Publications list
Filters: First Letter Of Last Name is L [Clear All Filters]
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2011.
A robust statistical method for association-based eQTL analysis. PLoS ONE. 6:e23192.
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2011.
Root responses to cadmium in the rhizosphere: a review. Journal of Experimental Botany. 62:21-37.
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2011.
Sample collection protocol effects on quantification of gene expression in potato leaf tissue. Plant Molecular Biology Reporter. 29:369-378.
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2011.
Soil nitrogen availability is reflected in the bacterial pathway. Pedosphere. 21:26-30.
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2011.
Stability and variability of virulence of Phytophthora infestans assessed in a ring test across European laboratories. Plant Pathology. 60:556-565.
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2011.
Status of feral oilseed rape in Europe: its minor role as a GM impurity and its potential as a reservoir of transgene persistence. Environmental Science and Pollution Research. 18:111-115.
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2011.
Syringyl lignin is unaltered by severe sinapyl alcohol dehydrogenase suppression in tobacco. Plant Cell. 23:4492-4506.
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2011.
Target-specificity of feral pig baits under different conditions in a tropical rainforest. Wildlife Research. 38:370-378.
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2011.
Teladorsagia circumcincta: The transcriptomic response of a multi-drug-resistant isolate to ivermectin exposure in vitro. Experimental Parasitology. 127:351-356.
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2011.
Temporal variation in the sediment permeability of an intertidal sandflat. Marine Ecology Progress Series. 441:49-63.
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2011.
Testing target-specific bait delivery for controlling feral pigs in a tropical rainforest. Ecological Management and Restoration. 12:226-229.
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2011.
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2011.
Trait assembly in plant assemblages and its modulation by productivity and disturance. Oecologia. 167:209-218.
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2011.
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2011.
UK land-use change and its impact on SOC: 1925-2007. Global Biogeochemical Cycles. 25
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2011.
A unified approach to model selection using the likelihood ratio test. Methods in Ecology and Evolution. 2:155-162.
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2011.
Universal criteria for species conservation priorities? Findings from a survey of public views across Europe Biological Conservation. 144:998-1007.
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2011.
Unlocking the barley genome by chromosomal and comparative genomics. Plant Cell. 23:1249-1263.
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2011.
Unusual features of pomoviral RNA movement. Frontiers in Plant Microbe Interactions. 2:259.
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2011.
Using a general index approach to analyse camera-trap abundance indices. Journal of Wildlife Management. 75:1222-1227.
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2011.
Utilisation of the MVA pathway to produce elevated levels of the sesquiterpene alpha copaene in potato tubers. Phytochemistry. 72:2288-2293.
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2011.
Analysis of anthocyanin composition and content contained from grains of the Korean purple rice varieties by liquid chromatography with diode array detection and electrospray ionization/mass spectrometry (LC-DAD-ESI/MS). Korean Journal of International Agriculture. 22:267-272.
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2010.
BAX INHIBITOR-1 is required for full susceptibility of barley to powdery mildew. Molecular Plant-Microbe Interactions. 23:1217-1227.
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2010.
Bioactive berry components: Potential modulators of health benefits. Functional Plant Science and Biotechnology. 4:34-38.
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2010.
Biohydrology: coupling biology and soil hydrology from pores to landscapes preface. Ecohydrology. 3:379-381.
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2010.
A Brassica exon array for whole-transcript gene expression profiling. PLoS One. 5:-e12812.
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2010.
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2010.
Burkholderia species are ancient symbionts of legumes. Molecular Ecology. 19:44-52.
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2010.
Cereal landraces for sustainable agriculture. A review (Review). Agronomy for Sustainable Development. 30:237-269.
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2010.
Closure threat to key museum research facility. Nature. 465:-1005.
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2010.
Comparison of three alternative methods for analysis of equine faecal egg count reduction test data.. Preventive Veterinary Medicine. 93:316-323.
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2010.
Cucumber mosaic virus 2b protein subcellular targets and interactions: Their significance to RNA silencing suppressor activity. Molecular Plant-Microbe Interactions. 23:294-303.
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2010.
Detection of lactobacillic acid in low erucic rapeseed oil - A note of caution when quantifying cyclic fatty acid monomers in vegetable oils. Chemistry and Physics of Lipids. 163:698-702.
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2010.
Diversity of human colonic butyrate-producing bacteria revealed by analysis of the butyryl-CoA:acetate CoA-transferase gene. Environmental Microbiology. 12:304-314.
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2010.
Effect of method of conservation of timothy on endogenous nitrogen flows in lactating dairy cows. Journal of Dairy Science. 93:4252-4261.
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2010.
Estimation of maize canopy properties from remote sensing by inversion of 1-D and 4-D models. Precision Agriculture. 11:319-334.
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2010.
Exploiting induced variation to dissect quantitative traits in barley. Biochemical Society Transactions. 38:683-688.
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2010.
Expression quantitative trait loci analysis in plants. Plant Biotechnology Journal. 8:10-27.
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2010.
F-actin dynamics in Neurospora crassa. Eukaryotic Cell. 9:547-557.
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2010.
Genome sequence of the pea aphid Acyrthosiphon pisum. PLOS Biology. 8:-e1000313.
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2010.
Genome-wide association mapping of morphological traits to candidate gene resolution in the un-sequenced barley genome. Proceedings of the National Academy of Sciences, USA. 107:21611-21616.
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2010.
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2010.
HIGS: Host-induced gene silencing in the obligate biotrophic fungal pathogen Blumeria graminis. Plant Cell. 22:3130-3141.
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2010.
The hydrological response of heavy clay grassland soils to rainfall in south-west England using . Rapid Communications in Mass Spectrometry. 24:475-482.
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2010.
The impact of drought on leaf physiology of Quercus suber L. trees: comparison of an extreme drought event with chronic rainfall reduction. Journal of Experimental Botany. 61:4361-4371.
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2010.
Impact of sulphur fertilisation on crop response to selenium fertilisation. Plant and Soil. 332:31-40.
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2010.
Involvement of the nuclear cap-binding protein complex in alternative splicing in Arabidopsis thaliana.. Nucleic Acids Research. 38:265-278.
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2010.
Maternal and fetal tissue accumulation of selected endocrine disrupting compounds (EDC) following exposure to sewage sludge-treated pastures before or after conception. Journal of Environmental Monitoring. 12:1582-1593.
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2010.
Modelling contact spread of infection in host-parasitoid systems: Vertical transmission of pathogens can cause chaos. Journal of Theoretical Biology. 262:441-451.
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2010.
The N-terminal domain of PMTV TGB1 movement protein is required for nucleolar localization, microtubule association and long-distance movement. Molecular Plant-Microbe Interactions. 23:1486-1497.
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2010.
NAM-1gene polymorphism and grain protein content in Hordeum. Journal of Plant Physiology. 167:497-501.
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2010.
Nodulation and nitrogen fixation by Mimosa spp. in the Cerrado and Caatinga biomes of Brazil. New Phytologist. 186:934-946.
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2010.
Novel chlamydia-like organisms as cause of bovine abortions, UK. Emerging Infectious Diseases. 16:1323-1324.
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2010.
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2010.
Plant-soil feedbacks contribute to an intransitive competitive network that promotes both genetic and species diversity. Journal of Ecology. 99:176-185.
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2010.
Planting density influence on fibrous root reinforcement of soils. Ecological Engineering. 36:276-284. Abstract
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2010.
The prevalence of bovine viral diarrhoea virus infection in beef suckler herds in Scotland. Veterinary Journal. 186:226-231.
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2010.
Regression analysis of spatial data. Ecology Letters. 13:246-264.
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2010.
Regulation of plant gene expression by alternative splicing. Biochemical Society Transactions. 38:667-671.
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2010.
Relative importance of seed-tuber and soilborne inoculum in causing black dot disease of potato. Plant Pathology. 59:693-702.
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2010.
Signaling in induced resistance. Advances in Virus Research. 76:57-121.
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2010.
Spatial and temporal ecology of Scots pine ectomycorrhizas. New Phytologist. 186:755-768.
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2010.
Symptom induction and RNA silencing suppression by the cucumber mosaic virus 2b protein. Plant Signaling & Behaviour. 5:705-708.
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2010.
The twin arginine protein transport pathway exports multiple virulence proteins in the plant pathogen Streptomyces scabies. Molecular Microbiology. 77:252-271.
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2010.
Vegetation impact on the hydrology of an aeolian sandy soil in a continental climate. Ecohydrology. 3:413-420.
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2010.
Are richness patterns of common and rare species equally well explained by environmental variables? Ecography. 34(4):529-539.
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2010.
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2010.
An assessment of the fine sediment dynamics in an upland river system: INCA-Sed modifications and implications for fisheries. The Science of the Total Environment. 408(12):2555-2566.
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2010.
Burkholderia species are ancient symbionts of legumes. Molecular Ecology. 19(1):44-52.
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2010.
Climate information and capacity needs for ecosystem management under a changing climate. Procedia Environmental Sciences. 1:206-227.
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2010.
A comparison of active navigation and passive observation of desktop models of future built environments. Design Studies. 31(5):419-438.
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2010.
Consequences of feasible future agricultural land use change on soil organic carbon stocks and greenhouse gas emissions in Great Britain. Soil Use and Management. 26(4):381-398.
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2010.
Detection of nitrogen deficiency in potato plants using gene expression markers. American Journal of Potato Research. 87(1):50-59.
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2010.
Effects of environmental pollutants on the reproduction and welfare of ruminants. Animal. 4(7):1227-1239.
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2010.
Estimating changes in Scottish soil carbon stocks using ECOSSE. I. Model description and uncertainties. Climate Research. 45:179-192.
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2010.
Estimating changes in Scottish soil carbon stocks using ECOSSE. II. Application. Climate Research. 45:179-192.
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2010.
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2010.
Genetic variation and molecular evolution of endangered Kozlov's pika (Ochotona Koslowi Buchner) based on mitochondrial cytochrome B gene. Polish Journal of Ecology. 58(3):563-568.
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2010.
Grazing across grass: shrub boundaries: Can spatial heterogeneity increase resistance? Agriculture, Ecosystems and Environment. 139(1-2):159-166.
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2010.
How old is the streamwater? Open questions in catchment transit time conceptualization, modelling and analysis Hydrological Processes. 24(12):1745-1754.
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2010.
The identification of priority opportunities for UK nature conservation policy. Journal of Applied Ecology. 47(5):955-965.
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2010.
Impacts of residence time during storage on potential of water saving for grey water recycling system. Water Research. 44(1):267-277.
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2010.
Influence of riparian cover on stream temperatures and the growth of the mayfly Baetis rhodani in an upland stream. Aquatic Ecology. 44(4):669-678.
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2010.
Lifetime exposure to arsenic in residential drinking water in Central Europe. International Archives of Occupational and Environmental Health. 83(5):471-481.
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2010.
LINTUL3, a simulation model for nitrogen-limited situations: applications to rice. European Journal of Agronomy. 32(4):255-271.
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2010.
Long-term drainage for forestry inhibits extracellular phenol oxidase activity in Finnish boreal mire peat. European Journal of Soil Science. 61(6):950-957.
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2010.
Maternal and fetal tissue accumulation of selected endocrine disrupting compounds (EDC) following exposure to sewage sludge-treated pastures before or after conception. Journal of Environmental Monitoring. 12:1582-1593.
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2010.
Nodulation and nitrogen fixation by mimosa spp. In the Cerrado and Caatinga biomes of Brazil. New Phytologist. 186(4):934-946.
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2010.
Open-system chemical behavior in deep Wilcox Group mudstones, Texas Gulf. Marine and Petroleum Geology.. 27(9):1804-1818.
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2010.
Palatability mapping: a koala's eye view of spatial variation in habitat quality. Ecology. 91(11):3165-3176.
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2010.
Pregnant ewes exposed to multiple endocrine disrupting pollutants through sewage sludge-fertilised pasture show an anti-estrogenic effect in their trabecular bone. The Science of the Total Environment. 408:2340-2346.
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2010.
Quantification of effects of season and nitrogen supply on tree belowground carbon transfer. New Phytologist. 187(2):485-493.
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2010.
Regression analysis of spatial data. Ecology Letters. 13(2):246-264.
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2010.
Regression analysis of spatial data. Ecology Letters. 13(2):246-264.
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2010.
Reply to comment on 'Multi-element' signatures of stream sediments and their sources under moderate to low flow conditions. Applied Geochemistry. 25(10):1617-1619.
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2010.
River phosphorus cycling: separating biotic and abiotic uptake during short-term changes in sewage effluent loading. Water Research.. 44(15):4425-4436.
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2010.
Soil carbon balance of rice-based cropping systems of the Indo-Gangetic Plains. Geoderma. 160:143-154.
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2010.
Spatial and temporal ecology of Scots pine ectomycorrhizas. New Phytologist. 186(3):755-768.
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2010.
Stakeholder attitudes to multi-functional forests in Europe. Forests, Trees and Livelihoods. 19(4):341-358.
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2010.
Turnover of labile and recalcitrant soil carbon differ in response to nitrate and ammonium deposition in an ombrotrophic peatland. Global Change Biology. 16(8):2307-2321.
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2010.
The UNITE database for molecular identification of fungi - recent updates and future perspectives. New Phytologist. 186(2):281-285.
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2010.
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2009.
Bacterial chemoattraction towards jasmonate plays a role in the entry of Dickeya dadantii through wounded tissues. Molecular Microbiology. 74:662-671.
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2009.
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2009.
Comparative transcriptomics in the Triticeae. BMC Genomics. 10:-285. Abstract
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2009.
Darwin - a mission to detect and search for life on extrasolar planets. Astrobiology. 9:1-22.
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2009.
Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics. 10:-582.
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2009.
Development and mapping of DArT markers within the Festuca - Lolium complex. BMC Genomics. 10:-473.
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2009.
The development of a PCR-based marker linked to resistance to the blackcurrant gall mite (Cecidophyopsis ribis Acari: Eriophyidae). Theoretical and Applied Genetics. 118:205-211. Abstract
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2009.
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2009.
Ecosystem feedbacks and cascade processes: understanding their role in the responses of Arctic and alpine ecosystems to environmental change. Global Change Biology. 15:1153-1172. Abstract
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2009.
Ectopic 5' splice sites inhibit gene expression by engaging RNA surveillance and silencing pathways in plants. Plant Physiology. 151:955-965.
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2009.
Effect of inulin on the human gut microbiota: stimulation of Bifidobacterium adolescentis and Faecalibacterium prausnitzii. British Journal of Nutrition. 101:541-550.
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2009.
The effect of perceived environmental background on qualitative assessments of pig behaviour. Animal Behaviour. 78:477-484.
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2009.
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2009.
Estimating the annual number of breeding attempts from breeding dates using mixture models. Ecology Letters. 12:1184-1193.
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2009.
Exploiting knowledge of R/Avr genes to rapidly clone a new LZ-NBS-LRR family of late blight resistance genes from potato linkage group IV. Molecular Plant-Microbe Interactions. 22:630-641.
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2009.
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2009.
Failure to transmit scrapie infection by transferring preimplantation embryos from naturally infected donor sheep. Theriogenology. 72:809-816.
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2009.
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2009.
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2009.
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2009.
Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans. Nature. 461:393-398.
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2009.
Identification and characterization of barley RNA-directed RNA polymerases. Biochimica et Biophysica Acta. 1789:375-385.
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2009.
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2009.
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2009.
International Barley Sequencing Consortium - at the threshold of efficient access to the barley genome. Plant Physiology. 149:142-147. Abstract
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2009.
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2009.
Long-term trends in hydro-climatology of a major Scottish mountain river. Science of the Total Environment. 407:4633-4641.
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2009.
Microarray comparative genomic hybridisation analysis incorporating genomic organisation, and application to enterobacterial plant pathogens. PLoS Computational Biology. 5:-e1000473.
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2009.
N2: A potential pitfall for bulk 2H isotope analysis of explosives and other nitrogen-rich compounds by continuous-flow isotope-ratio mass spectrometry. Rapid Communications in Mass Spectrometry. 23:2011-2016.
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2009.
Nitrogen use efficiency. 3. Nitrogen fixation: genes and costs. Annals of Applied Biology. 155:1-13.
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2009.
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2009.
Quantifying potato pathogen DNA in soil. Applied Soil Ecology. 41:234-238.
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2009.
A quantitative polymerase chain reaction assay for the detection of Polyscytalum pustulans, the cause of skin spot disease of potato. Journal of Phytopathology. 157:154-158. Abstract
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2009.
Robust detection and genotyping of single feature polymorphisms from gene expression data. PLoS Computational Biology. 5:-e1000317.
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2009.
The role of the Cucumber mosaic virus 2b protein in viral movement and symptom induction. Molecular Plant-Microbe Interactions. 22:642-654. Abstract
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2009.
The role of weak selection and high mutation rates in nearly neutral evolution. Journal of Theoretical Biology. 257:696-703.
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2009.
Segmenting bacterial and viral DNA sequence alignments with a trans-dimensional phylogenetic factorial hidden Markov model. Journal of the Royal Statistical Society Series C - Applied Statistics. 58:307-327.
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2009.
Shrub encroachment can reverse desertification in semi-arid Mediterranean grasslands. Ecology Letters. 12:930-941. Abstract
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2009.
Stable isotope analysis of white paints and likelihood ratios. Science and Justice. 49:114-119. Abstract
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Thermal infrared imaging of crop canopies for the remote diagnosis and quantification of plant responses to water stress in the field.. Functional Plant Biology. 36:978-989.
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2009.
The transcriptome analysis of barley (Hordeum vulgare L.) using the Affymetrix Barley1 GeneChip. Russian Journal of Genetics. 45:1317-1328.
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2009.
Transcriptome analysis of potato tubers - effects of different agricultural practices. Journal of Agricultural and Food Chemistry. 57:1612-1623. Abstract
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2009.
Unusual long-distance movement strategies of Potato mop-top virus RNAs in Nicotiana benthamiana. Molecular Plant-Microbe Interactions. 22:381-390.
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2009.
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2009.
The application of visual environmental economics in the study of public preference and urban greenspace. Environment and Planning B. 36(2):355-375.
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2009.
Can you be bothered? The role of participant motivation in the valuation of species conservation measures Journal of Environmental Planning and Management. 52(4):519-534.
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2009.
Carbon stocks in Scottish peatlands. Soil Use and Management. 25:105-112.
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2009.
ClassII peroxidase-encoding genes are present in a phylogenetically wide range of ectomycorrhizal fungi. ISME Journal. 3(12):1387-1395.
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2009.
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2009.
Considerations for Scottish soil monitoring in the European context. European Journal of Soil Science. 60(5):833-843.
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2009.
Don't diss integration: A comment on Ricklef's disintegrating communities. American Naturalist.. 174(6):919-927.
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2009.
Dynamic modelling of the response of UK forest soils to changes in acid deposition using the SAFE model. The Science of the Total Environment. 407(21):5605-5619.
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2009.
Effect of fencing and grazing on Kobresia-dominated meadow in the Qinghai-Tibetan Plateau, China. Plant and Soil. 319(1-2):115-126.
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2009.
Effect of inulin on the human gut microbiota: stimulation of Bifidobacterium adolescentis and Faecalibacterium prausnitzii. British Journal of Nutrition. 101(4):541-550.
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2009.
Environmental and spatial characterisation of bacterial community composition in soil to inform sampling strategies. Soil Biology and Biochemistry. 41(11):2292-2298.
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2009.
European bird distributions still show few climate associations. Proceedings of the National Academy of Sciences, USA. 106(16):E41-E43.
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2009.
Exposure to pastures fertilised with sewage sludge disrupts bone tissue homeostasis in sheep. The Science of the Total Environment. 407(7):2200-2208.
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2009.
How does landscape structure influence catchment transit time across different geomorphic provinces? Hydrological Processes. 23(6):945-953.
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2009.
Increased mass of reticulo-rumen tissue and contents with advancing age in Svalbard reindeer. Journal of Zoology. 278(1):15-23.
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2009.
Influence of livestock grazing on meadow pipit foraging behaviour in upland grassland. Basic and Applied Ecology. 10:662-670.
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2009.
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2009.
Isolation and identification of novel microcystin-degrading bacteria. Applied and Environmental Microbiology. 75(21):6924-6928.
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2009.
Isolation of habitat patches limits colonisation by moorland Hemiptera. Journal of Insect Conservation. 13:29-36.
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2009.
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2009.
Long-term trends in hydroclimatology of a Scottish mountain river. The Science of the Total Environment. 407(16):4633-4641.
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2009.
Multi-element signatures of stream sediments and sources under moderate to low flow conditions. Applied Geochemistry. 24(5):800-809.
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2009.
Pathogens in urban wastewaters suitable for reuse. Urban Water Journal. 6(4):291-301.
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2009.
Pathogens in urban wastewaters suitable for reuse. Urban Water Journal. 6(4):291-301.
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2009.
Quantifying terrestrial carbon stocks: examining the spatial variation in two upland areas in the UK and a comparison to mapped estimates of soil carbon. Soil Use and Management. 25(3):320-332.
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2009.
Relative climatic, edaphic and management controls of plant functional trait signatures. Journal of Vegetation Science. 20(1):148-159.
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2009.
Spatial distribution of sporocarps of stipitate hydnoid fungi and their belowground mycelium. FEMS Microbiology Ecology. 69(3):344-352.
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2009.
Spatial modelling of nitrous oxide emissions at the national scale by upscaling using soil, climate and land use information. Global Change Biology. 15:2321-2332.
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2009.
Spatial variability in properties affecting organic horizon carbon storage in upland soils. Soil Science Society of America Journal.. 73(5):1724-1732.
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2009.
The UK Environmental Change Network: Emerging trends in the composition of plantand animal communities and the physical environment. Biological Conservation. 142(12):2814-2832.
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2009.
Vegetated buffer strips can lead to increased release of phosphorus to waters: A biogeochemical assessment of the mechanisms. Environmental Science and Technology. 43(6):1858-1863.
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2009.
Plant-parasitic nematode feeding tubes and plugs: new perspectives on function. Nematology. 17:1-9.
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2009.
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2008.
Acute toxicity of high doses of the glycoalkaloids, . Journal of Agricultural and Food Chemistry. 56:8753-8760. Abstract
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2008.
Alternative splicing in plants. Biochemical Society Transactions. 36:508-510.
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2008.
Barley adaptation and improvement in the Mediterranean basin. Plant Breeding. 127:554-560.
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2008.
Bursaphelenchus xylophilus: opportunities in comparative genomics and molecular host-parasite interactions (Review). Molecular Plant Pathology. 9:357-368. Abstract
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2008.
Cereal breeding takes a walk on the wild side. Trends in Genetics. 24:24-32. Abstract
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2008.
Characterisation of Fusarium sp. responsible for causing dry rot of potato in Great Britain. Plant Pathology. 57:262-271. Abstract
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2008.
Contribution of gut microbial lysine to liver and milk amino acids in lactating does. British Journal of Nutrition. 100:977-983.
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2008.
DsbA plays a critical and multifaceted role in the production of secreted virulence factors by the phytopathogen, Erwinia carotovora subsp. atroseptica. Journal of Biological Chemistry. 283:23739-23753. Abstract
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2008.
Evaluation of a survey approach to estimating the prevalence of cattle carrying antimicrobial-resistant Escherichia coli. Veterinary Journal. 175:416-418. Abstract
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2008.
The evolution of inorganic carbon concentrating mechanisms in photosynthesis. Philosophical Transactions of the Royal Society of London B - Biological Sciences. 363:2641-2650. Abstract
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2008.
Exploiting regulatory variation to identify genes underlying quantitative resistance to the wheat stem rust pathogen Puccinia graminis f. sp. tritici in barley. Theoretical and Applied Genetics. 117:261-272. Abstract
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2008.
FTIR spectroscopy can be used as a screening tool for organic matter quality in regenerating cutover peatlands. Soil Biology & Biochemistry. 40:515-527. Abstract
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2008.
Gene expression profiling during asexual development of the late blight pathogen Phytophthora infestans reveals a highly dynamic transcriptome. Molecular Plant-Microbe Interaction. 21:433-447. Abstract
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2008.
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2008.