Publications list
Filters: First Letter Of Last Name is O [Clear All Filters]
Genetic and environmental regulation of plant architectural traits and opportunities for pest and disease control in raspberry. Annals of Applied Biology. 165:318-328.
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2014.
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2014.
Genetic diversity in caribou linked to past and future climate change. Nature Climate Change. 4:132-137.
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2013.
Genetic diversity of European populations of the oak fine-root pathogen Phytophthora quercina. Forest Pathology. 35:57-70. Abstract
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2005.
Genetic transformation of barley microspores using anther bombardment. Biotechnology Letters. 30:945-949. Abstract
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2008.
Genetical and comparative genomics of Brassica under altered Ca supply identifies Arabidopsis Ca-transporter orthologs. The Plant Cell. 26:2818-2830.
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2014.
Genome analyses of an aggressive and invasive lineage of the Irish potato famine pathogen. PLoS Pathogens. 8:e1002940.
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2012.
Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans. Nature. 461:393-398.
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2009.
Genome sequence and analysis of the tuber crop potato. Nature. 475:189-195.
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2011.
Genome sequence of the pea aphid Acyrthosiphon pisum. PLOS Biology. 8:-e1000313.
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2010.
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2014.
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2019.
Genome-wide association mapping of morphological traits to candidate gene resolution in the un-sequenced barley genome. Proceedings of the National Academy of Sciences, USA. 107:21611-21616.
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2010.
Genomic insights into the origin of parasitism in the emerging plant pathogen Bursaphelenchus xylophilus. PLoS Pathogens. 7:e1002219.
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2011.
Genomic selection in multi-environment crop trials. G3- Genes Genomes Genetics. 6:1313-1326.
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2016.
A geospatial framework to support integrated biogeochemical modelling in the United Kingdom. Environmental Modelling and Software. 68:219-232.
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2015.
Global change effects on plant communities are magnified by time and the number of global change factors imposed. Proceedings of the National Academy of Sciences of the United States of America (PNAS). :ArticleNo.201819027.
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2019.
Global change effects on plant communities are magnified by time and the number of global change factors imposed. Proceedings of the National Academy of Sciences of the United States of America (PNAS). 116:17867-17873.
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2019.
A global collection of permanent vegetation plots. Journal of Vegetation Science. Journal of Vegetation Science. 33
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2022.
Goat production on a global basis. Small Ruminant Research. 98:9-11.
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2011.
The grain Hardness locus characterized in a diverse wheat panel (Triticum aestivum L.) adapted to the central part of the Fertile Crescent: genetic diversity, haplotype structure, and phylogeny. Molecular Genetics and Genomics. 291:1259-1275.
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2016.
Grazing across grass: shrub boundaries: Can spatial heterogeneity increase resistance? Agriculture, Ecosystems and Environment. 139(1-2):159-166.
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2010.
Guest editorial special issue on payments for forest watershed services. Water Resources and Economics. 28:ArticleNo.100153..
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2019.
High diversity of arbuscular mycorrhizal fungi in a boreal, herb-rich, coniferous forest. New Phytologist. 179:867-876. Abstract
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2008.
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2011.
How can we exploit above-belowground interactions to assist in addressing the challenges of food security? Frontiers in Plant Science: Plant-Microbe Interactions. 4
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2013.
How do small farms contribute to food and nutrition security? Linking small farms, strategies, outcomes in territorial food systems Global Food Security. 26:ArticleNo.100427.
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2020.
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2017.
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2009.
Identification and microbial production of the raspberry phenol Salidroside that is active against Huntington’s Disease. Plant Physiology. 179:969-985.
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2018.
Identification and microbial production of the raspberry phenol Salidroside that is active against Huntington’s Disease. Plant Physiology. 179:969-985.
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2019.
Identification of a fluorometabolite from Streptomyces sp MA37: (2R3S4S)-5-fluoro-2,3,4-trihydroxypentanoic acid. Chemical Science. 6:1414-1419.
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2015.
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2013.
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2014.
The identification of priority opportunities for UK nature conservation policy. Journal of Applied Ecology. 47(5):955-965.
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2010.
Impact analysis of climate data aggregation at different spatial scales on simulated net primary productivity for croplands. European Journal of Agronomy. 88:41-52.
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2017.
The impact of blackcurrant juice on attention, mood and brain wave spectral activity in young healthy volunteers. Nutritional Neuroscience. Published online..
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2018.
The impact of blackcurrant juice on attention, mood and brain wave spectral activity in young healthy volunteers. Nutritional Neuroscience. 22:596-606.
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2019.
Impact of communication infrastructure development on livestock density and forage use under the transhumance system in northern Pakistan. Outlook on Agriculture. 36(1):21-27.
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2007.
Impact of endocrine-disrupting compounds (EDCs) on female reproductive health. Molecular and Cellular Endocrinology. 355:231-239.
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2012.
Impact of warming on CO2 emissions from streams countered by aquatic photosynthesis. Nature Geoscience. 9:758-761.
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2016.
Impacts of exceptional and extreme inter-annual climatic events on the net ecosystem carbon dioxide exchange of a Sitka spruce forest. Agricultural and Forest Meteorology. 184:147-157.
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2014.
Impacts of sheep grazing a complex vegetation mosaic: relating behaviour to vegetation change. Agriculture, Ecosystems and Environment. 124(3-4):219-228.
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2008.
Impacts of the use of nonnative commercial bumble bees for pollinator supplementation in raspberry. Journal of Economic Entomology. 104:107-114.
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2011.
Impacts of warming on the structure and functioning of aquatic communities: individual- to ecosystem-level responses. Chapter 2. Advances in Ecological Research. 47:81-176.
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2012.
The importance of mineral determinations to PROFILE base cation weathering release rates: a case study. Biogeosciences. 16:1903-1920.
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2019.
Improving energy expenditure estimates from wearable devices: A machine learning approach. Journal of Sports Sciences.
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2020.
Improving the science-policy dialogue to meet the challenges of biodiversity conservation: having a conversation rather than talking at one-another. Biodiversity and Conservation. 23:387-404.
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2014.
In situ degradation characteristics as predictors of in vivo digestibility and metabolizable energy values of forages and wheat straw. Journal of Applied Animal Research. 37(1):77-81.
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2010.
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2015.
In utero exposure to cigarette smoke dysregulates human fetal ovarian developmental signalling. Human Reproduction. 29:1471-1489.
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2014.
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2011.
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2020.
Increasing litter diversity reduces variability in a decomposer system. Ecology. 89(9):2657-2664.
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2008.
Indicators of perceived naturalness as drivers of landscape preference. Journal of Environmental Management. 90(1):375-383.
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2009.
Induced variations in Brassinosteroid genes define barley height and sturdiness, and expand the green revolution genetic toolkit. Plant Physiology. 166:1912-1927.
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2014.
The influence of vegetation type, soil properties and precipitation on the composition of soil mite and microbial communities at the landscape scale. Journal of Biogeography. 37(7):1317-1328.
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2010.
Inhibition of acetylcholinesterase by green and white tea and their simulated intestinal metabolites. Food and Function. 3:651-661.
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2012.
Insights into the low temperature adaptation and nutritional flexibility of a soil persistent Escherichia coli. FEMS Microbiology Ecology. 84:75-85.
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2013.
Intact salicylic acid signalling is required for potato defence against the necrotrophic fungus Alternaria solani. Plant Molecular Biology. 104:1-19.
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2020.
An integrated modeling and multicriteria analysis approach to managing nitrate diffuse pollution: 1. Framework and methodology. The Science of the Total Environment. 359(1-3):1-16.
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2006.
An integrated modeling and multicriteria analysis approach to managing nitrate diffuse pollution: 2. A case study for a chalk catchment in England. The Science of the Total Environment. 358(1-3):1-20.
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2006.
Integrating ecosystem markets to coordinate landscapescale public benefits from nature. Published in PLOSONE on 12th Jan 2022. Citation: Reed MS, Curtis T, Gosal A, Kendall H, Andersen SP, Ziv G, et al. (2022) Integrating ecosystem markets to co-ordinate landscape-scale public benefits from nature. PLoS ONE 17(1): e0258334. https://doi.
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2022.
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2010.
Integrating soil quality changes to arable agricultural systems following organic matter addition, or adoption of a ley-arable rotation. Applied Soil Ecology. 46(1):43-53.
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2010.
Integrating stakeholder knowledge through modular cooperative participatory processes for marine spatial planning outcomes (CORPORATES). Ecosystem Services. 44:ArticleNo.101126.
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2020.
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2005.
The interactions of site-specific factors on riparian buffer effectiveness across multiple pollutants: a review. Science of the Total Environment. 798:ArticleNo.149238.
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2021.
The internal domain of hordeivirus movement protein TGB1 forms in vitro filamentous structures.. Biochemistry (Moscow). 75:752-758.
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2010.
An invasive Mimosa in India does not adopt the symbionts of its native relatives. Annals of Botany. 112:179-186.
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2013.
Investigating microbial community structure in soils by physiological, biochemical and molecular fingerprinting methods. European Journal of Soil Science. 57:72-82.
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2006.
An investigation into the fruit firmness properties of some progeny and cultivars of red raspberry (Rubus idaeus). IOSR Journal of Environmental Science, Toxicology and Food Technology. 1:4-12.
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2012.
Irreproducibility in searches of scientific literature: A comparative analysis. Nature Methods. 11:14658-14668.
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2021.
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2019.
Labile and recalcitrant plant fractions are utilised by distinct microbial communities in soil: independent of the presence of roots and mycorrhizal hyphae. Soil Biology and Biochemistry. 40:1103-1113.
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2008.
Landscape metrics and visual topology in the analysis of landscape preference. Environment and Planning B. 35(3):504-520.
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2008.
Landscape-scale control of carbon budget of Lake Simcoe: A process-based modelling approach. International Journal of Great Lakes Research. Published online..
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2010.
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2009.
Lattice Boltzmann method for the fractional advection-diffusion equation. Physical Review E. 93:ArticleNo.043310.
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2016.
Light regulation of chlorophyll and glycoalkaloid biosynthesis during tuber greening of potato S. tuberosum. Frontiers in Plant Science. 11:ArticleNo.753.
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2020.
Long term temporal and spatial changes in the distribution of polychlorinated biphenyls and polybrominated diphenyl ethers in Scottish soils. Science of the Total Environment. 468-469:158-164.
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2014.
Long-term exclusion of plant-inputs to soil reduces the functional capacity of microbial communities to mineralise recalcitrant plant-derived carbon sources. Soil Biology and Biochemistry. 43:1873-1880.
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2011.
Long-term exposure to chemicals in sewage sludge fertilizer alters liver lipid content in females and cancer marker expression in males. Environment International. 124:98-108.
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2019.
Long-term K dynamics in organic and conventional mixed cropping systems as related to management and soil properties. Agriculture, Ecosystems and Environment. 122(4):413-426.
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2007.
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2020.
Low-cost hyperspectral imaging system using a linear variable bandpass filter for agritech applications. Applied Optics. 59:A167-A1754.
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2020.
Major agricultural changes required to mitigate phosphorus losses under climate change. Nature Communications. 8:ArticleNo,161.
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2017.
Major agricultural changes required to mitigate phosphorus losses under climate change. Nature Communications. 8:ArticleNo,161.
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2017.
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2012.
Management options to reduce phosphorus leaching from vegetated buffer strips. Journal of Environmental Quality. 48:322-329.
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2019.
Mapping adaptation of barley to droughted environments. Euphytica. 161:35-45. Abstract
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2008.
Mapping earthworm communities in Europe. Applied Soil Ecology. 97:98-111.
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2015.
Mapping earthworm communities in Europe. Applied Soil Ecology. 97:98-111.
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2016.
Maternal smoking during pregnancy specifically reduces human fetal desert hedgehog gene expression during testis development. Journal of Clinical Endocrinology and Metabolism. 93:619-626. Abstract
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2008.
Maternal smoking during pregnancy specifically reduces human fetal Desert hedgehog gene expression during testis development. Journal of Clinical Endocrinology and Metabolism. 93(2):619-626.
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2008.
Measuring the difference between actual and reported food intakes in the context of energy balance under laboratory conditions. British Journal of Nutrition. 111:2032-2043.
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2014.
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2020.
Metabolomics of prolonged fasting in humans reveals new catabolic markers. Metabolomics. 7:375-387.
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2011.
Metagenomic analysis of the gut microbiome of the common black slug arion ater in search of novel lignocellulose degrading enzymes. Frontiers in Microbiology. 9:ArticleNo.2181.
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2017.
A method for uncertainty constraint of catchment discharge and phosphorus load estimates. Hydrological Processes. 32:2779-2787.
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2018.
Microbial and microfaunal communities in phosphorus limited, grazed grassland change composition but maintain homeostatic nutrient stoichiometry. Soil Biology and Biochemistry. 75:94-101.
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2014.
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2015.
Microbial biomass, organic matter mineralization and nitrogen in soils from long-term experimental grassland plots (Palace Leas meadow hay plots, UK). European Journal of Soil Science. 62:95-104.
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2011.
Mineralogical budgeting of potassium in soil: a basis for understanding standard measures of reserve potassium. Journal of Plant Nutrition and Soil Science. 169:605-615.
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2006.
Missing links? The connection between replication and movement of plant RNA viruses Current Opinion in Virology. 2:705-711.
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2012.
Mixed model association scans of multi-environmental trial data reveal major loci controlling yield and yield related traits in Hordeum vulgare in Mediterranean environments. Theoretical and Applied Genetics. 122:1363-1373.
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2011.
Modeling of metal binding in tropical Fluvisols and Acrisols treated with biosolids and wastewater. Chemosphere. 70(8):1338-1346.
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2008.
Modeling soil processes: Review, key challenges, and new perspectives. Vadose Zone Journal. 15
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2016.
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2019.
Modelling the hydrological impacts of rural land use change. Hydrology Research. 45:737-754.
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2014.
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2012.
Molecular barley breeding. Euphytica. 158:295-303. Abstract
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2007.
Molecular characterization of novel Bradyrhizobium strains nodulating ErioSema Chinese and Flemingia vestita, important unexplored native legumes of the sub-Himalayan region (Meghalaya) of India. Systematic and Applied Microbiology. 40:334-344.
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2017.
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2015.
Molecular identification of two stubby root nematode species. American Journal of Potato Research. 84:161-167. Abstract
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2007.
Molecular techniques and classical taxonomy on plant-parasitic nematodes diagnosis. Annual Review of Plant Pathology. 19:309-336.
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2011.
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2016.
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2016.
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2012.
Monitoring the arsenic and iodine exposure of seaweed-eating North Ronaldsay sheep from the gestational and suckling periods to adulthood by using horns as a dietary archive. Environmental Science & Technology. 41:2673-2679. Abstract
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2007.
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2016.
Morphological and molecular diagnostics for plant-parastic nematodes: working together to get the identification done. Tropical Plant Pathology. 36:65-73.
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2011.
Multi-locus sequence types of Campylobacter carried by flies and slugs acquired from local ruminant faeces. Journal of Applied Microbiology. 109(3):829-838.
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2010.
Multiple evolutionary origins of legume traits leading to extreme rhizobial differentiation. New Phytologist. 187:508-520.
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2010.
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2012.
Municipal wastewater as a microbial surveillance platform for enteric diseases: a case study for salmonella and salmonellosis. Environmental Science and Technology. 52:4869-4877.
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2018.
Myocardial and systemic inflammation in acute stress-induced (Takotsubo) cardiomyopathy. Circulation. 129:1581-1592.
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2019.
New live screening of plant-nematode interactions in the rhizosphere. Scientific Reports. 8:ArticleNo.1440.
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2018.
New tools for in vivo fluorescence tagging. Current Opinion in Plant Biology. 8:565-573. Abstract
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2005.
New training to meet the global phosphorus challenge. Environmental Science and Technology. 53:8479-8481.
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2019.
Nodulation of Sesbania species by Rhizobium (Agrobacterium) strain IRBG74 and other Rhizobia. Environmental Microbiology. 11:2510-2525.
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2009.
Nodulation of Sesbania species by Rhizobium (Agrobacterium) strain IRBG74 and other rhizobia. Environmental Microbiology. 11(10):2510-2525.
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2009.
A novel application of natural fluorescence to understand the sources and transport pathways of pollutants from livestock farming in small headwater catchments. Science of the Total Environment. 417:169-182.
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2012.
Novel colon-available triterpenoids identified in raspberry fruits exhibit antigenotoxic activities in vitro. Molecular Nutrition and Food Research. 61:ArticleNo.1600327.
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2017.
A novel grass hybrid to reduce flood generation in temperate regions. Nature Scientific Reports, 3, Article no.1683..
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2013.
The NuGO proof of principle study package: a collaborative research effort of the European Nutrigenomics Organisation. Genes and Nutrition. 3:147-151.
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2008.
Occurrence and distribution of potato pests and diseases in the major potato growing areas in Kenya. Potato Research. 56:325-342.
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2013.
Oceans of opportunity or stormy seas? What does the future hold for developments in European marine policy Philosophical Transactions of the Royal Society of London, A.. 370:5682-5700.
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2012.
Operationalising ecosystem service assessment in bayesian belief networks: Experiences within the OpenNESS project. Ecosystem Services. 29:452-464.
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2017.
Operationalising ecosystem service assessment in bayesian belief networks: Experiences within the OpenNESS project. Ecosystem Services. 29:452-464.
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2018.
Optimal harvesting decision paths when timber and water have an economic value in uneven forests. Forests. 11:ArticleNo.903.
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2020.
Organic matter chemistry controls greenhouse gas emissions from permafrost peatlands. Soil Biology and Biochemistry. 98:42-53.
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2016.
Overriding importance of water table in the greenhouse gas balance of managed peatlands. Nature. Published online.
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2021.
Overview of holistic application of biogas for small scale farmers in Sub-Saharan Africa. Biomass and Bioenergy. 70:4-16.
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2014.
Parallel mircrobial ecology of pasteuira and nematode species in Scottish soils. Frontiers in Plant Science. 10:ArticleNo.1763.
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2020.
Parameter and uncertainty estimation for process-oriented population and distribution models: data, statistics and the niche. Journal of Biogeography. 39:2225-2239.
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2012.
Participatory scenario-planning in place-based social-ecological research: insights and experiences from 23 case studies. Ecology and Society. 20:ArticleNo.34.
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2015.
Participatory wildlife surveys in communal lands: a case study from Simanjiro, Tanzania. African Journal of Ecology. 8(3):727-735.
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2010.
Pathogen enrichment sequencing (PenSeq) enables population genomic studies in oomycetes. New Phytologist. Published online..
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In Press.
Pathogen enrichment sequencing (PenSeq) enables population genomic studies in oomycetes. New Phytologist. 221:1634-1648.
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2019.
Patterns of genetic diversity and linkage disequilibrium in a highly structured Hordeum vulgare association-mapping population for the Mediterranean basin. Theoretical and Applied Genetics. 119:175-187.
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2009.
Payments for Water Ecosystem Services in Latin America: a literature review and conceptual model. Ecosystem Services. 6:122-132.
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2013.
The photoreversible fluorescent protein iLOV outperforms GFP as a reporter of plant virus infection. Proceedings of the National Academy of Sciences, USA. 105:20038-20043. Abstract
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2008.
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2014.
Physiological mechanism of low purine derivative excretion in urine of buffaloes compared with Bos taurus cattle. Animal Production Science. 49(11):994-997.
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2009.
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2018.
Pinus sylvestris sapling growth and recovery from mammalian browsing. Forest Ecology and Management. 325:18-25.
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2014.
Plant cell and biotechnology studies in Linum usitatissimum - a review. Plant Cell, Tissue and Organ Culture. 82:93-103. Abstract
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2005.
Plant parasitic nematode assemblages associated with sweet potato in Kenya and their relationship with environmental variables. Tropical Plant Pathology. 42:1-12.
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2017.
Platelet-derived microparticle count and surface molecule expression differ between subjects with and without type 2 diabetes, independently of obesity status. Journal of Thrombosis and Thrombolysis. 37:455-463.
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2014.
Plausible self-reported dietary intakes in a residential facility are not necessarily reliable. European Journal of Clinical Nutrition. 70:130-135.
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2016.
Policy-driven monitoring and evaluation: does it support adaptive management of socio-ecological systems? Science of the Total Environment. 662:373-384.
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2019.
Pollinator monitoring more than pays for itself. Journal of Applied Ecology.
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2020.
Pollinator monitoring more than pays for itself. Journal of Applied Ecology. 58:44-57.
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2021.
Pollinator-flower interactions in gardens during the COVID19 pandemic lockdown of 2020. Journal of Pollination Ecology.
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2022.
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2021.
Potassium release and fixation as a function of fertilizer application rate and soil parent material. Geoderma. 140(1-2):188-198.
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2007.
Potential environment and public health risk due to contamination of heavy metals from industrial waste water in Lam Thao, Phu Tho, Vietnam. American Journal of Environmental Sciences. 8:71-78.
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2012.
The potential for polyphosphate metabolism in Archaea and anaerobic polyphosphate formation in Methanosarcina mazei. Scientific Reports. 9:ArticleNo.17101.
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2019.
The potential of runoff attenuation features as a Natural Flood Management approach. Journal of Flood Risk Management.. 13:ArticleNo.e12565.
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2020.
Predicting dates of head initiation and yields of broccoli crops grown throughout Scotland. European Journal of Agronomy. 116:ArticleNo.126055..
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2020.
Predicting the severity of the grass pollen season and the effect of climate change in Northwest Europe. Science Advances. 7:ArticleNo.eabd7658.
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2021.
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2012.
Pregnant ewes exposed to multiple endocrine disrupting pollutants through sewage sludge-fertilised pasture show an anti-estrogenic effect in their trabecular bone. The Science of the Total Environment. 408:2340-2346.
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2010.
Preparing interdisciplinary leadership for a sustainable future. Sustainability Science..
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2020.
Prepubertal gonadotropin-releasing hormone analog leads to exagerrated behavioral and emotional sex differences in sheep. Hormones and Behavior. 59:22-27.
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2011.
Process-based principles for restoring river ecosystems. BioScience. 60(3):209-222.
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2010.
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2009.
Protection of ewes against Teladorsagia circumcincta infection in the periparturient period by vaccination with recombinant antigens. Veterinary Parasitology. 228:130-136.
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2016.
A proteomic and targeted metabolomic approach to investigate change in Lolium perenne roots when challenged with glycine. Journal of Experimental Botany. 58(7):1581-1590.
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2007.
Public evaluation of landscape content and change: Several examples from Europe. Land Use Policy. 26:77-86.
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2008.
Putative household outbreaks of campylobacteriosis typically comprise single MLST genotypes. Epidemiology and Infection. 138:1744-1747.
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2010.
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2006.
Quantifying and mitigating wind-induced undercatch in rainfall measurements. Water Resources Research. 54:3863-3875.
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2018.
Quantifying the grazing impacts associated with different herbivores on rangelands. Journal of Applied Ecology. 44:1176-1187. Abstract
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2007.
Quantifying turnover in biodiversity of British breeding birds. Journal of Applied Ecology. 53:469-478.
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2015.
Quantifying turnover in biodiversity of British breeding birds. Journal of Applied Ecology. 53:469-478.
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2016.
Quantifying uptake rate of potassium from soil in a long-term gras rotation experiment. Plant and Soil. 335(1-2):3-19.
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2010.
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2016.
A randomised controlled trial comparing a dietary antiplatelet, the water-soluble tomato extract Fruitflow, with 75mg aspirin in healthy subjects. European Journal of Clinical Nutritiion. 71:723-730.
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2017.
Ranking the value of germplasm: new oil palm (Elaeis guineensis) breeding stocks as a case study. Annals of Applied Biology. 160:145-156.
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2012.
A rapid diagnostic for detection of Aphelenchoides besseyi and A. fujianensis based on real-time PCR. Plant Disease. 102:519-526.
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2018.
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2015.
The rational simplification of a recombinant cocktail vaccine to control the parasitic nematode Teladorsagia circumcincta. International Journal for Parasitology. 49:257-265.
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2019.
Recent developments in effector biology of filamentous plant pathogens. Cellular Microbiology. 12:705-715.
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2010.
Recovery of biochemical functionality in polluted flood-plain soils: The role of microhabitat differentiation through revegetation and rehabilitation of the river dynamics. Soil Biology & Biochemistry. 40:2088-2097. Abstract
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2008.
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2014.
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2020.
Rejoinder to Comments on Minasny et al., 2017 Soil carbon 4 per mille. Geoderma, 292, 59-86. Geoderma. 309:124-129.
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2018.
Rejoinder to Comments on Minasny et al., 2017 Soil carbon 4 per mille. Geoderma, 292, 59-86. Geoderma. 309:124-129.
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2018.