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Paajanen P, Kettleborough G, Lopez-Girona E, Giolai M, Heavens D, Baker D, Lister A, Cugliandolo F, Wilde G, Hein I et al..  2019.  A critical comparison of technologies for a plant genome sequencing project. GigaScience. 8:ArticleNo.UNSPgiy163.
Pacak A, Strozycki PM, Barciszewska-Pacak M, Alejska M, Lacomme C, Jarmolowski A, Szweykowska-Kulinska Z, Figlerowicz M.  2010.  The brome mosaic virus-based recombination vector triggers a limited gene silencing response depending on the orientation of the inserted sequence. Archives of Virology. 155:169-179.
Pachepsky E, Bown JL, Eberst A, Bausenwein U, Millard P, Squire GR, Crawford JW.  2007.  Consequences of intraspecific variation for the structure and function of ecological communities Part 2: Linking diversity and function. Ecological Modelling. 207:277-285. Abstract
Pachepsky E, Bown JL, Eberst A, Bausenwein U, Millard P, Squire G, Crawford JW.  2007.  Consequences of intraspecific variation for the structure and function of ecological communities. II Linking diversity and function. Ecological Modelling. 207(2-4):277-285.
Pagaling E, Gatica J, Yang K, Cytryn E, Yan T.  2016.  Phylogenetic diversity of ceftriaxone resistance and the presence of extended-spectrum beta-lactamase genes in the culturable soil resistome. Journal of Global Antimicrobial Resistance.
Pagaling E, Vassileva K, Mills CG, Bush T, Blythe RA, Schwarz-Linek J, Strathdee F, Allen RJ, Free A.  2017.  Assembly of microbial communities in replicate nutrient-cycling model ecosystems follows divergent trajectories, leading to alternate stable states. Environmental Microbiology. 19:3374-3386.
Pages M, Fischer A, van der Wal R.  2018.  The dynamics of volunteer motivations for engaging in the management of invasive plants: insights from a mixed-methods study on Scottish seabird islands. Journal of Environmental Planning and Management. 61:904-923.
Pagès M, Fischer A, van der Wal R, Lambin X.  2019.  Empowered communities or "cheap labour"? Engaging volunteers in the rationalised management of invasive alien species in Great Britain Journal of Environmental Management. 228:102-111.
Pagès M, Fischer A, van der Wal R.  2018.  The dynamics of volunteer motivations for engaging in the management of invasive plants: insights from a mixed-methods study on Scottish seabird islands. Journal of Environmental Planning and Management. 61:904-923.
Pai B, Siripornmongcolchai T, Berentsen B, Pakzad A, Vieuille C, Pallesen S, Pajak M, Simpson TI, Armstrong JD, Wibrand K et al..  2014.  NMDA receptor-dependent regulation of miRNA expression and association with Argonaute during LTP in vivo. Frontiers in Cellular Neuroscience. 7
Painter B, Irvine KN, Waskett RK, Mardaljevic J.  2016.  Evaluation of a mixed method approach for studying user interaction with novel building control technology. Energies. 9:215.
Pakeman RJ, Fielding DA.  2020.  A functional assessment of the impact of changing grazing management of upland grassland mosaics. Applied Vegetation Science. 23:539-550.
Pakeman RJ, Lewis RJ.  2018.  Functional similarity analysis highlights ecosystem impacts and restoration needs. Applied Vegetation Science. 21:258-266.
Pakeman RJ, Garnier E, Lavorel S, Ansquer P, Castro H, Cruz P, Dolezal J, Eriksson O, Golodets C, Kleyer M et al..  2008.  Impact of abundance weighting on the response of seed traits to climate and land use. Journal of Ecology. 96(2):355-366.
Pakeman RJ, Hewison RL, Riach D, Fisher J, Hurskianen S, Fielding D, Mitchell RJ.  2017.  Long-term structural and functional diversity changes in Scottish grasslands. Agriculture, Ecosystems and Environment. 247:352-362.
Pakeman RJ, McKeen M.  2019.  Within country targeting of agri-environment funding: a test of different methods. Global Ecology and Conservation. 17:ArticleNo.e00574.
Pakeman RJ, Nolan AJ.  2009.  Setting sustainable grazing levels for heather moorland: a multi-site analysis. Journal of Applied Ecology. 46(2):363-368.
Pakeman RJ, Brooker RW, O'Brien D, Genney D.  2019.  Using species records and ecological attributes of bryophytes to develop an ecosystem health indicator. Ecological Indicators. 104:127-136.
Pakeman RJ.  2014.  Functional trait metrics are sensitive to the completeness of the species' trait data? Methods in Ecology and Evolution. 5:9-15.
Pakeman RJ, Stockan J.  2013.  Using plant functional traits as a link between land use and bee foraging abundance. Acta Oecologia. 50:32-39.
Pakeman RJ, Hewison RL, Lewis RJ.  2017.  Drivers of species richness and compositional changes in Scottish coastal vegetation. Applied Vegetation Science. 20:183-193.
Pakeman RJ, Alexander J, Brooker R, Cummins R, Fielding D, Gore S, Hewison R, Mitchell R, Moore E, Erford K et al..  2016.  Long-term impacts of nitrogen deposition on coastal plant communities. Environmental Pollution. 221:337-347.
Pakeman RJ, Small JL, Torvell L.  2012.  Edaphic factors influence the longevity of seeds in the soil. Plant Ecology. 213:57-65.
Pakeman RJ, Bates A, Corlett RT, Cumming GS, Johns D, Koh LP, Loyola R, Maas B, Pejchar L, Primack RB et al..  2019.  Fifty years of Biological Conservation. (Editorial). Biological Conservation. 230:A1-A4.
Pakeman RJ, Leps J, Kleyer M, Lavorel S, Garnier E, consortium V.  2009.  Relative climatic, edaphic and management controls of plant functional trait signatures. Journal of Vegetation Science. 20(1):148-159.
Pakeman RJ, Eastwood A.  2013.  Shifts in functional traits and functional diversity between vegetation and seedbank. Journal of Vegetation Science. 24:865-876.
Pakeman RJ, Lennon JJ, Brooker RW.  2011.  Trait assembly in plant assemblages and its modulation by productivity and disturance. Oecologia. 167:209-218.
Pakeman RJ, Beaton JK, Thoss V, Lennon JJ, Campbell CD, White D, Iason GR.  2006.  The extended phenotype of Scots pine (Pinus sylvestris) structures the understorey assemblage. Ecography. 29(3):451-457.
Pakeman RJ, Marriott CA.  2010.  A functional assessment of the response of grassland vegetation to reduced grazing and abandonment. Journal of Vegetation Science.. 21(4):683-694.
Pakeman RJ, Hewison RL, Riach D, Fisher J, Hurskianen S, Fielding D, Mitchell RJ.  2017.  Long-term functional structure and functional diversity changes in Scottish grasslands. Agriculture, Ecosystems and Environment. 247:352-362.
Pakeman RJ, Karley AJ, Newton AC, Morcillo L, Brooker RW, Schob C.  2015.  A trait-based approach to crop-weed interactions. European Journal of Agronomy. 70:22-32.
Pakeman RJ, Huband S, Kriel A, Lewis R.  2011.  Changes in the management of Scottish machair communities and associated habitats from the 1970s to the present. Scottish Geographical Journal. 127:267-287.
Pakeman RJ, Hewison RL, Lewis RJ.  2017.  Linking functional traits and species preferences to species’ abundance and occupancy trends through time to identify habitat changes in coastal ecosystems. Perspectives in Plant Ecology, Evolution and Systematics. 27:35-44.
Pakeman RJ, Small JL.  2009.  Potential and realised contribution of endozoochory to seedling establishments. Basic and Applied Ecology. 10(7):656-661.
Pakeman RJ, Quested HM.  2007.  Sampling plant functional traits: what proportion of the species need to be measured? Applied Vegetation Science. 10(1):91-96.
Pakeman RJ, Alexander J, Beaton J, Brooker R, Cummins R, Eastwood A, Fielding D, Fisher J, Gore S, Hewison R et al..  2015.  Y Species composition of coastal dune vegetation in Scotland has proved resistant to climate change over a third of a century. Global Change Biology. 21:3738-3747.
Pakeman RJ, Eastwood A, Scobie A.  2011.  Leaf dry matter content as a predictor of grassland litter decomposition: a test of the "Mass Ratio Hypothesis". Plant and Soil. 342:49-57.
Pakeman RJ, Reid CL, Lennon JJ, Kent M.  2008.  Possible interactions between environmental factors in determining species optima. Journal of Vegetation Science. 19:201-208.
Pakeman RJ, Brooker RW, Karley AJ, Newton AC, Mitchell C, Hewison RL, Pollenus J, Guy DC, Schöb C.  2020.  Increased crop diversity reduces the functional space available for weeds. Weed Research.. 60:121-131.
Pakeman RJ, Pugnaire F, Michalet R, Lortie C, Schiffers K, Maestre F, Travis J.  2009.  Is the cask of facilitation ready for bottling? A symposium on the connectivity and future directions of positive plant interactions Biology Letters. 5(5):577-579.
Pakeman RJ, Fielding DA, Everts L, Littlewood NA.  2019.  Long term impacts of changed grazing regimes on the vegetation of heterogeneous upland grasslands. Journal of Applied Ecology. 56:1794-1805.
Palacio S, Paterson E, Hester AJ, Nogues S, Lino G, Anandon-Rosell A, Maestro M, Millard P.  2020.  No preferential carbon allocation to storage over growth in clipped birch and oak saplings. Tree Physiology. 40:621-636.
Palacio S, Hester AJ, Maestro M, Millard P.  2013.  Simulated browsing affects leaf shedding phenology and litter quality of oak and birch saplings. Tree Physiology. 33:438-445.
Palacio S, Paterson E, Sim A, Hester AJ, Millard P.  2011.  Browsing affects intra-ring carbon allocation in species with contrasting wood anatomy. Tree Physiology. 31:150-159.
Palacio S, Milla R, Albuixech J, Perez-Rontome C, Camarero JJ, Maestro M, Montserrat-Marti G.  2008.  Seasonal variability of dry matter content and its relationship with shoot growth and nonstructural carbohydrates. New Phytologist. 180(1):133-142.
Palacio S, Hester AJ, Maestro M, Millard P.  2008.  Browsed Betula pubescens trees are not carbon-limited. Functional Ecology. 22(5):808-815.
Palacio S, Millard P, Maestro M, Montserrat-Marti G.  2007.  Non-structural carbohydrates and nitrogen dynamics in Mediterranean sub-shrubs: an analysis of the functional role of over-wintering leaves. Plant Biology. 9(1):49-58.
Palacio S, Aitkenhead MJ, Escudero A, Montserrat-Marti G, Maestro M, Robertson J.  2014.  Gypsophile chemistry unveiled: Fourier transform infrared (FTIR) spectroscopy provides new insight into plant adaptations to gypsum soils. PLoS ONE. 9:e107285.
Palarea-Albaladejo J, Antoni Martin-Fernandez J, Soto JA.  2012.  Dealing with distances and transformations for fuzzy c-means clustering of compositional data. Journal of Classification. 29:144-169.
Palarea-Albaladejo J, Martin-Fernandez JA, Olea RA.  2014.  A bootstrap estimation scheme for chemical compositional data with nondetects. Journal of Chemometrics. 28:585-599.
Palarea-Albaladejo J, Martin-Fernandez JA.  2015.  zCompositions - R Package for multivariate imputation of left-censored data under a compositional approach. Chemometrics and Intelligent Laboratory Systems. 143:85-96.
Palarea-Albaladejo J, Martin-Fernandez JA, Buccianti A.  2014.  Compositional methods for estimating elemental concentrations below the limit of detection in practice using R. Journal of Geochemical Exploration. 141:71-77.
Palarea-Albaladejo J, McKendrick I.  2020.  Research Comment: Best practice for the design and statistical analysis of animal studies. Veterinary Record. 186:59-64.
Palarea-Albaladejo J, Martin-Fernandez JA.  2013.  Values below detection limit in compositional chemical data. Analytica Chimica Acta. 764:32-43.
Palmer JS, Hough RL, West HM, Avery LM.  2019.  A review of the abundance, behaviour and detection of clostridial pathogens in agricultural soils. European Journal of Soil Science. 70:911-929.
Palomares-Rius JE, Hirooka Y, Tsai IJ, Masuya H, Hino A, Kanzaki N, Jones JT, Kikuchi T.  2014.  Distribution and evolution of glycoside hydrolase family 45 cellulases in nematodes and fungi. BMC Evolutionary Biology. 14
Palomares-Rius JE, Jones JT, Cock PJ, Castillo P, Blok VC.  2013.  Activation of hatching in diapaused and quiescent Globodera pallida. Parasitology. 140:445-454.
Palomares-Rius JE, Cantalapiedra-Navarette C, Archidona-Yuste A, Blok VC, Castillo P.  2017.  Mitochondrial genomes diversity in dagger and needle nematodes (Nematode: Longidoridae). Scientific Reports. 7
Palomares-Rius JE, Cantalapiedra-Navarette C, Archidona-Yuste A, Blok VC, Castillo P.  2017.  Mitochondrial genome diversity in dagger and needle nematodes (Nematode: Longidoridae). Scientific Reports. 7
Palomares-Rius JE, Hedley PE, Cock PJA, Morris JA, Jones JT, Vovlas N, Blok V.  2012.  Comparison of transcript profiles in different life stages of the nematode Globodera pallida under different host potato genotypes. Molecular Plant Pathology. 13:1120-1134.
Palukaitis P, Carr JP.  2008.  Plant resistance responses to viruses. Journal of Plant Pathology. 90:153-171.
Pan FX, Li YY, Chapman SJ, Yao HY.  2016.  Effect of rice straw application on microbial community and activity in paddy soil under different water status. Environmental Science and Pollution Research. 23:5941-5948.
Pan F, Chapman SJ, Li Y, Yao H.  2017.  Straw amendment to paddy soil stimulates denitrification but biochar amendment promotes anaerobic ammonia oxidation. Journal of Soils and Sediments. 17:2428-2437.
Pan FX, Li YY, Chapman SJ, Khan S, Yao HY.  2016.  Microbial utilization of rice straw and its derived biochar in a paddy soil. Science of the Total Environment.
Pan F, Chapman SJ, Li Y, Yao H.  2017.  Straw amendment to paddy soil stimulates denitrification but biochar amendment promotes anaerobic ammonia oxidation. Journal of Soils and Sediments..
Pan FX, Li YY, Chapman SJ, Yao HY.  2016.  Effect of rice straw application on microbial community and activity in paddy soil under different water status. Environmental Science and Pollution Research. 23:5941-5948.
Pangbourne K, Roberts D.  2015.  Small towns and agriculture: understanding the spatial pattern of farm linkages. European Planning Studies. 23:494-508.
Pantidos N, Boath A, Lund V, Conner S, McDougall GJ.  2014.  Phenolic-rich extracts from the edible seaweed, Ascophyllum nodosum, inhibit alpha-amylase and alpha-glucosidase: Potential anti-hyperglycemic effects. Journal of Functional Foods. 10:201-209.
Paoletti, M.G, Osler GHR, Kinnear A, Black DG, Thomson LJ, Tsitsilas A, Sharley D, Judd S, Neville P et al..  2007.  Detritivores as indicators of landscape stress and soil degradation. Australian Journal of Experimental Agriculture. 47(4):412-423.
Paquette SR, Behncke SM, O'Brien SH, Brenneman RA, Louis EE, Lapointe FJ.  2007.  Riverbeds demarcate distinct conservation units of the radiated tortoise (Geochelone radiata) in southern Madagascar. Conservation Genetics. 8(4):797-807.
Pariser EC, Gilbert L, Hazon N, Arnold KE, Graves JA.  2012.  Mind the gap: the ration of yolk androgens and antioxidants varies between sons and daughters dependent on paternal attractiveness. Behavioral Ecology and Sociobiology. 66:519-527.
Parissi ZM, Abraham EM, Roukos C, Kyriazopoulos AP, Petridis A, Karameri E.  2018.  Seasonal quality assessment of leaves and stems of fodder ligneous species. Notulae Botanicae Horti Agrobotanici Cluj-Napoca. 46:426-434.
Park J, Hackett CA, Dandurand LM, Wang XH, De Jong WS.  2019.  QTL for resistance to Globodera rostochiensis pathotype Ro2 and G. pallida pathotype Pa2/3 in autotetraploid potato. American Journal of Potato Research. 96:552-553.
Parkinson N, Pritchard L, Bryant R, Toth IK, Elphinstone J.  2015.  Epidemiology of Dickeya dianthicola and Dickeya solani in ornamental hosts and potato studied using variable number tandem repeat analysis. European Journal of Plant Pathology. 141:63-70.
Paroli R, Spezia L.  2010.  Reversible jump markov chain Monte Carlo methods and segmentation algorithms in hidden Markov models. Australian & New Zealand Journal of Statistics. 52:151-166.
Parr AJ, Mellon FA, Colquhoun IJ, Davies HV.  2005.  Dihydrocaffeoyl polyamines (kukoamine and allies) in potato (Solanum tuberosum) tubers detected during metabolite profiling. Journal of Agricultural and Food Chemistry. 53:5461-5466. Abstract
Pasanen M, Waleron M, Schott T, Cleenwerck I, Misztak A, Waleron K, Pritchard L, Bakr R, Degefu Y, van der Wolf J et al..  2020.  Pectobacterium parvum sp. nov., having a Salmonella SPI-1-like Type III secretion system and low virulence. International Journal of Systematic and Evolutionary Microbiology. 70:2440-2448.
Pasare SA, Ducreux LJM, Morris WL, Campbell R, Sharma SK, Roumeliotis E, Kohlen W, van der Krol S, Bramley PM, Roberts AG et al..  2013.  The role of the potato (Solanum tuberosum L.) CCD8 gene in stolon and tuber development. New Phytologist. 198:1108-1120.
Pasare S, Wright K, Campbell R, Morris WL, Ducreux LJM, Chapman S, Bramley PM, Fraser PD, Roberts AG, Taylor MA.  2013.  The sub-cellular localisation of the potato (Solanum tuberosum L.) carotenoid biosynthetic enzymes, CrtRb2 and PSY2. Protoplasma. 250:1381-1392.
Pascoalino JAL, Thompson JA, Wright G, Franco FA, Scheeren PL, Pauletti V, Moraes MF, White PJ.  2018.  Grain zinc concentrations differ among Brazilian wheat genotypes and respond to zinc and nitrogen supply. PLoS ONE. 13:ArticleNo.e0199464.
Pasternak Z, Luchibia AO, Matan O, Dawson LA, Gafny R, Shpitzen M, Avraham S, Jurkevitch E.  2018.  Mitigating temporal mismatches in forensic soil microbial profiles. Australian Journal of Forensic Sciences. Published online..
Pasternak Z, Luchibia AO, Matan O, Dawson LA, Gafny R, Shpitzen M, Avraham S, Jurkevitch E.  2019.  Mitigating temporal mismatches in forensic soil microbial profiles. Australian Journal of Forensic Sciences. 51:685-694.
Paterson E, Neilson R, Midwood AJ, Osborne SM, Sim A, Thornton B, Millard P.  2011.  Altered food web structure and C-flux pathways associated with mineralisation of organic amendments to agricultural soil. Applied Soil Ecology. 48:107-116.
Paterson E, Osler GHR, Dawson LA, Gebbing T, Sim A, Ord B.  2008.  Labile and recalcitrant plant fractions are utilised by distinct microbial communities in soil: independent of the presence of roots and mycorrhizal hyphae. Soil Biology and Biochemistry. 40:1103-1113.
Paterson E, Sim A, Standing D, Dorward M, McDonald AJS.  2006.  Root exudation from Hordeum vulgare in response to localised nitrate supply. Journal of Experimental Botany. 57(10):2413-2420.
Paterson E, Midwood AJ, Millard P.  2009.  Through the eye of the needle: A review of isotope approaches to quantify processes mediating soil carbon balance. New Phytologist. 184:19-33.
Paterson E.  2009.  Comments on the Regulatory Gate Hypothesis and implications for C-cycling in soil. Soil Biology and Biochemistry. 41(6):1352-1354.
Paterson E, Sim A, Davidson J, Daniell TJ.  2016.  Arbuscular mycorrhizal hyphae promote priming of native soil organic matter mineralisation. Plant and Soil. Published online..
Paterson E, Sim A, Davidson J, Daniell TJ.  2016.  Arbuscular mycorrhizal hyphae promote priming of native soil organic matter mineralisation. Plant and Soil. 408:243-254.
Paterson E, Gebbing T, Abel C, Sim A, Telfer G.  2007.  Rhizodeposition shapes rhizosphere microbial community structure in organic soil. New Phytologist. 173(3):600-610.
Paterson E, Sim A.  2013.  Soil-specific response functions of organic matter mineralization to the availability of labile carbon. Global Change Biology. 19:1562-1571.
Paterson E, Thornton B, Midwood AJ, Osborne SM, Sim A, Millard P.  2008.  Atmospheric CO2 enrichment and nutrient additions to planted soil increase mineralisation of soil organic matter, but do not alter microbial utilisation of plant and soil C-sources. Soil Biology and Biochemistry. 40(9):2434-2440.
Paterson A, Kassim A, McCallum S, Woodhead M, Smith K, Zait D, Graham J.  2013.  Environmental and seasonal influences on red raspberry flavour volatiles and identification of quantitative trait loci (QTL) and candidate genes. Theoretical and Applied Genetics. 126:33-48.
Pathak AK, Pelensky C, Boag B, Cattadori IM.  2012.  Immuno-epidemiology of chronic bacteria-helminth co-infections: observations from the field and evidence from the laboratory. International Journal of Parasitology. 42:647-655.
Patil V, McDermott HI, McAllister T, Cummins M, Silva JC, Mollison E, Meikle R, Morris J, Hedley PE, Waugh R et al..  2019.  APETALA2 control of barley internode elongation. Development. 146:ArticleNo.dev170373.
Patra AK, Abbadie L, Clays-Josserand A, Degrange V, Grayston SJ, Guillaumaud N, Loiseau P, Louault F, Mahmood S, Nazaret S et al..  2006.  Effects of management regime and plant species on the enzyme activity and genetic structure of N-fixing, denitrifying and nitrifying bacterial communities in grassland soils. Environmental Microbiology. 8(6):1005-1016.
Patras MA, Jaiswal R, McDougall GJ, Kuhnert N.  2018.  Profiling and quantification of regioisomeric caffeoyl glucoses in berry fruits. Journal of Agricultural and Food Chemistry. 66:1096-1104.
Pattemore JA, Rice N, Marshall DF, Waugh R, Henry RJ.  2010.  Cereal variety identification using MALDI-TOF mass spectrometry SNP genotyping. Journal of Cereal Science. 52:356-361.
Patton V, Ewald J, Smith AA, Newey SJ, Iason GR, Thirgood SJ, Raynor R.  2010.  Distribution of mountain hares (Lepus timidus) in Scotland: results from a questionnaire. Mammal Review. 40(4):313-326.
Pattrick JG, Shepherd T, Hoppit W, Plowman NS, Willmer P.  2017.  A dual function for 4-methoxybenzaldehyde in Petasites fragrans? Pollinator-attractant and ant-repellent Arthropod-Plant Interactions. 11:623-627.
Paula FS, Chin JP, Schnurer A, Muller B, Manesiotis P, Waters N, Macintosh KA, Quinn JP, Connolly J, Abram F et al..  2019.  The potential for polyphosphate metabolism in Archaea and anaerobic polyphosphate formation in Methanosarcina mazei. Scientific Reports. 9:ArticleNo.17101.
Pawlett M, Hopkins DW, Moffett BF, Harris JA.  2009.  The effect of earthworms and liming on soil microbial communities. Biology and Fertility of Soils. 45:361-369. Abstract
Payen FT, Sykes A, Aitkenhead M, Alexander P, Moran D, MacLeod M.  2021.  Soil organic carbon sequestration rates in vineyard agroecosystems under different soil management practices: a meta-analysis. Journal of Cleaner Production. 290:ArticleNo.125736.
Payne RJ, Campbell C, Britton AJ, Mitchell RJ, Pakeman RJ, Jones L, Ross LC, Stevens C, Field C, Caporn SJM et al..  2019.  What is the most ecologically-meaningful metric of nitrogen deposition? Environmental Pollution. 247:319-331.
Payne RJ, Caporn SJM, Field CD, Carroll JA, Edmondson JL, Britton AJ, Dise NB.  2014.  Heather moorland vegetation and air pollution: a comparison and synthesis of three national gradient studies. Payne, R.J.; Caporn, S.J.M.; Field, C.D.; Carroll, J.A.; Edmondson, J.L.; Britton, A.J.; Dise, N.B. Water, Air and Soil Pollution.. 225:ArticleNo.1198.
Payne RJ, Campbell C, Stevens CJ, Pakeman RJ, Ross LC, Britton AJ, Mitchell RJ, Jones L, Field C, Caporn SJM et al..  2020.  Disparities between plant community responses to nitrogen deposition and critical loads in UK semi-natural habitats. Atmospheric Environment. 239:ArticleNo.117478.
Pearce ISK, Britton AJ, Armitage HF, Jones B.  2010.  Additive impacts of nitrogen deposition and grazing on a mountain moss-sedge heath. Botanica Helvetica.. 120(2):129-137.
Pearce MC, Chase-Topping ME, McKendrick IJ, Mellor DJ, Locking ME, Allison L, Ternent HE, Matthews L, Knight HI, Smith AW et al..  2009.  Temporal and spatial patterns of bovine Escherichia coli O157 prevalence and comparison of temporal changes in the patterns of phage types associated with bovine shedding and human E. coli O157 cases in Scotland between 1998-2000 and 2002-2004. BMC Microbiology. 9:-276.
Pearce-Higgins JW, Yalden DW, Dougall TW, Beale CM.  2009.  Does climate change explain the decline of a trans-Saharan Afro-Palaearctic migrant? Oecologia. 159(3):649-659.
Pearson KA, Taylor AFS, Fuchs RME, Woodward S.  2016.  Characterisation and pathogenicity of Fusarium taxa isolated from ragwort (Jacobaea vulgaris) roots. Fungal Ecology. 20:186-192.
Pebsworth P, Hillier S, Wendler R, Glahn R, Ta CAK, Arnason J, Young SL.  2019.  Geophagy among East African chimpanzees: consumed soils provide protection from plant secondary compounds and bioavailable iron. Environmental Geochemistry and Health. 41:2911-2927.
Pecinka A, Chevalier C, Colas I, Kalantidis K, Varotto S, Krugman T, Michailidis C, Vallés MP, Muñoz A, Pradillo M.  In Press.  Chromatin dynamics during interphase and cell division similarities and differences between model and crop plants. Journal of Experimental Botany, Published online..
Pedersen ML, Friberg N, Skriver J, Baattrup-Pedersen A, Larsen SE.  2007.  Restoration of Skjern River and its valley: short-term effects on river habitats, macrophytes and macroinvertebrates. Ecological Engineering. 30(2):145-156.
Pedersen S, Andreassen HP, Keith DA, Skarpe C, Dickman CR, Gordon IJ, Crowther MS, McArthur C.  2014.  Relationships between native small mammals and native and introduced large herbivores. Austral Ecology. 39:236-243.
Pedersen ML, Friberg N.  2009.  Influence of physical disturbance on habitats and biological communities in lowland streams. Fundamental and Applied Limnology. 174(1):27-41.
Peeters B, Veiberg V, Pedersen AO, Stien A, Irvine RJ, Aanes R, S'Ther BE, Strand O, Hansen BB.  2017.  Climate and density dependence cause changes in adult sex ratio in a large Arctic herbivore. Ecosphere. 8:ArticleNo.e01699.
Pelser PB, Abbott RJ, Comes HP, Milton JJ, Moller M, Looseley ME, Cron GV, Barcelona JF, Kennedy AH, Watson LE et al..  2012.  The genetic ghost of an invasion past: colonization and extinction revealed by historical hybridisation in Senecio. Molecular Ecology. 21:369-387.
Pemberton CL, Whitehead NA, Sebaihia M, Bell KS, Hyman LJ, Harris SJ, Matlin AJ, Robson ND, Birch PRJ, Carr JP et al..  2005.  Novel quorum sensing-controlled genes in Erwinia carotovora subsp. carotovora: identification of a fungal elicitor homologue in a soft-rotting bacterium. Molecular Plant-Microbe Interactions. 18:343-353. Abstract
Pendle AF, Clark GP, Boon R, Lewandowska D, Lam YW, Andersen J, Mann M, Lamond AI, Brown JWS, Shaw PJ.  2005.  Proteomic analysis of the Arabidopsis nucleolus suggests novel nucleolar functions. Molecular Biology of the Cell. 16:260-269.
Peng X, Hallett PD, Zhang B, Horn R.  2011.  Physical response of rigid and non-rigid soils to analogues of biological exudates. European Journal of Soil Science. 62:676-684.
Penhaul Smith JK, Hughes AD, McEvoy L, Thornton B, Day JG.  2021.  The carbon partitioning of glucose and DIC in mixotrophic, heterotrophic and photoautotrophic cultures of Tetraselmis suecica. Biotechnology Letters. Published online..
Penrose B, Payne KAJN, Arkhipov A, Maksimenko A, Gaschak S, Meacham MC, Crout NJM, White PJ, Beresford NA, Broadley MR.  2016.  Inter-cultivar variation in soil-to-plant transfer of radiocaesium and radiostrontium in Brassica oleracea. Journal of Environmental Radioactivity. 155:112-121.
Peppa MV, Mills JP, Moore P, Miller PE, Chambers JE.  2019.  Automated co-registration and calibration in SfM photogrammetry for landslide change detection. Earth Surface Processes and Landforms. 44:287-303.
Perez-Barberia FJ, Robertson E, Soriguer R, Aldezabal A, Mendizabal M.  2007.  Why polygynous ungulates segregate in space? Testing the activity budget hypothesis in Soay sheep Ecological Monographs. 77(4):631-647.
Perez-Barberia J, Ramsay SL, Hooper RJ, Perez-Fernandez E, Robertson AHJ, Aldezabal A, Goddard P, Gordon IJ.  2015.  The influence of habitat on body size and tooth wear in Scottish red deer (Cervus elaphus). Canadian Journal of Zoology. 93:61-70.
Perez-Barberia FJ, Duff EI, Brewer MJ, Guinness FE.  2014.  Evaluation of methods to age Scottish red deer: the balance between accuracy and practicality. Journal of Zoology. 294:180-189.
Perez-Barberia FJ, Walker DM.  2018.  Dynamics of social behaviour at parturition in a gregarious ungulate. Behavioural Processes. 150:75-84.
Perez-Barberia FJ.  2017.  Scaling methane emissions in ruminants and global estimates in wild populations. Science of the Total Environment. 579:1572-1580.
Perez-Barberia FJ, Small M, Hooper RJ, Aldezabal A, Soriguer-Escofet R, Bakken GS, Gordon IJ.  2015.  State-space modelling of the drivers of movement behaviour in sympatric species. PLoS ONE. 10:e0142707.
Perez-Barberia FJ, Carranza J, Sanchez-Prieto C.  2015.  Wear fast, die young: more worn teeth and shorter lives in Iberian compared to Scottish red deer. PLoS ONE. 10:e0134788.
Perez-Barberia FJ, Walker DM, Marion G.  2007.  Maximising intake under challenging foraging conditions at two hierarchical spatial scales in males and females of Soay sheep. Animal Behaviour. 73(2):339-348.
Perez-Barberia FJ, Perez-Fernandez E, Robertson E, Alvarez-Enriquez BE.  2008.  Does the Jarman-Bell principle at intra-specific level explain sexual segregation in polygynous ungulates? Sex differences in forage digestibility in Soay sheep Oecologia. 157(1):21-30.
Perez-Barberia FJ, Yearsley JM.  2010.  Sexual selection for fighting skills as a driver of sexual segregation in polygynous ungulates: an evolutionary model. Animal Behaviour. 80(4):745-755.
Perez-Barberia FJ, Schultz S, Dunbar RIM.  2007.  Evidence for coevolution of sociality and relative brain size in three orders of mammals. Evolution. 61(12):2811-2821.
Perez-Barberia J, Ramsay SL, Hooper RJ, Perez-Fernandez E, Robertson AHJ, Aldezabal A, Goddard P, Gordon IJ.  2015.  The influence of habitat on body size and tooth wear in Scottish red deer (Cervus elaphus). (Corrigendum: vol 93, pg 61, 2015). Canadian Journal of Zoology. 93:249.
Perez-Barberia FJ, Hooper RJ, Gordon IJ.  2013.  Long-term density-dependent changes in habitat selection in red deer (Cervus elaphus). Oecologia. 173:837-847.
Perez-Espona S, McLeod JE, Franks NR.  2012.  Landscape genetics of a top neotropical predator. Molecular Ecology. 21:5969-5985.
Perez-Espona S, Perez-Barberia FJ, McLeod JE, Jiggins CD, Gordon IJ, Pemberton JM.  2008.  Climbing ev'ry mountain: How do landscape features affect gene exchange among Scottish red deer populations? Deer, The Journal of the British Deer Society. 14:38-41.
Perez-Espona S, Perez-Barberia FJ, Pemberton JM.  2011.  Assessing the impact of past wapiti introductions into Scottish Highland red deer populations using a Y chromosome marker. Mammalian Biology. 76:640-643.
Perez-Espona S, Perez-Barberia FJ, McLeod J, Jiggins CJ, Gordon IJ, Pemberton J.  2008.  Landscape features affect gene flow of Scottish Highland red deer (Cervus elaphus). Molecular Ecology. 17(4):981-996.
Perez-Espona S, Perez-Barberia FJ, Jiggins CJ, Gordon IJ, Pemberton J.  2010.  Variable extent of sex-biased dispersal in a strongly polygynous mammal. Molecular Ecology. 19(15):3101-3113.
Perez-Espona S, Perez-Barberia FJ, Goodall-Copestake WP, Jiggins CD, Gordon IJ, Pemberton JM.  2009.  Genetic diversity and population structure of Scottish Highland red deer (Cervus elaphus) populations: a mitochondrial survey. Heredity. 102(2):199-210.
Perez-Espona S, Hall RJ, Perez-Barberia J, Glass BC, Ward JF, Pemberton JM.  2013.  The impact of past introductions on an iconic and economically important species, the red deer of Scotland. Journal of Heredity. 104:14-22.
Perez-Mendoza D, Coulthurst SJ, Humphris S, Campbell E, Welch M, Toth IK, Salmond GPC.  2011.  A multi-repeat adhesin of the phytopathogen, Pectobacterium atrosepticum, is secreted by a Type 1 pathway and is subject to complex regulation involving a non-canonical diguanylate cyclase. Molecular Microbiology. 82:719-733.
Perez-Sancho J, Tilsner J, Samuels AL, Botella MA, Bayer EM, Rosado A.  2016.  Stitching organelles: organization and function of specialized membrane contact sites in plants. Trends in Cell Biology. 26:705-717.
Perez-Schindler J, Kanhere A, Edwards L, Allwood JW, Dunn WB, Schenk S, Philp A.  2017.  Exercise and high-fat feeding remodel transcript-metabolite interactive networks in mouse skeletal muscle. Scientific Reports. 7:ArticleNo.13485..
Perkins DM, Yvon-Durocher G, Demars BOL, Reiss J, Pichler DE, Friberg N, Trimmer M, Woodward G.  2012.  Consistent temperature dependence of respiration across ecosystems contrasting in thermal history. Global Change Biology. 18:1300-1311.
Perrin C, Dilks C, Barlund I, Payan JL, Andreassian V.  2006.  Use of simple rainfall-runoff models as a baseline for the benchmarking of the hydrological component of complex catchment models. Archiv fur Hydrobiologie. Large Rivers Supplement.. 17(102):75-96.
Perry JN, Barberi P, Bartsch D, Birch ANE, Gathmann A, Kiss J, Manachini B, Nuti M, Rauschen S, Schiemann J et al..  2017.  Response to Kruse-Plass et al. (2017) regarding the risk to non-target lepidopteran larvae exposed to pollen from one or more of three Bt maize events (MON810, Bt11 and 1507). Environmental Sciences Europe. 29:ArticleNo.21.
Perry JN, Arpaia S, Bartsch D, Birch ANE, Devos Y, Gathmann A, Gennaro A, Kiss J, Messean A, Mestdagh S et al..  2013.  No evidence requiring change in the risk assessment of Inachis io larvae. Ecological Modelling. 268:103-122.
Pertry I, Nothegger C, Sweet J, Kuiper H, Davies HV, Iserentant D, Hull R, Mezzetti B, Messens K, De Loose M et al..  2014.  DTREEv2, a computer-based support system for the risk assessment of genetically modified plants. New Biotechnology. 31:166-171.
Peter KA, Gildow FE, Palukaitis P, Gray SM.  2009.  The C-terminus of the Polerovirus P5 readthrough domain limits virus infection to the phloem. Journal of Virology. 83:5419-5429. Abstract
Peters JC, Harper G, Brierley JL, Lees AK, Wale SJ, Hilton A, Gladders P, Boonham N, Cunnington AC.  2016.  Factors influencing the development of black dot (Colletotrichum coccodes) on potato. Plant Pathology. 65:1484-1491.
Peters JC, Lees AK, Cullen DW, Sullivan L, Stroud GP, Cunnington AC.  2008.  Characterisation of Fusarium sp. responsible for causing dry rot of potato in Great Britain. Plant Pathology. 57:262-271. Abstract
Petridis A, van der Kaay J, Chrysanthou E, McCallum S, Graham J, Hancock RD.  2018.  Photosynthetic limitation as a factor influencing yield in highbush blueberries (Vaccinium corymbosum) in a northern European environment. Journal of Experimental Botany. 69:3069-3080.
Petridis A, van der Kaay J, Sungurtas J, Verrall SR, McCallum SR, Graham J, Hancock RD.  2020.  Photosynthetic plasticity allows blueberry (Vaccinium corymbosum L.) plants to compensate for yield loss under conditions of high sink demand. Environmental and Experimental Botany. 174:ArticleNo.104031.
Petridis A, van der Kaay J, Archibald IW, McCallum S, Graham J, Hancock R.  2021.  Reflective mulch increases fruit yield of highbush blueberry (Vaccinium corymbosum L. cv. Darrow) grown in a northern maritime environment while maintaining key fruit quality traits. Journal of the Science of Food and Agriculture. 101:3376-3385.
Petrillo E, Kalyna M, Mandadi KK, Tu SL, Simpson CG.  2020.  Editorial: Alternative splicing regulation in plants. Frontiers of Plant Science. 11:ArticleNo.913.
Petrillo E, Herz MAG, Fuchs A, Reifer D, Fuller J, Yanovsky MJ, Simpson C, Brown JWS, Barta A, Kalyna M et al..  2014.  A chloroplast retrograde signal regulates nuclear alternative splicing. Science. 344:427-430.
Pett TJ, Shwartz A, Irvine KN, Dallimer M, Davies ZG.  2016.  Unpacking the people - biodiversity paradox: a conceptual framework. Bioscience. 66:576-583.
Pettitt TR, Keane GJ, John SOL, Cooke DEL, Zerjav M.  2019.  Atypical late blight symptoms following first recorded infections by Phytophthora infestans genotype EU_39_A1 in UK vine tomatoes. New Disease Reports. 39:ArticleNo.16.
Pettorelli N, Katzner T, Gordon IJ, Garner T, Mock K, Redpath S, Gompper M.  2009.  Possible consequences of the Copenhagen climate change meeting for conservation of animals. Animal Conservation. 12(6):503-504.
Pettorelli N, Evans DM, Garner TWJ, Katzner T, Gompper ME, Altwegg R, Branch TA, Johnson JA, Acevedo-Whitehouse K, DaVolls L et al..  2013.  Addressing gender imbalances in animal conservation. Animal Conservation. 16:131-133.
Peukert S, Bol R, Roberts W, Macleod CJA, Murray PJ, Dixon ER, Brazier RE.  2013.  Understanding spatial variability of soil properties: a key step in establishing field- to farm-scale agro-ecosystem experiments (vol 26, pg 2413, 2012). (Correction). Rapid Communications in Mass Spectrometry. 27:284.
Peukert S, Griffith BA, Murray PJ, Macleod CJA, Brazier RE.  2014.  Intensive management in grasslands causes diffuse water pollution at the farm scale. Journal of Environmental Quality. 43:2009-2023.
Peukert S, Bol R, Roberts W, Macleod CJA, Murray PJ, Dixon ER, Brazier RE.  2012.  Understanding spatial variability of soil properties: a key step in establishing field- to farm-scale agro-ecosystem experiments. Rapid Communications in Mass Spectrometry. 26:2413-2421.
Peukert S, Griffith BA, Murray PJ, Macleod CJA, Brazier RE.  2016.  Spatial variation in soil properties and diffuse losses between and within grassland fields with similar short-term management. European Journal of Soil Science. 67:386-396.
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Phillip S, Dandy N, Gill R, MacMillan DC.  2009.  Is legislation a barrier to the sustainable management of game species? A case study of wild deer in Britain Journal of Environmental Planning and Management. 52(8):993-1012.
Phillip S, Hunter C, Blackstock KL.  2010.  A typology for defining agritourism. Tourism Management. 31(6):754-758.
Phillip S, MacMillan DC.  2008.  Car park charging in the Cairngorms National Park. Scottish Geographical Journal. 122(3):204-222.
Phillips D, Jenkins G, Macaulay M, Nibau C, Wnetrzak J, Fallding D, Colas I, Oakey H, Waugh R, Ramsay L.  2015.  The effect of temperature on the male and female recombination landscape of barley. New Phytologist. 208:421-429.
Phillips WS, Brown AMV, Howe DK, Peetz AB, Blok VC, Denver DR, Zasada IA.  2016.  The mitochondrial genome of Globodera ellingtonae is composed of two circles with segregated gene content and differential copy numbers. BMC Genomics. 17:ArticleNo.706..
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The James Hutton Research Institute is the result of the merger in April 2011 of MLURI and SCRI. This merger formed a new powerhouse for research into food, land use, and climate change.