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2013
Raven JA.  2013.  Cells inside cells: symbiosis and continuing phagotrophy. Current Biology. 23:R530-R531.
Munang R, Thiaw I, Alverson K, Mumba M, Liu J, Rivington M.  2013.  Climate change and ecosystem-based adaptation: a new pragmatic approach to buffering climate change impacts. Current Opinion in Environmental Sustainability. 5:67-71.
Rivington M, Matthews KB, Buchan K, Miller DG, Bellocchi G, Russell G.  2013.  Climate change impacts and adaptation scope for agriculture indicated by agro-meteorological metrics. Agricultural Systems. 114:15-31.
Chapman SJ, Bell JS, Campbell CD, Hudson G, Lilly A, Nolan AJ, Robertson AHJ, Potts JM, Towers W.  2013.  Comparison of soil carbon stocks in Scottish soils between 1978 and 2009. European Journal of Soil Science. 64:455-465.
Rhind SM, Kyle CE, Kerr C, Osprey M, Zhang ZL, Duff EI, Lilly A, Nolan A, Hudson G, Towers W et al..  2013.  Concentrations and geographic distribution of selected organic pollutants in Scottish surface soils. Environmental Pollution. 182:15-27.
Whitehead PG, Crossman J, Balana BB, Futter MN, Comber S, Jin L, Skuras D, Wade AJ, Bowes MJ, Read DS.  2013.  A cost-effectiveness analysis of water security and water quality: impacts of climate and land-use change on the River Thames system. Philosophical Transactions of the Royal Society, Series A. 371:201204B.
Reynolds B, Chamberlain PM, Poskitt J, Woods C, Scott WA, Rowe EC, Robinson DA, Frogbrook ZL, Keith AM, Henrys PA et al..  2013.  Countryside survey: National "Soil Change" 1978-2007 for topsoils in Great Britain - acidity, carbon, and total nitrogen status. Vadose Zone Journal. 12
Bartley PM, Katzer F, Rocchi MS, Maley SW, Benavides J, Nath M, Pang Y, Canton G, Thomson J, Chianini F et al..  2013.  Development of maternal and foetal immune responses in cattle following experimental challenge with Neospora caninum at day 210 of gestation. Veterinary Research. 44
Rushworth AM, Bowman AW, Brewer MJ, Langan SJ.  2013.  Distributed lag models for hydrological data. Biometrics. 69:537-544.
Andrews M, Raven JA, Lea PJ.  2013.  Do plants need nitrate? The mechanisms by which nitrogen form affects plants Annals of Applied Biology. 163:174-199.
Shand CA, Rosen K, Thored K, Wendler R, Hillier SJ.  2013.  Downward migration of radiocaesium in organic soils across a transect in Scotland. Journal of Environmental Radioactivity. 115:124-133.
Mehmood F, Rashid A, Mahmood T, Dawson LA.  2013.  Effect of DTPA on Cd solubility in soil - accumulation and subsequent toxicity to lettuce. Chemosphere. 90:1805-1810.
Cheema MUA, Rees D, Colgan RJ, Taylor M, Westby A.  2013.  The effects of ethylene, 1-MCP and AVG on sprouting in sweetpotato roots. Postharvest Biology and Technology. 85:89-93.
Knipe A, Fowler PA, Ramsay S, Haydon DT, McNeilly AS, Thirgood, S.J.; Redpath S, Newey S.  2013.  The effects of population density on the breeding performance of mountain hare Lepus timidus. Wildlife Biology. 19:473-482.
Lane N, Martin WF, Raven JA, Allen JF.  2013.  Energy, genes and evolution: introduction to an evolutionary synthesis. Philosophical Transactions of the Royal Society, B. 368:20120253.
Cameron DR, Van Oijen M, Werner C, Butterbach-Bahl K, Grote R, Haas E, Heuvelink GBM, Kiese R, Kros J, Kuhnert M et al..  2013.  Environmental change impacts on the C- and N-cycle of European forests: a model comparison study. Biogeosciences. 10:1751-1773.
Andersen MB, Vance D, Keech AR, Rickli J, Hudson G.  2013.  Estimating U fluxes in a high-latitude, boreal post-glacial setting using U-series isotopes in soils and rivers. Chemical Geology. 354:22-32.
Whybrow S, Ritz P, Horgan GW, Stubbs RJ.  2013.  An evaluation of the IDEEA (TM) activity monitor for estimating energy expenditure. British Journal of Nutrition. 109:173-183.
Raven JA.  2013.  The evolution of autotrophy in relation to phosphorus requirement. Journal of Experimental Botany. 64:4023-4046.
Espinosa M, Psaltopoulos D, Santini F, Phimister E, Roberts D, Mary S, Ratinger T, Skuras D, Balamou E, Cardenette M et al..  2013.  Ex-ante analysis of the regional impacts of the Common Agricultural Policy: a rural-urban recursive dynamic CGE model approach. European Planning Studies. Published online..
Villar N, Lambin X, Evans D, Pakeman RJ, Redpath S.  2013.  Experimental evidence that livestock grazing intensity affects the activity of a generalist predator. Acta Oecologia. 49:12-16.
King J, Armstead I, Harper J, Ramsey L, Snape J, Waugh R, James C, Thomas A, Gasior D, Kelly R et al..  2013.  Exploitation of interspecific diversity for monocot crop improvement. Heredity. 110:475-483.
Bellingham M, Amezaga MR, Mandon-Pepin B, Speers CJB, Kyle CE, Evans NP, Sharpe RM, Cotinot C, Rhind SM, Fowler PA.  2013.  Exposure to chemical cocktails before or after conception - the effect of timing on ovarian function. Molecular and Cellular Endocrinology. 376:156-172.
Roberts D, Majewski E, Sulewski P.  2013.  Farm household interactions with local economies: A comparison of two EU case study areas. Land Use Policy. 31:156-165.
Mitchell CA, Kalies S, Cizmar T, Heisterkamp A, Torrance L, Roberts AG, Gunn-Moore FJ, Dholakia K.  2013.  Femtosecond optoinjection of intact tobacco BY-2 cells using a reconfigurable photoporation platform. PLoS ONE. 8:e79235.
Getachew AM, Innocent G, Proudman CJ, Trawford A, Feseha G, Reid SWJ, Faith B, Love S.  2013.  Field efficacy of praziquantel oral paste against naturally acquired equine cestodes in Ethiopia. Parasitology Research. 112:141-146.
Fisk SP, Cuestas-Marcos A, Cistue L, Russell J, Smith KP, Baenziger S, Bedo Z, Corey A, Filichkin T, Karsai I et al..  2013.  FR-H3: a new QTL to assist in the development of fall-sown barley with superior low temperature tolerance. Theoretical and Applied Genetics. 126:335-347.
Alimi NA, Bink MCAM, Dieleman JA, Nicolai M, Wubs M, Heuvelink E, Magan J, Voorrips RE, Jansen J, Rodrigues PC et al..  2013.  Genetic and QTL analyses of yield and a set of physiological traits in pepper. Euphytica. 190:181-201.
Yannic G, Pellissier L, Ortego J, Lecomte N, Couturier S, Cuyler C, Dussault C, Hundertmark KJ, Irvine RJ, Jenkins DA et al..  2013.  Genetic diversity in caribou linked to past and future climate change. Nature Climate Change. 4:132-137.
Velmala SM, Rajala T, Haapanen M, Taylor AFS, Pennanen T.  2013.  Genetic host-tree effects on the ectomycorrhizal community and root characteristics of Norway spruce. Mycorrhiza. 23:21-33.
Visioni A, Tondelli A, Francia E, Pswarayi A, Malosetti M, Russell J, Thomas W, Waugh R, Pecchioni N, Romagosa I et al..  2013.  Genome-wide association mapping of frost tolerance in barley (Hordeum vulgare L.). BMC Genomics. 14:424.
Fowler D, Pyle JA, Raven JA, Sutton MA.  2013.  The global nitrogen cycle in the twenty-first century: introduction. Philosophical Transactions of the Royal Society, B. 368:ArticleNo.20130165..
Roe J, Ward Thompson C, Aspinall P, Brewer MJ, Duff EI, Miller DR, Mitchell R, Clow A.  2013.  Green space and stress: evidence from cortisol measures in deprived urban communities. International Journal of Environmental Research and Public Health.
Maffey G, Reed M, Irvine RJ, van der Wal R.  2013.  Habitat monitoring in the wider countryside: A case study on the pursuit of innovation in red deer management. Journal of Environmental Management. 128:779-786.
Reinsch S, Ambus P, Thornton B, Paterson E.  2013.  Impact of future climatic conditions on the potential for plant-mediated soil organic matter priming. Soil Biology and Biochemistry. 65:133-140.
Moynihan E, Richards K, Ritz K, Tyrrel S, Brennan FP.  2013.  The impact of soil type, biology and temperature on the environmental persistence of non-toxigenic E. coli O157. Biology and Environment: Proceedings of the Royal Irish Academy. 113B:41-46.
Nickbakhsh S, Matthews L, Dent JE, Innocent GT, Arnold ME, Reid SWJ, Kao RR.  2013.  Implications of within-farm transmission for network dynamics: Consequences for the spread of avian influenza. Epidemics. 5:67-76.
Brennan FP, Grant J, Botting C, O'Flaherty V, Richards K, Abram F.  2013.  Insights into the low temperature adaptation and nutritional flexibility of a soil persistent Escherichia coli. FEMS Microbiology Ecology. 84:75-85.
Longbottom D, Livingstone M, Maley S, van der Zon A, Rocchi M, Wilson K, Wheelhouse N, Dagleish M, Aitchison K, Wattegedera S et al..  2013.  Intranasal infection with Chlamydia abortus induces dose-dependent latency and abortion in sheep. PLoS ONE. 8:e57950.
Robinson D, Trinder CJ, Brooker RW.  2013.  Introduction to the special feature on mechanisms of plant competition. Functional Ecology. 27:831-832.
Gehlot HS, Tak N, Kaushik M, Mitra S, Chen WM, Poweleit N, Panwar D, Poonar N, Parihar R, Tak A et al..  2013.  An invasive Mimosa in India does not adopt the symbionts of its native relatives. Annals of Botany. 112:179-186.
Raven JA.  2013.  Iron acquisition and allocation in stramenopile algae. Journal of Experimental Botany. 64:2119-2127.
Fazey I, Evely AC, Reed MR, Stringer LC, Kruijsen JHJ, White PCL, Newsham A, Jin L, Cortazzi M, Phillipson J et al..  2013.  Knowledge Exchange: a review and research agenda for environmental management. Environmental Conservation. 40:19-36.
Reed MS, Fazey I, Stringer LC, Raymond CM, Akhtar-Schuster M, Begni G, Bigas H, Brehm S, Briggs J, Bryce R et al..  2013.  Knowledge management for land degradation monitoring and assessment: an analysis of contemporary thinking. Land Degradation and Development. 24:307-322.
Ribeiro KM, Braga RA, Scalco MS, Horgan GW.  2013.  Leaf area estimation of medium size plants using optical metrology. Revista Brasileira de Engenharia Agricola e Ambiental. 17:595-601.
Kapfer J, Birks HJB, Felde VA, Klanderud K, Martinessen T, Ross LC, Schei FH, Virtanen R, Grytnes JA.  2013.  Long-term vegetation stability in northern Europe as assessed by changes in species co-occurrences. Plant Ecology and Biodiversity. 6:289-302.
Andrade LP, Rhind SM, Rae MT, Kyle CE, Jowett J, Lea RG.  2013.  Maternal undernutrition does not alter Sertoli cell numbers or the expression of key developmental markers in the mid-gestation ovine fetal testis. Journal of Negative Results in BioMedicine. 12
Wishart J, George TS, Brown LK, Ramsay G, Bradshaw JE, White PJ, Gregory PJ.  2013.  Measuring variation in potato roots in both field and glasshouse: the search for useful yield predictors and a simple screen for root traits. Plant and Soil. 368:231-249.
Ricci P, Rooke JA, Nevison I, Waterhouse A.  2013.  Methane emissions from beef and dairy cattle: quantifying the effect of physiological stage and diet characteristics. Journal of Animal Science. 91:5379-5389.
van der Heijden GA, Legout A, Midwood AJ, Craig CA, Pollier B, Ranger J, Dambrine E.  2013.  Mg and Ca root uptake and vertical transfer in soils assessed by an in situ ecosystem scale multi-isotopic (26Mg & 44Ca) tracing experiment in a beech stand (Breuil-Chenue, France). Plant and Soil. 369:33-45.
Roberts WM, Matthews RA, Blackwell MSA, Peukert S, Collins AL, Stutter MI, Haygarth PM.  2013.  Microbial biomass phosphorus contributions to phosphorus solubility in riparian vegetated buffer strip soils. Biology and Fertility of Soils. 49:1237-1241.
Dungait JAJ, Ghee C, Rowan JS, McKenzie BM, Hawes C, Dixon ER, Paterson E, Hopkins DW.  2013.  Microbial responses to the erosional redistribution of soil organic carbon in arable fields. Soil Biology and Biochemistry. 60:195-201.
Smith SW, Robertson AHJ, Meharg AA, Pakeman RJ, Johnson D, Woodin SJ, van der Wal R.  2013.  Milling plant and soil material in plastic tubes over-estimates carbon and under-estimates nitrogen concentrations. Plant and Soil. 369:509-513.
Flynn KJ, Stoecker DK, Mitra A, Raven JA, Glibert PM, Hansen PJ, Graneli E, Burkholder JM.  2013.  Misuse of the phytoplanktonzooplankton dichotomy: the need to assign organisms as mixotrophs within plankton functional types. Journal of Plankton Research. 35:3-11.
Schmidt S, Raven JA, Paungfoo-Lonhienne C.  2013.  The mixotrophic nature of photosynthetic plants. Functional Plant Biology. 40:425-438.
Kragt ME, Robson BJ, Macleod CJA.  2013.  Modellers' roles in structuring integrative research projects. Environmental Modelling and Software. 39:322-330.
Robinson DA, Hockley N, Cooper DM, Emmett BA, Keith AM, Lebron I, Reynolds B, Tipping E, Tye AM, Watts CW et al..  2013.  Natural capital and ecosystem services, developing an appropriate soils framework as a basis for valuation. Soil Biology and Biochemistry. 57:1023-1033.
Rees RM, Baddeley JA, Bhogal A, Ball BC, Chadwick DR, MacLeod M, Lilly A, Pappa VA, Thorman RE, Watson CA et al..  2013.  Nitrous oxide mitigation in UK agriculture. Soil Science and Plant Nutrition.. 59:3-15.
Sukganah A, Choong CY, Russell J, Neale D, Wickneswari R.  2013.  Nucleotide sequence analysis of two lignin genes in Acacia auriculiformis x Acacia mangium hybrid for enhancement of wood pulp quality. Tree Genetics and Genome. 9:1369-1381.
Cocito S, Ferrier-Pages C, Cupido R, Rottier C, Meier-Augenstein W, Kemp HF, Reynaud S, Peirano A.  2013.  Nutrient acquisition in four Mediterranean gorgonian species. Marine Ecology Progress Series. 473:179-188.
Hillier S, Marwa E, Rice C.  2013.  On the mechanism of exfoliation of "Vermiculite". Clay Minerals. 48:563-582.
Fischer A, Sandstrom C, Delibes-Mateos M, Arroyo B, Tadie D, Randall D, Hailu F, Lowassa A, Mshua M, Kerezi V et al..  2013.  On the multifunctionality of hunting - an institutional analysis of eight cases from Europe and Africa. Journal of Environmental Planning and Management. 56:531-552.
Carvalho A, Ribeiro H, Mayes R, Guedes A, Abreu I, Noronha F, Dawson LA.  2013.  Organic matter characterization of sediments in two river beaches from Northern Portugal for forensic application. Forensic Science International. 233:403-415.
Chianini F, Siso S, Ricci E, Eaton SL, Finlayson J, Pang Y, Hamilton S, Steele P, Reid HW, Cantile C et al..  2013.  Pathogenesis of scrapie in ARQ/ARQ sheep after subcutaneous infection: Effect of lymphadenectomy and immune cell subset changes in relation to prion protein accumulation. Veterinary Immunology and Immunopathology. 152:348-358.
Martin-Ortega J, Ojea E, Roux C.  2013.  Payments for Water Ecosystem Services in Latin America: a literature review and conceptual model. Ecosystem Services. 6:122-132.
Suryawanshi KR, Bhatnagar YV, Redpath S, Mishra C.  2013.  People, predators and perceptions: patterns of livestock depredation by snow leopards and wolves. Journal of Applied Ecology. 50:550-560.
Hombach-Klonisch S, Danescu A, Begum F, Amezaga MR, Rhind SM, Sharpe RM, Evans NP, Bellingham M, Cotinot C, Mandon-Pepin B et al..  2013.  Peri-conceptional changes in maternal exposure to sewage sludge chemicals disturbs fetal thyroid gland development in sheep. Molecular and Cellular Endocrinology. 367:98-108.
Canton GJ, Katzer F, Benavides-Silvan J, Maley SW, Palarea-Albaladejo J, Pang Y, Smith S, Bartley PM, Rocchi M, Innes EA et al..  2013.  Phenotypic characterisation of the cellular immune infiltrate in placentas of cattle following experimental inoculation with Neospora caninum in late gestation. Veterinary Research. 44
Makarov V, Rakitina D, Protopopova A, Yaminsky I, Arutiunian A, Love AJ, Taliansky M, Kalinina N.  2013.  Plant coilin: structural characteristics and RNA-binding properties. PLoS ONE. 8:e53571.
Trinder CJ, Brooker RW, Robinson D.  2013.  Plant ecology's guilty little secret: understanding the dynamics of plant competition. Functional Ecology. 27:918-929.
Sainz M, Perez-Rontome C, Ramos J, Mulet J, James E, Bhattacharjee U, Petrich J, Becana M.  2013.  Plant hemoglobins can be maintained in functional form by reduced flavins in the nuclei and confer differential tolerance to nitro-oxidative stress. The Plant Journal. 76:875-887.
Raven JA.  2013.  Polar auxin transport in relation to long-distance transport of nutrients in the Charales. Journal of Experimental Botany. 64:1-9.
Ghee C, Neilson R, Hallett PD, Robinson D, Paterson E.  2013.  Priming of soil organic matter mineralisation is intrinsically insensitive to temperature. Soil Biology and Biochemistry. 66:20-28.
Phillips D, Wnetrzak J, Nibau C, Barakate A, Ramsay L, Wright F, Higgins JD, Perry RM, Jenkins G.  2013.  Quantitative high resolution mapping of HvMLH3 foci in barley pachytene nuclei reveals a strong distal bias and weak interference. Journal of Experimental Botany. 64:2139-2154.
Critchley CNR, Mitchell RJ, Rose RJ, Griffiths JB, Jackson E, Scott H, Davies OD.  2013.  Re-establishment of Calluna vulgaris (L.) Hull in an eight-year grazing experiment on upland acid grassland. Journal of Nature Conservation. 21:22-30.
Tilsner J, Linnik O, Louveaux M, Roberts IM, Chapman SN, Oparka KJ.  2013.  Replication and trafficking of a plant virus are coupled at the entrances of plasmodesmata. Journal of Cell Biology. 201:981-995.
Raven JA.  2013.  RNA function and phosphorus use by photosynthetic organisms. Frontiers in Plant Science, 4. Published online.. 4
Pasare SA, Ducreux LJM, Morris WL, Campbell R, Sharma SK, Roumeliotis E, Kohlen W, van der Krol S, Bramley PM, Roberts AG et al..  2013.  The role of the potato (Solanum tuberosum L.) CCD8 gene in stolon and tuber development. New Phytologist. 198:1108-1120.
Wang X, Richards J, Gross T, Druka A, Kleinhofs A, Steffenson B, Acevedo M, Brueggeman R.  2013.  The rpg4-mediated resistance to wheat stem rust (Puccinia graminis) in barley (Hordeum vulgare) requires Rpg5 gene, a second NBS-LRR gene, and an actin depolymerization factor. Molecular Plant-Microbe Interactions. 26:407-418.
Raven JA.  2013.  Rubisco: still the most abundant protein of Earth? New Phytologist. 198:1-3.
Rhind SM, Kyle CE, Ruffie H, Calmettes E, Osprey M, Zhang ZL, Hamilton D, McKenzie C.  2013.  Short and long term temporal changes in soil concentrations of selected endocrine disrupting compounds (EDCs) following single or multiple applications of sewage sludge to pastures. Environmental Pollution. 181:262-270.
Tondelli A, Xu X, Moragues M, Sharma R, Schnaithmann F, Ingvardsen C, Manninen O, Comadran J, Russell J, Waugh R et al..  2013.  Structural and temporal variation in genetic diversity of European spring two-row barley cultivars and association mapping of quantitative traits. Plant Genome. 6
Askarianzadeh A, Birch ANE, Ramsay G, Minaeimoghadam M.  2013.  Study of wild Solanum species to identify sources of resistance against the green peach aphid, Myzus persicae (Sulzer). American Journal of Potato Research.. 90:66-70.
Pasare S, Wright K, Campbell R, Morris WL, Ducreux LJM, Chapman S, Bramley PM, Fraser PD, Roberts AG, Taylor MA.  2013.  The sub-cellular localisation of the potato (Solanum tuberosum L.) carotenoid biosynthetic enzymes, CrtRb2 and PSY2. Protoplasma. 250:1381-1392.
O'Malley-James JT, Greaves JS, Raven JA, Cockell CS.  2013.  Swansong biospheres: refuges for life and novel microbial biospheres on terrestrial planets near the end of their habitable lifetimes. International Journal of Astrobiology. 12:99-112.
Rodriguez PA, Bos JIB.  2013.  Toward understanding the role of aphid effectors in plant infestation. Molecular Plant Microbe Interactions. 26:25-30.
Mosher S, Seybold H, Rodriguez PA, Stahl M, Davies KA, Davaratne S, Morillo SA, Wierzba M, Favery B, Keller H et al..  2013.  The tyrosine-sulfated peptide receptors PSKR1 and PST1R modify the immunity of Arabidopsis to biotrophic and necrotrophic pathogens in an antagonistic manner. The Plant Journal. 73:469-482.
Peukert S, Bol R, Roberts W, Macleod CJA, Murray PJ, Dixon ER, Brazier RE.  2013.  Understanding spatial variability of soil properties: a key step in establishing field- to farm-scale agro-ecosystem experiments (vol 26, pg 2413, 2012). (Correction). Rapid Communications in Mass Spectrometry. 27:284.
Davies AL, Bryce R, Redpath SM.  2013.  Use of multicriteria decision analysis to address conservation conflicts. Conservation Biology. 27:936-944.
Thuenemann EC, Lenzi P, Love AJ, Taliansky M, Becares M, Zuniga S, Enjuanes L, Zahmanova GG, Minkov IN, Matic S et al..  2013.  The use of transient expression systems for the rapid production of virus-like particles in plants. Current Pharmaceutical Design. 19:5564-5573.
Dawson IK, Guariguata MR, Loo J, Weber JC, Lengkeek A, Bush D, Cornelius J, Guarino L, Kindt R, Orwa C et al..  2013.  What is the relevance of smallholders' agroforestry systems for conserving tropical tree species and genetic diversity in circa situm, in situ and ex situ settings? A review Biodiversity and Conservation. 22:301-324.
2012
Sutherland LA, Gabriel D, Hathaway-Jenkins L, Pascual U, Schmutz U, Rigby D, Godwin R, Sait S, Sakrabani R, Kunin B et al..  2012.  The 'neighbourhood effect': a multidisciplinary assessment of the case for farmer co-ordination in agri-environmental programmes. Land Use Policy. 29:502-512.
Raven JA, Giordano M, Beardall J, Maberly SC.  2012.  Algal evolution in relation to atmospheric CO2: carboxylases, carbon-concentrating mechanisms and carbon oxidation cycles. Philosophical Transactions of the Royal Society, B. 367:493-507.
Spies A, Korzun V, Bayles R, Rajaraman J, Himmelback A, Hedley PE, Schweizer P.  2012.  Allele mining in barley genetic resources reveals genes of race-non-specific powdery mildew resistance. Frontiers in Plant Science. 2:113.
Rodriguez-Gutierrez G, Duthie GG, Wood S, Morrice P, Nicol F, Reid M, Cantlay LL, Kelder T, Horgan GW, Fernandez-Bolanos Guzman J et al..  2012.  Alperujo extract, hydroxytyrosol, and 3,4-dihydroxyphenylglycol are bioavailable and have antioxidant properties in vitamin e-deficient ratsua proteomics and network analysis approach. Molecular Nutrition and Food Research. 56:1131-1147.
Bingham IJ, Karley AJ, White PJ, Thomas WTB, Russell JR.  2012.  Analysis of improvements in nitrogen use efficiency associated with 75 years of spring barley breeding. European Journal of Agronomy. 42:49-58.
Rhind SM.  2012.  Anthropogenic pollutants - a insidious threat to animal health and productivity? Acta Veterinaria Scandinavica. 54:S2.
White PJ, Broadley MR, Hammond JP, Ramsay G, Subramanian NK, Thompson JA, Wright GM.  2012.  Bio-fortification of potato tubers using foliar zinc-fertiliser. Journal of Horticultural Science and Biotechnology. 87:123-129.
Subbarao GV, Sahrawat KL, Nakahara K, Ishikawa T, Rao GP, Hash CT, George TS, Kishii M, Rao PS, Nardi P et al..  2012.  Biological nitrification inhibition (BNI) - a novel strategy to regulate nitrification in agricultural systems. Advances in Agronomy. 114:249-302.
Ross L, Woodin S, Hester AJ, Thompson DBA, Birks HJ.  2012.  Biotic homogenization of upland vegetation: patterns and drivers at multiple spatial scales over five decades. Journal of Vegetation Science. 23:755-770.
Logie L, Harthill J, Patel K, Bacon S, Hamilton DL, Macrae K, McDougall GJ, Wang HH, Xue L, Jiang H et al..  2012.  Cellular responses to the metal-binding properties of metformin. Diabetes. 61:1423-1433.
Flynn KJ, Blackford JC, Baird ME, Raven JA, Clark DR, Beardall J, Brownlee C, Fabian H, Wheeler GL.  2012.  Changes in pH at the exterior surface of plankton with ocean acidification. Nature Climate Change. 2:510-513.
Roberts AMI.  2012.  Comparison of regression methods for phenology. International Journal of Biometeorology. 56:707-717.
Langkilde S, Schroder M, Frank T, Shepherd LVT, Conner S, Davies HV, Meyer O, Danier J, Rychlik M, Belknap WR et al..  2012.  Compositional and toxicological analysis of a GM potato line with reduced alpha-solanine content - A 90-day feeding study in the Syrian Golden hamster. Food and Chemical Toxicology. 64:177-185.
Vergara P, Mougeot F, Martinez-Padilla, J.; Millan J, Leckie F, Redpath SM.  2012.  The condition dependence of a secondary sexual trait is stronger under high parasite infection level. Behavioural Ecology. 23:502-511.
Stien A, Ims RA, Albon SD, Fuglei E, Irvine RJ, Ropstad E, Halvorsen O, Langvatn R, Loe LE, Veiberg V et al..  2012.  Congruent responses to weather variability in high arctic herbivores. Biology Letters. 8:1002-1005.
Perkins DM, Yvon-Durocher G, Demars BOL, Reiss J, Pichler DE, Friberg N, Trimmer M, Woodward G.  2012.  Consistent temperature dependence of respiration across ecosystems contrasting in thermal history. Global Change Biology. 18:1300-1311.
Walters DR, Avrova A, Bingham IJ, Burnett FJ, Fountaine J, Havis ND, Hoad SP, Hughes G, Looseley M, Oxley SJP et al..  2012.  Control of foliar diseases in barley: towards an integrated approach. European Journal of Plant Pathology. 133:33-73.
Deffuant G, Alvarez I, Barreteau O, de Vries B, Edmonds B, Gilbert N, Gotts N, Jabot F, Janssen S, Hilden M et al..  2012.  Data and models for exploring sustainability of human well-being in global environmental change. European Physical Journal Special Topics.. 214:519-545.
McCallum S, Woodhead M, Jorgensen L, Gordon SL, Brennan RM, Graham J, Hackett CA, Rowland LJ, Hancock JF, Olmstead JW et al..  2012.  Developing tools for long term breeding of blueberry germplasm for UK production. International Journal of Fruit Science. 12:294-303.
George D, Rind FC, Bendall MW, Taylor MA, Gatehouse AMR.  2012.  Developmental studies of transgenic maize expressing Cry1Ab on the African stem borer, Busseola fusca; effects on midgut cellular structure. Pest Management Science. 68:330-339.
Roberts DM, Schofield P, Donn S, Daniell TJ.  2012.  Directed terminal restriction analysis tool (DRAT): an aid to enzyme selection for directed terminal restriction fragment length polymorphisms. Methods in Ecology and Evolution. 3:24-28.
Rios JJ, Ó Lochlainn S, Devonshire J, Graham NS, Hammond JP, King GJ, White PJ, Kurup S, Broadley MR.  2012.  Distribution of calcium (Ca) and magnesium (Mg) in the leaves of Brassica rapa under varying exogenous Ca and Mg supply. Annals of Botany. 109:1081-1089.
Trinder C, Brooker R, Davidson H, Robinson D.  2012.  Dynamic trajectories of growth and nitrogen capture by competing plants. New Phytologist. 193:948-958.
Lockyer AE, Emery AM, Kane RA, Walker AJ, Mayer CD, Mitta G, Coustau C, Adema CM, Hanelt B, Rollinson D et al..  2012.  Early differential gene expression in haemocytes from resistant and susceptible biomphalaria glabrata strains in response to schistosoma mansoni. PLoS ONE, e511020. 7
Mesa-Jurado MA, Martin-Ortega J, Ruto E, Berbel J.  2012.  The economic value of guaranteed water supply for irrigation under scarcity conditions. Agricultural Water Management. 113:10-18.
Raven JA, Hurd CL.  2012.  Ecophysiology of photosynthesis in macroalgae. Photosynthesis Research. 113:105-125.
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Pocar P, Fiandanese N, Secchi C, Berrini A, Fischer B, Schmidt JS, Schaedlich K, Rhind SM, Zhang Z, Borromeo V.  2012.  Effects of polychlorinated biphenyls in CD-1 mice: reproductive toxicity and intergenerational transmission. Toxicological Sciences. 126:213-226.
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Raven JA, Crawfurd K.  2012.  Environmental controls on coccolithophore calcification. Marine Ecology Progress Series. 470:137-166.
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Getachew AM, Innocent G, Proudman CJ, Trawford A, Feseha G, Reid SWJ, Love S.  2012.  Equine cestodosis: a sero-epidemiological study of Anoplocephala perfoliata infection in Ethiopia. Veterinary Research Communication. 36:93-98.
Minet E, Coxon CE, Goodhue R, Richards KG, Kalin RM, Meier-Augenstein W.  2012.  Evaluating the utility of N-15 and O-18 isotope abundance analyses to identify nitrate sources: a soil zone study. Water Research. 46:3723-3736.
Ferreira LMM, Celaya R, Santos AS, Guedes CMV, Rodrigues MAM, Mayes RW, Osoro K.  2012.  Evaluation of long-chain alcohols as diet composition markers in goats grazing heathland areas. Animal. 6:683-0692.
Vetukuri RR, Asman AKM, Tellgren-Roth C, Jahan SN, Reimegard J, Fogelqvist J, Savenkov E, Soderbom F, Avrova AO, Whisson SC et al..  2012.  Evidence for small RNAs homologous to effector-encoding genes and transposable elements in the oomycete Phytophthora infestans. PLoS One.. 7:e51399-e51399.
Meharg AA, Edwards KJ, Schofield JE, Raab A, Feldmann J, Moran A, Bryant CL, Thornton B, Dawson JJC.  2012.  First comprehensive peat depositional records for tin, lead and copper associated with the antiquity of Europe’s largest cassiterite deposits. Journal of Archaeological Science. 39:717-727.
Bellingham M, McKinnell C, Fowler PA, Amezaga MR, Zhang Z, Rhind SM, Cotinot C, Mandon-Pepin B, Evans NP, Sharpe RM.  2012.  Foetal and post-natal exposure of sheep to sewage sludge chemicals disrupts sperm production in adulthood in a subset of animals. International Journal of Andrology. 35:317-329.
Getachew AM, Innocent G, Trawford AF, Reid SWJ, Love S.  2012.  Gasterophilosis: a major cause of rectal prolapse in working donkeys in Ethiopia. Tropical Animal Health and Production. 44:757-762.
Rowland LJ, Bell D, Alkharouf N, Bassil N, Drummond F, Beers L, Buck E, Finn C, Graham J, McCallum S et al..  2012.  Generating genomic tools for blueberry improvement. International Journal of Fruit Science. 12:276-287.
Farre A, Cuadrado A, Lacasa-Benito I, Cistue L, Schubert I, Comadran J, Jansen J, Romagosa I.  2012.  Genetic characterization of a reciprocal translocation present in a widely grown barley variety. Molecular Breeding. 30:1109-1119.
Jing R, Ambrose MA, Knox MR, Smykal P, Hybl M, Ramos A, Caminero C, Burstin J, Duc G, van Soest LJM et al..  2012.  Genetic diversity in European Pisum germplasm collections. Theoretical and Applied Genetics. 125:367-380.
Cooke DEL, Cano LM, Raffaele S, Bain RA, Cooke LR, Etherington GJ, Deahl KL, Farrer RA, Gilroy EM, Goss EM et al..  2012.  Genome analyses of an aggressive and invasive lineage of the Irish potato famine pathogen. PLoS Pathogens. 8:e1002940.
Lamour KH, Mudge J, Gobena D, Hurtado-Gonzales OP, Schmutz J, Kuo A, Miller NA, Rice BJ, Raffaele S, Cano LM et al..  2012.  Genome sequencing and mapping reveal loss of heterozygosity as a mechanism for rapid adaptation in the vegetable pathogen phytophthora capsici. Molecular Plant-Microbe Interactions. 25:1350-1360.
Rio-Alvarez I, Rodriguez-Herva JJ, Cuartas-Lanza R, Toth IK, Pritchard L, Rodriguez-Palenzuela P, Lopez-Solanilla E.  2012.  Genome-wide analysis of the response of Dickeya dadantii 3937 to plant antimicrobial peptides. Molecular Plant-Microbe Interactions. 25:523-533.
Wang M, Jiang N, Jia T, Leach L, Cockram J, Waugh R, Ramsay L, Thomas WTB, Luo Z.  2012.  Genome-wide association mapping of agronomic and morphologic traits in highly structured populations of barley cultivars. Theoretical and Applied Genetics. 124:233-246.
Limpens J, Granath G, Aerts R, Heijmans MMPD, Sheppard LJ, Bragazza L, Williams BL, Rydin H, Bubier J, Moore T et al..  2012.  Glasshouse vs field experiments: do they yield ecologically similar results for assessing N impacts on peat mosses? New Phytologist. 195:408-418.
Benavides J, Katzer F, Maley SW, Bartley PM, Canton G, Palarea-Albaladejo J, Purslow CA, Pang Y, Rocchi MS, Chianini F et al..  2012.  High rate of transplacental infection and transmission of Neospora caninum following experimental challenge of cattle at day 210 of gestation. Veterinary Research. 43:83.
Russell GC, Benavides J, Grant DM, Todd H, Thomson J, Puri V, Nath M, Haig DM.  2012.  Host gene expression changes in cattle infected with Alcelaphine herpesvirus 1. Virus Research. 169:246-254.
Rezanezhad F, Andersen R, Pouliot R, Price JS, Rochefort L, Graf MD.  2012.  How fen vegetation structure affects the transport of oil sands process-affected waters. Wetlands. 32:557-570.
Fowler PA, Bellingham M, Sinclair KD, Evans NP, Pocar P, Fischer B, Schaedlich K, Schmidt JS, Amazegal MR, Bhattacharya S et al..  2012.  Impact of endocrine-disrupting compounds (EDCs) on female reproductive health. Molecular and Cellular Endocrinology. 355:231-239.
McLaggan D, Amezaga MR, Petra E, Frost A, Duff EI, Rhind SM, Fowler PA, Glover LA, Lagido C.  2012.  Impact of sublethal levels of environmental pollutants found in sewage sludge on a novel Caenorhabditis elegans model biosensor. PLoS ONE. 7:e46503.
Daniell TJ, Davidson J, Alexander CJ, Caul S, Roberts D.  2012.  Improved real-time PCR estimation of gene copy number in soil extracts using an artificial reference. Journal of Microbiological Methods. 91:38-44.
Vanga BR, Butler RC, Toth IK, Ronson CW, Pitman AR.  2012.  Inactivation of PbTopo III beta causes hyper-excision of the Pathogenicity Island HAI2 resulting in reduced virulence of Pectobacterium atrosepticum. Molecular Microbiology. 84:648-663.
Leonardi G, Vahter M, Clemens F, Goessler W, Gurzau E, Hemminiki K, Hough RL, Koppova K, Kumar R, Rudnai P et al..  2012.  Inorganic arsenic and basal cell carcinoma in areas of Hungary, Romania, and Slovakia: A case-control study. Environmental Health Perspectives. 120:721-726.
Rungapamestry V, McMonagle J, Reynolds C, Rucklidge G, Reid M, Duncan G, Ross K, Horgan GW, Toomey S, Moloney AP et al..  2012.  Inter-organ proteomic analysis reveals insights into the molecular mechanisms underlying the anti-diabetic effects of cis-9, trans-11-conjugated linoleic acid in ob/ob mice. Journal of Fruit Science. 12:461-476.
Stott AW, Ahmadi BV, Dwyer CM, Kupiec B, Morgan-Davies C, Milne CE, Ringrose S, Goddard P, Phillips K, Waterhouse A.  2012.  Interactions between profit and welfare on extensive sheep farms. Animal Welfare. 21:57-64.
Lapierre H, Holtrop G, Calder AG, Renaud J, Lobley GE.  2012.  Is D-methionine bioavailable to the dairy cow? Journal of Dairy Science. 95:353-362.
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Hossain MS, Liao JQ, James EK, Sato S, Tabata S, Jurkiewicz A, Madsen LH, Stougaard J, Ross L, Szczyglowski K.  2012.  Lotus japonicus ARPC1 is required for rhizobial infection. Plant Physiology. 160:917-928.
Stephenson T, Reid E, Avery LM, Jefferson B.  2012.  Media surface properties and the development of nitrifying biofilms in mixed cultures for wastewater treatment. Process Safety and Environmental Protection. Published online. 91:321-324.
Frank T, Rohlig RM, Davies HV, Barros E, Engel K.  2012.  Metabolite profiling of maize kernels - genetic modification versus environmental influence. Journal of Agricultural and Food Chemistry. 60:3005-3012.
Ward Thompson C, Roe J, Aspinall P, Mitchell R, Clow A, Miller DR.  2012.  More green space is linked to less stress in deprived communities: evidence from salivary cortisol patterns. Landscape and Urban Planning. 105:221-229.
Semashko MA, Rakitina DV, Gonzalez I, Canto T, Kalinina N, Taliansky ME.  2012.  Movement protein of hordeivirus interacts in vitro and in vivo with coilin, a major structural protein of Cajal bodies. Doklady Biochemistry and Biophysics. 442:57-60.
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Fonseca MB, Peix A, de Faria SM, Mateos PF, Rivera LP, Simoes-Araujo JL, Franca MGC, dos Santos Isias RM, Cruz C, Velazquez E et al..  2012.  Nodulation in Dimorphandra wilsonii Rizz. (Caesalpinioideae), a threatened species native to the Brazilian Cerrado. PLoS ONE. 7:e49520.
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Chase-Topping ME, Rosser T, Allison LJ, Courcier, Evans J, McKendrick IJ, Pearce MC, Handel I, Caprioli A, Karch H et al..  2012.  Pathogenic potential to humans of bovine Escherichia coli O26, Scotland. Emerging Infectious Diseases. 18:439-448.
Brown EM, McDougall GJ, Stewart D, Pereira Caro G, Gonzalez-Barrio R, Allsopp P, Magee P, Crozier A, Rowland I, Gill CIR.  2012.  Persistence of anticancer activity in berry extracts after simulated gastrointestinal digestion and colonic fermentation. PLoS ONE. 7:e49740.
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Cowan GH, Roberts AG, Chapman SN, Ziegler A, Savenkov EI, Torrance L.  2012.  The potato mop-top virus TGB2 protein and viral RNA associate with chloroplasts and viral infection induces inclusions in the plastids. Frontiers in Plant Science. 3
Gao W, Ren T, Bengough AG, Auneau L, Watts CW, Whalley WR.  2012.  Predicting penetrometer resistance from the compression characteristic of soil. Soil Science Society of America Journal. 76:361-369.
Bragg JG, Quigg A, Raven JA, Wagner A.  2012.  Protein elemental sparing and codon usage bias are correlated among bacteria. Molecular Ecology. 21:2480-2487.
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Ryan CM, Hill T, Woollen E, Ghee C, Mitchard E, Cassells G, Grace J, Woodhouse IH, Williams M.  2012.  Quantifying small-scale deforestation and forest degradation in African woodlands using radar imagery. Global Change Biology. 18:243-257.
Denwood MJ, Love S, Innocent GT, Matthews L, McKendrick IJ, Hillary N, Smith A, Reid SWJ.  2012.  Quantifying the sources of variability in equine faecal egg counts: implications for improving the utility of the method. Veterinary Parasitology. 188:120-126.
Stutter MI, Shand CA, George TS, Blackwell MSA, Bol R, Mackay RL, Richardson AE, Condron LM, Turner BL, Haygrath PM.  2012.  Recovering phosphorus from soil - A root solution? Environmental Science and Technology. 46:1977-1978.
Engelhardt S, Boevink PC, Armstrong MR, Ramos M, Hein I, Birch PRJ.  2012.  Relocalization of late blight resistance protein R3a to endosomal compartments is associated with effector recognition and required for the immune response. The Plant Cell. 24:5142-5158.
Dahlin AS, Edwards AC, Lindstrom BEM, Ramezanian A, Shand CA, Walker RL, Watson CA, Oborn I.  2012.  Revisiting herbage sample collection and preparation procedures to minimise risks of trace element contamination. European Journal of Agronomy. 43:33-39.
Tan HW, Weir BS, Carter N, Heenan PB, Ridgway HJ, James EK, Sprent JI, Young JPW, Andrews M.  2012.  Rhizobia with 16S rRNA and nifH similar to Mesorhizobium huakuii but Novel recA, glnII, nodA and nodC genes are symbionts of New Zealand Carmichaelinae. PLoS ONE, e47677. 7
Cole LJ, Brocklehurst S, McCracken DI, Harrison W, Robertson D.  2012.  Riparian field margins: their potential to enhance biodiversity in intensively managed grasslands. Insect Conservation and Diversity. 5:86-94.
Hough RL, Booth P, Avery LM, Rhind SM, Crews C, Bacon J, Campbell CD, Tompkins D.  2012.  Risk assessment of the use of PAS100 green composts in sheep and cattle production in Scotland. Waste Management. 32:117-130.
Bradford RA, O'Sullivan JJ, van der Craats IM, Krywkow J, Rotko P, Bonaiuto M, Waylen K, Schelfaut K.  2012.  Risk perception - Issues for flood management in Europe. Natural Hazards and Earth System Sciences. 12:2299-2309.
Gonzalez I, Rakitina DV, Semashko MA, Taliansky ME, Praveen S, Palukaitis P, Carr JP, Kalinina N, Canto T.  2012.  RNA binding is more critical to the suppression of silencing function of Cucumber mosaic virus 2b protein than nuclear localization. RNA. 18:771-782.
Charkowski A, Blanco C, Condemine G, Expert D, Franza T, Hayes C, Hugouvieux-Cotte-Pattat N, Lopez Solanilla E, Low D, Moleleki L et al..  2012.  The role of secretion systems and small molecules in soft-rot enterobacteriaceae pathogenicity. Annual Review of Phytopathology. 50:425-449.
Graham SL, Millard P, Hunt JE, Rogers GND, Whitehead D.  2012.  Roots affect the response of heterotrophic soil respiration to temperature in tussock grass microcosms. Annals of Botany. 110:253-258.
Ibarra JT, Galvez N, Gimona A, Altamirano TA, Rojas I, Hester AJ, Laker AJ, Bonacic C.  2012.  Rufous-legged owl (Strix rufipes) and Austral pygmy owl (Glaucidium nanum) stand use in a gradient of disrupted and old growth Andean temperate forests, Chile. Studies on Neotropical Fauna and Environment. 47:33-40.
Dennis PG, Rushton SP, Laudicina VA, Daniell TJ, Ord V, Newsham KK, O'Donnell AG, Hopkins DW.  2012.  Soil fungal community composition does not alter along a latitudinal gradient through the maritime and sub-Antarctic. Fungal Ecology. 5:403-408.
Higgins JD, Perry RM, Barakate A, Ramsay L, Waugh R, Halpin C, Armstrong SJ, Franklin FCH.  2012.  Spatiotemporal asymmetry of the meiotic program underlies the predominantly distal distribution of meiotic crossovers in barley. Plant Cell. 24:4096-4109.
Deeks MJ, Calcutt JR, Ingle EKS, Hawkins TJ, Chapman SN, Richardson AC, Mentlak DA, Dixon MR, Cartwright F, Smertenko AP et al..  2012.  A superfamily of actin-binding proteins at the actin-membrane nexus of higher plants. Current Biology. 22:1595-1600.
Burgess CGS, Bartley Y, Redman E, Skuce PJ, Nath M, Whitelaw F, Tait A, Gilleard JS, Jackson F.  2012.  A survey of the trichostrongylid nematode species present on UK sheep farms and associated anthelmintic control practices. Veterinary Parasitology. 189:299-307.

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The James Hutton Research Institute is the result of the merger in April 2011 of MLURI and SCRI. This merger formed a new powerhouse for research into food, land use, and climate change.