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Found 1648 results

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2010
Newton AC, Akar T, Baresel JP, Bebeli PJ, Bettencourt E, Bladenopoulos KV, Czembor JH, Fasoula DA, Katsiotis A, Koutis K et al..  2010.  Cereal landraces for sustainable agriculture. A review (Review). Agronomy for Sustainable Development. 30:237-269.
Pattemore JA, Rice N, Marshall DF, Waugh R, Henry RJ.  2010.  Cereal variety identification using MALDI-TOF mass spectrometry SNP genotyping. Journal of Cereal Science. 52:356-361.
Mascia T, Cillo F, Fanelli V, Finetti-Sialer MM, De Stradis A, Palukaitis P, Gallitelli D.  2010.  Characterization of the interactions between Cucumber mosaic virus and Potato virus Y in mixed infections in tomato. Molecular Plant-Microbe Interactions. 23:1514-1524.
Gonz I, Mart I, Rakitina DV, Lewsey MG, Atencio FA, Llave C, Kalinina NO, Carr JP, Palukaitis P, Canto T.  2010.  Cucumber mosaic virus 2b protein subcellular targets and interactions: Their significance to RNA silencing suppressor activity. Molecular Plant-Microbe Interactions. 23:294-303.
Phillips D, Nibau C, Ramsay L, Waugh R, Jenkins G.  2010.  Development of a molecular cytogenetic recombination assay for barley. Cytogenetic and Genome Research. 129:154-161.
Dagleish MP, Hamilton S, Gonz L, Eaton SL, Steele PJ, Finlayson J, Sis S, Pang YP, Sales J, Chianini F et al..  2010.  Digestion and transportation of bovine spongiform encephalopathy-derived prion protein in the sheep intestine. Journal of General Virology. 91:3116-3123.
Casa R, Baret F, Buis S, Lopez-Lozano R, Pascucci S, Palombo A, Jones HG.  2010.  Estimation of maize canopy properties from remote sensing by inversion of 1-D and 4-D models. Precision Agriculture. 11:319-334.
Tattersall RJ, Prashar A, Singh KD, Tokarczuk PF, Erichsen JT, Hocking PM, Guggenheim JA.  2010.  Ex vivo magnetic resonance imaging of crystalline lens dimensions in chicken. Molecular Vision. 16:144-153.
Druka A, Potokina E, Luo ZW, Jiang N, Chen XW, Kearsey MJ, Waugh R.  2010.  Expression quantitative trait loci analysis in plants. Plant Biotechnology Journal. 8:10-27.
Porter JR, Challinor A, Ewert F, Falloon P, Fischer T, Gregory PJ, Van Ittersum MK, Olesen JE, Moore KJ, Rosenzweig C et al..  2010.  Food security: focus on agriculture. Science. 328:172-173.
McCallum S, Woodhead M, Hackett CA, Kassim A, Paterson A, Graham J.  2010.  Genetic and environmental effects influencing fruit colour and QTL analysis in raspberry. Theoretical and Applied Genetics. 121:611-627.
Richards S, Gibbs RA, Gerardo NM, Moran N, Nakabachi A, Stern D, Tagu D, Wilson ACC, Muzny D, Kovar C et al..  2010.  Genome sequence of the pea aphid Acyrthosiphon pisum. PLOS Biology. 8:-e1000313.
Yang S, Peng Q, Zhang Q, Zou L, Li Y, Robert C, Pritchard L, Liu H, Hovey R, Wang Q et al..  2010.  Genome-wide identifiction of HrpL-regulated genes in the necrotrophic phytopathogen Dickeya dadantii 3937. PLoS One. 5:-e13472.
Grant OM, Tronina L, Ramalho JC, Besson CK, Lobo-Do-Vale R, Pereira JS, Jones HG, Chaves MM.  2010.  The impact of drought on leaf physiology of Quercus suber L. trees: comparison of an extreme drought event with chronic rainfall reduction. Journal of Experimental Botany. 61:4361-4371.
Bek AS, Sauer J, Thygesen MB, Duus JO, Petersen BO, Thirup S, James EK, Jensen KJ, Stougaard J, Radutoiu S.  2010.  Improved characterisation of nod factors and genetically based variation in LysM receptor domains identify amino acids expendable for nod factor recognition in Lotus spp.. Molecular Plant-Microbe Interactions. 23:58-66.
Helliwell RC, Britton AJ, Gibbs S, Fisher JM, Potts JM.  2010.  Interactive effects of N deposition, land management and weather patterns on soil solution chemistry in a Scottish alpine heath. Ecosystems. 13:696-711.
Mitchell RJ, Hester AJ, Campbell CD, Chapman SJ, Cameron CM, Hewison RL, Potts JM.  2010.  Is vegetation composition or soil chemistry the best predictor of the soil microbe community? Plant and Soil. 333:417-430.
Sanchez SE, Petrillo E, Beckwith EJ, Zhang X, Rugnone ML, Hernando CE, Cuevas JC, Godoy Herz MA, Depetris-Chauvin A, Simpson CG et al..  2010.  A methyl transferase links the circadian clock to the regulation of alternative splicing. Nature. 468:112-116.
Elia M, Swanston JS, Moralejo MA, Casas AM, P AM, Ciudad FJ, Thomas WTB, Smith PL, Ullrich SE, Molina-Cano J-L.  2010.  A model of the genetic differences in malting quality between European and North American barley cultivars based on a QTL study of the cross Triumph x Morex. Plant Breeding. 129:280-290.
Preedy K, Schofield PG, Liu S, Matzavinos A, Chaplain MAJ, Hubbard SF.  2010.  Modelling contact spread of infection in host-parasitoid systems: Vertical transmission of pathogens can cause chaos. Journal of Theoretical Biology. 262:441-451.
Mostowfizadeh-Ghalamfarsa R, Panabi F, Banihashemi Z, Cooke DEL.  2010.  Phylogenetic relationship of Phytophthora cryptogea Pethybr. & Laff and P. drechsleri Tucker. Fungal Biology. 114:325-339.
Kim S-H, Spensley M, Choi SK, Calixto CPG, Pendle AF, Koroleva O, Shaw PJ, Brown JWS.  2010.  Plant U13 orthologues and orphan snoRNAs identified by RNomics of RNA from Arabidopsis nucleoli. Nucleic Acids Research. 38:3054-3067.
Gill CIR, McDougall GJ, Glidewell SM, Stewart D, Shen Q, Tuohy K, Dobbin A, Boyd A, Brown E, Haldar S et al..  2010.  Profiling of phenols in human faecal water after raspberry supplementation. Journal of Agricultural and Food Chemistry. 58:10389-10395.
Johnson SN, Petitjean S, Clark KE, Mitchell C.  2010.  Protected raspberry production accelerates onset of oviposition by vine weevils (Otiorhynchus sulcatus). Agricultural and Forest Entomology. 12:277-283.
Lees AK, Brierley JL, Stewart JA, Hilton AJ, Wale SJ, Gladders P, Bradshaw NJ, Peters JC.  2010.  Relative importance of seed-tuber and soilborne inoculum in causing black dot disease of potato. Plant Pathology. 59:693-702.
Paroli R, Spezia L.  2010.  Reversible jump markov chain Monte Carlo methods and segmentation algorithms in hidden Markov models. Australian & New Zealand Journal of Statistics. 52:151-166.
Kylli P, Nohynek L, Puupponen-Pimia R, Westerlund-Wikstrom B, McDougall GJ, Stewart D, Heinonen M.  2010.  Rowanberry phenolics: compositional analysis and bioactivites. Journal of Agricultural and Food Chemistry. 58:11985-11992.
K A, Kuiper HA, Marvin HJP, Boon PE, Busk L, Cnudde FC, Cope S, Davies HV, Dreyer M, Frewer LJ et al..  2010.  The SAFE FOODS framework for improved risk analysis of foods. Food Control. 21:1566-1587.
Montero-Serrano JC, Palarea-Albaladejo J, Martin-Fern JA, Mart M, Guti JV.  2010.  Sedimentary chemofacies characterization by means of multivariate analysis. Sedimentary Geology. 228:218-228.
Carr JP, Lewsey MG, Palukaitis P.  2010.  Signaling in induced resistance. Advances in Virus Research. 76:57-121.
Praveen S, Ramesh SV, Mishra AK, Koundal V, Palukaitis P.  2010.  Silencing potential of viral-derived RNAi constructs in Tomato leaf curl virus-AC4 gene suppression in tomato. Transgenic Research. 19:45-55.
Pickles BJ, Genney DR, Potts JM, Lennon JJ, Anderson IC, Alexander IJ.  2010.  Spatial and temporal ecology of Scots pine ectomycorrhizas. New Phytologist. 186:755-768.
Rustenholz C, Hedley PE, Morris J, Choulet F, Feuillet C, Waugh R, Paux E.  2010.  Specific patterns of gene space organisation revealed in wheat by using the combination of barley and wheat genomic resources. BMC Genomics. 11:-714.
Hodgson JG, Sharafi M, Jalili A, Diaz S, Montserrat-Marti G, Palmer C, Cerabolini B, Pierce S, Hamzehee B, Asri Y et al..  2010.  Stomatal vs. genome size in angiosperms: The somatic tail wagging the genomic dog? Annals of Botany. 105:573-584.
Lewsey MG, Gonz I, Kalinina NO, Palukaitis P, Canto T, Carr JP.  2010.  Symptom induction and RNA silencing suppression by the cucumber mosaic virus 2b protein. Plant Signaling & Behaviour. 5:705-708.
Joshi MV, Mann SG, Antelmann H, Widdick DA, Fyans JK, Chandra G, Hutchings MI, Toth IK, Hecker M, Loria R et al..  2010.  The twin arginine protein transport pathway exports multiple virulence proteins in the plant pathogen Streptomyces scabies. Molecular Microbiology. 77:252-271.
Shepherd LVT, Bradshaw JE, Dale MFB, McNicol JW, Pont SDA, Mottram DS, Davies HV.  2010.  Variation in acrylamide producing potential in potato: Segregation of the trait in a breeding population. Food Chemistry. 123:568-573.
Pearce ISK, Britton AJ, Armitage HF, Jones B.  2010.  Additive impacts of nitrogen deposition and grazing on a mountain moss-sedge heath. Botanica Helvetica.. 120(2):129-137.
Reyers B, Pettorelli N, Katzner T, Gompper ME, Redpath S, Garner TWJ, Altwegg R, Reed DH, Gordon IJ.  2010.  Animal conservation and ecosystem services: garnering the support of mightier forces. Animal Conservation. 13(6):523-525.
Lennon JJ, Beale CM, Reid CL, Kent M, Pakeman RJ.  2010.  Are richness patterns of common and rare species equally well explained by environmental variables? Ecography. 34(4):529-539.
Andrist Rangel Y, Hillier S, Oborn I, Lilly A, Towers W, Edwards AC, Paterson E.  2010.  Assessing potassium reserves in northern temperate grassland soils: A perspective based on quantitative mineralogical analysis and aqua-regia extractable potassium. Geoderma. 158(3-4):303-314.
Clark JM, Gallego-Sala AV, Allott TEH, Chapman SJ, Farewell T, Freeman C, House JI, Orr HG, Prentice IC, Smith P.  2010.  Assessing the vulnerability of blanket peat to climate change using an ensemble of statistical bioclimatic envelope models. Climate Research. 45:131-150.
Gallego-Sala AV, Clark JM, House JI, Orr HG, Prentice IC, Smith P, Farewell T, Chapman SJ.  2010.  Bioclimatic envelope model of climate change impacts on blanket peatland distribution in Great Britain. Climate Research. 45:151-162.
Maderova L, Dawson JJC, Paton GI.  2010.  Cu and Ni mobility and bioavailability in sequentially conditioned soils. Water, Air and Soil Pollution. 210(1-4):63-73.
Baker KL, Marshall S, Nicol GW, Campbell CD, Nicollier G, Ricketts D, Killham K, Prosser JI.  2010.  Degradation of metalaxyl M in contrasting soils is influenced more by differences in physicochemical characteristics than in microbial community composition after reinoculation of sterilised soils. Soil Biology and Biochemistry.. 42(7):1123-1131.
MacLeod M, Moran D, Eory V, Rees RM, Barnes A, Topp CFE, Ball B, Hoad S, Wall E, McVittie A et al..  2010.  Developing greenhouse gas marginal abatement cost curves for agricultural emissions from crops and soils in the UK. Agricultural Systems. 103(4):198-209.
Patton V, Ewald J, Smith AA, Newey SJ, Iason GR, Thirgood SJ, Raynor R.  2010.  Distribution of mountain hares (Lepus timidus) in Scotland: results from a questionnaire. Mammal Review. 40(4):313-326.
Rhind SM, Evans NP, Bellingham M, Sharpe RM, Cotinot C, Mandon-Pepin B, Loup B, Sinclair KD, Lea RG, Pocar P et al..  2010.  Effects of environmental pollutants on the reproduction and welfare of ruminants. Animal. 4(7):1227-1239.
Silvertown J, Tallowin J, Stevens C, Power SA, Morgan V, Emmett B, Hester AJ, Grime P, Morecroft M, Buxton R et al..  2010.  Environmental myopia: a diagnosis and a remedy. Trends in Ecology and Evolution. 25(10):556-561.
Day-Stirrat RJ, Dutton S, Milliken KL, Loucks RG, Aplin AC, Hillier S, van der Pluijm BA.  2010.  Fabric anisotropy induced by primary depositional variations in the silt: clay ratio in two fine-grained slope fan complexes: Texas Gulf Coast and Northern North Sea. Sedimentary Geology. 226(1-4):42-53.
Pakeman RJ, Marriott CA.  2010.  A functional assessment of the response of grassland vegetation to reduced grazing and abandonment. Journal of Vegetation Science.. 21(4):683-694.
Reed MS, Bonn A, Slee W, Beharry-Borg N, Birch J, Brown I, Burt TP, Chapman D, Chapman PJ, Clay G et al..  2010.  The future of the uplands. Land Use Policy.. Suppl.1:S204-S216.
Kutalek R, Wewalkab G, Gundacker C, Auere H, Wilson MJ, Haluzag D, Huhulescu S, Hillier S, Sagerh M, Prinz A.  2010.  Geophagy and potential health implications: geohelminths, microbes and heavy metals. Transactions of the Royal Society of Tropical Medicine and Hygiene. 104(12):787-795.
Clements MN, Clutton-Brock TH, Albon SD, Pemberton LKJMEB.  2010.  Getting the timing right: antler growth phenology and sexual selection in a wild red deer population. Oecologia. 164:357-368.
McDonnell JJ, McGuire K, Aggarwal KP, Beven K, Biondi D, Destouni G, Dunn S, James A, Kirchner J, Kraft P et al..  2010.  How old is the streamwater? Open questions in catchment transit time conceptualization, modelling and analysis Hydrological Processes. 24(12):1745-1754.
Sutherland WJ, Albon SD, Allison H, Armstrong-Brown S, Bailey MJ, Bereton T, Boyd IL, Carey P, Edwards J, Gill M et al..  2010.  The identification of priority opportunities for UK nature conservation policy. Journal of Applied Ecology. 47(5):955-965.
Marriott CA, Fisher JM, Hood K, Pakeman RJ.  2010.  Impacts of extensive grazing and abandonment on grassland soils and productivity. Agriculture, Ecosystems and Environment. 139:476-482.
Shaw RA, Elston DA, Pakeman RJ, Young MR, Iason GR.  2010.  The impacts of pollination, plant characteristics and local density on the reproductive success of a scarce plant species, Salix arbuscula. Plant Ecology. 211:367-377.
Sayan Y, Ozkul H, Polat M, Capci T, Orskov ER.  2010.  In situ degradation characteristics as predictors of in vivo digestibility and metabolizable energy values of forages and wheat straw. Journal of Applied Animal Research. 37(1):77-81.
Walker DM, Carmeli C, Perez-Barberia FJ, Small M, Perez-Fernandez E.  2010.  Inferring networks from multivariate symbolic time series to unravel behavioural interactions among animals. Animal Behaviour. 79(2):351-359.
Sebert SP, Hyatt MA, Chan LLY, Yiallourides M, Fainberg HP, Patel N, Sharkey D, Stephenson T, Rhind SM, Bell RC et al..  2010.  Influence of prenatal nutrition and obesity on tissue specific fat mass and obesity-associated (FTO) gene expression. Reproduction. 139(1):265-274.
Pilgrim ES, Macleod CJA, Blackwell MSA, Bol R, Hogan DV, Chadwick DR, Cardenas L, Misselbrook TH, Haygarth PM, Brazier RE et al..  2010.  Interactions among agricultural production and other ecosystem services delivered from European temperate grassland systems. Advances in Agronomy. 109:117-154.
Helliwell RC, Britton AJ, Gibbs S, Fisher JM, Potts JM.  2010.  Interactive effects of nitrogen deposition, land management and weather on soil solution chemistry in a Scottish low-alpine heath. Ecosystems. 13(5):696-711.
Mitchell RJ, Hester AJ, Campbell CD, Chapman SJ, Cameron CM, Hewison RL, Potts JM.  2010.  Is vegetation composition or soil chemistry the best predictor of the soil microbial community? Plant and Soil. 333(1-2):417-430.
Pillot MH, Gautrais J, Gouello J, Michelena P, Sibbald AM, Bon R.  2010.  Moving together: Incidental leaders and naive followers. Behavioural Processes. 83(3):225-241.
Stockan JA, Rao S, Pakeman RJ.  2010.  Nesting preferences of the threatened wood ant Formica exsecta (Hymenoptera: Formicidae): implications for conservation in Scotland. Journal of Insect Conservation.. 14(3):269-276.
Alcon F, Pedrero F, Martin-Ortega J, Arcas N, Alarcon JJ, de M.  2010.  The non-market value of reclaimed waste water for use in agriculture: a contingent valuation approach. Spanish Journal of Agricultural Research. 8(S2):187-196.
Grimm V, Berger U, DeAngelis DL, Polhill JG, Giske J, Railsback SF.  2010.  The ODD protocol for describing individual-based and agent-based models: A first update. Ecological Modelling. 221(23):2760-2768.
Polhill JG.  2010.  ODD updated. Journal of Artificial Societies and Social Simulation.. 13(4):9.
Andersen R, Rochefort L, Poulin M.  2010.  Peat, water and plant tissue chemistry monitoring: A seven-year case-study in a restored peatland. Wetlands. 30(1):159-170.
Senn HV, Swanson GM, Goodman SJ, Barton NH, Pemberton JM.  2010.  Phenotypic correlates of hybridisation between red and sika deer (genus Cervus). Journal of Animal Ecology. 79(2):414-425.
Beechie TJ, Sear DA, Olden JD, Pess GR, Buffington JM, Moir HJ, Roni P, Pollock MM.  2010.  Process-based principles for restoring river ecosystems. BioScience. 60(3):209-222.
Shaw RF, Iason GR, Pakeman RJ, Young MR.  2010.  Regeneration of Salix arbuscula and Salix lapponum within a large mammal exclosure: the impacts of microsite and herbivory. Restoration Ecology. 18(Suppl. 1):1-9.
Rousidou C, Papadopoulou K, Zervakis G, Singh BK, Ehaliotis C, Karpouzas DG.  2010.  Repeated application of diluted olive mill wastewater induces changes in the structure of the soil microbial community. European Journal of Soil Biology. 46(1):34-40.
Sawyer AM, Pasternack GB, Moir HJ, Fulton AA.  2010.  Riffle-pool maintenance and flow convergence routing confirmed on a large gravel bed river. Geomorphology. 114(3):143-160.
Perez-Barberia FJ, Yearsley JM.  2010.  Sexual selection for fighting skills as a driver of sexual segregation in polygynous ungulates: an evolutionary model. Animal Behaviour. 80(4):745-755.
Castellazzi MS, Matthews J, Angevin F, Wood GA, Burgess PJ, Brown I, Conrad KF, Perry PN.  2010.  Simulation scenarios of spatio-temporal arrangement of crops at the landscape scale. Environmental Modelling and Software. 25(12):1881-1889.
Gotts NM, Polhill JG.  2010.  Size matters: large-scale replications of experiments with FEARLUS. Advances in Complex Systems. 13(4):453-467.
Poggio L, Gimona A, Brown I, Castellazzi MS.  2010.  Soil available water capacity interpolation and spatial uncertainty modelling at multiple geographical extents. Geoderma. 160(2):175-188.
Pickles BJ, Genney DR, Potts JM, Lennon JJ, Anderson IC, Alexander IJ.  2010.  Spatial and temporal ecology of Scots pine ectomycorrhizas. New Phytologist. 186(3):755-768.
Nijnik M, Nijnik, M.; Mather A, Lundin L, Staszewski T, Postolache C.  2010.  Stakeholder attitudes to multi-functional forests in Europe. Forests, Trees and Livelihoods. 19(4):341-358.
Moir HJ, Pasternack GB.  2010.  Substrate requirements of spawning Chinook salmon (Oncorhynchus tshawytscha) are dependent on local channel hydraulics. River Research and Applications. 26(4):456-468.
Alexandrov GA, Ames D, Aumann C, Bellocchi G, Bruen M, Crout N, Erechtchoukova M, Hildebrandt A, Hoffman F, Jackisch C et al..  2010.  Technical assessment and evaluation of environmental models and software: Letter to the Editor. Environmental Modelling and Software. 26(3):328-336.
Phillip S, Hunter C, Blackstock KL.  2010.  A typology for defining agritourism. Tourism Management. 31(6):754-758.
Abarenkov K, Nilsson RH, Larsson KH, Alexander IJ, Eberhardt U, Erland S, Hoiland K, Kjoller R, Larsson E, Pennanen T et al..  2010.  The UNITE database for molecular identification of fungi - recent updates and future perspectives. New Phytologist. 186(2):281-285.
Polhill JG, Sutherland LA, Gotts NM.  2010.  Using qualitative evidence to enhance an agent-based modelling system for studying land use change. Journal of Artificial Societies and Social Simulation.. 13(2)
White JQ, Moir HJ, Pasternack GB.  2010.  Valley width controls on riffle location and persistence on a gravel bed river. Geomorphology. 121(3-4):206-221.
Perez-Espona S, Perez-Barberia FJ, Jiggins CJ, Gordon IJ, Pemberton J.  2010.  Variable extent of sex-biased dispersal in a strongly polygynous mammal. Molecular Ecology. 19(15):3101-3113.
2009
Kim S-H, Koroleva OA, Lewandowska D, Pendle AF, Clark GP, Simpson CG, Shaw PJ, Brown JWS.  2009.  Aberrant mRNA transcripts and the nonsense-mediated decay proteins UPF2 and UPF3 are enriched in the Arabidopsis nucleolus. Plant Cell. 21:2045-2057.
Antunez-Lamas M, Cabrera E, Lopez-Solanilla E, Solano R, Gonzalez-Melendi P, Chico JM, Toth IK, Birch PRJ, Pritchard L, Liu H et al..  2009.  Bacterial chemoattraction towards jasmonate plays a role in the entry of Dickeya dadantii through wounded tissues. Molecular Microbiology. 74:662-671.
Peter KA, Gildow FE, Palukaitis P, Gray SM.  2009.  The C-terminus of the Polerovirus P5 readthrough domain limits virus infection to the phloem. Journal of Virology. 83:5419-5429. Abstract
Adam MAM, Phillips MS, Tzortzakakis M, Blok VC.  2009.  Characterisation of mjap genes encoding novel secreted proteins from the root-knot nematode, Meloidogyne javanica. Nematology. 11:253-265.
Prashar A, Hocking PM, Erichsen JT, Fan Q, Saw S-M, Guggenheim JA.  2009.  Common determinants of body size and eye size in chickens from an advanced intercross line. Experimental Eye Research. 89:42-48.
Cockell CS, L A, Fridlund M, Herbst TM, Kaltenegger L, Absil O, Beichman C, Benz W, Blanc M, Brack A et al..  2009.  Darwin - a mission to detect and search for life on extrasolar planets. Astrobiology. 9:1-22.
Koroleva OA, Calder G, Pendle AF, Kim S-H, Lewandowska D, Simpson CG, Jones IM, Brown JWS, Shaw PJ.  2009.  Dynamic behaviour of Arabidopsis eIF4A-III, putative core protein of exon junction complex: fast relocation to nucleolus and splicing speckles under hypoxia. Plant Cell. 21:1592-1606.
Pawlett M, Hopkins DW, Moffett BF, Harris JA.  2009.  The effect of earthworms and liming on soil microbial communities. Biology and Fertility of Soils. 45:361-369. Abstract
Kassim A, Poette J, Paterson A, Zait D, McCallum S, Woodhead M, Smith K, Hackett CA, Graham J.  2009.  Environmental and seasonal influences on red raspberry anthocyanin antioxidant contents and identification of quantitative traits loci (QTL). Molecular Nutrition and Food Research. 53:625-634. Abstract
Lokossou AA, Park TH, van Arkel G, Arens M, Ruyter-Spira C, Morales J, Whisson SC, Birch PRJ, Visser RGF, Jacobsen E et al..  2009.  Exploiting knowledge of R/Avr genes to rapidly clone a new LZ-NBS-LRR family of late blight resistance genes from potato linkage group IV. Molecular Plant-Microbe Interactions. 22:630-641.
Haas BJ, Kamoun S, Zody MC, Jiang RHY, Handsaker RE, Cano LM, Grabherr M, Kodira CD, Raffaele S, Torto-Alalibo T et al..  2009.  Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans. Nature. 461:393-398.
Rehman S, Butterbach P, Popeijus H, Overmars H, Davis EL, Jones JT, Goverse A, Bakker J, Smant G.  2009.  Identification and characterization of the most abundant cellulases in stylet secretions from Globodera rostochiensis. Phytopathology. 99:194-202.
Jones JT, Kumar A, Pylypenko LA, Thirugnanasambandam A, Castelli L, Chapman S, Cock PJA, Grenier E, Lilley CJ, Phillips MS et al..  2009.  Identification and functional characterisation of effectors in expressed sequence tags from various life cycle stages of the potato cyst nematode Globodera pallida. Molecular Plant Pathology. 10:815-828.
Rakhshanderhoo F, Takeshita M, Squires J, Palukaitis P.  2009.  The influence of RNA-dependent RNA polymerase 1 on Potato virus Y infection and on other antiviral response genes. Molecular Plant-Microbe Interactions. 22:1312-1318.
Braga RA, Dupuy L, Pasqual M, Cardoso RR.  2009.  Live biospeckle laser imaging of root tissues. European Biophysics Journal. 38:679-686. Abstract
Baggaley NJ, Langan SJ, Futter MN, Potts JM, Dunn SM.  2009.  Long-term trends in hydro-climatology of a major Scottish mountain river. Science of the Total Environment. 407:4633-4641.
Pritchard L, Liu H, Booth C, Douglas E, Fran P, Schrenzel J, Hedley PE, Birch PRJ, Toth IK.  2009.  Microarray comparative genomic hybridisation analysis incorporating genomic organisation, and application to enterobacterial plant pathogens. PLoS Computational Biology. 5:-e1000473.
Vinten AJA, Potts JM, Avery L, Strachan NJC.  2009.  Microbial pollution of water by livestock: approaches to risk assessment and mitigation. Animal. 3:744-752.
Cummings SP, Gyaneshwar P, Vinuesa P, Farruggia FT, Andrews M, Humphry D, Elliott GN, Nelson A, Orr C, Pettitt D et al..  2009.  Nodulation of Sesbania species by Rhizobium (Agrobacterium) strain IRBG74 and other Rhizobia. Environmental Microbiology. 11:2510-2525.
Comadran J, Thomas WTB, van Eeuwijk FA, Ceccarelli S, Grando S, Stanca AM, Pecchioni N, Akar T, Al-Yassin A, Benbelkacem A et al..  2009.  Patterns of genetic diversity and linkage disequilibrium in a highly structured Hordeum vulgare association-mapping population for the Mediterranean basin. Theoretical and Applied Genetics. 119:175-187.
Agu RC, Swanston JS, Walker JW, Pearson SY, Bringhurst TA, Brosnan JM, Jack FR.  2009.  Predicting alcohol yield from UK soft winter wheat for grain distilling: combined influence of hardness and nitrogen measurements. Journal of the Institute of Brewing. 115:183-190.
Wang MH, Hu XH, Li G, Leach LJ, Potokina E, Druka A, Waugh R, Kearsey MJ, Luo ZW.  2009.  Robust detection and genotyping of single feature polymorphisms from gene expression data. PLoS Computational Biology. 5:-e1000317.
Lewsey M, Surette M, Robertson FC, Ziebell H, Choi SH, Ryu KH, Canto T, Palukaitis P, Payne T, Walsh JA et al..  2009.  The role of the Cucumber mosaic virus 2b protein in viral movement and symptom induction. Molecular Plant-Microbe Interactions. 22:642-654. Abstract
Maestre FT, Bowker M, Puche MD, Bowker M, Hinojosa MB, Mart I, Garc P, Castillo AP, Soliveres S, Luzuriaga AL et al..  2009.  Shrub encroachment can reverse desertification in semi-arid Mediterranean grasslands. Ecology Letters. 12:930-941. Abstract
McKenzie BM, K S, MacKenzie K, Peth S, Horn R.  2009.  Soil compaction by uniaxial loading and the survival of the earthworm Aporrectodea caliginosa. Soil and Tillage Research. 104:320-323.
Hopkins DW, Waite IS, McNicol JW, Poulton PR, MacDonald AJ, O'Donnell AG.  2009.  Soil organic carbon contents in long-term experimental grassland plots in the UK (Palace Leas and Park Grass) have not changed consistently in recent decades. Global Change Biology. 15:1739-1754. Abstract
Polechov J, Barton N, Marion G.  2009.  Species' range: adaptation in space and time. American Naturalist. 174:E186-E204.
Shi B-J, Symons RH, Palukaitis P.  2009.  Stability and competitiveness of interviral recombinant RNAs derived from a chimeric cucumovirus. Virus Research. 140:216-221. Abstract
Neumann G, George TS, Plassard C.  2009.  Strategies and methods for studying the rhizosphere - the plant science toolbox. Plant and SoilPlant and Soil. 321:431-456.
Mess A, Squire GR, Perry JN, Angevin F, Gomez M, Townend P, Sausse C, Breckling B, Langrell S, Dzeroski S et al..  2009.  Sustainable introduction of GM crops into European agriculture: a summary report of the FP6 SIGMEA research project. Ol. 16:37-51.
Pearce MC, Chase-Topping ME, McKendrick IJ, Mellor DJ, Locking ME, Allison L, Ternent HE, Matthews L, Knight HI, Smith AW et al..  2009.  Temporal and spatial patterns of bovine Escherichia coli O157 prevalence and comparison of temporal changes in the patterns of phage types associated with bovine shedding and human E. coli O157 cases in Scotland between 1998-2000 and 2002-2004. BMC Microbiology. 9:-276.
Jones HG, Serraj R, Loveys BR, Xiong LH, Wheaton A, Price AH.  2009.  Thermal infrared imaging of crop canopies for the remote diagnosis and quantification of plant responses to water stress in the field.. Functional Plant Biology. 36:978-989.
Goodall N, Kisiswa L, Prashar A, Faulkner S, Tokarczuk P, Singh K, Erichsen JT, Guggenheim J, Halfter W, Wride MA.  2009.  Three-dimensional modelling of chick embryo eye development and growth using high resolution magnetic resonance imaging. Experimental Eye Research. 89:511-521.
Birch PRJ, Armstrong MR, Bos J, Boevink P, Gilroy EM, Taylor RM, Wawra S, Pritchard L, Conti L, Ewan R et al..  2009.  Towards understanding the virulence functions of RXLR effectors of the oomycete plant pathogen Phytophthora infestans (Review). Journal of Experimental Botany. 60:1133-1140.
Potokina E, Druka A, Kearsey MJ.  2009.  Transcript profiling and expression level mapping. Methods in Molecular Biology. 513:81-92.
Potokina E, Druka A, Luo ZW, Waugh R, Kearsey MJ.  2009.  The transcriptome analysis of barley (Hordeum vulgare L.) using the Affymetrix Barley1 GeneChip. Russian Journal of Genetics. 45:1317-1328.
Crosley LK, Duthie SJ, Polley AC, Bouwman FG, Heim C, Mulholland F, Horgan GW, Johnson IT, Mariman EC, Elliott RM et al..  2009.  Variation in protein levels obtained from human blood cells and biofluids for platelet, peripheral blood mononuclear cell, plasma, urine and saliva proteomics. Genes and Nutrition. 4:95-102.
Geberts J, Singh BK, Pan Y, Bodrossy L.  2009.  Activity and structure of methanotrophic communities in landfill cover soils. Environmental Microbiology and Environmental Microbiology Reports. 1:414-423.
Potts JM, Chapman SJ, Towers W, on values Campbell C 'BCD, change in thesoil, implications for monitoring' by R.M. Lark BPH, of Science KEJSGJD.  2009.  Comments on 'Baseline values and change in the soil, and implications for monitoring' by R.M. Lark, P.H. Bellamy and G.J.D. Kirk. European Journal of Soil Science. 60:481-483.
Paterson E.  2009.  Comments on the Regulatory Gate Hypothesis and implications for C-cycling in soil. Soil Biology and Biochemistry. 41(6):1352-1354.
Pearce-Higgins JW, Yalden DW, Dougall TW, Beale CM.  2009.  Does climate change explain the decline of a trans-Saharan Afro-Palaearctic migrant? Oecologia. 159(3):649-659.
Brooker RW, Callaway RM, Cavieres L, Kikvidze Z, Lortie CJ, Michalet R, Pugnaire FI, Valiente-Banuet A, Whitham TG.  2009.  Don't diss integration: A comment on Ricklef's disintegrating communities. American Naturalist.. 174(6):919-927.
Edwards P, Farrington J, Mellish C, Philip L, Chorley AH, Hielkema F, Pignotti E, Reid R, Polhill JG, Gotts NM.  2009.  e-Social science and evidence-based policy assessment: challenges and solutions. Social Science Computer Review. 27(4):553-568.
Karpouzas DG, Rousidou C, Papadopoulou KK, Bekris F, Zervakis G, Singh BK, Ehaliotis C.  2009.  Effect of continuous olive mill wastewater applications, in the presence and absence of N fertilization, on the structure of the soil fungal communiies. FEMS Microbiology Ecology. 70(3):388-401.
Watts EJ, Palmer SCF, Bowman AS, Irvine RJ, Smith A, Travis JMJ.  2009.  The effect of host movement on viral transmission dynamics in a vector-borne disease system. Parasitology. 136(10):1221-1234.
Mitchell RJ, Rose RJ, Palmer SCF.  2009.  The effect of restoration techniques on non-target species: case studies in moorland systems. Applied Vegetation Science. 12(1):81-91.
Baker KL, Langenheder S, Nicol GW, Ricketts D, Killham K, Campbell CD, Prosser JI.  2009.  Environmental and spatial characterisation of bacterial community composition in soil to inform sampling strategies. Soil Biology and Biochemistry. 41(11):2292-2298.
Stott AW, Vousough-Ahmadi B, Morgan-Davies C, Dwyer C, Goddard PJ, Phillips K, Milne CE, Kupiec B, Ringrose S, Waterhouse A.  2009.  Evaluating extensive sheep farming systems. Aspects of Applied Biology, 93, 161-166. Proceedings of the Integrated Agricultural Systems: Methodologies, Modelling and Measurement Conference, Edinburgh, UK, 2-4, June 2009.. 93:161-166.
Illian JB, Prosser JI, Baker KL, Rangel-Castro JI.  2009.  Functional principal component data analysis: A new method for analysing microbial community fingerprints. Journal of Microbiological Methods. 79(1):89-95.
Perez-Espona S, Perez-Barberia FJ, Goodall-Copestake WP, Jiggins CD, Gordon IJ, Pemberton JM.  2009.  Genetic diversity and population structure of Scottish Highland red deer (Cervus elaphus) populations: a mitochondrial survey. Heredity. 102(2):199-210.
Poggio L, Vrscaj B.  2009.  A GIS-based human health risk assessment for urban green space planning -- An example from Grugliasco (Italy). The Science of the Total Environment. 407(23):5961-5970.
Marubini F, Gimona A, Evans PGH, Wright PJ, Pierce GJ.  2009.  Habitat preferences and interannual variability in occurrence of the harbour porpoise Phocoena phocoena off north-west Scotland (UK). Marine Ecology Progress Series. 381:297-310.
Nicol L, Bishop SC, Pong-Wong R, Bendixen C, Holm LE, Rhind SM, McNeilly AS.  2009.  Homozygosity for a single base-pair mutation in the oocytespecific GDF9 gene results in sterility in Thoka sheep. Reproduction. 138:921-933.
Morgan-Davies C, Waterhouse A, Dwyer C, Goddard P, Phillips K, Milne C, Kupiec B, Ringrose S, Stott AW.  2009.  Identification of strategic drivers for extensive hill sheep farms post CAP reform. Proceedings of the Integrated Agricultural Systems: Methodologies, Modelling and Measurements Conference, Edinburgh, UK. 2-4 June 2009. Aspects of Applied Biology, 93, 187-192.. 93:187-192.
Vandenberge C, Prior G, Littlewood NA, Brooker RW, Pakeman RJ.  2009.  Influence of livestock grazing on meadow pipit foraging behaviour in upland grassland. Basic and Applied Ecology. 10:662-670.
Pedersen ML, Friberg N.  2009.  Influence of physical disturbance on habitats and biological communities in lowland streams. Fundamental and Applied Limnology. 174(1):27-41.
Creamer RE, Bellamy P, Black HIJ, Cameron CCCD, Chamberlain P, Harris J, Parekh N, Pawlett M, Poskitt J, Stone D et al..  2009.  An inter-laboratory comparison of multi-enzyme and multiple substrate-induced respiration assays to assess method repeatability in soil monitoring. Biology and Fertility of Soils. 45(6):623-633.
Phillip S, Dandy N, Gill R, MacMillan DC.  2009.  Is legislation a barrier to the sustainable management of game species? A case study of wild deer in Britain Journal of Environmental Planning and Management. 52(8):993-1012.
Pakeman RJ, Pugnaire F, Michalet R, Lortie C, Schiffers K, Maestre F, Travis J.  2009.  Is the cask of facilitation ready for bottling? A symposium on the connectivity and future directions of positive plant interactions Biology Letters. 5(5):577-579.
Littlewood NA, Pakeman RJ, Woodin SJ.  2009.  Isolation of habitat patches limits colonisation by moorland Hemiptera. Journal of Insect Conservation. 13:29-36.
Fortunel C, Garnier E, Joffre R, Kazakou E, Quested H, Grigulis K, Lavorel S, Ansquer P, Castro H, Cruz P et al..  2009.  Leaf traits capture the effects of land use changes and climate on litter decomposability of grasslands across Europe. Ecology. 90(3):598-611.
Marriott CA, Hood K, Fisher JM, Pakeman RJ.  2009.  Long-term impacts of extensive grazing and abandonment on the species composition, richness, diversity and productivity of agricultural grassland. Agriculture, Ecosystems and Environment.. 134:190-200.
Baggaley NJ, Langan SJ, Futter MN, Potts JM.  2009.  Long-term trends in hydroclimatology of a Scottish mountain river. The Science of the Total Environment. 407(16):4633-4641.
Vinten AJA, Avery LM, Potts JM, Strachan N.  2009.  Microbial pollution of water by livestock: approaches to risk assessment and mitigation. Animal. 3(5):744-752.
Simpson SJ, Raubenheimer D, Charleston MA, Clissold FJ, Couzin ID, Kendall D, Clements KD, Ross A, Coleman RA, Dussutour A et al..  2009.  Modelling nutritional interactions: from individuals to communities. Trends in Ecology and Evolution.. 25(1):53-60.
Cummings SP, Gyaneshwar P, Vinuesa P, Farruggia FT, Andrews M, Humphry D, Elliott GN, Nelson A, Orr C, Pettitt D et al..  2009.  Nodulation of Sesbania species by Rhizobium (Agrobacterium) strain IRBG74 and other rhizobia. Environmental Microbiology. 11(10):2510-2525.
Polhill JG, Gotts NM.  2009.  Ontologies for transparent integrated human-natural system modelling. Landscape Ecology. 24(9):1255-1267.
Pettorelli N, Katzner T, Gordon IJ, Garner T, Mock K, Redpath S, Gompper M.  2009.  Possible consequences of the Copenhagen climate change meeting for conservation of animals. Animal Conservation. 12(6):503-504.
Pakeman RJ, Small JL.  2009.  Potential and realised contribution of endozoochory to seedling establishments. Basic and Applied Ecology. 10(7):656-661.
Grelet GA, Johnson D, Paterson E, Anderson IC, Alexander IJ.  2009.  Reciprocal carbon and nitrogen transfer between an ericaceous dwarf shrub and fungi isolated from Piceirhiza bicolorata ectomycorrhizas. New Phytologist. 182(2):359-366.
Pakeman RJ, Leps J, Kleyer M, Lavorel S, Garnier E, consortium V.  2009.  Relative climatic, edaphic and management controls of plant functional trait signatures. Journal of Vegetation Science. 20(1):148-159.
Pakeman RJ, Nolan AJ.  2009.  Setting sustainable grazing levels for heather moorland: a multi-site analysis. Journal of Applied Ecology. 46(2):363-368.
Robinson CH, Szaro TM, Izzo AD, Anderson IC, Parkin PI, Bruns TD.  2009.  Spatial distribution of fungal communities in a coastal grassland soil. Soil Biology and Biochemistry. 41(2):414-416.
Paterson E, Midwood AJ, Millard P.  2009.  Through the eye of the needle: A review of isotope approaches to quantify processes mediating soil carbon balance. New Phytologist. 184:19-33.
Gotts NM, Polhill JG.  2009.  When and how to imitate your neighbours: lessons from and for FEARLUS. Journal of Artificial Societies and Social Simulation. 12(3):2.
2008
Langkilde S, Schroder M, Stewart D, Meyer O, Conner S, Davies HV, Poulsen M.  2008.  Acute toxicity of high doses of the glycoalkaloids, . Journal of Agricultural and Food Chemistry. 56:8753-8760. Abstract
Hancock RD, Chudek S, Walker PG, Pont SDA, Viola R.  2008.  Ascorbic acid conjugates isolated from the phloem of Cucurbitaceae. Phytochemistry. 69:1850-1858. Abstract
Pswarayi A, van Eeuwijk FA, Ceccarelli S, Grando S, Comadran J, Russell JR, Francia E, Pecchioni N, Li Destri O, Akar T et al..  2008.  Barley adaptation and improvement in the Mediterranean basin. Plant Breeding. 127:554-560.
Pswarayi A, van Eeuwijk FA, Ceccarelli S, Grando S, Comadran J, Russell JR, Pecchioni N, Tondelli A, Akar T, Al-Yassin A et al..  2008.  Changes in allele frequencies in landraces, old and modern barley cultivars of marker loci close to QTL for grain yield under high and low input conditions. Euphytica. 163:435-447. Abstract
Peters JC, Lees AK, Cullen DW, Sullivan L, Stroud GP, Cunnington AC.  2008.  Characterisation of Fusarium sp. responsible for causing dry rot of potato in Great Britain. Plant Pathology. 57:262-271. Abstract
Adam MAM, Phillips MS, Jones JT, Blok VC.  2008.  Characterisation of the cellulose binding protein Mj-cbp-1 of the root knot nematode, Meloidogyne javanica. Physiological and Molecular Plant Pathology. 72:21-28. Abstract
Kasprowicz L, Malloch G, Foster S, Pickup J, Zhan J, Fenton B.  2008.  Clonal turnover of MACE-carrying peach-potato aphids (Myzus persicae (Sulzer), Homoptera: Aphididae) colonizing Scotland. Bulletin of Entomological Research. 98:115-124. Abstract
Holden N, Pritchard L, Toth IK.  2008.  Colonisation outwith the colon: plants as an alternative environmental reservoir for human pathogenic enterobacteria. FEMS Microbiology ReviewsFEMS Microbiology Reviews. 33:689-703.
Druka A, Potokina E, Luo ZW, Bonar N, Druka I, Zhang L, Marshall DF, Steffenson BJ, Close TJ, Wise RP et al..  2008.  Exploiting regulatory variation to identify genes underlying quantitative resistance to the wheat stem rust pathogen Puccinia graminis f. sp. tritici in barley. Theoretical and Applied Genetics. 117:261-272. Abstract
Ducreux LJM, Morris WL, Prosser IM, Morris JA, Beale MH, Wright F, Shepherd T, Bryan GJ, Hedley PE, Taylor MA.  2008.  Expression profiling of potato germplasm differentiated in quality traits leads to the identification of candidate flavour and texture genes. Journal of Experimental Botany. 59:4219-4231. Abstract
Artz RRE, Chapman SJ, Robertson AHJ, Potts JM, Laggoun-D F, Gogo S, Comont L, Disnar JR, Francez AJ.  2008.  FTIR spectroscopy can be used as a screening tool for organic matter quality in regenerating cutover peatlands. Soil Biology & Biochemistry. 40:515-527. Abstract
Potokina E, Druka A, Luo ZW, Wise R, Waugh R, Kearsey MJ.  2008.  Gene expression quantitative trait locus analysis of 16,000 barley genes reveals a complex pattern of genome-wide transcriptional regulation. The Plant Journal. 53:90-101. Abstract
Kloosterman B, De Koeyer D, Griffiths R, Flinn B, Steuernagel B, Scholz U, Sonnewald S, Sonnewald U, Bryan GJ, Prat S et al..  2008.  Genes driving potato tuber initiation and growth: identification based on transcriptional changes using the POCI array. Functional & Integrative Genomics. 8:329-340. Abstract
Denoys-Rothan B, Chartier P, Petit A, Gordon S, Graham J, Dolan A, Hofer M, Faedi W, Malteni M, Baruzzi G et al..  2008.  Genetic resource of European small berries according to Genberry. Sodinninkyste ir Darzininkyste. 27:371-377.
Abad P, Gouzy J, Aury JM, Castagnone-Sereno P, Danchin EGJ, Deleury E, Perfus-Barbeoch L, Anthouard V, Artiguenave F, Blok VC et al..  2008.  Genome sequence of the metazoan plant-parasitic nematode Meloidogyne incognita. Nature Biotechnology. 26:909-915.
Hughes V, Bannantine JP, Denham S, Smith S, Garcia-Sanchez A, Sales J, Paustian ML, McLean K, Stevenson K.  2008.  Immunogenicity of proteome-determined Mycobacterium avium subsp paratuberculosis-specific proteins in sheep with Paratuberculosis. Clinical and Vaccine Immunology. 15:1824-1833.
Kroghsbo S, Madsen C, Poulsen M, Schroder M, Kvist PH, Taylor MA, Gatehouse A, Shu Q, Knudsen I.  2008.  Immunotoxicological studies of genetically modified rice expressing PHA-E lectin or Bt toxin in Wistar rats. Toxicology. 245:24-34. Abstract
Comadran J, Russell JR, van Eeuwijk FA, Ceccarelli S, Grando S, Baum M, Stanca AM, Pecchioni N, Mastrangelo AM, Akar T et al..  2008.  Mapping adaptation of barley to droughted environments. Euphytica. 161:35-45. Abstract
Jiang N, Leach LJ, Hu X, Potokina E, Jia T, Druka A, Waugh R, Kearsey MJ, Luo ZW.  2008.  Methods for evaluating gene expression from Affymetrix microarray datasets. BMC Bioinformatics. 9:-284. Abstract
Baccini M, Bachmaier EM, Biggeri A, Boekschoten MV, Bouwman FG, Brennan L, Caesar R, Cinti S, Coort SL, Crosley K et al..  2008.  The NuGO proof of principle study package: a collaborative research effort of the European Nutrigenomics Organisation. Genes and Nutrition. 3:147-151.
Birch PRJ, Boevink P, Gilroy E, Hein I, Pritchard L, Whisson SC.  2008.  Oomycete RXLR effectors: delivery, functional redundancy and durable disease resistance. Current Opinion in Plant Biology. 11:373-379. Abstract
Blok VC, Jones JT, Phillips MS, Trudgill DL.  2008.  Parasitism genes and host range disparities in biotrophic nematodes: the conundrum of polyphagy versus specialism. Bioessays. 30:249-259. Abstract
van Poppel PMJA, Guo J, van de Vondervoort PJI, Jung MWM, Birch PRJ, Whisson SC, Govers F.  2008.  The Phytophthora infestans avirulence gene Avr4 encodes an RXLR-dEER effector. Molecular Plant-Microbe Interactions. 21:1460-1470. Abstract

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The James Hutton Research Institute is the result of the merger in April 2011 of MLURI and SCRI. This merger formed a new powerhouse for research into food, land use, and climate change.