Skip to navigation Skip to content

Publications list

Found 1648 results

Filters: First Letter Of Last Name is P  [Clear All Filters]
A B C D E F G H I J K L M N O [P] Q R S T U V W X Y Z   [Show ALL]
I
Purse BV, Falconer D, Sullivan MJ, Carpenter S, Mellor PS, Piertney SB, Mordue AJ, Albon SD, Gunn GJ, Blackwell A.  2012.  Impacts of climate, host and landscape factors on Culicoides species in Scotland. Medical and Veterinary Entomology. 26:168-177.
Marriott CA, Fisher JM, Hood K, Pakeman RJ.  2010.  Impacts of extensive grazing and abandonment on grassland soils and productivity. Agriculture, Ecosystems and Environment. 139:476-482.
Shaw RA, Elston DA, Pakeman RJ, Young MR, Iason GR.  2010.  The impacts of pollination, plant characteristics and local density on the reproductive success of a scarce plant species, Salix arbuscula. Plant Ecology. 211:367-377.
Corlett RT, Primack RB, Devictor V, Maas B, Goswami VR, Bates AE, Koh LP, Regan TJ, Loyola R, Pakeman RJ et al..  2020.  Impacts of the coronavirus pandemic on biodiversity conservation. Biological Conservation. 246:ArticleNo.UNSP108571.
O'Gorman EJ, Pichler DE, Adams G, Benstead JP, Cohen H, Craig N, Cross WF, Demars BOL, Friberg N, Gisalon GM et al..  2012.  Impacts of warming on the structure and functioning of aquatic communities: individual- to ecosystem-level responses. Chapter 2. Advances in Ecological Research. 47:81-176.
Rodriguez A, Ruiz-Ramos M, Palosuo T, Carter TR, Fronzek S, Lorite IJ, Ferrise R, Pirttioja N, Bindi M, Baranowski P et al..  2019.  Implications of crop model ensemble size and composition for estimates of adaptation effects and agreement of recommendations. Agricultural and Forest Meteorology. 264:351-362.
Farmer JE, Paterson E, Bewley RJF, Geelhoed JS, Hillier S, Meeussen JCL, Lumsdon DG, Thomas RP, Graham MC.  2006.  The implications of integrated assessment and modelling studies for the future remediation of chromite ore processing residue disposal sites. The Science of the Total Environment. 360(1-3):90-97.
Lorgen-Ritchie M, Murray AD, Ferguson-Smith AC, Richards M, Horgan GW, Phillips LH, Hoad G, Gall I, Harrison K, McNeill G et al..  2019.  Imprinting methylation in SNRPN and MEST1 in adult blood predicts cognitive ability. PLoS ONE. 14:ArticleNo.e0211799.
Bek AS, Sauer J, Thygesen MB, Duus JO, Petersen BO, Thirup S, James EK, Jensen KJ, Stougaard J, Radutoiu S.  2010.  Improved characterisation of nod factors and genetically based variation in LysM receptor domains identify amino acids expendable for nod factor recognition in Lotus spp.. Molecular Plant-Microbe Interactions. 23:58-66.
Preedy K, Brennan R, Jones H, Gordon S.  2020.  Improved models of the effects of winter chilling on blackcurrant (Ribes nigrum L.) show cultivar specific sensitivity to warm winters. Agricultural and Forest and Meteorology. 280:ArticleNo.UNSP107777.
Brooker RW, Bennett AE, Cong WF, Daniell TJ, George TS, Hallett PD, Hawes C, Iannetta PPM, Jones HG, Karley AJ et al..  2015.  Improving intercropping: a synthesis of research in agronomy, plant physiology and ecology. New Phytologist. 206:107-117.
Reed MS, Moxey A, Prager K, Hanley N, Skates J, Bonn A, Evans CD, Glenk K, Thomson K.  2014.  Improving the link between payments and the provision of ecosystem services in agri-environment schemes. Ecosystem Services. 9:44-53.
Brouwer R, Martin-Ortega J, Dekker T, Sardonini L, Andreu J, Kontogianni A, Skourtos M, Raggi M, Viaggi D, Pulido-Velazquez M et al..  2015.  Improving value transfer through socio-economic adjustments in a multicountry choice experiment of water conservation alternatives. Australian Journal of Agricultural and Resource Economics. 59:458-478.
Sayan Y, Ozkul H, Polat M, Capci T, Orskov ER.  2010.  In situ degradation characteristics as predictors of in vivo digestibility and metabolizable energy values of forages and wheat straw. Journal of Applied Animal Research. 37(1):77-81.
Naz I, Palomares-Rius JE, Saifullah, Blok V, Khan MR, Ali S, Ali S.  2013.  In vitro and in planta nematicidal activity of Fumaria parviflora (Fumariaceae) against the southern root-knot nematode Meloidogyne incognita. Plant Pathology. 62:943-952.
Pokhare SS, Habash SS, Jones JT, Elashry A, Grundler FMW.  2019.  In vitro life cycle of Heterodera sacchari on pluronic gel. Nematology. 21:573-579.
Vanga BR, Butler RC, Toth IK, Ronson CW, Pitman AR.  2012.  Inactivation of PbTopo III beta causes hyper-excision of the Pathogenicity Island HAI2 resulting in reduced virulence of Pectobacterium atrosepticum. Molecular Microbiology. 84:648-663.
Prager K, Hagemann N, Schuler J, Heyn N.  2011.  Incentives and enforcement: the institutional design and policy mix for soil conservation in Brandenburg (Germany). Land Degradation and Development, Special Issue, The Challenge of Effective Soil Conservation Policies. 22:111-123.
Colen L, Melo PC, Abdul-Salam Y, Roberts D, Mary S, Paloma GY.  2018.  Income elasticities for food, calories and nutrients across Africa: a meta-analysis. Food Policy. 77:116-132.
Alcon F, Martin-Ortega J, Pedrero F, Alarcon JJ, de Miguel MD.  2013.  Incorporating non-market benefits of reclaimed water into cost-benefit analysis: a case study of irrigated mandarin crops in southern Spain. Water Resources Management. 27:1809-1820.
Wang Z, Grant RF, Arain MA, Bernier PY, Chen B, Chen JM, Govind A, Guindon L, Kurz WA, Peng C et al..  2013.  Incorporating weather sensitivity in inventory-based estimates of boreal forest productivity: a meta-analysis of process model results. Ecological Modelling. 260:25-35.
Huaiying Y, Thornton B, Paterson E.  2012.  Incorporation of 13C-labelled rice rhizodeposition carbon into soil microbial communities under different water status. Soil Biology and Biochemistry. 53:72-77.
Pakeman RJ, Brooker RW, Karley AJ, Newton AC, Mitchell C, Hewison RL, Pollenus J, Guy DC, Schöb C.  2020.  Increased crop diversity reduces the functional space available for weeds. Weed Research.. 60:121-131.
Babikova Z, Gilbert L, Randall KC, Bruce TJA, Pickett JA, Johnson D.  2014.  Increasing phosphorus supply is not the mechanism by which arbuscular mycorrhiza increase attractiveness of bean (Vicia faba) to aphids. Journal of Experimental Botany. 65:5231-5241.
Kaczmareka M, Piotrowska MJ, Fountaine JM, Gorniak K, McGrann GRD, Armstrong A, Wright KM, Newton AC, Harvis ND.  2017.  Infection strategy of Ramularis collo-cygni and development of Ramularia leaf spot on barley and alternate graminaceous hosts. Plant Pathology. 66:45-55.
Cattadori IM, Wagner BR, Wodzinski LA, Pathak AK, Poole A, Boag B.  2013.  Infections do not predict shedding in co-infections with two helminths from a natural system. Ecology. 95:1684-1692.
Glenk K, Martin-Ortega J, Pulido-Velazquez M, Potts J.  2015.  Inferring attribute non-attendance from discrete experiments: implications for benefit transfer. Environmental and Resource Economics. 60:497-520.
Walker DM, Carmeli C, Perez-Barberia FJ, Small M, Perez-Fernandez E.  2010.  Inferring networks from multivariate symbolic time series to unravel behavioural interactions among animals. Animal Behaviour. 79(2):351-359.
Canton GJ, Katzer F, Maley SW, Bartley PM, Benavides-Silvan J, Palarea-Albaladejo J, Pang Y, Smith SH, Rocchi MS, Buxton D et al..  2014.  Inflammatory infiltration into placentas of Neospora caninum challenged cattle correlates with clinical outcome of pregnancy. Veterinary Research. 45:11.
McNamara NP, Black HIJ, Pierce TG, Reay DS, Ineson P.  2008.  The influence of afforestation and tree species on soil methane fluxes from shallow organic soils at the UK Gisburn Forest Experiment. Soil Use and Management. 24(1):1-7.
Wilson L, Wilson MJ, Green J, Patey I.  2014.  The influence of clay mineralogy on formation damage in North Sea reservoir sandstones: a review with illustrative examples. Earth Science Reviews. 134:70-80.
Singh BK, Munro S, Potts JM, Millard P.  2007.  Influence of grass species and soil type on rhizosphere microbial community structure in grassland soils. Applied Soil Ecology. 36:147-155. Abstract
Singh BK, Munro S, Potts JM, Millard P.  2007.  Influence of grass species and soil type on rhizosphere microbial community structure in grassland soils. Applied Soil Ecology. 36(2-3):147-155.
Perez-Barberia J, Ramsay SL, Hooper RJ, Perez-Fernandez E, Robertson AHJ, Aldezabal A, Goddard P, Gordon IJ.  2015.  The influence of habitat on body size and tooth wear in Scottish red deer (Cervus elaphus). Canadian Journal of Zoology. 93:61-70.
Perez-Barberia J, Ramsay SL, Hooper RJ, Perez-Fernandez E, Robertson AHJ, Aldezabal A, Goddard P, Gordon IJ.  2015.  The influence of habitat on body size and tooth wear in Scottish red deer (Cervus elaphus). (Corrigendum: vol 93, pg 61, 2015). Canadian Journal of Zoology. 93:249.
Vandenberge C, Prior G, Littlewood NA, Brooker RW, Pakeman RJ.  2009.  Influence of livestock grazing on meadow pipit foraging behaviour in upland grassland. Basic and Applied Ecology. 10:662-670.
Pedersen ML, Friberg N.  2009.  Influence of physical disturbance on habitats and biological communities in lowland streams. Fundamental and Applied Limnology. 174(1):27-41.
Poggio L, Soille P.  2012.  Influence of pit removal methods on river network position. Hydrological Processes. 26:1984-1990.
Sebert SP, Hyatt MA, Chan LLY, Yiallourides M, Fainberg HP, Patel N, Sharkey D, Stephenson T, Rhind SM, Bell RC et al..  2010.  Influence of prenatal nutrition and obesity on tissue specific fat mass and obesity-associated (FTO) gene expression. Reproduction. 139(1):265-274.
Rakhshanderhoo F, Takeshita M, Squires J, Palukaitis P.  2009.  The influence of RNA-dependent RNA polymerase 1 on Potato virus Y infection and on other antiviral response genes. Molecular Plant-Microbe Interactions. 22:1312-1318.
Blok V, Kaczmarek A, Palomares-Rius JE.  2011.  Influence of temperature on the life-cycle of Globodera spp. Communications in Agricultural and Applied Biological Sciences. 76:307-310.
Prashar A, Yildiz J, Bryan GJ, McNicol JW, Jones HG.  2013.  Infra-red thermography for high throughput field phenotyping in Solanum tuberosum. PLoS ONE. 8:e65816.
Ritchie F, Bain RA, Lees AK, Boor TRW, Paveley ND.  2018.  Integrated control of potato late blight: predicting the combined efficacy of host resistance and fungicides. Plant Pathology. 67:1784-1791.
Correia B, Valledor L, Hancock RD, Renaut J, Pascual J, Soares AMVM, Pinto G.  2016.  Integrated proteomics and metabolomics to unlock global and clonal responses of Eucalyptus globulus recovery from water deficit. Metabolomics. 12:ArticleNo.141.
Reed M, Curtis T, Gosal A, Kendall H, Andersen S, Ziv G, Attle A, Fitton R, Hay M, Gibson A et al..  2022.  Integrating ecosystem markets to coordinate landscapescale public benefits from nature. Published in PLOSONE on 12th Jan 2022. Citation: Reed MS, Curtis T, Gosal A, Kendall H, Andersen SP, Ziv G, et al. (2022) Integrating ecosystem markets to co-ordinate landscape-scale public benefits from nature. PLoS ONE 17(1): e0258334. https://doi.
Slater AM, Irvine KN, Byg AA, Davies IM, Gubbins M, Kafas A, Kenter J, MacDonald A, O'Hara Murray R, Potts T et al..  2020.  Integrating stakeholder knowledge through modular cooperative participatory processes for marine spatial planning outcomes (CORPORATES). Ecosystem Services. 44:ArticleNo.101126.
Peukert S, Griffith BA, Murray PJ, Macleod CJA, Brazier RE.  2014.  Intensive management in grasslands causes diffuse water pollution at the farm scale. Journal of Environmental Quality. 43:2009-2023.
Penrose B, Payne KAJN, Arkhipov A, Maksimenko A, Gaschak S, Meacham MC, Crout NJM, White PJ, Beresford NA, Broadley MR.  2016.  Inter-cultivar variation in soil-to-plant transfer of radiocaesium and radiostrontium in Brassica oleracea. Journal of Environmental Radioactivity. 155:112-121.
Halas S, Skrzypek G, Meier-Augenstein W, Pelc A, Kemp HF.  2011.  Inter-laboratory calibration of new silver orthophosphate comparison materials for stable oxygen isotope analysis of phosphates. Rapid Communications in Mass Spectrometry. 25:579-584.
Creamer RE, Bellamy P, Black HIJ, Cameron CCCD, Chamberlain P, Harris J, Parekh N, Pawlett M, Poskitt J, Stone D et al..  2009.  An inter-laboratory comparison of multi-enzyme and multiple substrate-induced respiration assays to assess method repeatability in soil monitoring. Biology and Fertility of Soils. 45(6):623-633.
Boilard G, Bradley RL, Paterson E, Sim A, Brown LK, George TS, Bainard L, Carubba A.  2019.  Interaction between root hairs and soil phosphorus on rhizosphere priming of soil organic matter. Soil Biology and Biochemistry. 135:264-266.
Pilgrim ES, Macleod CJA, Blackwell MSA, Bol R, Hogan DV, Chadwick DR, Cardenas L, Misselbrook TH, Haygarth PM, Brazier RE et al..  2010.  Interactions among agricultural production and other ecosystem services delivered from European temperate grassland systems. Advances in Agronomy. 109:117-154.
Stott AW, Ahmadi BV, Dwyer CM, Kupiec B, Morgan-Davies C, Milne CE, Ringrose S, Goddard P, Phillips K, Waterhouse A.  2012.  Interactions between profit and welfare on extensive sheep farms. Animal Welfare. 21:57-64.
Helliwell RC, Britton AJ, Gibbs S, Fisher JM, Potts JM.  2010.  Interactive effects of N deposition, land management and weather patterns on soil solution chemistry in a Scottish alpine heath. Ecosystems. 13:696-711.
Helliwell RC, Britton AJ, Gibbs S, Fisher JM, Potts JM.  2010.  Interactive effects of nitrogen deposition, land management and weather on soil solution chemistry in a Scottish low-alpine heath. Ecosystems. 13(5):696-711.
Brandmeier J, Reininghaus H, Pappagallo S, Karley AJ, Kiaer LP, Scherber C.  2021.  Intercropping in high input agriculture supports arthropod diversity without risking significant yield losses. Basic and Applied Ecology. 53:26-38.
Bournaud C, James EK, de Faria SM, Lebrun M, Melkonian R, Duponnois R, Tisseyre P, Moulin L, Prin Y.  2018.  Interdependency of efficient nodulation and arbuscular mycorrhization in Piptadenia gonoacantha, a Brazilian legume tree. Plant Cell and Environment. 41:2008-2020.
Weatherall A, Proe MF, Craig J, Cameron AD, Midwood AJ.  2006.  Internal cycling of nitrogen, potassium and magnesium in young Sitka spruce. Tree Physiology. 26:673-680.
McKeown NK, Bishop JL, Cuadros J, Hillier S, Amador E, Makarewicz HD, Parente M, Silver EA.  2011.  Interpretation of reflectance spectra of clay mineral-silica mixtures: implications for Martian clay mineralogy at Mawrth Vallis. Clays and Clay Minerals. 59:400-415.
van Veelen B, Rella L, Aiken GT, Judson E, Gambino E, Jenss A, Parashar A, Pinker A.  2021.  Interventions on democratizing infrastructure. Political Geography. 87:ArticleNo.102378.
Schoeb C, Kerle S, Karley AJ, Morcillo L, Pakeman RJ, Newton AC, Brooker RW.  2015.  Intraspecific genetic diversity and composition modify species-level diversity-productivity relationships. New Phytologist. 205:720-730.
Poggio L, Vrscaj B, Hepperle E, Schulin R, Marsan FA.  2008.  Introducing a method of human health risk evaluation for planning and soil quality management of heavy metal-polluted soils - An example from Grugliasco (Italy). Landscape and Urban Planning. 88(2-4):64-72.
Maclean JE, Mitchell RJ, Burslem DFRP, Genney D, Hall J, Pakeman RJ.  2018.  Invasion by Rhododendron ponticum depletes the native seed bank with long-term impacts after its removal. Biological Invasions. 20:375-384.
Gehlot HS, Tak N, Kaushik M, Mitra S, Chen WM, Poweleit N, Panwar D, Poonar N, Parihar R, Tak A et al..  2013.  An invasive Mimosa in India does not adopt the symbionts of its native relatives. Annals of Botany. 112:179-186.
Brooks DR, Clark SJ, Perry JN, Bohan DA, Champion GT, Firbank LG, Haughton AJ, Hawes C, Heard MS, Woiwod IP.  2005.  Invertebrate biodiversity in maize following withdrawal of triazine herbicides. Proceedings of the Royal Society of London, Series B. 272:1497-1502. Abstract
Littlewood NA, Nau BS, Pozsgai G, Stockan JA, Stubbs A, Young MR.  2015.  Invertebrate species at risk from ash dieback in the UK. Journal of Insect Conservation. 19:75-85.
Singh BK, Munro S, Reid E, Ord B, Potts JM, Paterson E, Millard P.  2006.  Investigating microbial community structure in soils by physiological, biochemical and molecular fingerprinting methods. European Journal of Soil Science. 57:72-82.
Irvine RJ, Moseley M, Leckie F, Martinez-Padilla, J.; Millan J, Donley D, Miller A, Pound M, Mougeot F.  2014.  Investigating the loss of recruitment potential in red grouse (Lagopus lagopus scoticus): the relative importance of hen mortality, food supply, tick infestation and louping-ill. European Journal of Wildlife Research. 60:313-322.
Cameron AR, Logie L, Patel K, Bacon S, Forteath C, Harthill J, Roberts A, Sutherland CD, Stewart D, Viollet B et al..  2016.  Investigation of salicylate hepatic responses in comparison with chemical analogues of the drug. Biochimica et Biophysica Acta - Molecular Basis of Disease. 1862:1412-1422.
Castelli L, Bryan GJ, Blok VC, Ramsay G, Sobczak M, Gillespie T, Phillips MS.  2006.  Investigations of Globodera pallida invasion and syncytia formation within roots of the susceptible potato cultivar D. Nematology. 8:103-110. Abstract
Gilroy EM, Hein I, van der Hoorn R, Boevink P, Venter E, McLellan H, Kaffarnik F, Hrubikova K, Shaw J, Holeva MC et al..  2007.  Involvement of cathepsin B in the plant disease resistance hypersensitive response. Plant Journal. 52:1-13. Abstract
Yang X, Lu Y, Wang F, Chen Y, Tian Y, Jiang L, Pemg J, Zheng H, Lin Lin CY, Taliansky M et al..  2020.  Involvement of the chloroplast gene ferredoxin 1 in multiple responses of N. benthamiana to Potato virus X infection. Journal of Experimental Botany. Published online..
Yang X, Lu YW, Wang F, Chen Y, Tian YZ, Jiang LL, Pemg JJ, Zheng HY, Lin L, Yan CQ et al..  2020.  Involvement of the chloroplast gene ferredoxin 1 in multiple responses of Nicotiana benthamiana to Potato virus X infection. Journal of Experimental Botany. 71:2142-2156.
Pozsgai G, Lövei G, Vasseur L, Gurr G, Batáry P, Korponai J, Littlewood NA, Liu J, Mora A, Obrycki J et al..  2021.  Irreproducibility in searches of scientific literature: A comparative analysis. Nature Methods. 11:14658-14668.
Rasmussen CL, Palarea-Albaladejo J, Korshoj M, Gupta N, Nabe-Nielsen K, Holtermann A, Jorgensen MB.  2019.  Is high aerobic workload at work associated with leisure time physical activity and sedentary behaviour among blue-collar workers? A compositional data analysis based on accelerometer data PLoS ONE. 14:ArticleNo.e0217024.
Phillip S, Dandy N, Gill R, MacMillan DC.  2009.  Is legislation a barrier to the sustainable management of game species? A case study of wild deer in Britain Journal of Environmental Planning and Management. 52(8):993-1012.
Greenfield LM, Hill PW, Seaton FM, Paterson E, Baggs EM, Jones DL.  2020.  Is soluble protein mineralisation and protease activity in soil regulated by supply or demand? Soil Biology and Biochemistry. 150:ArticleNo.108007..
Pakeman RJ, Pugnaire F, Michalet R, Lortie C, Schiffers K, Maestre F, Travis J.  2009.  Is the cask of facilitation ready for bottling? A symposium on the connectivity and future directions of positive plant interactions Biology Letters. 5(5):577-579.
Mitchell RJ, Hester AJ, Campbell CD, Chapman SJ, Cameron CM, Hewison RL, Potts JM.  2010.  Is vegetation composition or soil chemistry the best predictor of the soil microbe community? Plant and Soil. 333:417-430.
Mitchell RJ, Hester AJ, Campbell CD, Chapman SJ, Cameron CM, Hewison RL, Potts JM.  2010.  Is vegetation composition or soil chemistry the best predictor of the soil microbial community? Plant and Soil. 333(1-2):417-430.
Izquierdo LR, Polhill JG.  2006.  Is your model susceptible to floating-point errors? Journal of Artificial Societies and Social Simulation. 9(4):4.
Littlewood NA, Pakeman RJ, Woodin SJ.  2009.  Isolation of habitat patches limits colonisation by moorland Hemiptera. Journal of Insect Conservation. 13:29-36.
Gonzalez-Redin J, Polhill JG, Dawson TP, Hill R, Gordon IJ.  2018.  It's not the 'what', but the 'how': Exploring the role of debt in natural resource (un)sustainability. PLoS ONE. 13:ArticleNo.e0201141.
K
Ayllón D, Railsback SF, Gallagher C, Augusiak J, Baveco H, Berger U, Charles S, Martin R, Focks A, Galic N et al..  2021.  Keeping modelling notebooks with TRACE: good for you and good for environmental research and management support. Environmental Modelling and Software. 136:ArticleNo.104932.
Jungsberg L, Copus A, Herslund LB, Nilsson K, Perjo L, Randall L, Berlina A.  2020.  Key actors in community-driven social innovation in rural areas in the Nordic countries. Journal of Rural Studies. 79:276-285.
Fazey I, Evely AC, Reed MR, Stringer LC, Kruijsen JHJ, White PCL, Newsham A, Jin L, Cortazzi M, Phillipson J et al..  2013.  Knowledge Exchange: a review and research agenda for environmental management. Environmental Conservation. 40:19-36.
Metzger MJ, Dick J, Gardner A, Bellamy C, Blackstock KL, Brown C, Chisholm R, Cochrane P, Drewitt J, Gimona A et al..  2019.  Knowledge sharing, problem solving and professional development in a Scottish ecosystem services community of practice. Regional Environmental Change. Published online..
L
Hancock RD, Walker PG, Pont SDA, Marquis N, Vivera S, Gordon SL, Brennan RM, Viola R.  2007.  L-Ascorbic acid accumulation in fruit of Ribes nigrum occurs by in situ biosynthesis via the L-galactose pathway. Functional Plant Biology. 34:1080-1091. Abstract
Paterson E, Osler GHR, Dawson LA, Gebbing T, Sim A, Ord B.  2008.  Labile and recalcitrant plant fractions are utilised by distinct microbial communities in soil: independent of the presence of roots and mycorrhizal hyphae. Soil Biology and Biochemistry. 40:1103-1113.
Perez-Espona S, Perez-Barberia FJ, McLeod J, Jiggins CJ, Gordon IJ, Pemberton J.  2008.  Landscape features affect gene flow of Scottish Highland red deer (Cervus elaphus). Molecular Ecology. 17(4):981-996.
Perez-Espona S, McLeod JE, Franks NR.  2012.  Landscape genetics of a top neotropical predator. Molecular Ecology. 21:5969-5985.
Millins C, Dickinson ER, Isakovic P, Gilbert L, Wojciechowska A, Paterson V, Tao F, Jahn M, Kilbride E, Birtles R et al..  2018.  Landscape structure affects the prevalence and distribution of a tick-borne zoonotic pathogen. Parasites and Vectors. 11:ArticleNo.621.
Moore EK, Britton AJ, Iason GR, Pemberton JM, Pakeman RJ.  2015.  Landscape-scale vegetation patterns influence small-scale grazing impacts. Biological Conservation. 192:218-225.
Vorstius C, Rowan JS, Brown I, Frogbrook Z, Palarea-Albaladejo J.  2019.  Large-scale risk screening of raw water quality in the context of drinking water catchments and integrated response strategies. Environmental Science and Policy. 100:84-93.
Allcroft DJ, Glasbey CA, Paulo MJ.  2007.  A latent Gaussian model for multivariate consumption data. Food Quality and Preference. 18:508-516. Abstract
Pakeman RJ, Eastwood A, Scobie A.  2011.  Leaf dry matter content as a predictor of grassland litter decomposition: a test of the "Mass Ratio Hypothesis". Plant and Soil. 342:49-57.
Fortunel C, Garnier E, Joffre R, Kazakou E, Quested H, Grigulis K, Lavorel S, Ansquer P, Castro H, Cruz P et al..  2009.  Leaf traits capture the effects of land use changes and climate on litter decomposability of grasslands across Europe. Ecology. 90(3):598-611.
Preedy K, Chaplain M, Leybourne D, Marion G, Karley AJ.  2020.  Learning-induced switching costs in a parasitoid can maintain diversity of host aphid phenotypes although biocontrol is destabilised under abiotic stress. Journal of Animal Ecology.. 89:1216-1229.
Poggio L, Gimona A, Aalders IH, Morrice J, Hough RL.  2020.  Legacy data for 3D modelling of peat properties with uncertainty estimation in Dava bog - Scotland.using legacy data. Geoderma Regional. 22:ArticleNo.e00288.
Edwards P, Pignotti E, Mellish C, Eckhardt A, Ponnamperuma K, Bouttaz T, Philip L, Pangbourne K, Polhill JG, Gotts NM.  2014.  Lessons learnt from the deployment of a semantic virtual research environment. Journal of Web Semantics. 27-28:70-77.
Castelli L, Bryan GJ, Blok VC, Ramsay G, Phillips MS.  2005.  Life stage responses observed amongst fifteen wild Solanum species to resistant Globodera pallida. Nematology. 7:701-711. Abstract
Godoy Herz MA, Kubaczka MG, Brzyzek G, Servi L, Krzyszton M, Simpson C, Brown J, Swiezewski S, Petrillo E, Kornblihtt AR.  2019.  Light regulates plant alternative splicing through the control of transcriptional elongation. Molecular Cell. 73:1066-1074.e3.
Holland JE, Bennett AE, Newton AC, White PJ, McKenzie BM, George TS, Pakeman RJ, Bailey JS, Fornara DA, Hayes RC.  2018.  Liming impacts on soils, crops and biodiversity in the UK: a review. Science of the Total Environment. 610-611:316-332.
Koehler MC, Stüeken, E.E, Hillier S, Prave T.  2019.  Limitation of fixed nitrogen and deepening of the carbonate-compensation depth through the Hirnantian at Dob’s Linn Scotland. Palaeogeography, Palaeoclimatology, Palaeoecology. 534:Articleno.109321..
Dawson JJC, Campbell CD, Towers W, Cameron CM, Paton GI.  2006.  Linking biosensor responses to Cd, Cu and Zn partitioning in soils. Environmental Pollution. 142(3):493-500.
Pakeman RJ, Hewison RL, Lewis RJ.  2017.  Linking functional traits and species preferences to species’ abundance and occupancy trends through time to identify habitat changes in coastal ecosystems. Perspectives in Plant Ecology, Evolution and Systematics. 27:35-44.
Yao H, Gao Y, Nicol GW, Campbell CD, Prosser JI, Zhang L, Han W, Singh BK.  2011.  Links between ammonia oxidizer community structure, abundance and nitrification potential in acidic soils. Applied and Environmental Microbiology. 77:4618-4625.
Nunan N, Daniell TJ, Singh BK, Papert A, McNicol JW, Prosser JI.  2005.  Links between plant and rhizoplane bacterial communities in grassland soils, characterized using molecular techniques. Applied and Environmental Microbiology. 71:6784-6792. Abstract
Braga RA, Dupuy L, Pasqual M, Cardoso RR.  2009.  Live biospeckle laser imaging of root tissues. European Biophysics Journal. 38:679-686. Abstract
Pakeman RJ, Fielding DA, Everts L, Littlewood NA.  2019.  Long term impacts of changed grazing regimes on the vegetation of heterogeneous upland grasslands. Journal of Applied Ecology. 56:1794-1805.
Pozsgai G, Baird J, Littlewood NA, Pakeman RJ, Young M.  2016.  Long-term changes in ground beetle (Coleoptera: Carabidae) assemblages in Scotland. Ecological Entomology. 41:157-167.
Perez-Barberia FJ, Hooper RJ, Gordon IJ.  2013.  Long-term density-dependent changes in habitat selection in red deer (Cervus elaphus). Oecologia. 173:837-847.
Macdonald CA, Singh BK, Peck JA, van Schaik AP, Hunter LC, Horswell J, Campbell CD, Speir TW.  2007.  Long-term exposure to Zn-spiked sewage sludge alters soil community structure. Soil Biology and Biochemistry. 39(10):2576-2586.
Pakeman RJ, Hewison RL, Riach D, Fisher J, Hurskianen S, Fielding D, Mitchell RJ.  2017.  Long-term functional structure and functional diversity changes in Scottish grasslands. Agriculture, Ecosystems and Environment. 247:352-362.
Marriott CA, Hood K, Fisher JM, Pakeman RJ.  2009.  Long-term impacts of extensive grazing and abandonment on the species composition, richness, diversity and productivity of agricultural grassland. Agriculture, Ecosystems and Environment.. 134:190-200.
Pakeman RJ, Alexander J, Brooker R, Cummins R, Fielding D, Gore S, Hewison R, Mitchell R, Moore E, Erford K et al..  2016.  Long-term impacts of nitrogen deposition on coastal plant communities. Environmental Pollution. 221:337-347.
Phuyal M, Artz RRE, Sheppard L, Johnson D.  2008.  Long-term nitrogen deposition increases phosphorus limitation of bryophytes in an ombrotrophic bog. Plant Ecology. 196(1):111-121.
Pakeman RJ, Hewison RL, Riach D, Fisher J, Hurskianen S, Fielding D, Mitchell RJ.  2017.  Long-term structural and functional diversity changes in Scottish grasslands. Agriculture, Ecosystems and Environment. 247:352-362.
Baggaley NJ, Langan SJ, Futter MN, Potts JM, Dunn SM.  2009.  Long-term trends in hydro-climatology of a major Scottish mountain river. Science of the Total Environment. 407:4633-4641.
Baggaley NJ, Langan SJ, Futter MN, Potts JM.  2009.  Long-term trends in hydroclimatology of a Scottish mountain river. The Science of the Total Environment. 407(16):4633-4641.
Hester AJ, Britton AJ, Hewison RL, Ross L, Potts J.  2019.  Long-term vegetation change in Scotland's native forests. Biological Conservation. 235:136-146.
Haanes H, Roed KH, Perez-Espona S, Rosef O.  2011.  Low genetic variation support bottlenecks in Scandinavian red deer. European Journal of Wildlife Research. 57:1137-1150.
Evans DM, Redpath SM, Evans SA, Elston DA, Gardner CJ, Dennis P, Pakeman RJ.  2006.  Low intensity, mixed livestock grazing improves the breeding abundance of a common insectivorous passerine. Biology Letters. 2(4):636-638.
Irvine RJ, Corbishley H, Pilkington JG, Albon SD.  2006.  Low level parasitic worm burdens reduce body condition in free ranging red deer (Cervus elaphus). Parasitology. 133(4):465-475.
Sulpice R, Ishihara H, Schlereth A, Cawthray GR, Encke B, Giavalisco P, Ivakov A, Arrivault S, Jost R, Krohn N et al..  2014.  Low levels of ribosomal RNA partly account for the very high photosynthetic phosphorus-use efficiency of Proteaceae species. Plant Cell and Environment. 37:1276-1298.
Kim M, Brodersen KE, Szabo M, Larkum AWD, Raven JA, Ralph PJ, Pernice M.  2018.  Low oxygen affects photophysiology and the level of expression of two-carbon metabolism genes in the seagrass Zostera muelleri. Photosynthesis Research. 136:147-160.
M
Hurst CH, Turnbull D, Plain F, Fuller W, Hemsley PA.  2017.  Maleimide scavenging enhances determination of protein S-palmitoylation state in acyl-exchange methods. Biotechniques. 62:69-75.
Mann AN, O'Reilly-Wapstra JM, Iason GR, Sanson G, Davies NW, Tilyard P, Williams D, Potts BM.  2012.  Mammalian herbivores reveal marked genetic divergence between populations of an endangered plant species. Oikos. 121:268-276.
van der Zee R, Pisa L, Andonov S, Brodschneider R, Charriere JD, Chlebo R, Coffey MF, Crailsheim K, Dahle B, Gajde A et al..  2012.  Managed honey bee colony losses in Canada, China, Europe, Israel and Turkey, for the winters of 2008-9 and 2009-10. Journal of Agricultural Research. 51:91-114.
Pohle I, Gädeke A, Schümberg S, Hinz C, Koch H.  2019.  Management influences on stream-flow variability in the past and under potential climate change in a Central European mining region. Water Resources Management. 33:5191-5206.
Comadran J, Russell JR, van Eeuwijk FA, Ceccarelli S, Grando S, Baum M, Stanca AM, Pecchioni N, Mastrangelo AM, Akar T et al..  2008.  Mapping adaptation of barley to droughted environments. Euphytica. 161:35-45. Abstract
Hewitt RJ, Pera FA, Garcia-Martin M, Gaudry-Sada KH, Hernandez-Jimenez V, Bieling C.  2020.  Mapping adolescents' sense of place and perceptions of change in an urban-rural transition. Environmental Management. 65:334-354.
Rutgers M, Orgiazzi A, Gardi C, Rombke J, Jansch S, Keith AM, Neilson R, Boag B, Schmidt O, Murchie AK et al..  2015.  Mapping earthworm communities in Europe. Applied Soil Ecology. 97:98-111.
Rutgers M, Orgiazzi A, Gardi C, Rombke J, Jansch S, Keith AM, Neilson R, Boag B, Schmidt O, Murchie AK et al..  2016.  Mapping earthworm communities in Europe. Applied Soil Ecology. 97:98-111.
Hastings E, Potts T.  2013.  Marine litter: Progress in developing an integrated policy approach in Scotland. Marine Policy. 42:49-55.
Perez-Barberia FJ, Walker DM, Marion G.  2007.  Maximising intake under challenging foraging conditions at two hierarchical spatial scales in males and females of Soay sheep. Animal Behaviour. 73(2):339-348.
Tipping E, Davies JAC, Henrys PA, Jarvis SG, Rowe EC, Smart SM, Le Duc MG, Marrs RH, Pakeman RJ.  2019.  Measured estimates of semi-natural terrestrial NPP in Great Britain: comparison with modelled values, and dependence on atmospheric nitrogen deposition. Biogeochemistry. 144:215-227.
Davis NA, Polhill JG, Aitkenhead MA.  2021.  Measuring heterogeneity in soil networks: a network analysis and simulation-based approach. Ecological Modelling. 439:ArticleNo.109308.
Bull DJ, Smethurst JA, Sinclair I, Pierron F, Roose T, Powrie W, Bengough AG.  2020.  Mechanisms of root reinforcement in soils: an experimental methodology using four-dimensional X-ray computed tomography and digital volume correlation. Proceedings of the Royal Society A - Mathematicla Physical and Engineering Science. 476:ArticleNo.20190838.
Prorok VV, Dacenko OI, Bulavin LA, Poperenko LV, White PJ.  2016.  Mechanistic interpretation of the varying selectivity of Cesium-137 and potassium uptake by radish (Raphanus sativus L.) under field conditions near Chernobyl. Journal of Environmental Radioactivity. 152:85-91.
Aponte H, Meli P, Butler BM, Paolini J, Matus F, Merino C, Cornejo P, Kuzyakov Y.  2020.  Meta analysis of heavy metal effects on soil enzyme activities. Science of the Total Environment. 737:ArticleNo.139744.
Aponte H, Meli P, Butler BM, Paolini J, Matus F, Merino C, Cornejo P, Kuzyakov Y.  2020.  Meta-analysis of heavy metal effects on soil enzyme activities. Science of the Total Environment. 737:ArticleNo.139744.
Prigigallo MI, Abdelfattah A, Cacciola SO, Faedda R, Sanzani SM, Cooke DEL, Schena L.  2016.  Metabarcoding analysis of phytophthora diversity using genus-specific primers and 454 pyrosequencing. Phytopathology. 106:305-313.
Riddell CE, Frederickson-Matika D, Armstrong AC, Elliot M, Forster J, Hedley PE, Morris J, Thorpe P, Cooke DEL, Pritchard L et al..  2019.  Metabarcoding reveals a high diversity of woody host-associated Phytophthora spp. in soils at public gardens and amenity woodlands in Britain. PeerJ. 7:ArticleNo.e6931.
Driver T, Bajhaiya AK, Allwood JW, Goodacre R, Pittman JK, Dean AP.  2015.  Metabolic responses of eukaryotic microalgae to environmental stress limit the ability of FT-IR spectroscopy for species identification. Algal Research- Biomass Biofuels and Bioproducts. 11:148-155.
Lapierre H, Vazquez-Anon M, Parker D, Dubreuil P, Holtrop G, Lobley GE.  2011.  Metabolism of 2-hydroxy-4-(methylthio)butanoate (HMTBA) in lactating dairy cows. Journal of Dairy Science. 94:1526-1535.
Beleggia R, Platani C, Papa R, Di Chio A, Barros E, Mashaba C, Wirth J, Fammartino A, Sautter C, Conner S et al..  2011.  Metabolomics and food processing: from semolina to pasta. Journal of Agricultural and Food Chemistry. 59:9366-9377.
Joynson R, Pritchard L, Osemwekha E, Ferry N.  2017.  Metagenomic analysis of the gut microbiome of the common black slug arion ater in search of novel lignocellulose degrading enzymes. Frontiers in Microbiology. 9:ArticleNo.2181.
Cameron A, Logie L, Patel K, Erhardt S, Bacon S, Middleton P, Harthill J, Forteath C, Coats JT, Kerr C et al..  2018.  Metformin selectively targets redox control of complex I energy transduction. Redox Biology. 14:187-197.
Cameron A, Logie L, Patel K, Erhardt S, Bacon S, Middleton P, Harthill J, Forteath C, Coats JT, Kerr C et al..  2018.  Metformin selectively targets redox control of complex I energy transduction. Redox Biology. 14:187-197.
Williams D, Britten A, McCallum S, Jones H, Aitkenhead M, Karley A, Loades K, Prashar A, Graham J.  2017.  A method for automatic segmentation and splitting of hyperspectral images of raspberry plants collected in field conditions. Plant Methods. 13:ArticleNo.74.
Belzunce-Segarra MJ, Prego R, Wilson MJ, Bacon J, Santos-Echeand J.  2008.  Method speciation in surface sediments of the Vigo Ria (NW Iberian Peninsula). Scientia Marina. 72:119-126.
Greenfield LM, Hill PW, Paterson E, Baggs EM, Jones DL.  2018.  Methodological bias associated with soluble protein recovery from soil. Scientific Reports. 8:ArticleNo.11186.
Jiang N, Leach LJ, Hu X, Potokina E, Jia T, Druka A, Waugh R, Kearsey MJ, Luo ZW.  2008.  Methods for evaluating gene expression from Affymetrix microarray datasets. BMC Bioinformatics. 9:-284. Abstract
Buccianti A, Nisi B, Martin-Fernandez JA, Palarea-Albaladejo J.  2014.  Methods to investigate the geochemistry of groundwaters with values for nitrogen compounds below the detection limit. Journal of Geochemical Exploration. 141:78-88.
Sanchez SE, Petrillo E, Beckwith EJ, Zhang X, Rugnone ML, Hernando CE, Cuevas JC, Godoy Herz MA, Depetris-Chauvin A, Simpson CG et al..  2010.  A methyl transferase links the circadian clock to the regulation of alternative splicing. Nature. 468:112-116.
Rowe EC, Jones L, Dise NB, Evans CD, Mills G, Hall J, Stevens CJ, Mitchell RJ, Field C, Caporn SJ et al..  2017.  Metrics for evaluating the ecological benefits of decreased nitrogen deposition. Biological Conservation. 212:454-463.
van der Heijden GA, Legout A, Midwood AJ, Craig CA, Pollier B, Ranger J, Dambrine E.  2013.  Mg and Ca root uptake and vertical transfer in soils assessed by an in situ ecosystem scale multi-isotopic (26Mg & 44Ca) tracing experiment in a beech stand (Breuil-Chenue, France). Plant and Soil. 369:33-45.
Adediran GA, Lundberg D, Almkvist G, Pradas del Real AE, Klysubun W, Hillier S, Gustafsson JP, Simonsson M.  2021.  Micro and nano sized particles in leachates from agricultural soils: phosphorus and sulfur speciation by x-ray micro-spectroscopy. Water Research. 189:ArticleNo.116585.
Pritchard L, Liu H, Booth C, Douglas E, Fran P, Schrenzel J, Hedley PE, Birch PRJ, Toth IK.  2009.  Microarray comparative genomic hybridisation analysis incorporating genomic organisation, and application to enterobacterial plant pathogens. PLoS Computational Biology. 5:-e1000473.
Roberts WM, Matthews RA, Blackwell MSA, Peukert S, Collins AL, Stutter MI, Haygarth PM.  2013.  Microbial biomass phosphorus contributions to phosphorus solubility in riparian vegetated buffer strip soils. Biology and Fertility of Soils. 49:1237-1241.
Garcia-Pausas J, Paterson E.  2011.  Microbial community abundance and structure are determinants of soil organic matter mineralisation in the presence of labile carbon. Soil Biology and Biochemistry. 43:1705-1715.
Yuangen Y, Campbell CD, Clark L, Cameron CM, Paterson E.  2006.  Microbial indicators of heavy metal contamination in urban and rural soils. Chemosphere. 63(11):1942-1952.
Vinten AJA, Potts JM, Avery L, Strachan NJC.  2009.  Microbial pollution of water by livestock: approaches to risk assessment and mitigation. Animal. 3:744-752.
Vinten AJA, Avery LM, Potts JM, Strachan N.  2009.  Microbial pollution of water by livestock: approaches to risk assessment and mitigation. Animal. 3(5):744-752.
Gontikaki E, Polymenakou PN, Thornton B, Narayanaswamy BE, Black K, Tselepides A, Witte U.  2012.  Microbial response to organic matter enrichment in the oligotrophic Levantine Basin (Eastern Mediterranean). Geomicrobiology Journal. 29:648-655.
Dungait JAJ, Ghee C, Rowan JS, McKenzie BM, Hawes C, Dixon ER, Paterson E, Hopkins DW.  2013.  Microbial responses to the erosional redistribution of soil organic carbon in arable fields. Soil Biology and Biochemistry. 60:195-201.
Pan FX, Li YY, Chapman SJ, Khan S, Yao HY.  2016.  Microbial utilization of rice straw and its derived biochar in a paddy soil. Science of the Total Environment.
Dupuy LX, Mimault M, Patko D, Ladmiral V, Ameduri B, MacDonald MP, Ptashnyk M.  2018.  Micromechanics of root development in soil. Current Opinion in Genetics and Development. 51:18-25.
Malloch G, Highet F, Kasprowicz L, Pickup J, Neilson R, Fenton B.  2006.  Microsatellite marker analysis of peach-potato aphids (Myzus persicae, Homoptera: Aphididae) from Scottish suction traps. Bulletin of Entomological Research. 96:573-582. Abstract
Shaw RF, Pakeman RJ, Young MR, Iason GR.  2013.  Microsite affects willow sapling recovery from bank vole (Myodes glareolus) herbivory, but does not affect grazing risk. Annals of Botany. 112:731-739.
Smith SW, Robertson AHJ, Meharg AA, Pakeman RJ, Johnson D, Woodin SJ, van der Wal R.  2013.  Milling plant and soil material in plastic tubes over-estimates carbon and under-estimates nitrogen concentrations. Plant and Soil. 369:509-513.
Pariser EC, Gilbert L, Hazon N, Arnold KE, Graves JA.  2012.  Mind the gap: the ration of yolk androgens and antioxidants varies between sons and daughters dependent on paternal attractiveness. Behavioral Ecology and Sociobiology. 66:519-527.
Pongrac P, McNicol JW, Lilly A, Thompson JA, Wright G, Hillier S, White PJ.  2018.  Mineral element composition of cabbage as affected by soil type and phosphorus and zinc fertilisation. Plant and Soil. Published online..
Pongrac P, McNicol JW, Lilly A, Thompson JA, Wright G, Hillier S, White PJ.  2019.  Mineral element composition of cabbage as affected by soil type and phosphorus and zinc fertilisation. Plant and Soil. 434:151-165.
Butler BM, Palarea-Albaladejo J, Shepherd KD, Nyambura KM, Towett EK, Sila AM, Hillier S.  2020.  Mineral-nutrient relationships in African soils assessed using cluster analysis of X-ray powder diffraction patterns and compositional methods. Geoderma. 375:Article114474.
Pasternak Z, Luchibia AO, Matan O, Dawson LA, Gafny R, Shpitzen M, Avraham S, Jurkevitch E.  2018.  Mitigating temporal mismatches in forensic soil microbial profiles. Australian Journal of Forensic Sciences. Published online..
Pasternak Z, Luchibia AO, Matan O, Dawson LA, Gafny R, Shpitzen M, Avraham S, Jurkevitch E.  2019.  Mitigating temporal mismatches in forensic soil microbial profiles. Australian Journal of Forensic Sciences. 51:685-694.
Palomares-Rius JE, Cantalapiedra-Navarette C, Archidona-Yuste A, Blok VC, Castillo P.  2017.  Mitochondrial genome diversity in dagger and needle nematodes (Nematode: Longidoridae). Scientific Reports. 7
Phillips WS, Brown AMV, Howe DK, Peetz AB, Blok VC, Denver DR, Zasada IA.  2016.  The mitochondrial genome of Globodera ellingtonae is composed of two circles with segregated gene content and differential copy numbers. BMC Genomics. 17:ArticleNo.706..
Palomares-Rius JE, Cantalapiedra-Navarette C, Archidona-Yuste A, Blok VC, Castillo P.  2017.  Mitochondrial genomes diversity in dagger and needle nematodes (Nematode: Longidoridae). Scientific Reports. 7
Gibson T, Blok VC, Phillips MS, Hong G, Kumarasinghe D, Riley IT, Dowton M.  2007.  The mitochondrial subgenomes of the nematode Globodera pallida are mosaics: Evidence of recombination in an animal mitochondrial genome. Journal of Molecular Evolution. 64:463-471. Abstract
Comadran J, Russell JR, Booth A, Pswarayi A, Ceccarelli S, Grando S, Stanca AM, Pecchioni N, Akar T, Al-Yassin A et al..  2011.  Mixed model association scans of multi-environmental trial data reveal major loci controlling yield and yield related traits in Hordeum vulgare in Mediterranean environments. Theoretical and Applied Genetics. 122:1363-1373.
Schmidt S, Raven JA, Paungfoo-Lonhienne C.  2013.  The mixotrophic nature of photosynthetic plants. Functional Plant Biology. 40:425-438.

Printed from /publications/publications-list/ag/P?page=4&sort=title&order=asc on 29/11/23 02:42:16 AM

The James Hutton Research Institute is the result of the merger in April 2011 of MLURI and SCRI. This merger formed a new powerhouse for research into food, land use, and climate change.