Publications list
Filters: First Letter Of Last Name is O [Clear All Filters]
(Poly)phenol-digested metabolites modulate alpha-synuclein toxicity by regulating proteostasis. Scientific Reports. 8:ArticleNo.6965..
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2018.
(Poly)phenols protect from alpha-synuclein toxicity by reducing oxidative stress and promoting autophagy. Human Molecular Genetics. 24:1717-1732.
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2015.
The 3rd DBCLS BioHackathon: improving life science data integration with Semantic Web technologies. Journal of Biomedical Semantics. 4
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2013.
Absence of Curli in soil-persistent Escherichia coli is mediated by a C-di-GMP signaling defect and suggests evidence of biofilm-independent niche specialization. Frontiers in Microbiology. 9:ArticleNo.1340.
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2018.
Acid-extractable potassium in agricultural soils: Source minerals according by differential and quantitative x-ray diffraction. Journal of Plant Nutrition and Soil Science. 176:407-419.
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2013.
Activity pattern of arctic reindeer in a predator-free environment - no need to keep a daily rhythm. Oecologia. 152(4):617-624.
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2007.
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2013.
Advances in imaging RNA in plants. Trends in Plant Science. 15:196-203.
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2010.
Afforestation for the provision of multiple ecosystem services: a Ukrainian case study. International Journal of Forestry Research, 2012, Article ID 295414, 12pp..
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2012.
African legumes: A vital but under-utilised resource. Journal of Experimental Botany. 61:1257-1265.
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2010.
Albugo candida race diversity, ploidy and host-associated microbes revealed using DNA sequence capture on diseased plants in the field. New Phytologist. Published online..
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In Press.
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2019.
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2019.
Alteration and resilience of the soil microbial community following compost amendment: effects of compost level and compost-borne microbial community. Environmental Microbiology. 8(2):247-257.
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2006.
Alteration of the carbon and nitrogen stable isotope composition of beef by substitution of grass silage with maize silage. Rapid Communications in Mass Spectrometry. 19:1937-1942. Abstract
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2005.
Altered food web structure and C-flux pathways associated with mineralisation of organic amendments to agricultural soil. Applied Soil Ecology. 48:107-116.
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2011.
AMOchar: Amorphous manganese oxide coating of biochar improves its efficiency at removing metal(loid)s from aqueous solutions. Science of the Total Environment. 625:71-78.
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2018.
Analysing the relationship between indicators of landscape complexity and preference. Environment and Planning B. 38:24-40.
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2011.
Analysing visual landscape complexity: theory and application. Landscape Research. 35(1):111-131.
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2010.
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2009.
Analysis of fatty acids and fatty alcohols reveals seasonal and sex-specific changes in the diets of seabirds. Marine Biology. 160:987-999.
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2013.
Application of long-chain alcohols as diet-composition markers in sheep fed on grass-white clover and heather-gorse plant species. Grass and Forage Science. 70:30-43.
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2015.
Application of multiple behaviour change models to identify determinants of farmers' biosecurity attitudes and behaviour. Preventive Veterinary Medicine. 115:61-74.
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2018.
Application of wedge fracture test for texture analysis in boiled Sweetpotato (Ipomoea batatas). African Journal of Food Science. 15:145-151.
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2021.
An Arabidopsis GRIP domain protein locates to the trans-Golgi and binds the small GTPase ARL1. Plant Journal. 44:459-470. Abstract
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2005.
Arbuscular mycorrhizal fungal communities in plant roots are not random assemblages. FEMS Microbiology Ecology. 78:103-115.
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2011.
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2013.
Architecture and permeability of post-cytokinesis plasmodesmata lacking cytoplasmic sleeves. Nature Plants. 3:ArticleNo.17082.
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2017.
Assessing biogas digestate, pot ale, wood ash and rockdust as soil amendments: effects on soil chemistry and microbial community composition. Acta Agriculturae Scandinavica, Section B: Soil and Plant Science.
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2015.
Assessing dietary exposure to cadmium in a metal recycling community in Vietnam: age and gender aspects. Science of the Total Environment. 416:164-171.
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2012.
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2010.
Assessing the effectiveness of Scotland's groundwater nitrate monitoring network. Quarterly Journal of Engineering Geology and Hydrogeology. 40(4):393-406.
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2007.
Assessing the vulnerability of blanket peat to climate change using an ensemble of statistical bioclimatic envelope models. Climate Research. 45:131-150.
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2010.
Assessment and implications of intra-specific and phenological variability in monoterpenes of Scots pine (Pinus sylvestris) foliage. Journal of Chemical Ecology. 33(3):477-491.
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2007.
Association of vegetation and soil mite assemblages with isolated Scots pine trees on a Scottish wet heath. Landscape Ecology. 23(7):861-871.
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2008.
Atmospheric CO2 enrichment and nutrient additions to planted soil increase mineralisation of soil organic matter, but do not alter microbial utilisation of plant and soil C-sources. Soil Biology and Biochemistry. 40(9):2434-2440.
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2008.
Atomic force microscopy of potato virus A.. Colloid Journal. 70:199-201. Abstract
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2008.
BacHBerry: BACterial Hosts for production of Bioactive phenolics from bERRY fruits. Phytochemistry Reviews. 17:291-326.
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2018.
Barley adaptation and improvement in the Mediterranean basin. Plant Breeding. 127:554-560.
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2008.
Barley anther and meiocyte transcriptome dynamics in meiotic prophase I. Frontiers in Plant Science. 11:ArticleNo.619404.
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2021.
Benchmarking plant diversity of Palaearctic grasslands and other open habitats. Journal of Vegetation Science. 32:ArticleNo.e13050.
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2021.
Benefit transfer and spatial heterogeneity of preferences for water quality improvements. Journal of Environmental Management. 106:22-29.
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2012.
Berry-enriched diet in salt-sensitive hypertensive rats: metabolic fate of (poly)phenols and the role of gut microbiota. Nutrients. 11:ArticleNo.2634.
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2019.
Beyond the black box: promoting mathematical collaborations for elucidating interactions in soil ecology. Ecosphere. 10:ArticleNo.e02799.
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2019.
Bioclimatic envelope model of climate change impacts on blanket peatland distribution in Great Britain. Climate Research. 45:151-162.
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2010.
BioHackathon series in 2011 and 2012: penetration of ontology and linked data in life science domains. Journal of Biomedical Semantics. 5
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2014.
Biophysics of the Vadose Zone: from reality to model systems and back again. Vadose Zone Journal. 12
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2013.
Bioprospection of natural sources of polyphenols with therapeutic potential for redox-related diseases. Antioxidants. 9:ArticleNo.789.
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2020.
Biotic modifiers, environmental modulation and species distribution models. Journal of Biogeography. 39:2179-2190.
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2012.
Birch invasion of heather moorland increases nematode diversity and trophic complexity. Soil Biology and Biochemistry. 38(12):3421-3430.
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2006.
A bootstrap estimation scheme for chemical compositional data with nondetects. Journal of Chemometrics. 28:585-599.
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2014.
A Brassica exon array for whole-transcript gene expression profiling. PLoS One. 5:-e12812.
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2010.
Bridging the gap between national and ecosystem accounting application in Andalusian Forests, Spain. Ecological Economics. 157:218-236.
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2019.
BTB-BACK domain protein POB1 suppresses immune cell death by targeting ubiquitin E3 ligase PUB17 for degradation. PLoS Genetics. 13:e1006540.
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2017.
Call for transparency of COVID-19 models. Science. 368:482-483.
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2020.
Can biogas digesters help to reduce deforestation in Africa? Biomass and Bioenergy. 70:87-98.
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2014.
Can macrophyte harvesting from eutrophic water close the loop on nutrient loss from agricultural land? Journal of Environmental Management. 152:210-217.
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2015.
Capacity and willingness of farmers and citizen scientists to monitor crop pollinators and pollination services. Global Ecology and Conservation. 20:ArticleNo.e00781.
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2019.
Carbon dynamics in a model grassland with functionally different soil communities. Functional Ecology. 21(4):690-697.
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2007.
Carbon sequestration or water yield? The effect of payments for ecosystem services on forest management decisions in Mediterranean forests Water Resources and Economics. 28:ArticleNo.100119.
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2019.
The cascading effects of birch on heather moorland: a test for the top-down control of an ecosystem engineer. Journal of Ecology. 95(3):540-554.
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2007.
Causes of differences in urinary excretion of purine derivatives in buffaloes and cattle. Animal Science. 82(3):355-358.
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2006.
Challenges and opportunities for quantifying roots and rhizosphere interactions through imaging and image analysis. Plant, Cell and Environment. 38:1213-1232.
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2015.
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2018.
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2018.
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2008.
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2009.
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2006.
Changing climate and nutrient transfers: Evidence from high temporal resolution concentration-flow dynamics in headwater catchments. Science of the Total Environment. 548:325-339.
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2016.
Characterisation of barley landraces from Syria and Jordan for resistance to rhynchosporium and identification of diagnostic markers for Rrs1Rh4. Theoretical and Applied Genetics. 133:1243-1264.
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2020.
Chemical and physical mechanisms of fungal bioweathering of rock phosphate. Geomicrobiology Journal. 38:384-394.
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2021.
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2005.
Chlorophyll fluorescence and flowering behaviour of annual-fruiting raspberry cultivars under elevated temperature regimes. European Journal of Horticultural Science. 78:193-202.
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2013.
A chromosome conformation capture ordered sequence of the barley genome. Nature. 544:427-433.
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2017.
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2015.
Classifying multi-model wheat yield impact response surfaces showing sensitivity to temperature and precipitation change. Agricultural Systems. 159:209-224.
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2018.
ClassII peroxidase-encoding genes are present in a phylogenetically wide range of ectomycorrhizal fungi. ISME Journal. 3(12):1387-1395.
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2009.
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2009.
Clay mineral type effect on bacterial enteropathogen survival in soil. Science of the Total Environment. 468-469:302-305.
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2014.
Climate change cannot be entirely responsible for soil carbon loss observed in England and Wales, 1978-2003. Global Change Biology. 13(12):2605-2609.
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2007.
Climate change impact and adaptation for wheat protein. Global Change Biology. 25:155-173.
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2019.
Climate change in the uplands: a UK perspective on safeguarding regulatory ecosystem services. Climate Research. 37(1):77-98.
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2008.
Co-occurrence of defensive traits in the potato aphid Macrosiphum euphorbiae. Ecological Entomology. 43:538-542.
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2018.
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2018.
Comparative genetic mapping reveals synteny and collinearity between the American cranberry and diploid blueberry genomes. Molecular Breeding. 38:ArticleNo.9.
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2018.
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2021.
Comparative virulence of Caribbean, Brazilian and European isolates of Toxoplasma gondii. Parasites and Vectors. 12:ArticleNo.104.
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2019.
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2021.
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2018.
A comparison of molecular methods for monitoring soil nematodes and their use as biological indicators. European Journal of Soil Science. 46:319-324.
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2010.
Competition for land. Philosophical Transactions of the Royal Society of London B - Biological Sciences. 365:2941-2957.
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2010.
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2017.
Compositional analysis of Scottish honeys with antimicrobial activity against antibiotic-resistant bacteria reveals novel antimicrobial components. LWT - Food Science and Technology. 79:52-59.
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2017.
Compositional data analysis in time-use epidemiology: what, why, how. International Journal of Environmental Research and Public Health. 17:ArticleNo.2220.
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2020.
Concentrations and geographic distribution of selected organic pollutants in Scottish surface soils. Environmental Pollution. 182:15-27.
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2013.
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2006.
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2014.
Construction of a map-based reference genome sequence for barley, Hordeum vulgare L. Scientific Data. 4:ArticleNo.170044.
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2017.
Construction of a map-based reference genome sequence for barley, Hordeum vulgare L. Scientific Data. 4:ArticleNo.170044.
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2017.
Construction of a SNP and SSR linkage map in autotetraploid blueberry using genotyping by sequencing. Molecular Breeding. 36:ArticleNo.4.
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2016.
Contrasting impacts of afforestation on nitrous oxide and methane emissions. Agricultural and Forest Meteorology. 198:82-93.
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2014.
Control of foliar diseases in barley: towards an integrated approach. European Journal of Plant Pathology. 133:33-73.
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2012.
Coping with drought: stress and adaptive responses in potato and perspectives for improvement. Frontiers in Plant Science. 6:ArticleNo.542.
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2015.
CORINE-based landscape indices weakly correlate with plant species richness in a northern European landscape transect. Landscape Ecology. 24(1):53-64.
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2009.
Crop model improvement reduces the uncertainty of the response to temperature of multi-model ensembles. Field Crops Research. 202:5-20.
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2017.
Crop modelling for integrated assessment of risk to food production from climate change. Environmental Modelling and Software. 72:287-303.
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2015.
Cross-realm assessment of the impact of climate change on species’ abundance trends. Nature Ecology and Evolution. 1:ArticleNo.0067.
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2017.
A cross-taxon analysis of the impact of climate change on abundance trends in central Europe. Biological Conservation. 187:41-50.
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2015.
Current insight into the effectiveness of riparian management, attainment of multiple benefits and potential technical enhancements. Journal of Environmental Quality. 48:236-247.
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2019.
Darwin - a mission to detect and search for life on extrasolar planets. Astrobiology. 9:1-22.
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2009.
Defining and classifying ecosystem services for economic valuation: the case of forest water services. Environmental Science and Policy. 19-20:1-15.
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2012.
Defining and delivering resilient ecological networks: nature conservation in England. Journal of Applied Ecology. Published online..
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2018.
Defining and delivering resilient ecological networks: nature conservation in England. Journal of Applied Ecology. 55:2537-2543.
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2018.
Delivery of macromolecules to plant parasitic nematodes using a tobacco rattle virus vector. Plant Biotechnology Journal. 5:827-834. Abstract
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2007.
Denial of long-term issues with agriculture on tropical peatlands will have devastating consequences. Global Change Biology. 23:977-982.
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2017.
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2015.
Determining the effect of drying time on phosphorus release from agricultural soils under climate change scenarios. Journal of Environmental Quality. 46:1131-1136.
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2017.
Detritivores as indicators of landscape stress and soil degradation. Australian Journal of Experimental Agriculture. 47(4):412-423.
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2007.
Developing tools for long term breeding of blueberry germplasm for UK production. International Journal of Fruit Science. 12:294-303.
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2012.
Development and validation of gas chromatography and real-time quantitative PCR for the quantification of landscape-scale gene flow from varieties of high erucic acid (HEAR) oilseed rape. Journal of the Science of Food and Agriculture. 88:2253-2264. Abstract
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2008.
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2018.
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2005.
Developmental metabolomics to decipher and improve fleshy fruit quality. Advances in Botanical Research. 98
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2021.
Differences in litter mass change mite assemblage structure on a deciduous forest floor. Ecography. 29(6):811-818.
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2006.
Differential effect of arbuscular mycorrhizal fungal communities from ecosystems along management gradient on the growth of forest understorey plant species. Soil Biology & Biochemistry. 41:2141-2146.
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2009.
Digital mapping of peatlands - A critical review. Earth Science Reviews. 196
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2019.
Direct sequencing of Arabidopsis thaliana RNA reveals patterns of cleavage and polyadenylation. Nature Structural and Molecular Biology. 19:845-852.
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2012.
Dissecting price setting efficiency in payments for ecosystem services: A meta-analysis of payments for watershed services in Latin America. Ecosystem Services. 38:ArticleNo.100961.
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2019.
Dissecting price setting efficiency in payments for ecosystem services: A meta-analysis of payments for watershed services in Latin America. Ecosystem Services. 38:ArticleNo.100961.
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2019.
Distinct roles for strigolactones in cyst nematode parasitism of Arabidopsis roots. European Journal of Plant Pathology. 154:129-140.
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2019.
Distribution of calcium (Ca) and magnesium (Mg) in the leaves of Brassica rapa under varying exogenous Ca and Mg supply. Annals of Botany. 109:1081-1089.
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2012.
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2015.
Distributional issues in natural capital accounting: An application to land ownership and ecosystem services in Scotland. Environmental and Resource Economics.
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2021.
Diversity of endosymbiont bacteria associated with a non-filarial nematode group. Nematology. 18:615-623.
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2016.
Do multiple herbivores maintain chemical diversity of Scots pine monoterpenes? Philosophical Transactions of the Royal Society, Series B. 366:1337-1345.
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2011.
Does decadal climate variation influence Wheat and Maize production in the southeast USA? Agricultural Forest Meteorology. 204:1-9.
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2015.
Does soil warming affect the interaction between Pasteuria penetrans and Meloidogyne javanica in tomato plants? Plant Pathology. 67:1777-1783.
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2018.
Downregulation of barley Regulator of Telomere Elongation Helicase 1 alters the distribution of meiotic crossovers. Frontiers in plant science. 12:ArticleNo.745070.
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2021.
The drivers of change for the contribution of small farms to regional food security in Europe. Global Food Security. 26:ArticleNo.100395.
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2020.
DTREEv2, a computer-based support system for the risk assessment of genetically modified plants. New Biotechnology. 31:166-171.
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2014.
Dual effects of plant steroidal alkaloids on Saccharomyces cerevisiae. Antimicrobial Agents and Chemotherapy. 50:2732-2740.
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2006.
Dynamic biospeckle analysis, a new tool for the fast screening of plant nematicide selectivity. Plant Methods. 15:ArticleNo.155.
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2019.
Dynamic biospeckle analysis, a new tool for the fast screening of plant nematicide selectivity. Plant Methods. 15:ArticleNo.155.
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2019.
Ecological mitigation of hillsope instability: ten key issues facing researchers and practitioners. Plant and Soil. 377:1-23.
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2014.
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2013.
Economic valuation of ecosystem goods and services: a review for decision makers. Journal of Environmental Economics and Policy. 8:359-378.
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2019.
Editorial. Journal of Biogeography. 46:1625-1626.
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2019.
Effect of different sources of nitrogen on in situ degradability and feed intake of Zebu cattle fed sugarcane tops (Saccharum officinarum). Animal Feed Science and Technology. 139(3-4):143-158.
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2007.
Effect of duration of exposure to sewage sludge-treated pastures on liver tissue accumulation of persistent endocrine disrupting compounds (EDCs) in sheep. Science of the Total Environment. 409:3850-3856.
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2011.
Effect of method of conservation of timothy on endogenous nitrogen flows in lactating dairy cows. Journal of Dairy Science. 93:4252-4261.
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2010.
The effect of temperature on the male and female recombination landscape of barley. New Phytologist. 208:421-429.
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2015.
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2018.
Effects of season and sediment-water exchange processes on the partitioning of pesticides in the catchment environment: Implications for pesticides monitoring. Science of the Total Environment. 698:ArticleNo.134228.
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2020.
Effects of social behaviour on the spatial distribution of sheep grazing a complex vegetation mosaic. Applied Animal Behaviour Science. 115(3-4):149-159.
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2008.
Effects of soil conditions and drought on egg hatching and larval survival of the clover root weevil (Sitona lepidus). Applied Soil Ecology. 44:75-79.
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2010.
Effects on weed and invertebrate abundance and diversity of herbicide management in genetically modified herbicide-tolerant winter-sown oilseed rape. Proceedings of the Royal Society of London, Series B. 272:463-474. Abstract
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2005.
ELIGULUM-A regulates lateral branch and leaf development in barley. Plant Physiology. 176:2750-2760.
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2018.
Endophytic bacterial diversity in poplar trees growing on a btex-contaminated site: the characterisation of isolates with potential to enhance phytoremediation. Systematic and Applied Microbiology. 29(7):539-556.
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2006.
Enhancing flood resilience through improved risk communications. Natural Hazards and Earth System Sciences. 12:2271-2282.
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2012.
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2010.
The enigma of soil animal species diversity revisited: the role of small-scale heterogeneity. PLoS ONE. 5(7):e11567.
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2010.
Environmental DNA reveals links between abundance and composition of airborne grass pollen and respiratory health. Current Biology. 31:1995-2003.
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2021.
Environmental incomes: Refined standard and extended accounts applied to cork oak open woodlands in Andalusia, Spain. Ecological Indicators. 117:ArticleNo.106551.
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2020.
Essay - The role of ecological theory in microbial ecology. Nature Reviews Microbiology. 5(5):384-392.
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2007.
Estimating root-soil contact from 3-D X-ray microtomographs. European Journal of Soil Science. 63:776-786.
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2012.
Estimation of multiple transmission rates for epidemics in heterogeneous populations. Proceedings of the National Academy of Sciences, USA. 104:20392-20397. Abstract
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2007.
The Euler character: a new type of visual landscape metric? Environment and Planning B. 42:110-132.
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2015.
Evaluating capture stress and its effects on reproductive success in Svalbard reindeer. Canadian Journal of Zoology. 87(1):73-85.
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2009.
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2012.
Evaluation of spot and passive sampling for monitoring, flux estimation and risk assessment of pesticides within the constraints of a typical regulatory monitoring scheme. Science of the Total Environment. 569-570:1369-1379.
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2016.
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2017.
Evolutionary control of leaf element composition in plants. New Phytologist. 174:516-523. Abstract
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2007.
Evolutionary dynamics of the cellulose synthase gene superfamily in grasses. Plant Physiology. 168:968-983.
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2015.
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2021.
Exome sequences and multi-environment field trials elucidate the genetic basis of adaptation in barley. The Plant Journal. 99:1172-1191.
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2019.
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2013.
Exploiting physical defence traits for crop protection: leaf trichomes of Rubus idaeus have deterrent effects on spider mites but not aphids. Annals of Applied Biology. 168:159-172.
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2016.
Exposure to pastures fertilised with sewage sludge disrupts bone tissue homeostasis in sheep. The Science of the Total Environment. 407(7):2200-2208.
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2009.
Expressed sequence tag (EST) analysis of the pine wood nematode Bursaphelenchus xylophilus and B. mucronatus. Molecular and Biochemical Parasitology. 155:9-17. Abstract
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2007.
Facilitation in plant communities: the past, the present and the future. Journal of Ecology. 96:18-34.
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2008.
Factors influencing the national distribution of polycyclic aromatic hydrocarbons and polychlorinated iphenyls in British soils. Environmental Science and Technology. 40(24):7629-7635.
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2006.
A field system for measuring plant and soil carbon fluxes using stable isotope methods. European Journal of Soil Science. Published online..
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2020.
First report of potato cyst nematode Globodera rostochiensis, infecting potato (Solanum tuberosum) in Uganda. Plant Disease. 104:3082-3083.
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2020.
First report of the EU_33_A2 clonal lineage of Phytophthora infestans causing late blight disease of potato in Nigeria. New Disease Reports. 40:ArticleNo.20.
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2019.
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2009.
Flux and turnover of fixed carbon in soil microbial biomass of limed and un-limed plots of an upland grassland ecosystem. Environmental Microbiology. 7:544-552. Abstract
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2005.
Food security: focus on agriculture. Science. 328:172-173.
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2010.
Forging future organizational leaders for sustainability science. Nature Sustainability. 2:647-649.
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2019.
From bits to bites: advancement of the Germinate platform to support prebreeding informatics for crop wild relatives. Crop Science. Published online.
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2021.
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2021.
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2020.
The functional trait spectrum of European temperate grasslands. Journal of Vegetation Science. 777
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2019.
Fungal deterioration of barrier concrete used in nuclear waste disposal. Geomicrobiology Journal. 24(7):643-653.
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2007.
Genebank genomics highlights the diversity of a global barley collection. Nature Genetics.
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2019.
Genebank genomics highlights the diversity of a global barley collection. Nature Genetics.
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2019.
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2014.
Generating genomic tools for blueberry improvement. International Journal of Fruit Science. 12:276-287.
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2012.
Generation of nonvernal-obligate, faster-cycling Noccaea caerulescens lines through fast neutron mutagenesis. New Phytologist. 189:409-414.
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2011.