Publications list
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Albugo candida race diversity, ploidy and host-associated microbes revealed using DNA sequence capture on diseased plants in the field. New Phytologist. Published online..
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In Press.
Pathogen enrichment sequencing (PenSeq) enables population genomic studies in oomycetes. New Phytologist. Published online..
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In Press.
A global collection of permanent vegetation plots. Journal of Vegetation Science. Journal of Vegetation Science. 33
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2022.
Integrating ecosystem markets to coordinate landscapescale public benefits from nature. Published in PLOSONE on 12th Jan 2022. Citation: Reed MS, Curtis T, Gosal A, Kendall H, Andersen SP, Ziv G, et al. (2022) Integrating ecosystem markets to co-ordinate landscape-scale public benefits from nature. PLoS ONE 17(1): e0258334. https://doi.
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2022.
Pollinator-flower interactions in gardens during the COVID19 pandemic lockdown of 2020. Journal of Pollination Ecology.
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2022.
A systematic review of methods for studying the impacts of outdoor recreation on terrestrial wildlife. Global Ecology and Conservation. 22:ArticleNo.e00917.
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2022.
Application of wedge fracture test for texture analysis in boiled Sweetpotato (Ipomoea batatas). African Journal of Food Science. 15:145-151.
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2021.
Barley anther and meiocyte transcriptome dynamics in meiotic prophase I. Frontiers in Plant Science. 11:ArticleNo.619404.
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2021.
Benchmarking plant diversity of Palaearctic grasslands and other open habitats. Journal of Vegetation Science. 32:ArticleNo.e13050.
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2021.
Chemical and physical mechanisms of fungal bioweathering of rock phosphate. Geomicrobiology Journal. 38:384-394.
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2021.
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2021.
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2021.
Developmental metabolomics to decipher and improve fleshy fruit quality. Advances in Botanical Research. 98
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2021.
Distributional issues in natural capital accounting: An application to land ownership and ecosystem services in Scotland. Environmental and Resource Economics.
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2021.
Downregulation of barley Regulator of Telomere Elongation Helicase 1 alters the distribution of meiotic crossovers. Frontiers in plant science. 12:ArticleNo.745070.
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2021.
Environmental DNA reveals links between abundance and composition of airborne grass pollen and respiratory health. Current Biology. 31:1995-2003.
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2021.
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2021.
From bits to bites: advancement of the Germinate platform to support prebreeding informatics for crop wild relatives. Crop Science. Published online.
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2021.
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2021.
The interactions of site-specific factors on riparian buffer effectiveness across multiple pollutants: a review. Science of the Total Environment. 798:ArticleNo.149238.
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2021.
Irreproducibility in searches of scientific literature: A comparative analysis. Nature Methods. 11:14658-14668.
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2021.
Overriding importance of water table in the greenhouse gas balance of managed peatlands. Nature. Published online.
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2021.
Pollinator monitoring more than pays for itself. Journal of Applied Ecology. 58:44-57.
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2021.
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2021.
Predicting the severity of the grass pollen season and the effect of climate change in Northwest Europe. Science Advances. 7:ArticleNo.eabd7658.
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2021.
Spray induced gene silencing an innovative strategy for plant trait improvement and disease control. Crop Breeding and Applied Biotechnology.
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2021.
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2021.
Supporting the role of small farms in the European regional food systems: What role for the science-policy interface? Global Food Security. 28:ArticleNo.100433.
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2021.
Ubiquitination in plant meiosis: recent advances and high throughput methods. Frontiers in Plant Science. 12:ArticleNo.667314.
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2021.
Understanding the economic barriers to the adoption of agroforestry A Real Options analysis. Journal of Environmental Management. 302
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2021.
The utility of spatial data to delineate river riparian functions and management zones: a review. Science of the Total Environment. 757:ArticleNo.143982.
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2021.
Bioprospection of natural sources of polyphenols with therapeutic potential for redox-related diseases. Antioxidants. 9:ArticleNo.789.
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2020.
Call for transparency of COVID-19 models. Science. 368:482-483.
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2020.
Characterisation of barley landraces from Syria and Jordan for resistance to rhynchosporium and identification of diagnostic markers for Rrs1Rh4. Theoretical and Applied Genetics. 133:1243-1264.
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2020.
Compositional data analysis in time-use epidemiology: what, why, how. International Journal of Environmental Research and Public Health. 17:ArticleNo.2220.
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2020.
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2020.
The drivers of change for the contribution of small farms to regional food security in Europe. Global Food Security. 26:ArticleNo.100395.
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2020.
Effects of season and sediment-water exchange processes on the partitioning of pesticides in the catchment environment: Implications for pesticides monitoring. Science of the Total Environment. 698:ArticleNo.134228.
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2020.
Environmental incomes: Refined standard and extended accounts applied to cork oak open woodlands in Andalusia, Spain. Ecological Indicators. 117:ArticleNo.106551.
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2020.
A field system for measuring plant and soil carbon fluxes using stable isotope methods. European Journal of Soil Science. Published online..
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2020.
First report of potato cyst nematode Globodera rostochiensis, infecting potato (Solanum tuberosum) in Uganda. Plant Disease. 104:3082-3083.
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2020.
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2020.
How do small farms contribute to food and nutrition security? Linking small farms, strategies, outcomes in territorial food systems Global Food Security. 26:ArticleNo.100427.
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2020.
Improving energy expenditure estimates from wearable devices: A machine learning approach. Journal of Sports Sciences.
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2020.
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2020.
Intact salicylic acid signalling is required for potato defence against the necrotrophic fungus Alternaria solani. Plant Molecular Biology. 104:1-19.
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2020.
Integrating stakeholder knowledge through modular cooperative participatory processes for marine spatial planning outcomes (CORPORATES). Ecosystem Services. 44:ArticleNo.101126.
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2020.
Light regulation of chlorophyll and glycoalkaloid biosynthesis during tuber greening of potato S. tuberosum. Frontiers in Plant Science. 11:ArticleNo.753.
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2020.
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2020.
Low-cost hyperspectral imaging system using a linear variable bandpass filter for agritech applications. Applied Optics. 59:A167-A1754.
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2020.
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2020.
Optimal harvesting decision paths when timber and water have an economic value in uneven forests. Forests. 11:ArticleNo.903.
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2020.
Parallel mircrobial ecology of pasteuira and nematode species in Scottish soils. Frontiers in Plant Science. 10:ArticleNo.1763.
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2020.
Pollinator monitoring more than pays for itself. Journal of Applied Ecology.
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2020.
The potential of runoff attenuation features as a Natural Flood Management approach. Journal of Flood Risk Management.. 13:ArticleNo.e12565.
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2020.
Predicting dates of head initiation and yields of broccoli crops grown throughout Scotland. European Journal of Agronomy. 116:ArticleNo.126055..
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2020.
Preparing interdisciplinary leadership for a sustainable future. Sustainability Science..
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2020.
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2020.
Root-lesion nematodes of potato: current status of diagnostics, pathogenicity and management. Plant Pathology, Published online..
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2020.
Social tipping dynamics for stabilizing Earth's climate by 2050. Proceedings of the National Academy of Sciences of the United States of America. 117:2354-2365.
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2020.
Stimulation of homologous recombination in plants expressing heterologous recombinases. BMC Plant Biology. 20:ArticleNo.336.
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2020.
TRA1: A locus responsible for controlling agrobacterium-mediated transformability in barley. Frontiers in Plant Science. 11:ArticleNo.355.
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2020.
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2020.
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2019.
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2019.
Berry-enriched diet in salt-sensitive hypertensive rats: metabolic fate of (poly)phenols and the role of gut microbiota. Nutrients. 11:ArticleNo.2634.
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2019.
Beyond the black box: promoting mathematical collaborations for elucidating interactions in soil ecology. Ecosphere. 10:ArticleNo.e02799.
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2019.
Bridging the gap between national and ecosystem accounting application in Andalusian Forests, Spain. Ecological Economics. 157:218-236.
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2019.
Capacity and willingness of farmers and citizen scientists to monitor crop pollinators and pollination services. Global Ecology and Conservation. 20:ArticleNo.e00781.
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2019.
Carbon sequestration or water yield? The effect of payments for ecosystem services on forest management decisions in Mediterranean forests Water Resources and Economics. 28:ArticleNo.100119.
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2019.
Climate change impact and adaptation for wheat protein. Global Change Biology. 25:155-173.
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2019.
Comparative virulence of Caribbean, Brazilian and European isolates of Toxoplasma gondii. Parasites and Vectors. 12:ArticleNo.104.
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2019.
Current insight into the effectiveness of riparian management, attainment of multiple benefits and potential technical enhancements. Journal of Environmental Quality. 48:236-247.
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2019.
Digital mapping of peatlands - A critical review. Earth Science Reviews. 196
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2019.
Dissecting price setting efficiency in payments for ecosystem services: A meta-analysis of payments for watershed services in Latin America. Ecosystem Services. 38:ArticleNo.100961.
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2019.
Dissecting price setting efficiency in payments for ecosystem services: A meta-analysis of payments for watershed services in Latin America. Ecosystem Services. 38:ArticleNo.100961.
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2019.
Distinct roles for strigolactones in cyst nematode parasitism of Arabidopsis roots. European Journal of Plant Pathology. 154:129-140.
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2019.
Dynamic biospeckle analysis, a new tool for the fast screening of plant nematicide selectivity. Plant Methods. 15:ArticleNo.155.
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2019.
Dynamic biospeckle analysis, a new tool for the fast screening of plant nematicide selectivity. Plant Methods. 15:ArticleNo.155.
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2019.
Economic valuation of ecosystem goods and services: a review for decision makers. Journal of Environmental Economics and Policy. 8:359-378.
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2019.
Editorial. Journal of Biogeography. 46:1625-1626.
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2019.
Exome sequences and multi-environment field trials elucidate the genetic basis of adaptation in barley. The Plant Journal. 99:1172-1191.
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2019.
First report of the EU_33_A2 clonal lineage of Phytophthora infestans causing late blight disease of potato in Nigeria. New Disease Reports. 40:ArticleNo.20.
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2019.
Forging future organizational leaders for sustainability science. Nature Sustainability. 2:647-649.
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2019.
The functional trait spectrum of European temperate grasslands. Journal of Vegetation Science. 777
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2019.
Genebank genomics highlights the diversity of a global barley collection. Nature Genetics.
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2019.
Genebank genomics highlights the diversity of a global barley collection. Nature Genetics.
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2019.
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2019.
Global change effects on plant communities are magnified by time and the number of global change factors imposed. Proceedings of the National Academy of Sciences of the United States of America (PNAS). :ArticleNo.201819027.
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2019.
Global change effects on plant communities are magnified by time and the number of global change factors imposed. Proceedings of the National Academy of Sciences of the United States of America (PNAS). 116:17867-17873.
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2019.
Guest editorial special issue on payments for forest watershed services. Water Resources and Economics. 28:ArticleNo.100153..
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2019.
Identification and microbial production of the raspberry phenol Salidroside that is active against Huntington’s Disease. Plant Physiology. 179:969-985.
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2019.
The impact of blackcurrant juice on attention, mood and brain wave spectral activity in young healthy volunteers. Nutritional Neuroscience. 22:596-606.
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2019.
The importance of mineral determinations to PROFILE base cation weathering release rates: a case study. Biogeosciences. 16:1903-1920.
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2019.
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2019.
Long-term exposure to chemicals in sewage sludge fertilizer alters liver lipid content in females and cancer marker expression in males. Environment International. 124:98-108.
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2019.
Management options to reduce phosphorus leaching from vegetated buffer strips. Journal of Environmental Quality. 48:322-329.
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2019.
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2019.
Myocardial and systemic inflammation in acute stress-induced (Takotsubo) cardiomyopathy. Circulation. 129:1581-1592.
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2019.
New training to meet the global phosphorus challenge. Environmental Science and Technology. 53:8479-8481.
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2019.
Pathogen enrichment sequencing (PenSeq) enables population genomic studies in oomycetes. New Phytologist. 221:1634-1648.
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2019.
Policy-driven monitoring and evaluation: does it support adaptive management of socio-ecological systems? Science of the Total Environment. 662:373-384.
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2019.
The potential for polyphosphate metabolism in Archaea and anaerobic polyphosphate formation in Methanosarcina mazei. Scientific Reports. 9:ArticleNo.17101.
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2019.
The rational simplification of a recombinant cocktail vaccine to control the parasitic nematode Teladorsagia circumcincta. International Journal for Parasitology. 49:257-265.
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2019.
A review of economic approaches modeling the complex interactions between forest management and watershed services. Forest Policy and Economics. 100:164-176.
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2019.
Rhynchosporium leaf scald disease incidence: seed source and spatial pattern. Plant Pathology. 68:1179-1187.
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2019.
RNAi-suppression of barley caffeic acid O-methyltransferase modifies lignin despite redundancy in the gene family. Plant Biotechnology Journal.. 17:594-607.
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2019.
Scotland's natural capital asset index: tracking nature's contribution to national wellbeing. Ecological Indicators. 107:ArticleNo.105645.
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2019.
Securing the future of US agriculture: The case for investing in new entry sustainable farmers. Elementa - Science of the Anthropocene. 7:ArticleNo.17.
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2019.
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2019.
Single nucleotide polymorphism assay to distinguish barley (Hordeum vulgare L.) varieties in support of seed certification. Genetic Resources and Crop Evolution. 66:1243-1256.
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2019.
Social innovation in community energy in Europe: a review of the evidence. Frontiers in Energy Research: Energy Systems and Policy. Published online.. 7:ArticleNo.31.
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2019.
Soil biota, carbon cycling and crop plant biomass responses to biochar in a temperate mesocosm experiment. Plant and Soil. 440:341-356.
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2019.
Soil nematode abundance and functional group composition at a global scale. Nature. 572:194-198.
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2019.
Temperate airborne grass pollen defined by spatio-temporal shifts in community composition. Nature Ecology and Evolution. 3:750-754.
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2019.
Tracing the ancestry of modern bread wheats. Nature Genetics. 51:905-911.
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2019.
Twenty three unsolved problems in hydrology (UPH) - a community perspective. Hydrological Sciences Journal.. 64:1141-1158.
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2019.
Using species records and ecological attributes of bryophytes to develop an ecosystem health indicator. Ecological Indicators. 104:127-136.
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2019.
The Weaklaw Vent, SE Scotland: Metasomatism of eruptive products by carbo-hydro-fluids of probable mantle origin. Mineralogical Magazine. 83:855-867.
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2019.
(Poly)phenol-digested metabolites modulate alpha-synuclein toxicity by regulating proteostasis. Scientific Reports. 8:ArticleNo.6965..
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2018.
Absence of Curli in soil-persistent Escherichia coli is mediated by a C-di-GMP signaling defect and suggests evidence of biofilm-independent niche specialization. Frontiers in Microbiology. 9:ArticleNo.1340.
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2018.
AMOchar: Amorphous manganese oxide coating of biochar improves its efficiency at removing metal(loid)s from aqueous solutions. Science of the Total Environment. 625:71-78.
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2018.
Application of multiple behaviour change models to identify determinants of farmers' biosecurity attitudes and behaviour. Preventive Veterinary Medicine. 115:61-74.
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2018.
BacHBerry: BACterial Hosts for production of Bioactive phenolics from bERRY fruits. Phytochemistry Reviews. 17:291-326.
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2018.
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2018.
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2018.
Classifying multi-model wheat yield impact response surfaces showing sensitivity to temperature and precipitation change. Agricultural Systems. 159:209-224.
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2018.
Co-occurrence of defensive traits in the potato aphid Macrosiphum euphorbiae. Ecological Entomology. 43:538-542.
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2018.
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2018.
Comparative genetic mapping reveals synteny and collinearity between the American cranberry and diploid blueberry genomes. Molecular Breeding. 38:ArticleNo.9.
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2018.
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2018.
Defining and delivering resilient ecological networks: nature conservation in England. Journal of Applied Ecology. Published online..
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2018.
Defining and delivering resilient ecological networks: nature conservation in England. Journal of Applied Ecology. 55:2537-2543.
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2018.
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2018.
Does soil warming affect the interaction between Pasteuria penetrans and Meloidogyne javanica in tomato plants? Plant Pathology. 67:1777-1783.
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2018.
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2018.
ELIGULUM-A regulates lateral branch and leaf development in barley. Plant Physiology. 176:2750-2760.
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2018.
Identification and microbial production of the raspberry phenol Salidroside that is active against Huntington’s Disease. Plant Physiology. 179:969-985.
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2018.
The impact of blackcurrant juice on attention, mood and brain wave spectral activity in young healthy volunteers. Nutritional Neuroscience. Published online..
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2018.
A method for uncertainty constraint of catchment discharge and phosphorus load estimates. Hydrological Processes. 32:2779-2787.
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2018.
Municipal wastewater as a microbial surveillance platform for enteric diseases: a case study for salmonella and salmonellosis. Environmental Science and Technology. 52:4869-4877.
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2018.
New live screening of plant-nematode interactions in the rhizosphere. Scientific Reports. 8:ArticleNo.1440.
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2018.
Operationalising ecosystem service assessment in bayesian belief networks: Experiences within the OpenNESS project. Ecosystem Services. 29:452-464.
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2018.
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2018.
Quantifying and mitigating wind-induced undercatch in rainfall measurements. Water Resources Research. 54:3863-3875.
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2018.
A rapid diagnostic for detection of Aphelenchoides besseyi and A. fujianensis based on real-time PCR. Plant Disease. 102:519-526.
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2018.
Rejoinder to Comments on Minasny et al., 2017 Soil carbon 4 per mille. Geoderma, 292, 59-86. Geoderma. 309:124-129.
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2018.
Rejoinder to Comments on Minasny et al., 2017 Soil carbon 4 per mille. Geoderma, 292, 59-86. Geoderma. 309:124-129.
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2018.
Risk estimation and annual fluxes of emerging contaminants from a Scottish priority catchment to the estuary and North Sea. Environmental Geochemistry and Health. 40:1987-2005.
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2018.
Simulation of soil organic carbon effects on long-term winter wheat (Triticum aestivum) production under varying fertilizer inputs. Frontiers in Plant Science. 9:ArticleNo.1158.
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2018.
Soil organic carbon sequestration and mitigation potential in a rice cropland in Bangladesh - a modelling approach. Field Crops Research. 226:16-27.
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2018.
A tale of two eras: Phytoplankton composition influenced by oceanic paleochemistry. Geobiology. 16:498-506.
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2018.
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2018.
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2018.
Typology and distribution of small farms in Europe: Towards a better picture. Land Use Policy. 75:784-798.
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2018.
Typology and distribution of small farms in Europe: Towards a better picture. Land Use Policy. 75:784-798.
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2018.
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2018.
Architecture and permeability of post-cytokinesis plasmodesmata lacking cytoplasmic sleeves. Nature Plants. 3:ArticleNo.17082.
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2017.
BTB-BACK domain protein POB1 suppresses immune cell death by targeting ubiquitin E3 ligase PUB17 for degradation. PLoS Genetics. 13:e1006540.
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2017.
A chromosome conformation capture ordered sequence of the barley genome. Nature. 544:427-433.
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2017.
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2017.
Compositional analysis of Scottish honeys with antimicrobial activity against antibiotic-resistant bacteria reveals novel antimicrobial components. LWT - Food Science and Technology. 79:52-59.
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2017.
Construction of a map-based reference genome sequence for barley, Hordeum vulgare L. Scientific Data. 4:ArticleNo.170044.
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2017.
Construction of a map-based reference genome sequence for barley, Hordeum vulgare L. Scientific Data. 4:ArticleNo.170044.
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2017.
Crop model improvement reduces the uncertainty of the response to temperature of multi-model ensembles. Field Crops Research. 202:5-20.
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2017.
Cross-realm assessment of the impact of climate change on species’ abundance trends. Nature Ecology and Evolution. 1:ArticleNo.0067.
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2017.
Denial of long-term issues with agriculture on tropical peatlands will have devastating consequences. Global Change Biology. 23:977-982.
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2017.
Determining the effect of drying time on phosphorus release from agricultural soils under climate change scenarios. Journal of Environmental Quality. 46:1131-1136.
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2017.
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2017.
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2017.
Impact analysis of climate data aggregation at different spatial scales on simulated net primary productivity for croplands. European Journal of Agronomy. 88:41-52.
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2017.
Major agricultural changes required to mitigate phosphorus losses under climate change. Nature Communications. 8:ArticleNo,161.
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2017.
Major agricultural changes required to mitigate phosphorus losses under climate change. Nature Communications. 8:ArticleNo,161.
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2017.
Metagenomic analysis of the gut microbiome of the common black slug arion ater in search of novel lignocellulose degrading enzymes. Frontiers in Microbiology. 9:ArticleNo.2181.
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2017.
Molecular characterization of novel Bradyrhizobium strains nodulating ErioSema Chinese and Flemingia vestita, important unexplored native legumes of the sub-Himalayan region (Meghalaya) of India. Systematic and Applied Microbiology. 40:334-344.
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2017.
Novel colon-available triterpenoids identified in raspberry fruits exhibit antigenotoxic activities in vitro. Molecular Nutrition and Food Research. 61:ArticleNo.1600327.
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2017.
Operationalising ecosystem service assessment in bayesian belief networks: Experiences within the OpenNESS project. Ecosystem Services. 29:452-464.
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2017.
Plant parasitic nematode assemblages associated with sweet potato in Kenya and their relationship with environmental variables. Tropical Plant Pathology. 42:1-12.
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2017.
A randomised controlled trial comparing a dietary antiplatelet, the water-soluble tomato extract Fruitflow, with 75mg aspirin in healthy subjects. European Journal of Clinical Nutritiion. 71:723-730.
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2017.
Soil carbon 4 per mille. Geoderma. 292:59-86.
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2017.
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2017.
Soil organic carbon (SOC) equilibrium and model initialisation methods: an application to the Rothamsted carbon (RothC) model. Environmental Modeling and Assessment. 22:215-239.
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2017.
A survey of root knot nematodes and resistance to Meloidogyne incognita in sweet potato varieties from Kenyan fields. Crop Protection. 92:114-121.
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2017.
Transformation in a changing climate: a research agenda. Climate and Development. Published online..
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2017.
Transformation in a changing climate: a research agenda. Climate and Development. Published online..
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2017.
The uncertainty of crop yield projections is reduced by improved temperature response functions. Nature Plants. 3:ArticleNo.17102.
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2017.
The uncertainty of crop yield projections is reduced by improved temperature response functions. Nature Plants. 3:ArticleNo.17102.
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2017.
Changing climate and nutrient transfers: Evidence from high temporal resolution concentration-flow dynamics in headwater catchments. Science of the Total Environment. 548:325-339.
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2016.
Construction of a SNP and SSR linkage map in autotetraploid blueberry using genotyping by sequencing. Molecular Breeding. 36:ArticleNo.4.
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2016.
Diversity of endosymbiont bacteria associated with a non-filarial nematode group. Nematology. 18:615-623.
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2016.
Evaluation of spot and passive sampling for monitoring, flux estimation and risk assessment of pesticides within the constraints of a typical regulatory monitoring scheme. Science of the Total Environment. 569-570:1369-1379.
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2016.
Exploiting physical defence traits for crop protection: leaf trichomes of Rubus idaeus have deterrent effects on spider mites but not aphids. Annals of Applied Biology. 168:159-172.
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2016.
Genomic selection in multi-environment crop trials. G3- Genes Genomes Genetics. 6:1313-1326.
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2016.
The grain Hardness locus characterized in a diverse wheat panel (Triticum aestivum L.) adapted to the central part of the Fertile Crescent: genetic diversity, haplotype structure, and phylogeny. Molecular Genetics and Genomics. 291:1259-1275.
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2016.
Impact of warming on CO2 emissions from streams countered by aquatic photosynthesis. Nature Geoscience. 9:758-761.
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2016.
Lattice Boltzmann method for the fractional advection-diffusion equation. Physical Review E. 93:ArticleNo.043310.
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2016.
Mapping earthworm communities in Europe. Applied Soil Ecology. 97:98-111.
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2016.
Modeling soil processes: Review, key challenges, and new perspectives. Vadose Zone Journal. 15
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2016.