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O' Lochlainn SE, Fray RG, Hammond JP, King GJ, White PJ, Young SD, Broadley MR.  2011.  Generation of nonvernal-obligate, faster-cycling Noccaea caerulescens lines through fast neutron mutagenesis. New Phytologist. 189:409-414.
O' Lochlainn SE, Bowen HC, Fray RG, Hammond JP, King GJ, White PJ, Graham NS, Broadley MR.  2011.  Tandem quadruplication of HMA4 in the zinc (Zn) and cadmium (Cd) hyperaccumulator Noccaea caerulescens. PLoS ONE. 6:e17814.
O'Brien SH, Webb A, Brewer MJ, Reid JB.  2012.  Use of kernel density estimation and maximum curvature to set Marine Protected Area boundaries: identifying a Special Protection Area for wintering red-throated divers in the UK. Biological Conservation. 156:15-21.
O'Callaghan FE, Neilson R, MacFarlane SA, Dupuy LX.  2019.  Dynamic biospeckle analysis, a new tool for the fast screening of plant nematicide selectivity. Plant Methods. 15:ArticleNo.155.
O'Callaghan FE, Braga RA, Neilson R, MacFarlane SA, Dupuy LX.  2018.  New live screening of plant-nematode interactions in the rhizosphere. Scientific Reports. 8:ArticleNo.1440.
O'Callaghan FE, Neilson R, MacFarlane SA, Dupuy LX.  2019.  Dynamic biospeckle analysis, a new tool for the fast screening of plant nematicide selectivity. Plant Methods. 15:ArticleNo.155.
O'Dochartaigh BEO, MacDonald AM, Griffiths KJ, Lilly A, DeGroote J, Chilton PJ, Hughes AG.  2007.  Assessing the effectiveness of Scotland's groundwater nitrate monitoring network. Quarterly Journal of Engineering Geology and Hydrogeology. 40(4):393-406.
O'Driscoll R, Turicchi J, Hopkins M, Horgan GW, Finlayson G, Stubbs JR.  2020.  Improving energy expenditure estimates from wearable devices: A machine learning approach. Journal of Sports Sciences.
O'Gorman EJ, Olafsson OP, Demars BOL, Friberg N, Gudbergsson G, Hannesdottir ER, Jackson MC, Johansson LS, McLaughlin OB, Olafsson JS et al..  2016.  Temperature effects on fish production across a natural thermal gradient. Global Change Biology. 22:3206-3220.
O'Gorman EJ, Pichler DE, Adams G, Benstead JP, Cohen H, Craig N, Cross WF, Demars BOL, Friberg N, Gisalon GM et al..  2012.  Impacts of warming on the structure and functioning of aquatic communities: individual- to ecosystem-level responses. Chapter 2. Advances in Ecological Research. 47:81-176.
O'Kennedy N, Crosbie L, Song HJ, Zhang X, Horgan G, Duttaroy AK.  2017.  A randomised controlled trial comparing a dietary antiplatelet, the water-soluble tomato extract Fruitflow, with 75mg aspirin in healthy subjects. European Journal of Clinical Nutritiion. 71:723-730.
O'Leary GJ, Christy B, Nuttall J, Huth J, Cammarano D, Stöckle C, Basso B, Shcherbak I, Fitzgerald G, Luo Q et al..  2015.  Response of wheat growth, grain yield and water use to elevated CO2 under a Free Air CO2 Enrichment (FACE) experiment and modelling in a semi-arid environment. Global Change Biology.. 21:2670-2686.
O'Malley-James JT, Cockell CS, Greaves JS, Raven JA.  2014.  Swansong biospheres II: the final signs of life on terrestrial planets near the end of their habitable lifetimes. International Journal of Astrobiology. 13:229-243.
O'Malley-James JT, Greaves JS, Raven JA, Cockell CS.  2013.  Swansong biospheres: refuges for life and novel microbial biospheres on terrestrial planets near the end of their habitable lifetimes. International Journal of Astrobiology. 12:99-112.
O'Reilly-Wapstra J, Iason GR, Thoss V.  2006.  The role of genetic and chemical variation of Pinus sylvestris seedlings in influencing slug herbivory. Oecologia. 152:82-91.
O'Reilly-Wapstra JM, Moore BD, Brewer M, Beaton J, Sim D, Wiggins NL, Iason GR.  2014.  Pinus sylvestris sapling growth and recovery from mammalian browsing. Forest Ecology and Management. 325:18-25.
O'Sullivan JJ, Bradford RA, Bonaiuto M, De Dominicis S, Rotko P, Aaltonen J, Waylen K, Langan SJ.  2012.  Enhancing flood resilience through improved risk communications. Natural Hazards and Earth System Sciences. 12:2271-2282.
Oakey H, Cullis B, Thompson R, Comadran J, Halpin C, Waugh R.  2016.  Genomic selection in multi-environment crop trials. G3- Genes Genomes Genetics. 6:1313-1326.
Oakey H, Shafiei R, Comadran J, Uzrek N, Cullis B, Gomez LD, Whitehead C, McQueen-Mason SJ, Waugh R, Halpin C.  2013.  Identification of crop cultivars with consistently high lignocellulosic sugar release requires the use of appropriate statistical design and modelling. Biotechnology for Biofuels. 6:185.
Obert B, Middlefell-Williams J, Millam S.  2008.  Genetic transformation of barley microspores using anther bombardment. Biotechnology Letters. 30:945-949. Abstract
Obidiegwu JE, Bryan GJ, Jones HG, Prashar A.  2015.  Coping with drought: stress and adaptive responses in potato and perspectives for improvement. Frontiers in Plant Science. 6:ArticleNo.542.
Oborn I, Edwards AC, Hillier S.  2010.  Quantifying uptake rate of potassium from soil in a long-term gras rotation experiment. Plant and Soil. 335(1-2):3-19.
Obraztsova EA, Kalinina NO, Taliansky ME, Gabrenaite-Verkhovskaya R, Makinen K, Yaminsky IV.  2008.  Atomic force microscopy of potato virus A.. Colloid Journal. 70:199-201. Abstract
Ockenden MC, Hollaway MJ, Beven KJ, Collins AL, Evans R, Falloon PD, Forber KJ, Hiscock KM, Kahana R, Macleod CJA et al..  2017.  Major agricultural changes required to mitigate phosphorus losses under climate change. Nature Communications. 8:ArticleNo,161.
Ockenden MC, Deasy CE, Benskin CMH, Beven KJ, Burke S, Collins AL, Evans R, Falloon PD, Forber KJ, Hiscock KM et al..  2016.  Changing climate and nutrient transfers: Evidence from high temporal resolution concentration-flow dynamics in headwater catchments. Science of the Total Environment. 548:325-339.
Ockenden MC, Hollaway MJ, Beven KJ, Collins AL, Evans R, Falloon PD, Forber KJ, Hiscock KM, Kahana R, Macleod CJA et al..  2017.  Major agricultural changes required to mitigate phosphorus losses under climate change. Nature Communications. 8:ArticleNo,161.
Ode A, Fry G, Tveit M, Messager P, Miller D.  2009.  Indicators of perceived naturalness as drivers of landscape preference. Journal of Environmental Management. 90(1):375-383.
Ode A, Miller DR.  2011.  Analysing the relationship between indicators of landscape complexity and preference. Environment and Planning B. 38:24-40.
Ode A, Hagerhall C, Sang N.  2010.  Analysing visual landscape complexity: theory and application. Landscape Research. 35(1):111-131.
Oduse KA, Cullen DW.  2012.  An investigation into the fruit firmness properties of some progeny and cultivars of red raspberry (Rubus idaeus). IOSR Journal of Environmental Science, Toxicology and Food Technology. 1:4-12.
Ö
Öhmark SM, Iason GR, Palo RT.  2015.  Spatially segregated foraging patterns of moose (Alces alces) and mountain hare (Lepus timidus) in a subarctic landscape: different tables in the same restaurant? Canadian Journal of Zoology. 93:391-396.
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Ojea E, Martin-Ortega J.  2015.  Understanding the economic value of water ecosystem services from tropical forests: a systematic review for South and Central America. Journal of Forest Economics. 21:97-106.
Ojea E, Martin-Ortega J, Chiabai A.  2012.  Defining and classifying ecosystem services for economic valuation: the case of forest water services. Environmental Science and Policy. 19-20:1-15.
Ojha A, Tak N, Rathi S, Chouhan B, Rao SR, Barik SK, Joshi SR, Sprent JS, James EK, Gehlot HS.  2017.  Molecular characterization of novel Bradyrhizobium strains nodulating ErioSema Chinese and Flemingia vestita, important unexplored native legumes of the sub-Himalayan region (Meghalaya) of India. Systematic and Applied Microbiology. 40:334-344.
Okagaki RJ, Haaning A, Bilgic H, Heinen S, Druka A, Bayer M, Waugh R, Muehlbauer GJ.  2018.  ELIGULUM-A regulates lateral branch and leaf development in barley. Plant Physiology. 176:2750-2760.
Okamoto H, Ducreux LJM, Allwood JW, Hedley PE, Wright A, Gururajan V, Terry MJ, Taylor MA.  2020.  Light regulation of chlorophyll and glycoalkaloid biosynthesis during tuber greening of potato S. tuberosum. Frontiers in Plant Science. 11:ArticleNo.753.
Okello EJ, McDougall GJ, Kumar S, Seal CJ.  2011.  In vitro protective effects of colon-available extract of Camellia sinensis (tea) against hydrogen peroxide and beta-amyloid (AÔ(1-42) induced cytotoxicity in differentiated PC12 cells. Phytomedicine. 18:691-696.
Okello EJ, Leylabi R, McDougall GJ.  2012.  Inhibition of acetylcholinesterase by green and white tea and their simulated intestinal metabolites. Food and Function. 3:651-661.
Okumah M, Martin-Ortega J, Novo P.  2018.  Effects of awareness on farmers' compliance with diffuse pollution mitigation measures: A conditional process modelling. Land Use Policy. 76:36-45.
Old GH, Naden PS, Granger SJ, Bilotta GS, Brazier RE, Macleod CJA, Krueger T, Bol R, Hawkins JMB, Haygarth P et al..  2012.  A novel application of natural fluorescence to understand the sources and transport pathways of pollutants from livestock farming in small headwater catchments. Science of the Total Environment. 417:169-182.
Oliva R, Win J, Raffaele S, Boutemy L, Bozkurt TO, Chaparro-Garcia A, Segretin ME, Stam R, Schornack S, Cano LM et al..  2010.  Recent developments in effector biology of filamentous plant pathogens. Cellular Microbiology. 12:705-715.
Oliveira CMG, Fenton B, Malloch G, Brown DJF, Neilson R.  2005.  Development of species-specific primers for the ectoparasitic nematode species Xiphinema brevicolle, X. diffusum, X. elongatum, X. ifacolum and X. longicaudatum (Nematoda: Longidoridae) based on ribosomal DNA sequences. Annals of Applied Biology. 146:281-288. Abstract
Oliveira CMG, Ferraz LCCB, Neilson R.  2006.  Xiphinema krugi, species complex or complex of cryptic species? Journal of Nematology. 38:418-428. Abstract
Oliveira CMG, Monteiro AR, Blok VC.  2011.  Morphological and molecular diagnostics for plant-parastic nematodes: working together to get the identification done. Tropical Plant Pathology. 36:65-73.
Oliveira CMG, Neilson R.  2006.  Taxonomy of Longidorid nematodes and dichotomous keys for the identification of Xiphinema and Xiphidorus species recorded in Brazil. Arquivos Instituto Biologico. 73:131-141.
Oliveira CMG, Blok VC, Neilson R, Mroz T, Roberts DM.  2017.  Hydrolysis probe-based PCR for detection of Pratylenchus crenatus, P. neglectus and P. penetrans. Nematology. 19:81-91.
Oliveira CMG, Inomoto MM, Bessi R, Tomazini MDO, Blok VC.  2011.  Molecular techniques and classical taxonomy on plant-parasitic nematodes diagnosis. Annual Review of Plant Pathology. 19:309-336.
de Oliveira Mendes G, Bahri-Esfahani J, Hillier S, George TS, Gadd GM.  2021.  Chemical and physical mechanisms of fungal bioweathering of rock phosphate. Geomicrobiology Journal. 38:384-394.
Oliver DM, Hanley ND, van Niekerk M, Kay D, Heathwaite AL, Rabinovici SJM, Kinzelman JL, Fleming LE, Porter J, Shaikh S et al..  2016.  Molecular tools for bathing water assessment in Europe: balancing social science research with a rapidly developing environmental science evidence-base. Ambio. 45:52-62.
Oliver DM, Hanley ND, van Niekerk M, Kay D, Heathwaite AL, Rabinovici SJM, Kinzelman JL, Fleming LE, Porter J, Shaikh S et al..  2016.  Molecular tools for bathing water assessment in Europe: Balancing social science research with a rapidly developing environmental science evidence-base. Ambio. 45:52-62.
Ollerton J, Trunschke J, Havens K, Landaverde-González P, Keller A, Gilpin A, Rech A, Baronio G, Phillips B, Mackin C et al..  2022.  A systematic review of methods for studying the impacts of outdoor recreation on terrestrial wildlife. Global Ecology and Conservation. 22:ArticleNo.e00917.
Ollerton J, Trunschke J, Havens K, Landaverde-González P, Keller A, Gilpin A, Rech A, Baronio G, Phillips B, Mackin C et al..  2022.  Pollinator-flower interactions in gardens during the COVID19 pandemic lockdown of 2020. Journal of Pollination Ecology.
Omer RM, Hester AJ, Gordon IJ, Swaine MD, Raffique SM.  2006.  Seasonal changes in pasture biomass, production and offtake under the transhumance system in northern Pakistan. Journal of Arid Environments. 67(4):641-660.
Omer RM, Hester AJ, Gordon IJ, Raffique SM, Swaine MD.  2007.  Impact of communication infrastructure development on livestock density and forage use under the transhumance system in northern Pakistan. Outlook on Agriculture. 36(1):21-27.
Omotoso O, McCarty DK, Hillier S, Kleeberg R.  2006.  Results of the 3rd Reynolds Cup contest in quantitative mineral analysis. Clays and Clay Minerals. 54(6):748-760.
Omsjoe EH, Stien A, Irvine RJ, Albon SD, Dahl E, Thoresen SI, Rustad E, Ropstad E.  2009.  Evaluating capture stress and its effects on reproductive success in Svalbard reindeer. Canadian Journal of Zoology. 87(1):73-85.
Oni SK, Dillon PJ, Futter MN.  2010.  Landscape-scale control of carbon budget of Lake Simcoe: A process-based modelling approach. International Journal of Great Lakes Research. Published online..
Oom SP, Hester AJ, Legg CJ.  2010.  Grazing across grass: shrub boundaries: Can spatial heterogeneity increase resistance? Agriculture, Ecosystems and Environment. 139(1-2):159-166.
Oom SP, Sibbald AM, Hester AJ, Miller DR, Legg CJ.  2008.  Impacts of sheep grazing a complex vegetation mosaic: relating behaviour to vegetation change. Agriculture, Ecosystems and Environment. 124(3-4):219-228.
Oono R, Schmitt I, Sprent JI, Denison RF.  2010.  Multiple evolutionary origins of legume traits leading to extreme rhizobial differentiation. New Phytologist. 187:508-520.
Opik M, Metsis M, Daniell TJ, Zobel M, Moora M.  2009.  Large-scale parallel 454 sequencing reveals host ecological group specificity of arbuscular mycorrhizal fungi in a boreonemoral forest. New Phytologist. 184:424-437.
Opik M, Moora M, Zobel M, Saks U, Wheatley RE, Wright F, Daniell TJ.  2008.  High diversity of arbuscular mycorrhizal fungi in a boreal, herb-rich, coniferous forest. New Phytologist. 179:867-876. Abstract
Orfanus T, Bedrna Z, Lichner L, Hallett PD, Knava K, Sebin M.  2008.  Spatial variability of water repellency in pine forest soil. Soil and Water. 3:S123-S129. Abstract
Orlando V, Edwards SG, Neilson R, Prior T, Roberts DM, Back M.  2021.  Comparing the efficiency of six common methods for DNA extraction from root-lesion nematodes (Pratylenchus spp.). Nematology. 23:415-423.
Orlando V, Grove IG, Edwards SG, Prior T, Roberts D, Neilson R, Back M.  2020.  Root-lesion nematodes of potato: current status of diagnostics, pathogenicity and management. Plant Pathology, Published online..
Orman-Ligeza B, Harwood W, Hedley PE, Hinchcliffe A, Macaulay M, Uauy C, Trafford K.  2020.  TRA1: A locus responsible for controlling agrobacterium-mediated transformability in barley. Frontiers in Plant Science. 11:ArticleNo.355.
Oro V, H J, Karanastasi E, Krnjaic S, Krnjaic D, Brown DJF, Neilson R.  2005.  Inter-population variability of Longidorus euonymus Mali and Hooper, 1974 (Nematoda, Dorylaimida) and comment upon the number of juvenile developmental stages. Helminthologia. 42:155-165. Abstract
Orosa B, He Q, Mesmar J, Gilroy EM, McLellan H, Yang CW, Craig A, Bailey M, Zhang CJ, Moore JD et al..  2017.  BTB-BACK domain protein POB1 suppresses immune cell death by targeting ubiquitin E3 ligase PUB17 for degradation. PLoS Genetics. 13:e1006540.
Orr JN, Waugh R, Colas I.  2021.  Ubiquitination in plant meiosis: recent advances and high throughput methods. Frontiers in Plant Science. 12:ArticleNo.667314.
Orr HG, Wilby RL, McKenzie-Hedger M, Brown I.  2008.  Climate change in the uplands: a UK perspective on safeguarding regulatory ecosystem services. Climate Research. 37(1):77-98.
Orr JN, Neilson R, Freitag TE, Roberts DM, Davies KG, Blok VC, Cock PJA.  2020.  Parallel mircrobial ecology of pasteuira and nematode species in Scottish soils. Frontiers in Plant Science. 10:ArticleNo.1763.
Orrell P, Bennett AE.  2013.  How can we exploit above-belowground interactions to assist in addressing the challenges of food security? Frontiers in Plant Science: Plant-Microbe Interactions. 4
Orskov ER.  2012.  Small scale farmers in Asia with an emphasis on livestock. Academic Journal of Kanchanaburi Rajabhat University, August 2012..
Orskov ER.  2011.  Goat production on a global basis. Small Ruminant Research. 98:9-11.
Orskov ER, Anchang KY, Subedi M, Smith J.  2014.  Overview of holistic application of biogas for small scale farmers in Sub-Saharan Africa. Biomass and Bioenergy. 70:4-16.
Ortiz-Rubio MA, Orskov ER, Milne J, Galina HMA.  2007.  Effect of different sources of nitrogen on in situ degradability and feed intake of Zebu cattle fed sugarcane tops (Saccharum officinarum). Animal Feed Science and Technology. 139(3-4):143-158.
van Os H, Andrzejewski S, Bakker E, Barrena I, Bryan GJ, Caromel B, Ghareeb B, Isidore E, De Jong W, van Koert P et al..  2006.  Construction of a 10,000 marker ultradense genetic recombination map of potato: providing a framework for accelerated gene isolation and genomewide physical map. Genetics. 173:1075-1087. Abstract
Osler GHR, Harrison L, Kanashiro DK, Clapperton MJ.  2008.  Soil microarthropod assemblages under different arable crop rotations in Alberta, Canada. Applied Soil Ecology. 38(1):71-78.
Osler GHR, Korycinsk A, Cole L.  2006.  Differences in litter mass change mite assemblage structure on a deciduous forest floor. Ecography. 29(6):811-818.
Osler GHR, Sommerkorn M.  2007.  Towards a complete soil C and N cycle: incorporating the soil fauna. Ecology. 88:1611-1621.
Osler GHR, Cole L, Keith AM.  2006.  Changes in oribatid mite community structure associated with the succession from heather (Calluna vulgaris) moorland to birch (Betula pubescens) woodland. Pedobiologia. 50(4):323-330.
Osterrieder A, Carvalho CM, Latijnhouwers M, Johansen JN, Stubbs C, Botchway S, Hawes CL.  2009.  Fluorescence lifetime imaging of interactions between Golgi tethering factors and small GTPases in plants. Traffic. 10:1034-1046.
Oteros-Rozas E, Martín-López B, Daw TM, Bohensky E, Butler J, Hill R, Martin-Ortega J, Quinlan A, Ravera F, Ruiz-Mallén I et al..  2015.  Participatory scenario-planning in place-based social-ecological research: insights and experiences from 23 case studies. Ecology and Society. 20:ArticleNo.34.
Otto IM, Donges JF, Cremades R, Bhowmik A, Hewitt RJ, Lucht W, Rockstrom J, Allerberger F, McCaffrey M, Doe SSP et al..  2020.  Social tipping dynamics for stabilizing Earth's climate by 2050. Proceedings of the National Academy of Sciences of the United States of America. 117:2354-2365.
Ouellet DR, Berthiaume R, Holtrop G, Lobley GE, Martineau R, Lapierre H.  2010.  Effect of method of conservation of timothy on endogenous nitrogen flows in lactating dairy cows. Journal of Dairy Science. 93:4252-4261.
Ovando P, Beguería S, Campos P.  2019.  Carbon sequestration or water yield? The effect of payments for ecosystem services on forest management decisions in Mediterranean forests Water Resources and Economics. 28:ArticleNo.100119.
Ovando P, Brouwer R.  2019.  A review of economic approaches modeling the complex interactions between forest management and watershed services. Forest Policy and Economics. 100:164-176.
Ovando P, Speich M.  2020.  Optimal harvesting decision paths when timber and water have an economic value in uneven forests. Forests. 11:ArticleNo.903.
Owen E, Daunt F, Moffat C, Elston DA, Wanless S, Thompson P.  2013.  Analysis of fatty acids and fatty alcohols reveals seasonal and sex-specific changes in the diets of seabirds. Marine Biology. 160:987-999.
Owen H, Pearson K, Roberts AMI, Reid A, Russell J.  2019.  Single nucleotide polymorphism assay to distinguish barley (Hordeum vulgare L.) varieties in support of seed certification. Genetic Resources and Crop Evolution. 66:1243-1256.
Owen G, Perks M, Benskin C, Wilkinson ME, Jonczyk J, Quinn PF.  2012.  Monitoring agricultural diffuse pollution through a dense monitoring network in the River Eden Demonstration Test Catchment, Cumbria, UK. Area. 44:443-453.

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The James Hutton Research Institute is the result of the merger in April 2011 of MLURI and SCRI. This merger formed a new powerhouse for research into food, land use, and climate change.