Publications list
Filters: First Letter Of Last Name is P [Clear All Filters]
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2018.
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2018.
Rapid and dynamic alternative splicing impacts the arabidopsis cold response transcriptome. Plant Cell. 30:1424-1444.
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2018.
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2008.
Quantitative trait loci and candidate loci for heading date in a large population of a wide barley cross. Crop Science. 52:2469-2480.
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2012.
Quantitative high resolution mapping of HvMLH3 foci in barley pachytene nuclei reveals a strong distal bias and weak interference. Journal of Experimental Botany. 64:2139-2154.
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2013.
Quantifying turnover in biodiversity of British breeding birds. Journal of Applied Ecology. 53:469-478.
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2015.
Quantifying turnover in biodiversity of British breeding birds. Journal of Applied Ecology. 53:469-478.
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2016.
Quantifying fish and mobile invertebrate production from a threatened nursery habitat. Journal of Applied Ecology. 53:596-606.
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2016.
Quantifying and mitigating wind-induced undercatch in rainfall measurements. Water Resources Research. 54:3863-3875.
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2018.
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2014.
QTL mapping of yield, agronomic and quality traits in tetraploid potato (Solanum tuberosum subsp. tuberosum). Theoretical and Applied Genetics. 116:193-211. Abstract
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2008.
QTL for resistance to Globodera rostochiensis pathotype Ro2 and G. pallida pathotype Pa2/3 in autotetraploid potato. American Journal of Potato Research. 96:552-553.
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2019.
QTL analysis of a cross between European and North American malting barleys reveals a putative candidate gene for . Molecular Breeding. 19:275-284. Abstract
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2007.
Pyromorphite formation in a fungal biofilm community growing on lead metal. Environmental Microbiology. 16:1441-1451.
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2014.
Putting the eco back in ecotourism. Animal Conservation. 14:325-327.
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2011.
Putting plant defences on the map: a test of the idea that plants are better defended at lower latitudes. New Phytologist. 191:777-788.
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2011.
The pseudogenes of barley. The Plant Journal. 93:502-514.
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2018.
The pseudogenes of barley. Plant Journal. 93:502-514.
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2018.
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2019.
A prototype cloud-based reproducible data analysis and visualization platform for outputs of agent-based models. Environmental Modelling and Software. 96:172-180.
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2017.
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2014.
A proteomic and targeted metabolomic approach to investigate change in Lolium perenne roots when challenged with glycine. Journal of Experimental Botany. 58(7):1581-1590.
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2007.
Proteomic analysis of the Arabidopsis nucleolus suggests novel nucleolar functions. Molecular Biology of the Cell. 16:260-269.
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2005.
Protection of ewes against Teladorsagia circumcincta infection in the periparturient period by vaccination with recombinant antigens. Veterinary Parasitology. 228:130-136.
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2016.
Protecting and restoring Europe’s waters: an analysis of the future development needs of the Water Framework Directive. Science of Total Environment. 658:1228-1238.
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2019.
Protected raspberry production accelerates onset of oviposition by vine weevils (Otiorhynchus sulcatus). Agricultural and Forest Entomology. 12:277-283.
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2010.
Projecting the effect of crop yield increases, dietary change and different price scenarios on land use under two different state security regimes. International Journal of Agricultural Sustainability. 19:288-304.
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2021.
Progress in model-to-model analysis. Journal of Artificial Societies and Social Simulation. 11(2):8.
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2008.
Profiling of phenols in human faecal water after raspberry supplementation. Journal of Agricultural and Food Chemistry. 58:10389-10395.
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2010.
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2014.
Profiling and quantification of regioisomeric caffeoyl glucoses in berry fruits. Journal of Agricultural and Food Chemistry. 66:1096-1104.
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2018.
Process-based principles for restoring river ecosystems. BioScience. 60(3):209-222.
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2010.
Process for benchmarking models: dialogue between water managers and modellers. Archiv fur Hydrologie, Large Rivers Supplement. 17(1-2):3-21.
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2006.
Problems of farm succession in the post-Soviet space: insights from the Republic of Moldova. Journal of Land Use Science. 13:631-644.
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2019.
Probing free radical processes during storage of extracts from whole roasted coffee beans: impact of O-2 exposure during extraction and storage. Journal of Agricultural and Food Chemistry. 61:3301-3305.
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2013.
Probabilistic approach to the identification of input variables to estimate hydraulic conductivity. Soil Science Society of America Journal. 72(1):16-24.
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2008.
A probabilistic approach to river network detection in digital elevation models. Catena. 87:341-350.
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2011.
Priming of soil organic matter mineralisation is intrinsically insensitive to temperature. Soil Biology and Biochemistry. 66:20-28.
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2013.
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2011.
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2015.
Preparing interdisciplinary leadership for a sustainable future. Sustainability Science..
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2020.
Preferences of sheep and goats for straw pellets treated with different food-flavouring agents. Small Ruminant Research. 63(1-2):50-57.
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2006.
Preface to the thematic issue on modelling systemic change in coupled socio-environmental systems. Environmental Modelling and Software. 75:317.
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2016.
Preface. Mathematical Modelling of Natural Phenoma. 8:1-4.
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2013.
The PREDICTS database: a global database of how local terrestrial biodiversity responds to human impacts. Ecology and Evolution. 4:4701-4735.
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2014.
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2021.
Predicting the severity of the grass pollen season and the effect of climate change in Northwest Europe. Science Advances. 7:ArticleNo.eabd7658.
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2021.
Predicting alcohol yield from UK soft winter wheat for grain distilling: combined influence of hardness and nitrogen measurements. Journal of the Institute of Brewing. 115:183-190.
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2009.
Predicting a change in the order of spring phenology in temperate forests. Global Change Biology. 21:2603-2611.
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2015.
Potentials and pitfalls in the analysis of bipartite networks to understand plant-microbe interactions in changing environments. Functional Ecology.. 33:107-117.
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2019.
Potential tracers for tracking septic tank effluent discharges in watercourses. Environmental Pollution. 228:245-255.
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2017.
A potential loss of carbon associated with greater plant growth in the European Arctic. Nature Climate Change. 2:875-879.
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2012.
The potential for polyphosphate metabolism in Archaea and anaerobic polyphosphate formation in Methanosarcina mazei. Scientific Reports. 9:ArticleNo.17101.
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2019.
The potential for modelling peatland habitat condition in Scotland using long-term MODIS data. Science of the Total Environment. 660:429-442.
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2019.
Potential and realised contribution of endozoochory to seedling establishments. Basic and Applied Ecology. 10(7):656-661.
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2009.
Potato virus Y HCPro localization at distinct, dynamically related and environment-influenced structures in the cell cytoplasm. Molecular Plant-Microbe Interactions. 27:1331-1343.
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2014.
Potato late blight field resistance from QTL dPI09c is conferred by the NB-LRR gene R8. Journal of Experimental Botany. 69:1545-1555.
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2018.
Posterior-based proposals for speeding up Markov chain Monte Carlo. Royal Society Open Science. 6:ArticleNo.190619.
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2019.
Post-Soviet smallholders between entrepreneurial farming and diversification. Livelihood pathways in rural Moldova. Journal of Rural Studies. 82:315-327.
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2021.
Possible interactions between environmental factors in determining species optima. Journal of Vegetation Science. 19:201-208.
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2008.
Possible consequences of the Copenhagen climate change meeting for conservation of animals. Animal Conservation. 12(6):503-504.
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2009.
Population structure of Phytophthora infestans collected on potato and tomato in Italy. Plant Pathology. Published online..
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2021.
Polysaccharides and monosaccharides in the hyphosphere of the arbuscular mycorrhizal fungi Glomus E3 and Glomus tenue. Soil Biology and Biochemistry. 39(2):680-683.
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2007.
Polyphenols journey through blood-brain barrier towards neuronal protection. Scientific Reports. 7:ArticleNo.11456.
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2017.
Polyphenol and vitamin C content in European commercial blackcurrant juice products. Food Chemistry. 127:1216-1223.
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2011.
A polygalacturonase-inhibiting protein with a role in pea defence against the cyst nematode Heterodera goettingianna. Molecular Plant Pathology. 12:275-287.
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2011.
Poly(T) variation within mitochondrial protein-coding genes in Globodera (Nematoda : Heteroderidae). Journal of Molecular Evolution. 66:197-209. Abstract
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2008.
Pollinator-flower interactions in gardens during the COVID19 pandemic lockdown of 2020. Journal of Pollination Ecology.
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2022.
Pollinator monitoring more than pays for itself. Journal of Applied Ecology.
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2020.
Pollinator monitoring more than pays for itself. Journal of Applied Ecology. 58:44-57.
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2021.
The politico-economics of electricity planning in developing countries: a case study of Ghana. Energy Policy. 88:299-309.
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2016.
The politico-economics of electricity planning in developing countries: a case study of Ghana. Energy Policy. 88:299-309.
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2016.
Policy-driven monitoring and evaluation: does it support adaptive management of socio-ecological systems? Science of the Total Environment. 662:373-384.
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2019.
Point mutations in the potato leafroll virus major capsid protein alter virion stability and aphid transmission. Journal of General Virology. 88:1821-1830. Abstract
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2007.
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2014.
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2016.
Pluralism of agricultural advisory service providers - Facts and insights from Europe. Journal of Rural Studies. 55:45-58.
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2017.
Platelet-derived microparticle count and surface molecule expression differ between subjects with and without type 2 diabetes, independently of obesity status. Journal of Thrombosis and Thrombolysis. 37:455-463.
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2014.
Plant-plant competition influences temporal dynamism of soil microbial enzyme activity. Soil Biology and Biochemistry. 139:ArticleNo.107615..
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2019.
Plant U13 orthologues and orphan snoRNAs identified by RNomics of RNA from Arabidopsis nucleoli. Nucleic Acids Research. 38:3054-3067.
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2010.
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2013.
Plant resistance responses to viruses. Journal of Plant Pathology. 90:153-171.
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2008.
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2021.
The plant microbiome. Genome Biology. 14:209.
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2013.
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2013.
Plant functional connectivity - integrating landscape structure and effective dispersal. Journal of Ecology. 105:1648-1656.
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2017.
Plant coilin: structural characteristics and RNA-binding properties. PLoS ONE. 8:e53571.
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2013.
A plant chitinase controls cortical infection thread progression and nitrogen-fixing symbiosis. ELIFE. 7:ArticleNo.e38874.
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2018.
Plant cell and biotechnology studies in Linum usitatissimum - a review. Plant Cell, Tissue and Organ Culture. 82:93-103. Abstract
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2005.
Pinus susceptibility to pitch canker triggers specific physiological responses in symptomatic plants: an integrated approach. Frontiers in Plant Science. 10:ArticleNo,509.
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2019.
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2014.
The Phytophthora infestans avirulence gene Avr4 encodes an RXLR-dEER effector. Molecular Plant-Microbe Interactions. 21:1460-1470. Abstract
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2008.
Phytoglobins in the nuclei, cytoplasm and chloroplasts modulate nitric oxide signaling and interact with abscisic acid. The Plant Journal. Published online..
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2019.
Phytaspase-mediated precursor processing and maturation of the wound hormone systemin. New Phytologist. 218:1167-1178.
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2018.
Physiological, biochemical, and ultrastructural charcterization of selenium toxicity in cowpea plants. Environmental and Experimental Botany. 150:172-182.
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2018.
Physiological, biochemical, and ultrastructural characterization of selenium toxicity in cowpea plants. Environmental and Experimental Botany. 150:172-182.
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2018.
A physical, genetic and functional sequence assembly of the barley genome. Nature. 491:711-716.
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2012.
Physical response of rigid and non-rigid soils to analogues of biological exudates. European Journal of Soil Science. 62:676-684.
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2011.
Phylogenetic relationship of Phytophthora cryptogea Pethybr. & Laff and P. drechsleri Tucker. Fungal Biology. 114:325-339.
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2010.
Phylogenetic diversity of ceftriaxone resistance and the presence of extended-spectrum beta-lactamase genes in the culturable soil resistome. Journal of Global Antimicrobial Resistance.
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2016.
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2022.
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2008.
Photosynthetic plasticity allows blueberry (Vaccinium corymbosum L.) plants to compensate for yield loss under conditions of high sink demand. Environmental and Experimental Botany. 174:ArticleNo.104031.
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2020.
Photosynthetic limitation as a factor influencing yield in highbush blueberries (Vaccinium corymbosum) in a northern European environment. Journal of Experimental Botany. 69:3069-3080.
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2018.
Phosphorus-zinc interactions in cotton: consequences for biomass production and nutrient-use efficiency in photosynthesis. Physiologia Plantarum. 166:996-1007.
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2019.
Phenotypical and molecular characterization of Tomato mottle Taino virus - Nicotiana megalosiphon interaction. Physiological and Molecular Plant Pathology. 67:231-236. Abstract
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2006.
Phenotypic correlates of hybridisation between red and sika deer (genus Cervus). Journal of Animal Ecology. 79(2):414-425.
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2010.
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2013.
Phenological changes of the most commonly-sampled ground beetle (Coleoptera: Carabidae) species in the UK Environmental Change Network. International Journal of Biometeorology. Published online..
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2018.
Phenological changes of the most commonly-sampled ground beetle (Coleoptera: Carabidae) species in the UK environmental change network. International Journal of Biometeorology. 62:1063-1074.
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2018.
Phenolic-rich extracts from the edible seaweed, Ascophyllum nodosum, inhibit alpha-amylase and alpha-glucosidase: Potential anti-hyperglycemic effects. Journal of Functional Foods. 10:201-209.
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2014.
The Ph1 locus suppresses Cdk2-type activity during premeiosis and meiosis in wheat. The Plant Cell. 24:152-162.
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2012.
Pervasive within-host recombination and epistasis as major determinants of the molecular evolution of the foot-and-mouth disease virus capsid. PLoS Pathogens. 16:ArticleNo.e1008235.
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2020.
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2012.
Pectobacterium parvum sp. nov., having a Salmonella SPI-1-like Type III secretion system and low virulence. International Journal of Systematic and Evolutionary Microbiology. 70:2440-2448.
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2020.
Peatland afforestation in the UK and consequences for carbon storage. Mires and Peat. 23:ArticleNo.1..
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2019.
Peat, water and plant tissue chemistry monitoring: A seven-year case-study in a restored peatland. Wetlands. 30(1):159-170.
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2010.
Patterns of genetic diversity and linkage disequilibrium in a highly structured Hordeum vulgare association-mapping population for the Mediterranean basin. Theoretical and Applied Genetics. 119:175-187.
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2009.
Patterns of bird functional diversity on land-bridge island fragments. Journal of Animal Ecology. 82:781-790.
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2013.
Pathways linking biodiversity to human health: A conceptual framework. Environment International. 150:ArticleNo.106420.
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2021.
Pathogenic potential to humans of bovine Escherichia coli O26, Scotland. Emerging Infectious Diseases. 18:439-448.
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2012.
Pathogenesis of scrapie in ARQ/ARQ sheep after subcutaneous infection: Effect of lymphadenectomy and immune cell subset changes in relation to prion protein accumulation. Veterinary Immunology and Immunopathology. 152:348-358.
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2013.
Participatory scenario-planning in place-based social-ecological research: insights and experiences from 23 case studies. Ecology and Society. 20:ArticleNo.34.
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2015.
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2007.
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2008.
Parameter and uncertainty estimation for process-oriented population and distribution models: data, statistics and the niche. Journal of Biogeography. 39:2225-2239.
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2012.
Paraburkholderia youngii sp. nov. and 'Paraburkholderia atlantica' - Brazilian and Mexican Mimosa-associated rhizobia that were previously known as Paraburkholderia tuberum sv. Mimosae. Systematic and Applied Microbiology. 44:ArticleNo.126152.
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2021.
p15 encoded by Garlic virus X is a pathogenicity factor and RNA silencing suppressor. Journal of General Virology. 99:1515-1521.
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2018.
Overstory and understory vegetation interact to alter soil community composition and activity. Plant and Soil. 352:65-84.
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2012.
Overriding importance of water table in the greenhouse gas balance of managed peatlands. Nature. Published online.
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2021.
Overcoming resistance and resilience of an invaded community is necessary for effective restoration: a multi-site bracken control study. Journal of Applied Ecology. 50:156-167.
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2013.
Over winter cover crops provide yield benefits for spring barley and maintain soil health in northern Europe. European Journal of Agronomy. 130:ArticleNo.126363.
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2021.
Oriented immobilisation of engineered single-chain antibodies to develop biosensors for virus detection. Journal of Virological Methods. 134:164-170. Abstract
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2006.
Organic phosphorus in the terrestrial environment: a perspective on the state of the art and future priorities. Plant and Soil. 427:191-208.
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2018.
Organic phosphorus in the terrestrial environment: a perspective on the state of the art and future priorities. Plant and Soil. 427:191-208.
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2018.
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2013.
Opportunities for improving phosphorus-use efficiency in crop plants. New Phytologist. 195:306-320.
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2012.
Opportunities and challenges for terrestrial carbon offsetting and marketing, with some implications for forestry in the UK. South and East European Journal of Forestry (SEEFOR). 1:69-79.
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2011.
Open access for social simulation. Journal of Artificial Societies and Social Simulation. 10(3):10.
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2007.
Oomycete RXLR effectors: delivery, functional redundancy and durable disease resistance. Current Opinion in Plant Biology. 11:373-379. Abstract
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2008.
Ontologies for transparent integrated human-natural system modelling. Landscape Ecology. 24(9):1255-1267.
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2009.
Onsite geometric calibration of RPAS mounted sensors for SfM photogrammetric geomorphological surveys. Earth Surface Processes and Landforms..
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2022.
One century of Nordic barley breeding: nitrogen use efficiency, agronomic traits and genetic diversity. Journal of Agricultural Science. 155:582-598.
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2017.
On the use of unmanned aerial systems for environmental monitoring. Remote Sensing. 10:ArticleNo.641.
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2018.
On the use of unmanned aerial systems for environmental monitoring. Remote Sensing. 10:ArticleNo.641.
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2018.
Olive oil nutritional labeling by using Vis/NIR spectroscopy and compositional statistical methods. Innovative Food Science and Emerging Technologies. 51:139-147.
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2019.
The oil-contaminated soil diazotroph Azoarcus olearius DQS-4T if genetically and phenotypically similar to the model grass endophyte Azoarcus sp. BH72. Environmental Microbiology Reports. 9:223-238.
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2017.
ODD updated. Journal of Artificial Societies and Social Simulation.. 13(4):9.
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2010.
The ODD protocol for describing individual-based and agent-based models: A first update. Ecological Modelling. 221(23):2760-2768.
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2010.
The ODD protocol for describing agent-based and other simulation models: a second update to improve clarity, replication, and structural realism. Journal of Artificial Societies and Social Simulation. 23:ArticleNo.7.
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2020.
Oceans of opportunity or stormy seas? What does the future hold for developments in European marine policy Philosophical Transactions of the Royal Society of London, A.. 370:5682-5700.
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2012.
Oceanic protists with different forms of acquired phototrophy display contrasting biogeographies and abundance. Proceedings of the Royal Society B, Biological Sciences. 284:ArticleNo.1860.
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2017.
Ocean acidification as a multiple driver: how interactions between changing seawater carbonate parameters affect marine life. Marine and Freshwater Research. 781:263-274.
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2020.
Occurrence of resistance-breaking populations of root-knot nematodes on tomato in Greece. European Journal of Plant Pathology. 113:101-105. Abstract
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2005.
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2015.
Nutrient mineralisation and microbial functional diversity in a restored bog approach natural conditions 10 years post restoration. Soil Biology and Biochemistry. 64:37-47.
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2013.
Nutrient acquisition in four Mediterranean gorgonian species. Marine Ecology Progress Series. 473:179-188.
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2013.
The NuGO proof of principle study package: a collaborative research effort of the European Nutrigenomics Organisation. Genes and Nutrition. 3:147-151.
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2008.
Now you see it, now you don't: The challenge of detecting, monitoring and conserving ectomycorrhizal fungi. Fungal Ecology. 5:633-640.
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2012.
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2007.
A novel, high-welfare methodology for evaluating poultry red mite interventions in vivo. Veterinary Parasitology. 267:42-46.
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2019.
A novel technique for retrospective genetic analysis of the response to vaccination or infection using cell-free DNA from archived sheep serum and plasma. Veterinary Research. 51:ArticleNo.9..
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2020.
Novel quorum sensing-controlled genes in Erwinia carotovora subsp. carotovora: identification of a fungal elicitor homologue in a soft-rotting bacterium. Molecular Plant-Microbe Interactions. 18:343-353. Abstract
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2005.
A novel framework for linking functional diversity of plants with other trophic levels for the quantification of ecosystem services. Journal of Vegetation Science. 24:942-948.
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2013.
Novel Cupriavidus strains isolated from root nodules of native Uruguayan Mimosa species. Applied and Environmental Microbiology. 82:3150-3164.
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2016.
Novel colon-available triterpenoids identified in raspberry fruits exhibit antigenotoxic activities in vitro. Molecular Nutrition and Food Research. 61:ArticleNo.1600327.
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2017.
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2020.
The North East Scotland Energy Monitoring Project: Exploring relationships between household occupants and energy usage. Energy and Buildings. 75:493-503.
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2014.
Nonlinearities in biodiversity incentive schemes: A study using an integrated agent-based and metacommunity model. Environmental Modelling and Software. 45:74-91.
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2013.
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2007.
The non-market value of reclaimed waste water for use in agriculture: a contingent valuation approach. Spanish Journal of Agricultural Research. 8(S2):187-196.
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2010.
Non-invasive protocol for kinematic monitoring of root growth under infrared light. Bio-protocol. 7:ArticleNo.e2390.
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2017.
Non-destructive automatic leaf area measurements by combining stereo and time-of-flight images. IET Computer Vision. 8:391-403.
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2014.
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2019.
Nodulation of Sesbania species by Rhizobium (Agrobacterium) strain IRBG74 and other Rhizobia. Environmental Microbiology. 11:2510-2525.
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2009.
Nodulation of Sesbania species by Rhizobium (Agrobacterium) strain IRBG74 and other rhizobia. Environmental Microbiology. 11(10):2510-2525.
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2009.
Nodulation of legumes from the Thar desert of India and molecular characterization of their rhizobia. Plant and Soil. 357:227-243.
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2012.
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2012.
No recombination detected between potyvirus mixed infections and between potyvirus derived transgenes and heterologous challenging potyviruses. Environmental Biosafety Research. 6:207-218. Abstract
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2007.
No preferential carbon allocation to storage over growth in clipped birch and oak saplings. Tree Physiology. 40:621-636.
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2020.
No evidence requiring change in the risk assessment of Inachis io larvae. Ecological Modelling. 268:103-122.
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2013.
An NMRA-like protein regulates gene expression in Phytophthora capsici to drive the infection cycle on tomato. Molecular Plant-Microbe Interactions. 31:665-677.
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2018.
NMDA receptor-dependent regulation of miRNA expression and association with Argonaute during LTP in vivo. Frontiers in Cellular Neuroscience. 7
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2014.
Nitrous oxide mitigation in UK agriculture. Soil Science and Plant Nutrition.. 59:3-15.
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2013.
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2010.
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2013.
Nitrogen deposition enhances moss growth but leads to an overall decline in habitat condition in mountain moss-sedge heath. Global Change Biology. 18:290-300.
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2012.
Nitrogen availability alters rhizosphere processes mediating soil organic matter mineralisation. Plant and Soil. 417:499-510.
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2017.
The nitrification inhibitor dicyandiamide increases mineralisation-immobilisation turnover in slurry amended grassland soil. Journal of Agricultural Science. 152:S137-S149.
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2014.
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2022.
A new approach to simulating stream isotope dynamics using Markov switching autoregressive models. Advances in Water Resources. 46:20-30.
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2012.
A new approach to modelling the relationship between annual population abundance indices and weather data. Journal of Agricultural Biological and Environmental Statistics. 22:427-445.
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2017.
Network motifs involving both competition and facilitation predict biodiversity in alpine plant communities. Proceedings of the National Academy of Sciences of the USA (PNAS). 118:ArticleNo.e2005759118.
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2021.
Network analyses reveal novel aspects of ALS pathogenesis. PLoS Genetics. 11:e1005107.
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2015.
Nesting preferences of the threatened wood ant Formica exsecta (Hymenoptera: Formicidae): implications for conservation in Scotland. Journal of Insect Conservation.. 14(3):269-276.
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2010.
The neglected season: warmer autumns counteract harsher winters and promote growth in Arctic reindeer. Global Change Biology. 27:993-1002.
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2020.
Negative effects of the sea lice therapeutant emamectin benzoate at low concentrations on benthic communities around Scottish fish farms. Science of the Total Environment. 669:91-102.
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2019.
Nature-based interventions for improving health and wellbeing: the purpose, the people and the outcomes. Sports. 7:ArticleNo.141.
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2019.