Futter MN, Butterfield D, Couture RM, Cox BA, Crossman J, Ekholm P, Halliday SJ, Jin L et al..  2016.  The INtegrated CAtchment model of phosphorus dynamics (INCA-P): Description and demonstration of new model structure and equations. Environmental Modelling and Software. 83:356-386.
Cameron AR, Logie L, Patel K, Bacon S, Forteath C, Harthill J, Roberts A, Sutherland CD, Stewart D, Viollet B et al..  2016.  Investigation of salicylate hepatic responses in comparison with chemical analogues of the drug. Biochimica et Biophysica Acta - Molecular Basis of Disease. 1862:1412-1422.
Delgado-Baquerizo M, Giaramida L, Reich PB, Khachane AN, Hamonts K, Edwards C, Lawton LA, Singh BK.  2016.  Lack of functional redundancy in the relationship between microbial diversity and ecosystem functioning. Journal of Ecology. 104:936-946.
Pozsgai G, Baird J, Littlewood NA, Pakeman RJ, Young M.  2016.  Long-term changes in ground beetle (Coleoptera: Carabidae) assemblages in Scotland. Ecological Entomology. 41:157-167.
Pakeman RJ, Alexander J, Brooker R, Cummins R, Fielding D, Gore S, Hewison R, Mitchell R, Moore E, Erford K et al..  2016.  Long-term impacts of nitrogen deposition on coastal plant communities. Environmental Pollution. 221:337-347.
Schillereff DN, Boyle JF, Toberman H, Adams JL, Bryant CL, Chiverrell R, Helliwell RC, Keenan P, Lilly A, Tipping E.  2016.  Long-term macronutrient stoichiometry of UK ombrotrophic peatlands. Science of the Total Environment. 572:1561-1572.
Allinson D, Irvine KN, Edmondson JL, Tiwary A, Hill G, Morris J, Bell M, Davies ZG, Firth SK, Fisher J et al..  2016.  Measurement and analysis of household carbon: the case of a UK city. Applied Energy. 164:871-881.
Pan FX, Li YY, Chapman SJ, Khan S, Yao HY.  2016.  Microbial utilization of rice straw and its derived biochar in a paddy soil. Science of the Total Environment.
Simonsson M, Court M, Bergholm J, Lemarchand D, Hillier S.  2016.  Mineralogy and biogeochemistry of potassium in the Skogaby experimental forest, southwest Sweden: pools, fluxes and K/Rb ratios in soil and biomass. Biogeochemistry. Published online..
Li S, Gilbert L, Harrison PA, Rounsevell MDA.  2016.  Modelling the seasonality of Lyme disease risk and the potential impacts of a warming climate within the heterogeneous landscapes of Scotland. Journal of the Royal Society Interface. 13:ArticleNo.20160140.
Sahi G, Hedley PP, Morris J, Loake GJ, MacFarlane SA.  2016.  Molecular and biochemical examination of spraing disease in potato tuber in response to Tobacco rattle virus infection. Molecular Plant-Microbe Interactions (MPMI). 29:822-828.
Lamichhane JR, Aubertot JN, Begg G, Birch ANE, Boonekamp P, Dachbrodt-Saaydeh S, Hansen JG, Hovmoller MS, Jensen JE, Jorgensen KLNJ et al..  2016.  Networking of integrated pest management: a powerful approach to address common challenges in agriculture. Crop Protection. 89:139-151.
Meijer GJ, Bengough AG, Knappett JA, Loades KW, Nicoll BC.  2016.  New in situ techniques for measuring the properties of root-reinforced soil - laboratory evaluation. Geotechnique. 66:27-40.
Koutsovoulos G, Kumar S, Laetsch DR, Stevens L, Daub J, Conlon C, Maroon H, Thomas F, Aboobaker AA, Blaxter M.  2016.  No evidence for extensive horizontal gene transfer in the genome of the tardigrade Hypsibius dujardini. Proceedings of the National Academy of Sciences of the United States of America. 1135053
Qian MR, Wu HZ, Wang JM, Zhang H, Zhang ZL, Zhang YZ, Lin H, Ma JW.  2016.  Occurrence of trace elements and antibiotics in manure- based fertilizers from the Zhejiang Province of China. Science of the Total Environment. 559:174-181.
Liang X, Kierans M, Ceci A, Hillier S, Gadd GM.  2016.  Phosphatase-mediated bioprecipitation of lead by soil fungi. Environmental Microbiology. 18:219-231.
Houston K, Tucker MR, Chowdhury J, Shirley N, Little A.  2016.  The plant cell wall: a complex and dynamic structure as revealed by the responses of genes under stress conditions. Frontiers in Plant Science. 7
Whybrow S, Stubbs RJ, Johnstone AM, O'Reilly LM, Fuller Z, Livingstone MBE, Horgan GW.  2016.  Plausible self-reported dietary intakes in a residential facility are not necessarily reliable. European Journal of Clinical Nutrition. 70:130-135.
Glibert PM, Wilkerson FP, Dugdale RC, Raven JA, Dupont CL, Leavitt PR, Parker AE, Burkholder JM, Kana TM.  2016.  Pluses and minuses of ammonium and nitrate uptake and assimilation by phytoplankton and implications for productivity and community composition, with emphasis on nitrogen-enriched conditions. Limnology and Oceanography. 61:165-197.
Zhang Y, Thomas CL, Xiang JX, Long Y, Wang XH, Zou J, Luo ZL, Ding GD, Cai HM, Graham NS et al..  2016.  QTL meta-analysis of root traits in Brassica napus under contrasting phosphorus supply in two growth systems. Scientific Reports. 6
Edwards AC, Sinclair AH, Coull MC, Crooks W, Rees RM, Lumsdon DG.  2016.  Regional trends in Scottish advisory soil acidity and phosphorus results: significance of management history, land use and soil attributes. Soil Use and Management. 32:44-53.
Lumsdon DG, Shand CA, Wendler R, Edwards AC, Stutter MI, Richards S, Sinclair AH.  2016.  The relationship between water extractable P and modified Morgan P: results based on data and chemical modelling. Soil Use and Management. 32:162-171.
Lumsdon DG, Shand CA, Wendler R, Edwards AC, Stutter MI, Richards S, Sinclair AH.  2016.  The relationship between water-soluble P and modified Morgan P: results based on data and chemical modelling. Soil Use and Management. 32:162-171.
Brierley JL, Hilton AJ, Wale SJ, Woodhall JW, Lees AK.  2016.  The relative importance of seed- and soil-borne inoculum of Rhizoctonia solani AG-3 in causing black scurf on potato. Potato Research. 59:181-193.
Senapati N, Hulugalle NR, Smith P, Wilson BR, Yeluripati JB, Daniel H, Ghosh S, Lockwood P.  2016.  Response to Letter to the Editor "Comments on "Modelling soil organic carbon storage with RothC in irrigated Vertisols under cotton cropping systems in the sub-tropics" (Nimai Senapati, Nilantha R. Hulugalle, Pete Smith, Brian R. Wilson, Jagadeesh B. Soil and Tillage Research. 155:535-539.
Hoskin SO, Bremner DM, Holtrop G, Lobley GE.  2016.  Responses in whole-body amino acid kinetics to an acute, sub-clinical endotoxin challenge in lambs. British Journal of Nutrition. 115:576-584.
Eigenbrode SD, Birch ANE, Lindzey S, Meadow R, Snyder WE.  2016.  Review: A mechanistic framework to improve understanding and applications of push-pull systems in pest management. Journal of Applied Ecology. 53:202-212.
Bengough AG, Loades KW, McKenzie BM.  2016.  Root hairs aid soil penetration by anchoring the root surface to pore walls. Journal of Experimental Botany. 67:1071-1078.
Beckert MR, Smith P, Lilly A, Chapman SJ.  2016.  Soil and tree biomass carbon sequestration potential of silvopastoral and woodland pasture systems in North East Scotland. Agroforestry Systems. 90:371-383.
Li YY, Wang J, Pan FX, Chapman SJ, Yao HY.  2016.  Soil nitrogen availability alters rhizodeposition carbon flux into the soil microbial community. Journal of Soils and Sediments. 16:1472-1480.
Cheng YH, Jiang Y, Wu Y, Valentine TA, Li HX.  2016.  Soil nitrogen status modifies rice root response to nematode-bacteria interactions in the rhizosphere. PLoS ONE. 11
Gonzalez J, Luque S, Poggio L, Smith R, Gimona A.  2016.  Spatial Bayesian belief networks as a planning decision tool for mapping ecosystem services trade-offs on multifunctional forested landscapes. Environmental Research. 144:15-26.
Bailey M, Srivastava A, Conti L, Nelis S, Zhang CJ, Florance H, Love A, Milner J, Napier R, Grant M et al..  2016.  Stability of small ubiquitin-like modifier (SUMO) proteases OVERLY TOLERANT TO SALT1 and-2 modulates salicylic acid signalling and SUMO1/2 conjugation in Arabidopsis thaliana. Journal of Experimental Botany. 67:353-363.
Austrheim G, Speed JDM, Evju M, Hester AJ, Holand O, Loe LE, Martinsen V, Mobaek R, Mulder SJH, Thompson DBA et al..  2016.  Synergies and trade-offs between ecosystem services in an alpine ecosystem grazed by sheep - an experimental approach. Basic and Applied Ecology. 17:596-608.
Stocker BD, Prentice IC, Cornell SE, Davies-Barnard T, Finzi AC, Franklin O, Janssens I, Larmola T, Manzoni S, Nasholm T et al..  2016.  Terrestrial nitrogen cycling in earth system models revisited. New Phytologist. 210:1165-1168.
Velmurugan J, Mollison E, Barth S, Marshall D, Milne L, Creevey CJ, Lynch B, Meally H, McCabe M, Milbourne D.  2016.  An ultra-high density genetic linkage map of perennial ryegrass (Lolium perenne) using genotyping by sequencing (GBS) based on a reference shotgun genome assembly. Annals of Botany. 118:71-87.
Lu YW, Yin MY, Wang XD, Chen BH, Yang X, Peng JJ, Zheng HY, Zhao JP, Lin L, Yu CL et al..  2016.  The unfolded protein response and programmed cell death are induced by expression of garlic virus X p11 in Nicotiana benthamiana. Journal of General Virology. 97:1462-1468.
Van Weymers PSM, Baker K, Chen XW, Harrower B, Cooke DEL, Gilroy EM, Birch PRJ, Thilliez GJA, Lees AK, Lynott JS et al..  2016.  Utilizing 'Omic' technologies to identify and prioritize novel sources of resistance to the oomycete pathogen Phytophthora infestans in potato germplasm collections. Frontiers in Plant Science. 7
Wang JM, Lin H, Sun WC, Xia Y, Ma JW, Fu JR, Zhang ZL, Wu HZ, Qian MR.  2016.  Variations in the fate and biological effects of sulfamethoxazole, norfloxacin and doxycycline in different vegetable-soil systems following manure application. Journal of Hazardous Materials, 304, 49-57..
McBean D, Nath M, Lambe N, Morgan-Davies C, Kenyon F.  2016.  Viability of the Happy Factor (TM) targeted selective treatment approach on several sheep farms in Scotland. Veterinary Parasitology. 218:22-30.
McNeil CJ, Hoskin SO, Bremner DM, Holtrop G, Lobley GE.  2016.  Whole-body and splanchnic amino acid metabolism in sheep during an acute endotoxin challenge. British Journal of Nutrition. 116:211-222.
Li S, Gilbert L, Harrison PA, Rounsevell MDA.  2016.  yy Modelling the seasonality of Lyme disease risk and the potential impacts of a warming climate within the heterogeneous landscapes of Scotland. Journal of the Royal Society Interface. 13:ArticleNo.20160140.
2015
Huang Y, Long X, Chapman SJ, Yao HY.  2015.  Acidophilic denitrifiers dominate the N2O production in a 100-year-old tea orchard soil. Environmental Science and Pollution Research. 22:4173-4182.
Hernandez F, Galvez N, Gimona A, Laker J, Bonacic C.  2015.  Activity patterns by two colour morphs of the vulnerable guina, Leopardus guigna (Molina 1782), in temperate forests of southern Chile. Gayana. 79:102-105.
Knierim A, Boenning K, Caggiano M, Cristóvão A, Dirimanova V, Koehnen T, Labarthe P, Prager K.  2015.  The AKIS concept and its relevance in selected EU member states. Outlook on Agriculture.
Shin KH, Yang SH, Lee JY, Lim CW, Lee SC, Brown JWS, Kim SH.  2015.  Alternative splicing of mini-exons in the Arabidopsis leaf rust receptor-like kinase LRK10 genes affects subcellular localisation. Plant Cell Reports. 34:495-505.
Lilly A, Chapman SJ.  2015.  Assessing changes in carbon stocks of Scottish soils: lessons learnt. Earth and Environmental Science. 25:ArticleNo.01201.
Herfindal I, Tremblay JP, Hester AJ, Lande US, Wam HK.  2015.  Associational relationships at multiple spatial scales affect forest damage by moose. Forest Ecology and Management. 348:97-107.
Sheu SY, Chen MH, Liu WYY, Andrews M, James EK, Ardley JK, De Meyer SE, James TK, Howieson JG, Coutinho BG et al..  2015.  Burkholderia dipogonis sp. Nov., isolated from root nodules of Dipogon lignosus in New Zealand and Western Australia. International Journal of Systematic and Evolutionary Microbiology. 65:4716-4723.
Duckett D, Wynne B, Christley RM, Heathwaite AL, Mort M, Austin Z, Wastling JM, Latham SM, Alcock R, Haygarth P.  2015.  Can policy be risk-based? The cultural theory of risk and the case of livestock disease containment Sociologia Ruralis. 55:379-399.
Waylen KA, Martin-Ortega J, Blackstock KL, Brown I, Uribe BEA, Hernández SB, Bertoni MB, Bustos ML, Bayer AXC, Semerena RIE et al..  2015.  Can scenario-planning support community based natural resource management? Experiences from three countries in Latin America Ecology and Society. 20:ArticleNo.28.
Evans DM, Villar N, Littlewood NA, Pakeman RJ, Evans SA, Dennis P, Skartveit J, Redpath SM.  2015.  The cascading impacts of livestock grazing in upland ecosystems: a 10 year experiment. Ecosphere. 6:ArticleNo.42..
Specht A, Gordon IJ, Groves RH, Lambers H, Phinn SR.  2015.  Catalysing transdisciplinary synthesis in ecosystem science and management. Science of the Total Environment. 534:1-3.
Lee JS, Filatova T, Ligmann-Zielinska A, Hassani-Mahmooei B, Stonedahl F, Lorscheid I, Voinov A, Polhill JG, Sun Z, Parker DC.  2015.  The complexities of agent-based modeling output analysis. Journal of Artificial Societies and Social Simulation. 18:ArticleNo.4.
Toberman H, Tipping EW, Boyle JF, Helliwell RC, Lilly A, Henrys PA.  2015.  Dependence of ombrotrophic peat nitrogen on phosphorus and climate. Biogeochemistry. 125:11-20.
Michalet R, Brooker RW, Lortie CJ, Pugnaire FI.  2015.  Disentangling direct and indirect effects of a legume shrub on its understorey community. Oikos. 124:1251-1262.
Loades KW, Bengough AG, Bransby MF, Hallett PD.  2015.  Effect of root age on the biomechanics of seminal and nodal roots of barley (Hordeum vulgare L.) in contrasting soil environments. Plant and Soil. 395:253-261.
Kikvidze Z, Brooker RW, Butterfield BJ, Callaway RM, Cavieres LA, Cook BJ, Lortie CJ, Michalet R, Pugnaire FI, Xiao S et al..  2015.  The effects of foundation species on community assembly: a global study on alpine cushion plant communities. Ecology. 96:2064-2069.

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The James Hutton Research Institute is the result of the merger in April 2011 of MLURI and SCRI. This merger formed a new powerhouse for research into food, land use, and climate change.