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2014
Makarov VV, Love AJ, Sinitsyna OV, Makarova SS, Yaminsky IV, Taliansky ME, Kalinina NO.  2014.  "Green" nanotechnologies: synthesis of metal nanoparticles using plants. Acta Naturae. 6:35-44.
Palacio S, Aitkenhead MJ, Escudero A, Montserrat-Marti G, Maestro M, Robertson J.  2014.  Gypsophile chemistry unveiled: Fourier transform infrared (FTIR) spectroscopy provides new insight into plant adaptations to gypsum soils. PLoS ONE. 9:e107285.
Shaw PD, Graham M, Kennedy J, Milne I, Marshall DF.  2014.  Helium: visualization of large scale plant pedigrees. BMC Bioinformatics. 15
Nijnik M, Nijnik, M.; Mather A, Bergsma E, Matthews R.  2014.  Heterogeneity of experts' opinion regarding opinion regarding opportunities and challenges of tackling defrestation in the tropics: a Q methodology application. Mitigation and Adaptation Strategies for Global Change. 19:621-640.
Blackstock KL, Waylen KA, Marshall KM, Dunglinson J.  2014.  Hybridity of representation: insights from river basin management planning in Scotland. Environment and Planning C: Government and Society. 32:549-566.
Tomcynska I, Jupe F, Hein I, Marczewski W, Sliwka J.  2014.  Hypersensitive response to Potato virus Y in potato cultivar Sarpo Mira is conferred by the Ny-Smira gene located on the long arm of chromosome IX. Molecular Breeding. 34:471-480.
Deng H, Ma L, Bandaranayaka N, Qin ZW, Mann G, Kyeremeh K, Yu Y, Shepherd T, Naismith JH, O'Hagan D.  2014.  Identification of fluorinases from Streptomyces sp MA37, Norcardia brasiliensis, and Actinoplanes sp N902-109 by genome mining. ChemBioChem. 15:364-368.
Macdonald CA, Crawley MJ, Wright DJ, Kuczynski J, Robinson L, Knight R, Al-Soud WA, Sorensen SJ, Deng Y, Zhou J et al..  2014.  Identifying qualitative effects of different grazing types on below-ground communities and function in a long-term field experiment. Environmental Microbiology. 17:841-854.
Lewis RJ, Pakeman RJ, Marrs RH.  2014.  Identifying the multi-scale spatial structure of plant community determinants of an important national resource. Journal of Vegetation Science. 25:184-197.
Coleman M, Meier-Augenstein W.  2014.  Ignoring IUPAC guidelines for measurement and reporting of stable isotope abundance values affects us all. Rapid Communications in Mass Spectrometry.
Lu YL, Song S, Wang RS, Liu ZY, Meng J, Sweetman AJ, Jenkins A, Ferrier RC, Li H, Luo W et al..  2014.  Impacts of soil and water pollution on food safety and health risks in China. Environment International. 77:5-15.
Matthews RB, van Noordwijk M, Lambin E, Meyfroidt P, Gupta J, Verchot L, Veldkamp E, Hergoualc'h K.  2014.  Implementing REDD+ (Reducing Emissions from Deforestation and Degradation): evidence on governance, evaluation and impacts from the REDD-ALERT project. Mitigation and Adaptation Strategies for Global Change. 19:907-925.
Schurch NJ, Cole C, Sherstnev A, Song J, Duc C, Storey KG, McLean WHI, Brown SJ, Simpson GG, Barton GJ.  2014.  Improved annotation of 3 ' untranslated regions and complex loci by combination of strand-specific direct RNA sequencing, RNA-Seq and ESTs. PLoS ONE. 9:e94270.
Donn S, Wheatley RE, McKenzie BM, Loades KW, Hallett PD.  2014.  Improved soil fertility from compost amendment increases root growth and reinforcement of surface soil on slopes. Ecological Engineering.. 71:458-465.
Reed MS, Moxey A, Prager K, Hanley N, Skates J, Bonn A, Evans CD, Glenk K, Thomson K.  2014.  Improving the link between payments and the provision of ecosystem services in agri-environment schemes. Ecosystem Services. 9:44-53.
Young JC, Waylen KA, Sarkki S, Albon S, Bainbridge I, Balian E, Edwards D, Davidson J, Fairley R, Margerison C et al..  2014.  Improving the science-policy dialogue to meet the challenges of biodiversity conservation: having a conversation rather than talking at one-another. Biodiversity and Conservation. 23:387-404.
Wu X, Hornyik C, Bayer M, Marshall D, Waugh R, Zhang RX.  2014.  In silico identification and characterization of conserved plant microRNAs in barley. Central European Journal of Biology. 9:841-852.
Fowler PA, Childs AJ, Courant F, Mackenize A, Rhind SM, Antignac JP, Le Bizec B, Filis P, Evans F, Flannigan S et al..  2014.  In utero exposure to cigarette smoke dysregulates human fetal ovarian developmental signalling. Human Reproduction. 29:1471-1489.
Brown EM, Latimer C, Allsopp P, Ternan NG, McMullan G, McDougall GJ, Stewart D, Crozier A, Rowland I, Gill CIR.  2014.  In vitro and in vivo models of colorectal cancer: antigenotoxic activity of berries. Journal of Agricultural and Food Chemistry. 62:3852-3866.
Dockter C, Gruszka D, Braumann I, Druka A, Druka I, Franckowiak J, Gough SP, Janeczko A, Kurowska M, Lundqvist J et al..  2014.  Induced variations in Brassinosteroid genes define barley height and sturdiness, and expand the green revolution genetic toolkit. Plant Physiology. 166:1912-1927.
Canton GJ, Katzer F, Maley SW, Bartley PM, Benavides-Silvan J, Palarea-Albaladejo J, Pang Y, Smith SH, Rocchi MS, Buxton D et al..  2014.  Inflammatory infiltration into placentas of Neospora caninum challenged cattle correlates with clinical outcome of pregnancy. Veterinary Research. 45:11.
van der Wal R, Miller DR, Irvine RJ, Fiorini S, Amar A, Yearley S, Gill R, Dandy N.  2014.  The influence of information provision on people's landscape preferences: a case study on understorey vegetation of deer-browsed woodlands. Landscape and Urban Planning. 124:129-139.
Kaczmarek A, MacKenzie K, Kettle H, Blok VC.  2014.  Influence of soil temperature on Globodera rostochiensis and Globodera pallida. Phytopathologia Mediterranea. 53:396-405.
Peukert S, Griffith BA, Murray PJ, Macleod CJA, Brazier RE.  2014.  Intensive management in grasslands causes diffuse water pollution at the farm scale. Journal of Environmental Quality. 43:2009-2023.
Irvine RJ, Moseley M, Leckie F, Martinez-Padilla, J.; Millan J, Donley D, Miller A, Pound M, Mougeot F.  2014.  Investigating the loss of recruitment potential in red grouse (Lagopus lagopus scoticus): the relative importance of hen mortality, food supply, tick infestation and louping-ill. European Journal of Wildlife Research. 60:313-322.
Hannam KD, Neilsen GH, Neilsen D, Rabie WS, Midwood AJ, Millard P.  2014.  Late-season foliar urea applications can increase berry yeast-assimilable nitrogen in winegrapes (Vitis vinifera L.). American Journal of Enology and Viticulture. 65:89-95.
Edwards P, Pignotti E, Mellish C, Eckhardt A, Ponnamperuma K, Bouttaz T, Philip L, Pangbourne K, Polhill JG, Gotts NM.  2014.  Lessons learnt from the deployment of a semantic virtual research environment. Journal of Web Semantics. 27-28:70-77.
Zhang ZL, Leith C, Rhind SM, Ker C, Osprey M, Kyle C, Coull MC, Thomson C, Green G, Maderova L et al..  2014.  Long term temporal and spatial changes in the distribution of polychlorinated biphenyls and polybrominated diphenyl ethers in Scottish soils. Science of the Total Environment. 468-469:158-164.
Zakharova A, Midwood AJ, Hunt JE, Graham SL, Artz RRE, Turnbull MH, Whitehead D, Millard P.  2014.  Loss of labile carbon following soil disturbance determinded by measurement of respired d¹³CO. Soil Biology and Biochemistry. 68:125-132.
Singh BK, Quince C, Macdonald CA, Khachane A, Thomas N, Abu Al-Soud W, Sorensen SJ, He ZL, White D, Sinclair A et al..  2014.  Loss of microbial diversity in soils is coincident with reductions in some specialized functions. Environmental Microbiology. 16:2408-2420.
Speed JDM, Meisingset EL, Austrheim G, Hester AJ, Mysterud A, Tremblay J, Solberg EJ.  2014.  Low intensities of red deer browing constrain rowan growth in mature boreal forests of western Norway. Ecoscience. 20:311-318.
Baker K, Bayer M, Cook N, Dreizig S, Dhillon T, Russell J, Hedley PE, Morris J, Ramsay L, Colas I et al..  2014.  The low recombining pericentromeric region of barley restricts gene diversity and evolution but not gene expression. The Plant Journal. 79:981-992.
Buccianti A, Nisi B, Martin-Fernandez JA, Palarea-Albaladejo J.  2014.  Methods to investigate the geochemistry of groundwaters with values for nitrogen compounds below the detection limit. Journal of Geochemical Exploration. 141:78-88.
Snell HSK, Robinson D, Midwood AJ.  2014.  Minimising methodological biases to improve the accuracy of partitioning soil respiration using natural abundance 13C. Rapid Communications in Mass Spectrometry. 28:2341-2351.
McIntyre N, Ballard C, Bruen M, Bulygina N, Buytaert W, Cluckie I, Dunn SM, Ehret U, Ewen J, Gelfan A et al..  2014.  Modelling the hydrological impacts of rural land use change. Hydrology Research. 45:737-754.
Helliwell RC, Aherne J, Nisbet TR, MacDougall G, Broadmeadow S, Sample J, Jackson-Blake L, Doughty R.  2014.  Modelling the long-term response of stream water chemistry to forestry in Galloway, Southwest Scotland. Ecological Indicators. 37:396-411.
Viger M, Hancock RD, Miglietta F, Taylor G.  2014.  More plant growth but less plant defence? First global gene expression data for plants grown in soil amended with biochar Global Change Biology Bioenergy. Published online.
Chmielewska B, Janiak A, Karcz J, Guzy-Wrobelska J, Forster BP, Nawrot M, Rusek A, Smyda P, Kedziorski P, Maluszynski M et al..  2014.  Morphological, genetic and molecular characteristics of barley root hair mutants. Journal of Applied Genetics. 55:433-447.
Lisboa FJG, Peres-Neto PR, Chaer GM, Jesus EC, Mitchell RJ, Chapman SJ, Berbara RLL.  2014.  Much beyond Mantel: bringing Procrustes Association metric to the plant and soil ecologist's toolbox. PLoS ONE. 9:e101238.
van Noordwijk M, Matthews RB, Agus F, Farmer J, Verchot L, Hergoualc'h K, Persch S, Tata HL, Khasanah NM, Widayati A et al..  2014.  Mud, muddle and models in the knowledge value-chain to action on tropical peatland conservation. Mitigation and Adaptation Strategies for Global Change. 19:887-905.
Lau MSY, Marion G, Streftaris G, Gibson GJ.  2014.  New model diagnostics for spatio-temporal systems in epidemiology and ecology. Journal of The Royal Society Interface. 11:ArticleNo.20131093..
Ernfors M, Brennan FP, Richards KG, McGeough KL, Griffiths BS, Laughlin RJ, Watson CJ, Philippot L, Grant J, Minet E et al..  2014.  The nitrification inhibitor dicyandiamide increases mineralisation-immobilisation turnover in slurry amended grassland soil. Journal of Agricultural Science. 152:S137-S149.
Michael G, Bahri-Esfahani J, Li QW, Rhee YJ, Wei Z, Fomina M, Liang XJ.  2014.  Oxalate production by fungi: significance in geomycology, biodeterioration and bioremediation. Fungal Biology Reviews. 28:36-55.
Michalet R, Schoeb C, Lortie CJ, Brooker RW, Callaway RM.  2014.  Partitioning net interactions among plants along altitudinal gradients to study community responses to climate change. Functional Ecology. 28:75-86.
Helliwell RC, Aherne J, MacDougall G, Nisbet TR, Lawson D, Cosby BJ, Evans CD.  2014.  Past acidification and recovery of surface waters, soils and ecology in the United Kingdom: Prospects for the future under current deposition and land use protocols. Ecological Indicators. 37:381-395.
Kettle H, Donnelly R, Flint HJ, Marion G.  2014.  pH feedback and phenotypic diversity within bacterial functional groups of the human gut. Journal of Theoretical Biology. 342:62-69.
Pantidos N, Boath A, Lund V, Conner S, McDougall GJ.  2014.  Phenolic-rich extracts from the edible seaweed, Ascophyllum nodosum, inhibit alpha-amylase and alpha-glucosidase: Potential anti-hyperglycemic effects. Journal of Functional Foods. 10:201-209.
Burra DD, Berkowitz O, Hedley PE, Morris J, Resjo S, Levander F, Liljeroth E, Andreasson E, Alexandersson E.  2014.  Phosphite-induced changes of the transcriptome and secretome in Solanum tuberosum leading to resistance against Phytophthora infestans. BMC Plant Biology. 14
Brown SP, Mead AJ, Forgan DH, Raven JA, Cockell CS.  2014.  Photosynthetic potential of planets in 3:2 spin-orbit resonances. International Journal of Astrobiology.
McMinn D, Oreskovic NM, Aitkenhead MJ, Johnston DW, Murtagh S, Rowe DA.  2014.  The physical environment and health-enhancing activity during the school commute: global positioning system, geographical information systems and accelerometry. Geospatial Health. 8:569-572.
Hancock RD, Morris WL, Ducreux LJD, Morris JA, Usman M, Verrall SR, Fuller J, Simpson CG, Zhang R, Hedley PE et al..  2014.  Physiological, biochemical and molecular responses of the potato (Solanum tuberosum L.) plant to moderately elevated temperature. Plant Cell and Environment. 37:439-450.
Ginetti B, Moricca S, Squires JN, Cooke DEL, Ragazzi A, Jung T.  2014.  Phytophthora acerina sp. nov., a new species causing bleeding cankers and dieback of Acer pseudoplatanus trees in planted forests in northern Italy. Plant Pathology. 63:858-876.
King SRF, McLellan H, Boevink PC, Armstrong MR, Bukharova T, Sukarta O, Win J, Kamoun S, Birch PRJ, Banfielda MJ.  2014.  Phytophthora infestans RXLR Effector PexRD2 interacts with Host MAPKKK epsilon to suppress plant immune signaling. The Plant Cell. 26:1345-1359.
Abad ZG, Abad JA, Cacciola SO, Pane A, Faedda R, Moralejo E, Perez-Sierra A, Abad-Campos P, Alvarez-Bernaola LA, Bakonyi J et al..  2014.  Phytophthora niederhauserii sp. nov., a polyphagous species associated with ornamentals, fruit trees and native plants in 13 countries. Mycologia. 106:431-447.
O'Reilly-Wapstra JM, Moore BD, Brewer M, Beaton J, Sim D, Wiggins NL, Iason GR.  2014.  Pinus sylvestris sapling growth and recovery from mammalian browsing. Forest Ecology and Management. 325:18-25.
Gonzalez-Puente M, Campos M, McCall MK, Munoz-Rojas J.  2014.  Places beyond maps; integrating spatial map analysis and perception studies to unravel landscape change in a Mediterranean mountain area (NE Spain). Applied Geography. 52:182-190.
Jaouannet M, Rodriguez PA, Thorpe P, Lenoir CJG, MacLeod R, Escudero-Martinez C, Bos JIB.  2014.  Plant immunity in plant-aphid interactions. Frontiers in Plant Science. 5
Zhang XG, McGeoch SC, Johnstone AM, Holtrop G, Sneddon AA, MacRury SM, Megson IL, Pearson DWM, Abraham P, de Roos B et al..  2014.  Platelet-derived microparticle count and surface molecule expression differ between subjects with and without type 2 diabetes, independently of obesity status. Journal of Thrombosis and Thrombolysis. 37:455-463.
Bewley MA, Naughton M, Preston J, Mitchell A, Holmes A, Marriott HM, Read RC, Mitchell TJ, Whyte MKB, Dockrell DH.  2014.  Pneumolysin activates macrophage lysosomal membrane permeabilization and executes apoptosis by distinct mechanisms without membrane pore formation. mBio. 5:e01710-14.
Mazur SP, Sonsteby A, Wold AB, Foito A, Freitag S, Verrall S, Conner S, Stewart D, Heide OM.  2014.  Post-flowering photoperiod has marked effects on fruit chemical composition in red raspberry (Rubus idaeus). Annals of Applied Biology. 165:454-465.
Henry MK, Tongue SC, Evans J, Webster C, McKendrick IJ, Gunn GJ.  2014.  The potential of chlorhexidine lavage to reduce the shedding of VTEC 0157 from cattle. Cattle Practice. 22:280-280.
Holden NJ, Wright F, MacKenzie K, Marshall J, Mitchell S, Mahajan A, Wheatley R, Daniell TJ.  2014.  Prevalence and diversity of Escherichia coli isolated from a barley trial supplemented with bulky organic soil amendments: green compost and bovine slurry. Letters in Applied Microbiology. 58:205-212.
Gebreegziabher Z, Naik L, Melamu R, Balana BB.  2014.  Prospects and challenges for urban application of biogas installations in Sub-Saharan Africa. Biomass and Bioenergy. 70:130-140.
Bengtsson T, Weighill D, Proux-Wera E, Levander F, Resjo S, Burra DD, Moushib LI, Hedley PE, Liljeroth E, Jacobson D et al..  2014.  Proteomics and transcriptomics of BABA-induced resistance response in potato using a novel functional annotation approach. BMC Genomics. 15
Tondelli A, Francia E, Visioni A, Comadran J, Mastrangelo AM, Akar T, Al-Yassin A, Ceccarelli S, Grando S, Benbelkacem A et al..  2014.  QTLs for barley yield adaptation to Mediterranean environments in the 'Nure' x 'Tremois' biparental population. Euphytica. 197:73-86.
Dallimer M, Tinch D, Hanley N, Irvine KN, Rourquette JR, Warren PH, Maltby L, Gaston KJ, Armsworth PR.  2014.  Quantifying preferences for the natural world using monetary and non-monetary assessments of value. Conservation Biology. 28:404-413.
Kati AN, Mandrioli M, Skouras PJ, Malloch GL, Voudouris CC, Venturelli M, Manicardi GC, Tsitsipis JA, Fenton B, Margaritopoulos JT.  2014.  Recent changes in the distribution of carboxylesterase genes and associated chromosomal rearrangements in Greek populations of the tobacco aphid Myzus persicae nicotianae. Biological Journal of the Linnean Society. 113:455-470.
Vega-Arreguin JC, Jalloh A, Bos JI, Moffett P.  2014.  Recognition of an Avr3a homologue plays a major role in mediating nonhost resistance to Phytophthora capsici in Nicotiana species. Molecular Plant Microbe Interactions. 27:770-780.
Hindle MM, Martin SF, Noordally ZB, van Ooijen G, Barrios-Llerena ME, Simpson TI, Le Bihan T, Millar AJ.  2014.  The reduced kinome of Ostreococcus tauri: core eukaryotic signalling components in a tractable model species. BMC Genomics. 15:640.
Matthews RB, van Noordwijk M.  2014.  Reducing emissions from deforestation and degradation (REDD+): Lessons learnt in Indonesia, Vietnam, Cameroon and Peru. Mitigation and Adaptation Strategies for Global Change. 19
Pedersen S, Andreassen HP, Keith DA, Skarpe C, Dickman CR, Gordon IJ, Crowther MS, McArthur C.  2014.  Relationships between native small mammals and native and introduced large herbivores. Austral Ecology. 39:236-243.
Bradford MA, Wood SA, Bardgett RD, Black HIJ, Bonkowski M, Eggers T, Grayston SJ, Kandeler E, Manning P, Setala H et al..  2014.  Reply to Byrnes et al.: Aggregation can obscure understanding of ecosystem multifunctionality. Proceedings of the National Academy of Sciences of the United States of America. 111:E5491-E5491.
Stam R, Mantelin S, McLellan H, Thilliez G.  2014.  The role of effectors in non host resistance to filamentous plant pathogens. Frontiers in Plant Science. 5
Mitra A, Flynn KJ, Burkholder JM, Berge T, Calbet A, Raven JA, Graneli E, Glibert PM, Hansen PJ, Stoecker DK et al..  2014.  The role of mixotrophic protists in the biological carbon pump. Biogeosciences. 11:995-1005.
Ball BC, Griffiths BS, Topp CFE, Wheatley R, Walker RL, Rees RM, Watson CA, Gordon H, Hallett PD, McKenzie BM et al..  2014.  Seasonal nitrous oxide emissions in field soils under soil management of reduced tillage, compost application or organic farming. Agriculture, Ecosystems and Environment. 189:17-180.
Foereid B, Ward DS, Mahowald N, Paterson E, Lehmann J.  2014.  The sensitivity of carbon turnover in the Community Land Model to modified assumptions about soil processes. Earth Systems Dynamics. 5:211-221.
Ariyadasa R, Mascher M, Nussbaumer T, Schulte D, Frenkel Z, Poursarebani N, Zhou RN, Steuernagel B, Gundlach H, Taudien S et al..  2014.  A sequence-ready physical map of barley anchored genetically by two million single-nucleotide polymorphisms. Plant Physiology. 164:412-423.
Raczynska KD, Stepien A, Kierzkowski D, Kalak M, Bajczyk M, McNicol J, Simpson CG, Szweykowska-Kulinska Z, Brown JWS, Jarmolowski A.  2014.  The SERRATE protein is involved in alternative splicing in Arabidopsis thaliana. Nucleic Acids Research. 42:1224-1244.
Mwirigi J, Balana BB, Mugisha J, Walekhwa P, Melamu R, Nakami S, Makenzi P.  2014.  Socio-economic hurdles to widespread adoption of small-scale biogas digesters in Sub-Saharan Africa : a review. Biomass and Bioenergy. 70:17-25.
White PJ, Crawford J, Alvarez MCD, Moreno RG.  2014.  Soil Management for Sustainable Agriculture 2013. Editorial. Applied and Environmental Soil Science, 2014, Article No. 536825..
Bayer EM, Mongrand S, Tilsner J.  2014.  Specialized membrane domains of plasmodesmata, plant intercellular nanopores. Frontiers in Plant Science. 5
Muller B, Balbi S, Buchmann CM, de Sousa L, Dressler G, Groeneveld J, Klassert CJ, Bao Le Q, Millington JDA, Nolzen H et al..  2014.  Standardized and transparent model descriptionsfor agent-based models - current status and prospects. Environmental Modelling and Software. 55:156-163.
Herwig A, Campbell G, Mayer CD, Boelen A, Anderson RA, Ross AW, Mercer JG, Barrett P.  2014.  A thyroid hormone challenge in hypothyroid rats identifies T3 regulated genes in the hypothalamus and in models with altered energy balance and glucose homeostasis. Thyroid. 24:1575-1593.
Hold GL, Berry S, Saunders KA, Drew J, Mayer C, Brookes H, Gay NJ, El-Omar EM, Bryant CE.  2014.  The TLR4 D299G and T399I SNPs are constitutively active to up-regulate expression of Trif-dependent genes. PLoS ONE. 9:e111460.
McDougall GJ, Conner S, Pereira-Caro G, Gonzalez-Barrio R, Brown EM, Verrall S, Stewart D, Moffet T, Ibars M, Lawther R et al..  2014.  Tracking (poly)phenol components from raspberries in ileal fluid. Journal of Agricultural and Food Chemistry. 62:7631-7641.
McGrann GRD, Stavrinides A, Russell J, Corbitt MM, Booth A, Chartrain L, Thomas WTB, Brown JKM.  2014.  A trade off between mlo resistance to powdery mildew and increased susceptibility of barley to a newly important disease, Ramularia leaf spot. Journal of Experimental Botany. 65:1025-1037.
Elliott RM, de Roos B, Duthie SJ, Bouwman FG, Rubio-Aliaga I, Crosley LK, Mayer C, Polley AC, Heim C, Coort SL et al..  2014.  Transcriptome analysis of peripheral blood mononuclear cells in human subjects following a 36 h fast provides evidence of effects on genes regulating inflammation, apoptosis and energy metabolism. Genes and Nutrition. 9:ArticleNo.432.
Farmer J, Matthews RB, Smith P, Smith JU.  2014.  The tropical peatland plantation-carbon assessment tool: estimating CO2 emissions from tropical peat soils under plantations. Mitigation and Adaptation Strategies for Global Change. 19:863-885.
Russell JR, Hedley PE, Cardle L, Dancey S, Morris J, Booth A, Odee D, Mwaura L, Omondi W, Angaine P et al..  2014.  tropiTree: an NGS-based EST-SSR resource for 24 tropical tree species. PLoS ONE. 9:e102502.
Pimpao RC, Dew T, Figueira ME, McDougall GJ, Stewart D, Ferreira RB, Santos CN, Williamson G.  2014.  Urinary metabolite profiling identifies novel colonic metabolites and conjugates of phenolics in healthy volunteers. Molecular Nutrition and Food Research. 58:1414-1425.
Munoz-Amatriain M, Cuesta-Marcos A, Endelman JB, Comadran J, Bonman JM, Bockelman HE, Chao SM, Russell J, Waugh R, Hayes PM et al..  2014.  The USDA Barley Core Collection: Genetic diversity, population structure, and potential for genome-wide association studies. PLoS ONE. 9:e94688.
Russell J, Hackett C, Hedley P, Lui H, Milne L, Bayer M, Marshall D, Jorgensen L, Gordon S, Brennan R.  2014.  The use of genotyping by sequencing in blackcurrant (Ribes nigrum): developing high-resolution linkage maps in species without reference genome sequences. Molecular Breeding. 33:835-849.
Love AJ, Makarov V, Yaminsky I, Kalinina NO, Taliansky ME.  2014.  The use of tobacco mosaic virus and cowpea mosaic virus for the production of novel metal nanomaterials. Virology. 449:133-139.
Diamanti J, Mazzoni L, Balducci F, Capelletti T, Capocasa F, Battino M, Dobson G, Stewart D, Mezzetti B.  2014.  Use of wild genotypes in breeding program increases strawberry fruit sensorial and nutritional quality. Journal of Agricultural and Food Chemistry. 62:3944-3953.
Lewis RJ, Pakeman RJ, Angus S, Marrs RH.  2014.  Using compositional and functional indicators for biodiversity conservation monitoring of semi-natural grasslands in Scotland. Biological Conservation. 175:82-93.
Martin-Ortega J, Allot TEH, Glenk K, Schaafsma M.  2014.  Valuing water quality improvements from peatland restoration: evidence and challenges. Ecosystem Services. 9:34-43.
Brendel M, Janssen A, Mayer CD, Pauly M.  2014.  Weighted logrank permutation tests for randomly right censored life science data. Scandinavian Journal of Statistics. 41:742-761.
Smith J, Abegaz A, Matthews RB, Subedi M, Orskov ER, Tumwesige V, Smith P.  2014.  What is the potential for biogas digesters to improve soil carbon sequestration in Sub-Saharan Africa? Comparison with other uses of organic residues Biomass and Bioenergy. 70:73-86.
Smith J, Abegaz A, Matthews RB, Subedi M, Orskov ER, Tumwesige V, Smith P.  2014.  What is the potential for biogas digesters to improve soil fertility and crop production in Sub-Saharan Africa? Biomass and Bioenergy. 70:58-72.
Dallimer M, Davies ZG, Irvine KN, Maltby L, Warren PH, Gaston KJ, Armsworth PR.  2014.  What personal and environmental factors determine frequency of urban greenspace use? International Journal of Environmental Research and Public Health. 11:7977-7992.
Puttock A, Dungait JAJ, Macleod CJA, Bol R, Brazier RE.  2014.  Woody plant encroachment into grasslands leads to accelerated erosion of previously stable organic carbon from dryland soils. Journal of Geophysical Research-Biogeosciences. 119:2345-2357.
Boden L, Auty H, Goddard P, Stott A, Ball N, Mellor D.  2014.  Working at the science-policy interface. Veterinary Record. 174:165-167.
Slee B, Brown I, Donnelly D, Gordon IJ, Matthews KB, Towers W.  2014.  The ‘squeezed middle’: identifying and addressing conflicting demands on intermediate quality farmland in Scotland. Land Use Policy. 41:206-216.
2013
Fischer A, Kerezi V, Arroyo B, Mateos-Delibes M, Tadie D, Lowassa A, Skogen K, Figari H.  2013.  (De-) legitimising hunting - discourses over the morality of hunting in Europe and Eastern Africa. Land Use Policy. 32:261-270.
Katayama T, Wilkinson MD, Micklem G, Kawashima S, Yamaguchi A, Nakao M, Yamamoto Y, Okamoto S, Oouchida K, Hong-Woo C et al..  2013.  The 3rd DBCLS BioHackathon: improving life science data integration with Semantic Web technologies. Journal of Biomedical Semantics. 4
Matthews RB, Rivington M, Muhammed S, Newton AC, Hallett PD.  2013.  Adapting crops and cropping systems to future climates to ensure food security: the role of crop modelling. Global Food Security. 2:24-28.
Ramezanian A, Dahlin AS, Campbell CD, Hillier S, Mannerstedt-Fogelfors B, Oborn I.  2013.  Addition of a volcanic rockdust to soils has no observable effects on plant yield and nutrient status or on soil microbial activity. Plant and Soil. 367:419-436.
McCouch S, Baute GJ, Bradeen J, Bramel P, Bretting PK, Buckler E, Burke JM, Charest D, Cloutier S, Cole G et al..  2013.  Agriculture: Feeding the future. Nature. 499:23-24.
Lichner L, Hallett PD, Drongova Z, Czachor H, Kovacik L, Mataix-Solera J, Homolak M.  2013.  Algae influence the hydrophysical parameters of a sandy soil. Catena. 108:58-68.
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Gomez-Limon JA, Martin-Ortega J.  2013.  The economic analysis in the implementation of the water framework directive in Spain. International Journal of River Basin Management. 11:301-310.
Nijnik M, Pajot G, Moffat A, Slee B.  2013.  An economic analysis of the establishment of forest plantations in the United Kingdom to mitigate climatic change. Forest Policy and Economics. 26:34-42.
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Tavares LR, Pimpao R, McDougall G, Stewart D, Ferreira RB, Santos CN.  2013.  Elucidating phytochemical production in Juniperus sp.: seasonality and response to stress situations. Journal of Agricultural and Food Chemistry. 61:4044-4052.
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James MC, Bowman AS, Forbes KJ, Lewis F, McLeod JE, Gilbert L.  2013.  Environmental determinants of Ixodes ricinus ticks and the incidence of Borrelia burgdorferi sensu lato, the agent of Lyme borreliosis, in Scotland. Parasitology. 140:237-246.
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Yu CL, Karlin DG, Lu YW, Wright K, Chen JP, MacFarlane S.  2013.  Experimental and bioinformatic evidence that raspberry leaf blotch emaravirus P4 is a movement protein of the 30K superfamily. Journal of General Virology. 94:2117-2128.
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Roberts D, Majewski E, Sulewski P.  2013.  Farm household interactions with local economies: A comparison of two EU case study areas. Land Use Policy. 31:156-165.
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Tandy S, Brittain S, Grail BM, McLeod CW, Paterson E, Tomos AD.  2013.  Fine scale measurement and mapping of uranium in soil solution in soil and plant-soil microcosms, with special reference to depleted uranium. Plant and Soil. 368:471-482.
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Galvez N, Hernandez F, Laker J, Gilabert H, Petitpas R, Bonacic C, Gimona A, Hester AJ, Macdonald DW.  2013.  Forest cover outside protected areas plays an important role in the conservation of the Vulnerable guina Leopardus guigna. Oryx. 47:251-258.
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Visioni A, Tondelli A, Francia E, Pswarayi A, Malosetti M, Russell J, Thomas W, Waugh R, Pecchioni N, Romagosa I et al..  2013.  Genome-wide association mapping of frost tolerance in barley (Hordeum vulgare L.). BMC Genomics. 14:424.
Bull TJ, Schock A, Sharp JM, Greene M, McKendrick IJ, Sales J, Linedale R, Stevenson K.  2013.  Genomic variations associated with attenuation in Mycobacterium avium subsp paratuberculosis vaccine strains. BMC Microbiology, 13, Article No.11..
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Roe J, Ward Thompson C, Aspinall P, Brewer MJ, Duff EI, Miller DR, Mitchell R, Clow A.  2013.  Green space and stress: evidence from cortisol measures in deprived urban communities. International Journal of Environmental Research and Public Health.
Maffey G, Reed M, Irvine RJ, van der Wal R.  2013.  Habitat monitoring in the wider countryside: A case study on the pursuit of innovation in red deer management. Journal of Environmental Management. 128:779-786.
Shaughnessy LJ, Smith LA, Evans J, Anderson D, Caldow G, Marion G, Low JC, Hutchings MR.  2013.  High prevalence of paratuberculosis in rabbits is associated with difficulties in controlling the disease in cattle. Veterinary Journal. 198:267-270.
Shi L, Shi TX, Broadley MR, White PJ, Long Y, Meng JL, Xu FS, Hammond JP.  2013.  High-throughput root phenotyping screens identify genetic loci associated with root architectural traits in Brassica napus under contrasting phosphate availabilities. Annals of Botany. 112:381-389.
Stam R, Jupe J, Howden AJM, Morris JA, Boevink PC, Hedley PE, Huitema E.  2013.  Identification and characterisation CRN effectors in Phytophthora capsici shows modularity and functional diversity. PLoS ONE. 8:e59517.
Zhang R, Marshall DF, Bryan GJ, Hornyik C.  2013.  Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing. PLoS ONE. 8:e57233.
Oakey H, Shafiei R, Comadran J, Uzrek N, Cullis B, Gomez LD, Whitehead C, McQueen-Mason SJ, Waugh R, Halpin C.  2013.  Identification of crop cultivars with consistently high lignocellulosic sugar release requires the use of appropriate statistical design and modelling. Biotechnology for Biofuels. 6:185.
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Dincheva I, Badjakov I, Kondakova V, Dobson P, McDougall G, Stewart D.  2013.  Identification of the phenolic components in Bulgarian raspberry cultivars by LC-ESI-MSn. International Journal of Agricultural Science Research. 3:127-137.
Moynihan E, Richards K, Ritz K, Tyrrel S, Brennan FP.  2013.  The impact of soil type, biology and temperature on the environmental persistence of non-toxigenic E. coli O157. Biology and Environment: Proceedings of the Royal Irish Academy. 113B:41-46.
Nickbakhsh S, Matthews L, Dent JE, Innocent GT, Arnold ME, Reid SWJ, Kao RR.  2013.  Implications of within-farm transmission for network dynamics: Consequences for the spread of avian influenza. Epidemics. 5:67-76.
Alcon F, Martin-Ortega J, Pedrero F, Alarcon JJ, de Miguel MD.  2013.  Incorporating non-market benefits of reclaimed water into cost-benefit analysis: a case study of irrigated mandarin crops in southern Spain. Water Resources Management. 27:1809-1820.
NicDaeid NN, Jayamana S, Kerr WJ, Meier-Augenstein W, Kemp HF.  2013.  Influence of precursor solvent extraction on stable isotope signatures of methylamphetamine prepared from over-the-counter medicines using the Moscow and hypophosphorous routes. Analytical and Bioanalytical Chemistry. 405:2931-2941.
Imholt C, Soulsby C, Malcolm IA, Hrachowitz M, Gibbins CN, Langan SJ, Tetzlaff D.  2013.  Influence of scale on thermal characteristics in a large montane river basin. River Research Applications. 29:403-419.
Prashar A, Yildiz J, Bryan GJ, McNicol JW, Jones HG.  2013.  Infra-red thermography for high throughput field phenotyping in Solanum tuberosum. PLoS ONE. 8:e65816.
Cook BR, Atkinson M, Chalmers H, Comins L, Cooksley S, Deans N, Fazey I, Fenemor A, Kesby M, Litke S et al..  2013.  Interrogating participatory catchment organisations: cases from Canada, New Zealand, Scotland and the Scottish-English Borderlands. Geographical Journal. 179:234-247.
Longbottom D, Livingstone M, Maley S, van der Zon A, Rocchi M, Wilson K, Wheelhouse N, Dagleish M, Aitchison K, Wattegedera S et al..  2013.  Intranasal infection with Chlamydia abortus induces dose-dependent latency and abortion in sheep. PLoS ONE. 8:e57950.
Gehlot HS, Tak N, Kaushik M, Mitra S, Chen WM, Poweleit N, Panwar D, Poonar N, Parihar R, Tak A et al..  2013.  An invasive Mimosa in India does not adopt the symbionts of its native relatives. Annals of Botany. 112:179-186.
von der Luhe B, Dawson LA, Mayes RW, Forbes SL, Fiedler S.  2013.  Investigation of sterols as potential biomarkers for the detection of pig (S. s. domesticus) decomposition fluid in soils. Forensic Science International. 230:68-73.
Moro M, Fischer A, Czajkowski M, Brennan D, Lowassa A, Naiman LC, Hanley N.  2013.  An investigation using the choice experiment method into options for reducing illegal bushmeat hunting in western Serengeti. Conservation Letters. 6:37-45.
Mickovski SB, Buss K, McKenzie BM, Sokmener B.  2013.  Laboratory study on the potential use of recycled inert construction waste material in the substrate mix for extensive green roofs. Ecological Engineering. 61:706-714.
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The James Hutton Research Institute is the result of the merger in April 2011 of MLURI and SCRI. This merger formed a new powerhouse for research into food, land use, and climate change.