Publications list
Filters: First Letter Of Last Name is P [Clear All Filters]
Combined effects of rhizodeposit C and crop residues on SOM priming, residue mineralization and N supply in soil. Soil Biology and Biochemistry. 113:35-44.
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2017.
Combined drought and heat activates protective responses in Eucalyptus globulus that are not activated when subjected to drought or heat stress alone. Frontiers in Plant Science. 9:ArticleNo.819.
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2018.
Combination of herbivore removal and nitrogen deposition increases upland carbon storage. Global Change Biology.. 21:3036-3048.
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2015.
Colonisation outwith the colon: plants as an alternative environmental reservoir for human pathogenic enterobacteria. FEMS Microbiology ReviewsFEMS Microbiology Reviews. 33:689-703.
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2008.
Colon-available raspberry polyphenols exhibit anti-cancer effects on in vitro models of colon cancer. Journal of Carcinogenesis. 6:1-13. Abstract
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2007.
Colon-available raspberry extract exhibit anti-cancer effects on in vitro models of colon cancer. Proceedings of the Nutrition Society. 66:67A-67A.
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2007.
Collection and evaluation of genetic diversity and population structure of potato landraces and varieties in China. Frontiers in Plant Science. 10:ArticleNo.139.
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2019.
Collaborative governance arrangements to deliver spatially coordinated agri-environmental management. Land Use Policy. 69:175-192.
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2017.
Cohort variation in individual body mass dissipates with age in large herbivores. Ecological Monographs. 86:517-543.
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2016.
Cohort variation in individual body mass dissipates with age in large herbivores. Ecological Monographs. 86:517-543.
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2016.
CO2 fluxes from drained and rewetted peatlands using a new ECOSSE model water table simulation approach. Science of Total Environment. 754:ArticleNo.142433.
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2021.
Co-ordinated gene expression during phases of dormancy release in raspberry (Rubus idaeus L.) buds.. Journal of Experimental Botany. 58:1035-1045. Abstract
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2007.
A cloud based tool for knowledge exchange on local scale flood risk. Journal of Environmental Management. 161:38-50.
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2015.
Closing the loop on phosphorus loss from intensive agricultural soil: a microbial immobilization solution? Frontiers in Microbiology. 9:ArticleNo.4..
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2018.
Clonal turnover of MACE-carrying peach-potato aphids (Myzus persicae (Sulzer), Homoptera: Aphididae) colonizing Scotland. Bulletin of Entomological Research. 98:115-124. Abstract
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2008.
Climbing ev'ry mountain: How do landscape features affect gene exchange among Scottish red deer populations? Deer, The Journal of the British Deer Society. 14:38-41.
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2008.
Climatic drivers of plant-plant interactions and diversity in alpine communities. Alpine Botany. 121:63-70.
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2011.
Climate, pollution and grazing drive long-term change in moorland habitats. Applied Vegetation Science. 20:194-203.
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2017.
Climate change? No, wise resource use is the issue: social representations of energy, climate change and the future Environmental Policy and Governance. 22:161-176.
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2012.
Climate change, drought risk and land capability for agriculture: implications for land-use in Scotland. Regional Environmental Change. 11:503-518.
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2011.
Climate change may account for the decline in British ring ouzels Turdus torquatus. Journal of Animal Ecology. 75(3):826-835.
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2006.
Climate change impact and adaptation for wheat protein. Global Change Biology. 25:155-173.
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2019.
Climate and density dependence cause changes in adult sex ratio in a large Arctic herbivore. Ecosphere. 8:ArticleNo.e01699.
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2017.
Clay mineral type effect on bacterial enteropathogen survival in soil. Science of the Total Environment. 468-469:302-305.
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2014.
Classifying multi-model wheat yield impact response surfaces showing sensitivity to temperature and precipitation change. Agricultural Systems. 159:209-224.
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2018.
Classifying multi-model wheat yield impact response surfaces showing sensitivity to temperature and precipitation change. Agricultural Systems. 159:209-224.
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2018.
Clade composition of a plant community indicates its phylogenetic diversity. Ecology and Evolution. 10:3747-3757.
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2020.
Citizen science evidence from the past century shows that Scottish rivers are warming. Science of the Total Environment. 659:53-65.
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2019.
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2015.
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2014.
A chromosome conformation capture ordered sequence of the barley genome. Nature. 544:427-433.
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2017.
Chromatin dynamics during interphase and cell division similarities and differences between model and crop plants. Journal of Experimental Botany, Published online..
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In Press.
A cholesterol-based allostery model of T cell receptor phosphorylation. Immunity. 44:1091-1101.
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2016.
A chloroplast retrograde signal regulates nuclear alternative splicing. Science. 344:427-430.
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2014.
Chloroplast DNA microsatellite analysis supports a polyphyletic origin for barley. Theoretical and Applied Genetics. 110:613-619.
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2005.
Chlorophyll fluorescence and flowering behaviour of annual-fruiting raspberry cultivars under elevated temperature regimes. European Journal of Horticultural Science. 78:193-202.
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2013.
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2005.
Chitin-binding protein of verticillium nonalfalfae disguises fungus from plant chitinases and suppresses chitin-triggered host immunity. Molecular Plant Microbe Interactions. 32:1378-1390.
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2019.
Chemical speciation studies on DU contaminated soils using flow field flow fractionation linked to inductively coupled plasma mass spectrometry (FIFFF-ICP-MS). Journal of Environmental Monitoring. 14:782-790.
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2012.
Chemical solutions for grey water recycling. Chemosphere. 71:147-155.
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2008.
Chemical characterisation of bog peat and dried peat of the Australian Alps. Australian Journal of Soil Research. 43:963-971. Abstract
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2005.
Characterization of the interactions between Cucumber mosaic virus and Potato virus Y in mixed infections in tomato. Molecular Plant-Microbe Interactions. 23:1514-1524.
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2010.
Characterization of Phytophthora infestans populations in northwestern Algeria during 2008-2014. Fungal Biology. 121:467-477.
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2017.
Characterization of Phytophthora infestans populations in Cyprus, the southernmost potato-producing European country. Plant Disease. Published online.
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2021.
Characterization of immune system cell subsets in fixed tissues from alpine chamois (Rupicapra rupicapra). Journal of Comparative Pathology. 155:207-212.
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2016.
Characterization of immune cell infiltration in the placentome of water buffaloes (Bubalus bubalis) infected with Neospora caninum during pregnancy. Journal of Comparative Pathology. 150:463-468.
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2014.
Characterization of cell death inducing Phytophthora capsici CRN effectors suggests diverse activities in the host nucleus. Frontiers in Plant Science. 4
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2013.
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2008.
Characterisation of the cellulose binding protein Mj-cbp-1 of the root knot nematode, Meloidogyne javanica. Physiological and Molecular Plant Pathology. 72:21-28. Abstract
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2008.
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2005.
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2009.
Characterisation of Fusarium sp. responsible for causing dry rot of potato in Great Britain. Plant Pathology. 57:262-271. Abstract
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2008.
Characterisation and pathogenicity of Fusarium taxa isolated from ragwort (Jacobaea vulgaris) roots. Fungal Ecology. 20:186-192.
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2016.
Chapter one - Plant-microbiota interactions as a driver of the mineral turnover in the rhizosphere. Advances in Applied Microbiology. 95:1-67.
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2016.
Chapter 4 - Diversity-function relationships in natural, applied and engineered microbial ecosystems. Advances in Applied Microbiology. 105:131-189.
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2018.
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2012.
Changes in the phenology of the ground beetle Pterostichus madidus (Fabricius, 1775). Insect Science. 18:462-472.
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2011.
Changes in the management of Scottish machair communities and associated habitats from the 1970s to the present. Scottish Geographical Journal. 127:267-287.
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2011.
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2007.
Changes in fungal community composition in response to vegetational succession during the natural regeneration of cutover peatlands. Microbial Ecology. 54(3):508-522.
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2007.
Changes in ecosystem structure, function and hydrological connectivity control water, soil and carbon losses in semi-arid grass to woody vegetation transitions. Earth Surface Processes and Landforms. 38:1602-1611.
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2013.
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2014.
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2008.
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2018.
Challenges of reducing phosphorus based water eutrophication in the agricultural landscapes of Northwest Europe. Frontiers in Marine Science. 5:ArticleNo.276.
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2018.
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In Press.
Challenges and opportunities for animal conservation from renewable energy development. Animal Conservation. 16:367-369.
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2013.
The challenge of developing effective soil conservation policies (editorial). Land Degradation and Development, Special Issue, The Challenge of Effective Soil Conservation Policies. 22:1-4.
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2011.
Cereal variety identification using MALDI-TOF mass spectrometry SNP genotyping. Journal of Cereal Science. 52:356-361.
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2010.
Cereal landraces for sustainable agriculture. A review (Review). Agronomy for Sustainable Development. 30:237-269.
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2010.
Cereal aphid colony turnover and persistence in winter wheat. PLoS ONE. 9:e106822.
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2014.
Cellular responses to the metal-binding properties of metformin. Diabetes. 61:1423-1433.
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2012.
Cell size influences inorganic carbon acquisition in artificially selected phytoplankton. New Phytologist. 229:2647-2659.
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2021.
Catalysing transdisciplinary synthesis in ecosystem science and management. Science of the Total Environment. 534:1-3.
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2015.
The cascading impacts of livestock grazing in upland ecosystems: a 10 year experiment. Ecosphere. 6:ArticleNo.42..
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2015.
The carotenoid biosynthetic and catabolic genes in wheat and their association with yellow pigments. BMC Genomics. 18:ArticleNo.122..
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2017.
Carbon, water and energy exchange dynamics of a young pine plantation forest during the initial fourteen years of growth. Forest Ecology and Management. 410:12-26.
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2018.
The carbon partitioning of glucose and DIC in mixotrophic, heterotrophic and photoautotrophic cultures of Tetraselmis suecica. Biotechnology Letters. Published online..
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2021.
Carbon in tundra soils in the Lake Labaz region of arctic Siberia. European Journal of Soil Science. 58(5):1164-1174.
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2007.
Car park charging in the Cairngorms National Park. Scottish Geographical Journal. 122(3):204-222.
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2008.
Capacity and willingness of farmers and citizen scientists to monitor crop pollinators and pollination services. Global Ecology and Conservation. 20:ArticleNo.e00781.
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2019.
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2021.
Can faecal markers detect a short term reduction in forage intake by cattle? Animal Feed Science and Technology. 194:44-57.
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2014.
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2010.
Can biogas digesters help to reduce deforestation in Africa? Biomass and Bioenergy. 70:87-98.
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2014.
Call for transparency of COVID-19 models. Science. 368:482-483.
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2020.
Calcium polysulfide remediation of hexavalent chromium from chromite ore processing residue. The Science of the Total Environment. 364(1-3):32-44.
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2006.
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2018.
Calcium plus magnesium indicates digestibility. Ecology Letters. 21:885-895.
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2018.
Cajal bodies and their role in plant stress and disease responses. RNA Biology. 14:779-790.
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2016.
Cadmium, lead, and zinc mobility and plant uptake in a mine soil amended with sugarcane straw biochar. Environmental Science and Pollution Research. 22:17606-17614.
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2015.
The C-terminus of the Polerovirus P5 readthrough domain limits virus infection to the phloem. Journal of Virology. 83:5419-5429. Abstract
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2009.
C-13 PLFAs: a key to open the soil microbial black box? Plant and Soil. 392:3-15.
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2015.
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2013.
Buffering effects of seed banks on plant community diversity in response to land use and climate. Global Ecology and Biogeography. 30:128-139.
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2021.
Browsing affects intra-ring carbon allocation in species with contrasting wood anatomy. Tree Physiology. 31:150-159.
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2011.
Browsed Betula pubescens trees are not carbon-limited. Functional Ecology. 22(5):808-815.
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2008.
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2010.
Bridging the gap between national and ecosystem accounting application in Andalusian Forests, Spain. Ecological Economics. 157:218-236.
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2019.
A bootstrap estimation scheme for chemical compositional data with nondetects. Journal of Chemometrics. 28:585-599.
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2014.
The BMW model evaluation tool: a guidance document. Archiv fur Hydrologie: Large Rivers Supplement. 17:23-48.
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2006.
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2010.
Birds bias offspring sex ratio in response to livestock grazing. Biology Letters. 7:958-960.
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2011.
Biosynthesis of branched-chain amino acids is essential for effective symbioses between betarhizobia and Mimosa pudica. Microbiology. 158:1758-1766.
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2012.
Biomass, feed quality, mineral concentration and grain yield responses to potassium fertiliser of dual-purpose crops. New Zealand Journal of Agricultural Research. 62:476-494.
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2019.
Biological characterisation of Globodera pallida from Idaho. Nematology. 14:817-826.
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2012.
Biological and physical resilience of soil amended with heavy metal-contaminated sewage sludge. European Journal of Soil Science. 56:197-206. Abstract
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2005.
Biogeography of plant root-associated fungal communities in the North Atlantic region mirrors climatic variability. Journal of Biogeography. 46:1532-1546.
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2019.
Biodiversity offsetting: what are the challenges, opportunities and research priorities for animal conservation? Animal Conservation. 18:1-3.
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2015.
Biodiversity gains? The debate on changes in local- vs global-scale species richness Biological Conservation. 219:A1-A3.
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2018.
Bioconda: A sustainable and comprehensive software distribution for the life sciences. Nature Methods. 15:475-476.
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2018.
Bioclimatic envelope model of climate change impacts on blanket peatland distribution in Great Britain. Climate Research. 45:151-162.
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2010.
Biochar application to a contaminated soil reduces the availability and plant uptake of zinc, lead and cadmium. Journal of Environmental Management. 159:86-93.
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2015.
Biochar addition to an arsenic contaminated soil increases arsenic concentrations in the pore water but reduces uptake to tomato plants (Solanum lycopersicum L.). Science of the Total Environment. 454-455:598-603.
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2013.
Bioaccumulation of persistent organic pollutants in the deepest ocean fauna. Nature Ecology and Evolution. 1:ArticleNo.0051.
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2017.
Bioaccessible raspberry extracts enriched in ellagitannins and ellagic acid derivatives have anti-neuroinflammatory properties. Antioxidants. 9:ArticleNo.970.
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2020.
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2017.
Beyond the black box: promoting mathematical collaborations for elucidating interactions in soil ecology. Ecosphere. 10:ArticleNo.e02799.
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2019.
Beyond participation! Social-ecological innovations facilitating movement from technocratic state to collaborative landscape governance in Ukraine. Landscape Ecology. Published online..
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In Press.
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2019.
Between straitjacket and possibility: Energy initiatives and the politics of regulation. Geoforum. 114:14-25.
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2020.
Between migration load and evolutionary rescue: dispersal, adaptation and the response of spatially structured populations to environmental change. Proceedings of the Royal Society Series B. 281:1471-2954.
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2014.
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2014.
Benchmarking plant diversity of Palaearctic grasslands and other open habitats. Journal of Vegetation Science. 32:ArticleNo.e13050.
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2021.
Bayesian-multiplicative treatment of count zeros in compositional data sets. Central European Journal of Biology. 15:134-158.
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2014.
Bayesian-multiplicative treatment of count zeros in compositional data sets. Central European Journal of Biology. 15:134-158.
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2015.
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2016.
Basidiomycete fungal communities in Australia sclerophyll forest soil are altered by repeated prescribed burning. Mycological Research. 111(4):482-486.
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2007.
Baseline simulation for global wheat production with CIMMYT mega-environment specific cultivars. Field Crops Research. 202:122-135.
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2017.
Baseline health and disease assessment of founder eastern quolls (Dasyurus Viverrinus) during a conservation translocation to mainland Australia. Journal of Wildlife Diseases. 56:547-559.
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2020.
Barley: a translational model for adaptation to climate change. New Phytologist. 206:913-931.
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2015.
Barley yield formation under abiotic stress depends on the interplay between flowering time genes and environmental cues. Scientific Reports. 9:ArticleNo.6397.
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2019.
Barley whole exome capture: a tool for genomic research in the genus Hordeum and beyond. Plant Journal. 76:494-505.
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2013.
The barley phytomer. Annals of Botany. 100:725-733. Abstract
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2007.
Barley genotype influences stabilization of rhizodeposition-derived C and soil organic matter mineralization. Soil Biology and Biochemistry. 95:60-69.
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2016.
Barley adaptation and improvement in the Mediterranean basin. Plant Breeding. 127:554-560.
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2008.
The bacterial community associated with adult vine weevil (Otiorhynchus sulcatus) in UK populations growing on strawberry is dominated by Candidatus Nardonella. Entomologia Experimentalis et Applicata. 167:186-196.
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2019.
Bacterial chemoattraction towards jasmonate plays a role in the entry of Dickeya dadantii through wounded tissues. Molecular Microbiology. 74:662-671.
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2009.
BacHBerry: BACterial Hosts for production of Bioactive phenolics from bERRY fruits. Phytochemistry Reviews. 17:291-326.
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2018.
BacA is essential for bacteroid development in nodules of galegoid, but not phaseoloid, legumes. Journal of Bacteriology. 192:2920-2928.
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2010.
Avirulence protein 3a (AVR3a) from the potato pathogen Phytophthora infestans forms homodimers through its predicted translocation region and does not specifically bind phospholipids. Journal of Biological Chemistry. 287:38101-38109.
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2012.
Automatic reconstruction of 3D environment using real terrain data and satellite images. Intelligent Automation and Soft Computing. 18:49-63.
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2012.
Automatic fruit recognition and counting from multiple images. Biosystems Engineering. 118:203-215.
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2014.
Automated estimation of leaf area development in sweet pepper plants from image analysis. Functional Plant Biology. 42:486-492.
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2015.
Automated co-registration and calibration in SfM photogrammetry for landslide change detection. Earth Surface Processes and Landforms. 44:287-303.
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2019.
Atypical late blight symptoms following first recorded infections by Phytophthora infestans genotype EU_39_A1 in UK vine tomatoes. New Disease Reports. 39:ArticleNo.16.
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2019.
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2015.
The attack of the clones: tracking the movement of insecticide-resistant peach-potato aphids Myzus persicae (Hemiptera: Aphididae). Bulletin of Entomological Research. 95:483-494. Abstract
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2005.
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2015.
Atomic spectrometry update: atomic mass spectrometry. Journal of Analytical Atomic Spectrometry. 22(8):973-1006.
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2007.
Atomic spectrometry update. Atomic mass spectrometry. Journal of Analytical Atomic Spectrometry. 23
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2008.
Atomic spectrometry update - atomic mass spectrometry. Journal of Analytical Atomic Spectrometry. 21(8):785-818.
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2006.
Atmospheric CO2 enrichment and nutrient additions to planted soil increase mineralisation of soil organic matter, but do not alter microbial utilisation of plant and soil C-sources. Soil Biology and Biochemistry. 40(9):2434-2440.
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2008.
Association mapping and genetic dissection of drought-induced canopy temperature differences in rice. Journal of Experimental Botany. 71:1614-1627.
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2020.
Assimilation of optical and radar remote sensing data in 3D mapping of soil properties over large areas. Science of the Total Environment.
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2017.
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2015.
Assessment of irrigation pricing policies: a data development analysis approach. Environment and Natural Resources Research. 3:10-23.
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2013.
Assessment of CaMV-mediated gene silencing and integration of CaMV into GM plants with a 35S RNA promoter. Environmental Biosafety Research. 6:259-270. Abstract
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2007.
Assessing the vulnerability of blanket peat to climate change using an ensemble of statistical bioclimatic envelope models. Climate Research. 45:131-150.
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2010.
Assessing the influence of compost and biochar amendments on the mobility and toxicity of metals and arsenic in a naturally contaminated mine soil. Environmental Pollution. 186:195-202.
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2014.
Assessing the impact of past wapiti introductions into Scottish Highland red deer populations using a Y chromosome marker. Mammalian Biology. 76:640-643.
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2011.
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2015.
Assessing species and community functional responses to environmental gradients: which multivariate methods? Journal of Vegetation Science. 23:805-821.
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2012.
Assessing recovery from acidification of European surface waters in the year 2010: evaluation of projections made with the MAGIC model in 1995. Environmental Science and Technology. 48:13280-13288.
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2014.
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2010.
Assessing pig body language: agreement and consistency between pig farmers, veterinarians, and animal activists. Journal of Animal Science. 90:3652-3665.
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2012.
Assessing environmental impacts of genetically modified plants on non-target organisms: The relevance of in planta studies. Science of the Total Environment. 583:123-132.
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2017.
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2020.
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2014.
Assembly of microbial communities in replicate nutrient-cycling model ecosystems follows divergent trajectories, leading to alternate stable states. Environmental Microbiology. 19:3374-3386.
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2017.
Ash dieback in the UK: a review of the ecological and conservation implications and potential management options. Biological Conservation. 175:95-109.
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2014.
Ascorbic acid conjugates isolated from the phloem of Cucurbitaceae. Phytochemistry. 69:1850-1858. Abstract
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2008.
Aryl hydrocarbon receptor activation during in vitro and in vivo digestion of raw and cooked broccoli (brassica oleracea var.Italica). Food and Function. 11:4026-4037.
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2020.
Are scientific editors reliable gatekeepers of the publication process. Biological Conservation. 238:ArticleNo.108232.
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2019.
Are richness patterns of common and rare species equally well explained by environmental variables? Ecography. 34(4):529-539.
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2010.
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2011.
Are humus forms, mesofauna and microflora in subalpine forest soils sensitive to thermal conditions? Biology and Fertility of Soils. 48:709-725.
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2012.
Arbuscular mycorrhizal hyphae promote priming of native soil organic matter mineralisation. Plant and Soil. Published online..
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2016.
Arbuscular mycorrhizal hyphae promote priming of native soil organic matter mineralisation. Plant and Soil. 408:243-254.
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2016.
Arbuscular mycorrhizal fungi and aphids interact by changing host plant quality and volatile emission. Functional Ecology. 28:375-385.
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2014.
Arable wildflowers have potential as living mulches for sustainable agriculture. Plant Ecology and Diversity. Published online..
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2021.
Applying pedagogical theories to analyse and understand learning in participatory scenario planning. Futures. 128:ArticleNo.102710.
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2021.
Application of co-composted biochar significantly improved plant-growth relevant physical/chemical properties of a metal contaminated soil. Chemosphere. 242:ArticleNo.UNSP125255.
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2020.
APETALA2 functions as a temporal factor together with BLADE-ON-PETIOLE2 and MADS29 to control flower and grain development in barley. Development. 148:ArticleNo.dev194894.
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2021.
APETALA2 control of barley internode elongation. Development. 146:ArticleNo.dev170373.
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2019.
Antler growth as a cost of reproduction in female reindeer. Oecolgia. 189:601-609.
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2019.
Antiviral activity of HPMPC (cidofovir) against orf virus infected lambs. Antiviral Research. 73:169-174. Abstract
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2007.
Antioxidant properties and neuroprotective capacity of strawberry tree fruit (Arbutus unedo). Nutrients. 2:214-229.
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2010.
Anthocyanin-enriched bilberry and blackcurrant extracts modulate amyloid precursor protein processing and alleviate behavioral abnormalities in the APP/PS1 mouse model of Alzheimer's disease. Journal of Nutritional Biochemistry. 24:360-370.
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2013.
Animal conservation and ecosystem services: garnering the support of mightier forces. Animal Conservation. 13:523-525.
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2010.
Animal conservation and ecosystem services: garnering the support of mightier forces. Animal Conservation. 13(6):523-525.
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2010.
Anchoring and ordering NGS contig assemblies by population sequencing (POPSEQ). Plant Journal. 76:718-727.
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2013.
An ancestral oomycete locus contains late blight avirulence gene Avr3a, encoding a protein that is recognised in the host cytoplasm. Proceedings of the National Academy of Sciences, USA. 102:7766-7771. Abstract
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2005.
Analyzing wildland fire smoke emissions data using compositional data techniques. Journal of Geophysical Research Atmospheres. 125:ArticleNo.e2019JD032128.
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2020.
Analyzing lateral root development: how to move forward. The Plant Cell. 24:15-20.
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2012.
Analysis of the distribution of marker classes in a genetic linkage map: A case study in Norway Spruce (Picea.abies Karst). Tree Genetics and Genomes. 1:93-102. Abstract
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2005.
Analysis of survival and hatching transcriptomes from potato cyst nematodes, Globodera rostochiensis and G. pallida. Science Reports. 7:ArticleNo.3882.
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2017.
Analysis of root growth from a phenotyping data set using a density-based model. Journal of Experimental Botany. 67:1045-1058.
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2016.
Analysis of root growth from a phenotyping data set using a density-based model. Journal of Experimental Botany.. 67:1045-1058.
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2016.
Analysis of ESTs generated from inner bark tissue of an Acacia auriculiformis x Acacia mangium hybrid. Tree Genetics and Genomes. 7:143-152.
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2011.