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2007
Singh BK, Munro S, Potts JM, Millard P.  2007.  Influence of grass species and soil type on rhizosphere microbial community structure in grassland soils. Applied Soil Ecology. 36:147-155. Abstract
Sales J, Vali L, Hoyle DV, Yates CM, Amyes SGB, McKendrick IJ.  2007.  The interaction between dam methylation sites and Xha1 restriction digest sites in Escherichia coli O157: H7 EDL933. Journal of Applied Microbiology. 102:820-825. Abstract
Rommens CM, Haring MA, Swords K, Davies HV, Belknap WR.  2007.  The intragenic approach as a new extension to traditional plant breeding. Trends in Plant Science. 12:397-403. Abstract
Gilroy EM, Hein I, van der Hoorn R, Boevink P, Venter E, McLellan H, Kaffarnik F, Hrubikova K, Shaw J, Holeva MC et al..  2007.  Involvement of cathepsin B in the plant disease resistance hypersensitive response. Plant Journal. 52:1-13. Abstract
Andrews M, Raven JA, Sprent JI, Lea PJ.  2007.  Is shoot growth correlated to leaf protein concentration? Trends in Plant Science. 12:531-532. Abstract
Mickovski SB, Bengough AG, Bransby MF, Davies MCR, Hallett PD, Sonnenberg R.  2007.  Material stiffness, branching pattern, and soil water matric potential affect the pullout resistance of model root systems. European Journal of Soil Science. 58:1471-1481. Abstract
Stewart D, McDougall GJ, Sungurtas J, Verrall SR, Graham J, Martinussen I.  2007.  Metabolomic approach to identifying bioactive compounds in berries: Advances toward fruit nutritional enhancement. Molecular Nutrition and Food Research. 51:645-651. Abstract
Chaerle L, Leinonen I, Jones HG, van der Straeten D.  2007.  Monitoring and screening plant populations with combined thermal and chlorophyll fluorescence imaging. Journal of Experimental Botany. 58:773-784. Abstract
Caumette G, Ouypornkochagorn S, Scrimgeour CM, Raab A, Feldmann J.  2007.  Monitoring the arsenic and iodine exposure of seaweed-eating North Ronaldsay sheep from the gestational and suckling periods to adulthood by using horns as a dietary archive. Environmental Science & Technology. 41:2673-2679. Abstract
Matheson LA, Loren A, Hanton SL, Rossi M, Latijnhouwers M, Stefano G, Renna L, Brandizzi F.  2007.  Multiple roles of ADP-ribosylation factor 1 in plant cells include spatially regulated recruitment of coatomer and elements of the golgi matrix. Plant Physiology. 143:1615-1627.
Wilson MR, Foucaud L, Barlwo PG, Hutchison GR, Sales J, Simpson RJ, Stone V.  2007.  Nanoparticle interactions with zinc and iron: Implications for toxicology and inflammation. Toxicology and Applied Pharmacology. 225:80-89. Abstract
Stamati K, Hollingsworth PM, Russell JR.  2007.  Patterns of clonal diversity in three species of sub-arctic willow (Salix lanata, Salix lapponum and Salix herbacea). Plant Systematics and Evolution. 269:75-88. Abstract
Carfrae JA, Sheppard LJ, Raven JA, Leith ID, Crossley A.  2007.  Potassium and phosphorus additions modify the response of Sphagnum capillifolium growing on a Scottish ombrotrophic bog to enhanced nitrogen deposition. Applied Geochemistry. 22:1111-1121. Abstract
McCue KF, Allen PV, Shepherd LVT, Blake A, Maccree MM, Rockhold DR, Novy RG, Stewart D, Davies HV, Belknap WR.  2007.  Potato glycosterol rhamnosyltransferase, the terminal step in triose side-chain biosynthesis. Phytochemistry. 68:327-334. Abstract
Shepherd T, Dobson G, Verrall SR, Conner S, Griffiths DW, McNicol JW, Davies HV, Stewart D.  2007.  Potato metabolomics by GC-MS: what are the limiting factors? Metabolomics. 3:475-488. Abstract
Szili-Kovacs T, Torok K, Tilston EL, Hopkins DW.  2007.  Promoting microbial immobilization of soil nitrogen during restoration of abandoned agricultural fields by organic additions. Biology and Fertility of Soils. 43:823-828.
Molina-Cano J-L, Moralejo MA, Elia M, Mu P, Russell JR, P AM, Ciudad F, Swanston JS.  2007.  QTL analysis of a cross between European and North American malting barleys reveals a putative candidate gene for . Molecular Breeding. 19:275-284. Abstract
Scott D, Welch D, van der Wal R, Elston DA.  2007.  Response of the moss Racomitrium lanuginosum to changes in sheep grazing and snow-lie due to a snow-fence. Applied Vegetation Science. 10:229-238. Abstract
Krogh PH, Griffiths BS, Demsar D, Bohanec M, Debeljak M, Andersen MN, Sausse C, Birch ANE, Caul S, Holmstrup M et al..  2007.  Responses by earthworms to reduced tillage in herbicide tolerant maize and Bt maize cropping systems. Pedobiologia. 51:219-227. Abstract
Poulsen M, Schroder M, Wilcks A, Kroghsbo S, Lindecrona RH, Miller A, Frenzel T, Danier J, Rychlik M, Shu QY et al..  2007.  Safety testing of GM-rice expressing PHA-E lectin using a new animal test design. Food and Chemical Toxicology. 45:364-377. Abstract
Mitchell A, Oommen M, Bhatia P, Scott P, Robertson ZC, Stewart D, McDougall GJ, Wallace HM.  2007.  Scottish berries - potential for dietary chemoprevention? Scottish Medical Journal. 52:54-54. Abstract
Begg GS, Cullen DW, Iannetta PPM, Squire GR.  2007.  Sources of uncertainty in the quantification of genetically modified oilseed rape contamination in seed lots. Transgenic Research. 16:51-63. Abstract
Krivtsov V, Garside A, Brendler A, Liddell K, Griffiths BS, Staines HJ.  2007.  A study of population numbers and ecological interactions of soil and forest floor microfauna. Animal Biology. 57:467-484. Abstract
Stoll M, Jones HG.  2007.  Thermal imaging as a viable tool for monitoring plant stress. Journal International des Sciences de la Vigne et du Vin. 41:77-84.
Harrison SM, Monahan FJ, Zazzo A, Bahar B, Moloney AP, Scrimgeour CM, Schmidt O.  2007.  Three-dimensional growth of bovine hoof as recorded by carbon stable isotope ratios. Rapid Communications in Mass Spectrometry. 21:3971-3976. Abstract
Cooke DEL, Schena L, Cacciola SO.  2007.  Tools to detect, identify and monitor Phytophthora species in natural ecosystems. Journal of Plant Pathology. 89:13-28. Abstract
Sabot F, Hua-Van A, Bennetzen JL, Capy P, Chalhoub B, Flavell AJ, Leroy P, Morgante M, Panaud O, Paux E et al..  2007.  A unified classification system for eukaryotic transposable elements. Nature Reviews Genetics. 8:973-982. Abstract
Harrison SM, Zazzo A, Bahar B, Monahan FJ, Moloney AP, Scrimgeour CM, Schmidt O.  2007.  Using hooves for high-resolution isotopic reconstruction of bovine dietary history. Rapid Communications in Mass Spectrometry. 21:479-486. Abstract
Iannetta PPM, Begg GS, Hawes C, Young MW, Russell JR, Squire GR.  2007.  Variation in Capsella (shepherd's purse): an example of intraspecific functional diversity. Physiologia Plantarum. 129:542-554. Abstract
Griffiths BS, Heckmann LH, Caul S, Thompson J, Scrimgeour CM, Krogh PH.  2007.  Varietal effects of eight paired lines of transgenic Bt maize and near-isogenic non-Bt maize on soil microbial and nematode community structure. Plant Biotechnology Journal. 5:60-68. Abstract
Loe LE, Bonenfant C, Mysterud A, Severinsen T, Oritsland N, Langvatn R, Stien A, Irvine RJ, Stenseth N.  2007.  Activity pattern of arctic reindeer in a predator-free environment - no need to keep a daily rhythm. Oecologia. 152(4):617-624.
Gautrais J, Michelena P, Sibbald A, Deneubourg JL.  2007.  Allelomimetic synchronisation in merino sheep. Animal Behaviour. 74(5):1443-1454.
Wright AJ, Soto NA, Baldwin AL, Bateson M, Beale CM, Clark C, Deak T, Edwards EF, Fernandez A, Godinho A et al..  2007.  Anthropogenic noise as a stressor in animals: a multidisciplinary perspective. International Journal of Comparative Psychology. 20:250-273.
Johnston SL, Souter DM, Erwin SS, Tolkamp BJ, Yearsley JM, Gordon IJ, Illius AW, Kyriazakis I, Speakman JR.  2007.  Associations between basal metabolic rate and reproductive performance in C57BL/6J mice. Journal of Experimental Biology. 210(1):65-74.
Singh BK, Tate KR.  2007.  Biochemical and molecular characterisation of methanotrophs in soil from a pristine New Zealand beech forest. FEMS Microbiology Letters. 275(1):89-97.
Bradford MA, Tordoff GM, Black HIJ, Cook R, Eggers T, Garnett MH, Grayston SJ, Hutcheson KA, Ineson P, Newington JE et al..  2007.  Carbon dynamics in a model grassland with functionally different soil communities. Functional Ecology. 21(4):690-697.
Gundelwein A, Muller-Lupp T, Sommerkorn M, Haupt ETK, Pfeiffer EM, Wiechmann H.  2007.  Carbon in tundra soils in the Lake Labaz region of arctic Siberia. European Journal of Soil Science. 58(5):1164-1174.
Artz RRE, Anderson IC, Chapman SJ, Hagn A, Schloter M, Potts JM, Campbell CD.  2007.  Changes in fungal community composition in response to vegetational succession during the natural regeneration of cutover peatlands. Microbial Ecology. 54(3):508-522.
Belzunce-Segarra MJ, Szefer P, Wilson MJ, Bacon J, Bolalek J.  2007.  Chemical forms and distribution of heavy metals in core sediments from the Gdansk Basin, Baltic Sea. Polish Journal of Environmental Studies. 16:505-515.
Sullivan PF, Sommerkorn M, Rueth HM, Nadelhoffer KJ, Shaver GR, Welker JM.  2007.  Climate and species affect fine root production with long-term fertilization in acidic tussock tundra near Toolik Lake, Alaska. Oecologia. 153(3):643-652.
Smith P, Chapman SJ, Scott WA, Black HIJ, Wattenbach M, Milne R, Campbell CD, Lilly A, Ostle N, Levey P et al..  2007.  Climate change cannot be entirely responsible for soil carbon loss observed in England and Wales, 1978-2003. Global Change Biology. 13(12):2605-2609.
Robinson DT, Brown DG, Parker DC, Schreinemachers P, Janssen MA, Huigen M, Wittmer H, Gotts NM, Promburom P, Irwin E et al..  2007.  Comparison of empirical methods for building agent-based models in land use science. Journal of Land Use Science. 2(1):31-55.
Tetzlaff D, Soulsby C, Waldron S, Malcolm BDIAPJS, Lilly A, Youngson AF.  2007.  Conceptualisation of runoff processes using tracers and GIS analysis in a nested mesoscale catchment. Hydrological Processes. 21(10):1289-1307.
Bown JL, Pachepsky E, Eberst A, Bausenwein U, Millard P, Squire G, Crawford JW.  2007.  Consequences of intraspecific variation for the structure and function of ecological communities. I: Model development and predicted patterns of diversity. Ecological Modelling. 207(2-4):264-276.
Pachepsky E, Bown JL, Eberst A, Bausenwein U, Millard P, Squire G, Crawford JW.  2007.  Consequences of intraspecific variation for the structure and function of ecological communities. II Linking diversity and function. Ecological Modelling. 207(2-4):277-285.
Paoletti, M.G, Osler GHR, Kinnear A, Black DG, Thomson LJ, Tsitsilas A, Sharley D, Judd S, Neville P et al..  2007.  Detritivores as indicators of landscape stress and soil degradation. Australian Journal of Experimental Agriculture. 47(4):412-423.
McAdam JH, Sibbald AR, Teklehaimanot Z, Eason W.  2007.  Developing silvopastoral systems and their effects on diversity of fauna. Agroforestry Systems. 70(1):81-89.
Wright AJ, Soto NA, Baldwin AL, Bateson M, Beale CM, Clark C, Deak T, Edwards EF, Fernandez A, Godinho A et al..  2007.  Do marine mammals experience stress related to anthropogenic noise? International Journal of Comparative Psychology. 20:250-273.
Newey SJ, Willebrand T, Haydon D, Dahl F, Aebischer N, Smith A, Thirgood SJ.  2007.  Do mountain hare populations cycle? Oikos. 116(9):1547-1557.
Devereux G, McNeill G, Newman G, Turner S, Craig L, Martindale S, Helms P, Seaton A.  2007.  Early childhood wheezing symptoms in relation to plasma selenium in pregnant mothers and neonates. Clinical and Experimental Allergy. 37:1000-1008.
Small LA.  2007.  East meets West: Utilising western literature to conceptualise post-Soviet agrarian change. Journal of Peasant Studies. 34(1):29-50.
Singh BK, Tate KR, Kolipaka G, Hedley CB, Macdonald CA, Millard P, Murrell JC.  2007.  Effect of afforestation and reforestation of pastures on the activity and population dynamics of methanotrophic bacteria. Applied and Environmental Microbiology. 73(16):5153-5161.
Millard P, Sommerkorn M, Grelet GA.  2007.  Environmental change and carbon limitation in trees: a biochemical, ecophysiological and ecosystem appraisal. New Phytologist. 175(1):11-28.
Prosser JI, Bohannan BJM, Curtis TP, Ellis RJ, Firestone MK, Freckleton RP, Green JL, Green LE, Killham K, Lennon JJ et al..  2007.  Essay - The role of ecological theory in microbial ecology. Nature Reviews Microbiology. 5(5):384-392.
Veiberg V, Mysterud A, Langvatn R, Loe LE, Irvine RJ, Bonenfant C, Couweleers F, Stenseth N.  2007.  Evidence for a trade-off between early growth and tooth wear in Svalbard reindeer. Journal of Animal Ecology. 76(6):1139-1148.
Perez-Barberia FJ, Schultz S, Dunbar RIM.  2007.  Evidence for coevolution of sociality and relative brain size in three orders of mammals. Evolution. 61(12):2811-2821.
Saari TA, Saari SK, Campbell CD, Alexander IJ, Anderson IC.  2007.  FragMatch - a programme for the analysis of DNA fragment data. Mycorrhiza. 17(2):133-136.
Sims M, Elston DA, Larkham AP, Nussey DH, Albon SD.  2007.  Identifying when weather influences life history traits of grazing herbivores. Journal of Animal Ecology. 76(4):761-770.
Omer RM, Hester AJ, Gordon IJ, Raffique SM, Swaine MD.  2007.  Impact of communication infrastructure development on livestock density and forage use under the transhumance system in northern Pakistan. Outlook on Agriculture. 36(1):21-27.
Singh BK, Munro S, Potts JM, Millard P.  2007.  Influence of grass species and soil type on rhizosphere microbial community structure in grassland soils. Applied Soil Ecology. 36(2-3):147-155.
Freppaz M, Edwards AC, Williams BL, Scalenghe R, Zanini E.  2007.  Labile nitrogen, carbon, and phosphorus pools and nitrogen mineralization and immobilization rates at low temperatures in seasonally snow-covered soils. Biology and Fertility of Soils. 43(5):519-529.
Scott AJ, Shannon PH.  2007.  Local landscape designations in Scotland: Opportunity or barrier to effective landscape management. Landscape and Urban Planning. 81(3):257-269.
Sinclair ARE, Mduma SAR, Hopcraft G, Fryxell J, Hillborn R, Thirgood SJ.  2007.  Long-term ecosystem dynamics in the Serengeti: lessons for conservation. Conservation Biology. 21(3):580-590.
Macdonald CA, Singh BK, Peck JA, van Schaik AP, Hunter LC, Horswell J, Campbell CD, Speir TW.  2007.  Long-term exposure to Zn-spiked sewage sludge alters soil community structure. Soil Biology and Biochemistry. 39(10):2576-2586.
Hyatt M, Gopalakrishnan GS, Bispham J, Gentili S, McMillen IC, Rhind SM, Rae MT, Kyle CE, Brooks AN, Jones C et al..  2007.  Maternal nutrient restriction in early pregnancy programmes hepatic mRNA expression of growth related genes and liver size in adult male sheep. Journal of Endocrinology. 192(1):87-97.
Tate KR, Ross DJ, Saggar S, Hedley CB, Dando J, Singh BK, Lamb SJ.  2007.  Methane uptake in soils from Pinus radiata plantations, a reverting shrubland and adjacent pastures: effects of land-use change, and soil texture, water and mineral nitrogen. Soil Biology and Biochemistry. 39(7):1437-1449.
Aitkenhead MJ, Aitkenhead-Peterson JA, McDowell W, Smart RP, Cresser M.  2007.  Modelling doc export from catchments in Scotland using neural networks. Computers and Geosciences. 33:423-436.
McDonnell JJ, Sivapalan M, Vache K, Dunn S, Grant G, Haggerty R, Hinz C, Hooper R, Kirchner J, Roderick M et al..  2007.  Moving beyond heterogeneity and process complexity: A new vision for watershed hydrology. Water Resources Research. 43(7):W07301.
Soininen J, Lennon JJ, Hillebrand H.  2007.  A multivariate analysis of beta diversity across organisms and environments. Ecology. 88(11):2830-2838.
Scalenghe EERAC, Barberis E.  2007.  Phosphorus loss in overfertilized soils: The selective P partitioning and redistribution between particle size separates. European Journal of Agronomy. 27(1):72-80.
Stutter MI, Lumsdon DG, Thoss V.  2007.  Physico-chemical and biological controls on dissolved organic matter in peat aggregate soil columns. European Journal of Soil Science. 58:646-657.
Scott AJ, Shannon PH.  2007.  Planning for rural development in Scotland: A new role for local landscape designations? Planning Theory and Practice. 8:509-528.
Simonsson M, Andersson S, Andrist-Rangel Y, Hillier S, Mattsson L, Oborn I.  2007.  Potassium release and fixation as a function of fertilizer application rate and soil parent material. Geoderma. 140(1-2):188-198.
Tolkamp BJ, Yearsley JM, Gordon IJ, Illius AW, Speakman JR, Kyriazakis I.  2007.  Predicting the effects of body fatness on food intake and performance of sheep. British Journal of Nutrition. 97(6):1206-1215.
Kay D, Aitken M, Crowther J, Dickson I, Edwards AC, Francis C, Hopkins M, Jeffrey W, Kay C, McDonald MDATD et al..  2007.  Reducing fluxes of faecal indicator compliance parameters to bathing waters from diffuse agricultural sources: The Brighouse Bay study, Scotland. Environmental Pollution. 147(1):138-149.
Szubert J, Reiff C, Thorburn AP, Singh BK.  2007.  REMA: A computer-based mapping tool for analysis of restriction sites in multiple DNA sequences. Journal of Microbiological Methods. 69(2):411-413.
Pedersen ML, Friberg N, Skriver J, Baattrup-Pedersen A, Larsen SE.  2007.  Restoration of Skjern River and its valley: short-term effects on river habitats, macrophytes and macroinvertebrates. Ecological Engineering. 30(2):145-156.
Paterson E, Gebbing T, Abel C, Sim A, Telfer G.  2007.  Rhizodeposition shapes rhizosphere microbial community structure in organic soil. New Phytologist. 173(3):600-610.
Stutter MI, Langan SJ, Demars BOL.  2007.  River sediments provide a link between catchment pressures and ecological status in a mixed land use Scottish river system. Water Research. 41(12):2803-2815.
Matthiopoulos J, Graham K, Smout S, Asseburg C, Redpath S, Thirgood SJ, Hudson P, Harwood J.  2007.  Sensitivity to assumptions in models of generalist predation on a cyclic prey. Ecology. 88(10):2576-2586.
Freppaz M, Williams BL, Edwards AC, Scalenghe R, Zanini E.  2007.  Simulating soil freeze/thaw cycles typical of early and late winter alpine conditions: implications for N and P availability. Applied Soil Ecology. 35(1):247-255.
Slee B.  2007.  Social indicators of multifunctional rural land use: the case of forestry in the UK. Agriculture, Ecosystems and Environment. 120(1):31-40.
Jensen OP, Barbara BJ, Magnuson JJ, Card VM, Futter MN, Soranno PA, Stewart KM.  2007.  Spatial analysis of ice phenology trends across the Laurentian Great Lakes region during a recent warming period. Limnology and Oceanography. 52:2013-2026.
Aitkenhead-Peterson JA, Smart RP, Aitkenhead MJ, Cresser MS, McDowell WH.  2007.  Spatial and temporal variation of dissolved organic carbon export from gauged and ungauged watersheds of Dee Valley, Scotland: Effect of land cover and C:N. Water Resources Research article no. W05442.. 43(5)
Kerlin D, Haydon D, Miller D, Aebischer N, Smith A, Thirgood SJ.  2007.  Spatial synchrony in red grouse population dynamics. Oikos. 116(12):2007-2016.
Small LA.  2007.  Sustainable (rural) livelihoods: a critical review. Canadian Journal of Development Studies. 28:27-38.
Stutter MI, Lumsdon DG, Cooper RJ.  2007.  Temperature and soil moisture effects on dissolved organic matter release from a moorland Podzol O horizon under field and controlled laboratory. European Journal of Soil Science. 58(5):1007-1016.
Osler GHR, Sommerkorn M.  2007.  Towards a complete soil C and N cycle: incorporating the soil fauna. Ecology. 88:1611-1621.
Steffan-Dewenter I, Kessler M, Barkmann J, Bos MM, Buchori D, Erasmi S, Faust H, Gerold G, Glenk K, Gradstein SR et al..  2007.  Tradeoffs between income, biodiversity, and ecosystem functioning during tropical rainforest conversion and agroforestry intensification. Proceedings of the National Academy of Sciences of the United States of America. 104(12):4973-4978.
Howard BJ, Beresford NA, Gashchak S, Arkhipov A, Mayes RW, Caborn J, Stromann G, Wacker L.  2007.  The transfer of 239/240Pu to cow milk. Journal of Environmental Radioactivity. 98(1-2):191-204.
Smith DG, Mayes RW, Hollands T, Cuddeford D, Yule HH, Ladrero CMM, Gillen E.  2007.  Validating the alkane pair technique to estimate dry matter intake in equids. Journal of Agricultural Science. 145:273-281.
Perez-Barberia FJ, Robertson E, Soriguer R, Aldezabal A, Mendizabal M.  2007.  Why polygynous ungulates segregate in space? Testing the activity budget hypothesis in Soay sheep Ecological Monographs. 77(4):631-647.
2006
Hamilton K, Barfoot J, Crawford KE, Simpson CG, Beaumont PC, Bownes M.  2006.  Amplification of chloroplast DNA using the polymerase chain reaction (PCR): a practical activity for secondary school students. Journal of Biological Education. 40:172-177. Abstract
Meharg AA, Deacon C, Edwards KJ, Donaldson M, Davidson DA, Spring C, Scrimgeour CM, Feldmann J, Rabb A.  2006.  Ancient manuring practices pollute arable soils at the St Kilda World Heritage Site, Scottish North Atlantic. Chemosphere. 64:1818-1828. Abstract
Druka A, Muehlbauer G, Druka I, Caldo R, Baumann U, Rostoks N, Schreiber A, Wise R, Close T, Kleinhofs A et al..  2006.  An atlas of gene expression from seed to seed through barley development. Functional & Integrative Genomics. 6:202-211. Abstract
Rostoks N, Schmierer D, Mudie S, Drader T, Brueggeman R, Caldwell DG, Waugh R, Kleinhofs A.  2006.  Barley necrotic locus nec1 encodes the cyclic nucleotide-gated ion channel 4 homologous to the Arabidopsis HLM1. Molecular Genetics and Genomics. 275:159-168. Abstract
Nuopponen M, Wikberg HI, Birch GM, J A-S, Maunu SL, Vuorinen T, Stewart D.  2006.  Characterization of 25 tropical hardwoods with Fourier transform infrared,ultraviolet resonance Raman and 13C cross-polarisation magic-angle spinning NMR spectroscopy. Journal of Applied Polymer Science. 102:810-819. Abstract
Sunley RJ, Atkinson CJ, Jones HG.  2006.  Chill unit models and recent changes in the occurrence of winter chill and spring frost in the United Kingdom. Journal of Horticultural Science & Biotechnology. 81:949-958. Abstract
Kikuchi T, Shibuya H, Aikawa T, Jones JT.  2006.  Cloning and characterization of pectate lyases expressed in the esophageal gland of the pine wood nematode Bursaphelenchus xylophilus. Molecular Plant-Microbe Interactions. 19:280-287. Abstract
Meharg AA, Scrimgeour CM, Hossain SA, Fuller K, Cruickshank K, Williams PN, Kinniburgh DG.  2006.  Codeposition of organic carbon and arsenic in Bengal Delta aquifers. Environmental Science & Technology. 40:4928-4935. Abstract
Hopkins DW, Sparrow AD, Novis P, Gregorich EG, Elberling B, Greenfield LG.  2006.  Controls on the distribution of productivity and organic resources in Antarctic dry valley soils (Review). Proceedings of the Royal Society B. 273:2687-2695. Abstract
Winfield M, D'Amato GF, De Dominicis RI, Salimbeni P, Tucci GF.  2006.  A cytological and molecular study of the genera Scorzonera L. and Podospermum (L.) DC (Asteraceae). Caryologia. 59:153-163. Abstract
Cortet J, Andersen MN, Caul S, Griffiths BS, Joffre R, Lacroix B, Sausse C, Thompson J, Krogh PH.  2006.  Decomposition processes under Bt (Bacillus thuringiensis) maize: results of a multi-site experiment. Soil Biology & Biochemistry. 38:195-199. Abstract
Syed NH, Sorensen AP, Antonise R, van de Wiel C, van der Linden CG, van't Westende W, Hooftman DAP, den Nijs HCM, Flavell AJ.  2006.  A detailed linkage map of lettuce based on SSAP, AFLP and NBS markers. Theoretical and Applied Genetics. 112:517-527. Abstract
Bradshaw JE, Hackett CA, Lowe R, McLean K, Stewart HE, Tierney I, Vilaro MDR, Bryan GJ.  2006.  Detection of a quantitative trait locus for both foliage and tuber resistance to late blight [Phytophthora infestans (Mont.) de Bary] on chromosome 4 of a dihaploid potato clone (Solanum tubersoum subsp. tuberosum). Theoretical and Applied Genetics. 113:943-951. Abstract
Simons V, Morrissey JP, Latijnhouwers M, Csukai M, Cleaver A, Yarrow C, Osborn A.  2006.  Dual effects of plant steroidal alkaloids on Saccharomyces cerevisiae. Antimicrobial Agents and Chemotherapy. 50:2732-2740.
Krivtsov V, Bezginova T, Salmond R, Liddell K, Garside A, Thompson J, Palfreyman JW, Staines HJ, Brendler A, Griffiths BS et al..  2006.  Ecological interactions between fungi, other biota and forest litter composition in a unique Scottish woodland. Forestry. 79:201-216. Abstract
Krivtsov V, Garside A, Bezginova T, Thompson J, Palfreyman JW, Salmond R, Liddell K, Brendler A, Griffiths BS, Watling R et al..  2006.  Ecological study of the forest litter meiofauna of a unique Scottish woodland. Animal Biology. 56:69-93. Abstract
Boag B, Neilson R, Scrimgeour CM.  2006.  The effect of starvation on the planarian Arthurdendyus triangulatus (Tricladida: Terricola) as measured by stable isotopes. Biology and Fertility of Soils. 43:267-270. Abstract
Firbank LG, Rothery P, May MJ, Clark SJ, Scott RJ, R.C. S, Boffey CWH, Brooks DR, Champion GT, Haughton AJ et al..  2006.  Effects of genetically modified herbicide-tolerant cropping systems on weed seedbanks in two years of following crops. Biology Letters. 2:140-143. Abstract
Shepherd T, Griffiths DW.  2006.  The effects of stress on plant epicuticular waxes. New Phytologist. 171:469-499. Abstract
Heard MS, Clark SJ, Rothery P, Perry JN, Bohan DA, Brooks DR, Champion GT, Dewar AM, Hawes C, Haughton AJ et al..  2006.  Effects of successive seasons of genetically modified herbicide-tolerant maize cropping on weeds and invertebrates. Annals of Applied Biology. 149:249-254. Abstract
Nuopponen M, Birch GM, Sykes R, Lee S, Stewart D.  2006.  Estimation of wood density and chemical composition by means of Diffuse Reflectance Mid-Infrared Fourier Transform (DRIFT-MIR) spectroscopy. Journal of Agricultural and Food Chemistry. 54:34-40. Abstract
Muehlbauer GJ, Bhau BS, Syed NH, Heinen S, Cho S, Marshall DF, Pateyron S, Buisine N, Chalhoub B, Flavell AJ.  2006.  A hAT superfamily tranposase recruited by the cereal grass genome. Molecular Genetics and Genomics. 275:553-563. Abstract
Nuopponen M, Shepherd T, Birch GM, Verrall SR, Stewart D.  2006.  Hemicelluloses and pectins in 25 tropical hardwoods. Cellulose Chemistry and Technology. 40:735-738. Abstract
Kevekordes K, Holland D, H N, Jenkins S, Kos R, Roberts S, Raven JA, Scrimgeour CM, Shelly K, Stojkovic S et al..  2006.  Inorganic carbon acquisition by eight species of Caulerpa (Caulerpaceae, Chlorophyta). Phycologia. 45:442-449. Abstract
Dekker LW, Hallett PD, Lichner L, Novak V, Sir M.  2006.  Introduction to biohydrology. BiologiaBiohydrology, Special Issue, Biologia 61/Supplement 19. 61, Suppl 19:223-224. Abstract
Castelli L, Bryan GJ, Blok VC, Ramsay G, Sobczak M, Gillespie T, Phillips MS.  2006.  Investigations of Globodera pallida invasion and syncytia formation within roots of the susceptible potato cultivar D. Nematology. 8:103-110. Abstract
Finkel ZV, Quigg A, Raven JA, Reinfelder JR, Schofield OE, Falkowski PG.  2006.  Irradiance and the elemental stoichiometry of marine phytoplankton. Limnology and Oceanography. 51:2690-2701. Abstract
Graham J, Smith K, Tierney I, MacKenzie K, Hackett CA.  2006.  Mapping gene H controlling cane pubescence in raspberry and its association with resistance to cane botyritis and spur blight, rust and cane spot. Theoretical and Applied Genetics. 112:818-831. Abstract
Bradshaw JE, Bryan GJ, Lees AK, McLean K, Solomon-Blackburn RM.  2006.  Mapping the R10 and R11 genes for resistance to late blight (Phytophthora infestans) present in the potato (Solanum tuberosum) R-gene differentials of Black. Theoretical and Applied Genetics. 112:744-751. Abstract
Begg GS, Hockaday S, McNicol JW, Askew M, Squire GR.  2006.  Modelling the persistence of volunteer oilseed rape (Brassica napus). Ecological Modelling. 198:195-207. Abstract
Tuomainen MH, Nunan N, Lehesranta SJ, Tervahauta AI, Hassinen VH, Schat H, Koistinen KM, Auriola S, McNicol JW, Karenlampi SO.  2006.  Multivariate analysis of protein profiles of metal hyperaccumulator Thlaspi caerulescens accessions. Proteomics. 6:3696-3706. Abstract
Lees AK, Wattier R, Shaw DS, Sullivan L, Williams NA, Cooke DEL.  2006.  Novel microsatellite markers for the analysis of Phytophthora infestans populations. Plant Pathology. 55:311-319. Abstract
McCue KF, Allen PV, Shepherd LVT, Blake A, Whitworth JL, Maccree MM, Rockhold DR, Stewart D, Davies HV, Belknap WR.  2006.  The primary in vivo steroidal alkaloid glucosyltransferase from potato. Phytochemistry. 67:1590-1597. Abstract
Lehesranta SJ, Davies HV, Shepherd LVT, Koistinen KM, Massat N, Nunan N, McNicol JW, K SO.  2006.  Proteomic analysis of the potato tuber life cycle. Proteomics. 6:6042-6052. Abstract
Rostoks N, Ramsay L, MacKenzie K, Cardle L, Bhat PR, Roose ML, Svensson JT, Stein N, Varshney RK, Marshall DF et al..  2006.  Recent history of artificial outcrossing facilitates whole-genome association mapping in elite inbred crop varieties. Proceedings of the National Academy of Sciences, USA. 103:18656-18661. Abstract
Andrews M, Raven JA, Lea PJ, Sprent JI.  2006.  A role for shoot protein in shoot-root dry matter allocation in higher plants. Annals of Botany. 97:3-10. Abstract
Nunan N, Singh B, Reid E, Ord B, Papert A, Squires J, Prosser JI, Wheatley RE, McNicol JW, Millard P.  2006.  Sheep-urine-induced changes in soil microbial community structure. FEMS Microbiology Ecology. 56:310-320. Abstract
Hassall M, Adl S, Berg M, Griffiths BS, Scheu S.  2006.  Soil fauna-microbe interactions: towards a conceptual framework for research. European Journal of Soil Biology. 42:S54-S60. Abstract
Griffiths BS, Caul S, Thompson J, Birch ANE, Scrimgeour CM, Cortet J, Foggo A, Hackett CA, Krogh PH.  2006.  Soil microbial and faunal community responses to Bt maize and insecticide in two soils. Journal of Environmental Quality. 35:734-741. Abstract
Gregorich EG, Rochette P, Hopkins DW, McKim UF, St-Georges P.  2006.  Tillage-induced environmental conditions in soil and substrate limitation determine biogenic gas production. Soil Biology & Biochemistry. 38:2614-2628. Abstract
Canto T, Uhrig JF, Swanson MM, Wright KM, MacFarlane SA.  2006.  Translocation of the Tomato bushy stunt virus P19 protein into the nucleus by ALY proteins compromises its silencing suppressor activity. Journal of Virology. 80:9064-9072. Abstract
Swanston JS, Newton AC, Hoad SP, Spoor W.  2006.  Variation across environments in patterns of water uptake and endosperm modification in barley varieties and variety mixtures. Journal of the Science of Food and Agriculture. 86:826-833. Abstract
Cacciola SO, Spica D, Cooke DEL, Raudino F, San Lio GMD.  2006.  Wilt and collapse of Cuphea ignea caused by Phytophthora tropicalis in Italy. Plant Disease. 90:680-680. Abstract
Saison C, Degrange V, Oliver R, Millard P, Commeaux C, Montange D, LeRoux X.  2006.  Alteration and resilience of the soil microbial community following compost amendment: effects of compost level and compost-borne microbial community. Environmental Microbiology. 8(2):247-257.
Matthews KB, Wright IA, Buchan K, Davies DA, Schwarz G.  2006.  Assessing the options for upland livestock systems under CAP reform: developing and applying a livestock systems model within whole-farm systems analysis. Agricultural Systems. 90(1-3):32-61.
Singh BK, Walker A, Wright DJ.  2006.  Bioremedial potential of fenamiphos and chlorpyrifos degrading isolates: influence of different environmental conditions. Soil Biology and Biochemistry. 38(9):2682-2693.
Hutchins M, Urama K, Penning E, Icke J, Dilks C, Bakken T, Perrin C, Saloranta T, Candela L.  2006.  The BMW model evaluation tool: a guidance document. Archiv fur Hydrologie: Large Rivers Supplement. 17:23-48.
Beale CM, Burfield IJ, Sim IMW, Rebecca GW, Pearce-Higgins JW, Grant MC.  2006.  Climate change may account for the decline in British ring ouzels Turdus torquatus. Journal of Animal Ecology. 75(3):826-835.
Midwood AJ, Gebbing T, Wendler R, Sommerkorn M, Hunt J, Millard P.  2006.  Collection and storage of CO2 for 13C analysis: an application to separate soil CO2 efflux into root and soil derived components. Rapid Communications in Mass Spectrometry. 20(22):3379-3384.
Matthews KB, Buchan K, Sibbald AR, Craw S.  2006.  Combining deliberative and computer-based methods for multi-objective land-use planning. Agricultural Systems. 87(1):18-37.
Hayati D, Slee W.  2006.  Combining qualitative and quantitative methods in the measurement of rural poverty: The case of Iran. Social Indicators Research. 75(3):361-394.
Ayres E, van der Wal R, Sommerkorn M, Bardgett R.  2006.  Direct uptake of soil nitrogen by mosses. Biology Letters. 2(2):286-288.
Rosen K, Shand CA, Haak E, Cheshire MV.  2006.  Effect of clay content and wetting and drying on radiocaesium behaviour in a peat and peaty podzol. The Science of the Total Environment. 368(2-3):795-803.
Gardner DS, Van Bon BWN, Dandrea J, Goddard PJ, May SF, Wilson V, Stephenson T, Symonds ME.  2006.  Effect of periconceptual undernutrition and gender on hypothalamic-pituitary-adrenal axis function in young adult sheep. Journal of Endocrinology. 190(2):203-212.
Shand CA, Coutts G.  2006.  The effects of sheep faeces on soil solution composition. Plant and Soil. 285(1-2):135-148.
Harmel RD, Cooper RJ, Slade RM, Green CH, Haney RL, Arnold JG.  2006.  Error propagation in measured streamflow and water quality data for small rural watersheds. Transactions of the American Society of Agricultural Engineers. 49:689-701.
Shafi S, Sweetman A, Hough RL, Smith R, Rosevear A, Pollard SJT.  2006.  Evaluating fugacity models for trace components in landfill gas. Environmental Pollution. 144:1013-1023.
Heywood E, Wright J, Wienburg CL, Black HIJ, Long SM, Osborn D, Spurgeon DJ.  2006.  Factors influencing the national distribution of polycyclic aromatic hydrocarbons and polychlorinated iphenyls in British soils. Environmental Science and Technology. 40(24):7629-7635.
Johnston S, Grune T, Bell L, Murray S, Souter D, Erwin S, Yearsley J, Gordon I, Illius A, Kyriazakis I et al..  2006.  Having it all - historical energy intakes do not generate the anticipated trade-offs in fecundity. Proceedings of the Royal Society of London, B. 273(1592):1369-1374.
Mansfield L, Burton R, Schwarz G, Brown K, Convery I.  2006.  The heft: a multifunctional management tool. The International Journal of Biodiversity Science and Management. 2:238-241.
Sutherland WJ, Armstrong-Brown S, Armsworth PR, Brereton T, Brickland J, Campbell CD, Chamberlain DE, Cooke AI, Dulvy NK, Dusic NR et al..  2006.  The identification of 100 ecological questions of high policy relevance in the UK. Journal of Applied Ecology. 43(4):617-627.
Horswell J, Weitz HJ, Percival HJ, Speir TW.  2006.  Impact of heavy metal amended sewage sludge on forest soils as assessed by bacterial and fungal biosensors. Biology and Fertility of Soils. 42(6):569-576.
Stutter MI, Deeks LK, Low D, Billett MF.  2006.  Impact of soil and groundwater heterogeneity on surface water chemistry of an upland catchment. Journal of Hydrology. 318(1-4):103-120.
McNamara NP, Chamerlain PM, Pierce TG, Sleep D, Black HIJ, Reay DS, Ineson P.  2006.  Impact of water table depth on forest soil methane turnover in laboratory soil cores deduced from natural abundance and tracer 13C stable isotope experiments. Isotopes in Environmental and Health Studies. 42(4):379-390.
Rivington M, Matthews KB, Bellocchi G, Buchan K, Stockle CO, Donatelli M.  2006.  An integrated assessment approach to conduct analyses of climate change impacts on whole-farm systems. Environmental Modelling Software. 22(2):202-210.
Moir HJ, Gibbins CN, Soulsby C, Webb JH.  2006.  Interactions between stream discharge and hydraulic conditions in contrasting channel morphologies and their influence on site utilisation by spawning Atlantic salmon (Salmo salar). Canadian Journal of Fisheries and Aquatic Sciences. 63(11):2567-2585.
Singh BK, Munro S, Reid E, Ord B, Potts JM, Paterson E, Millard P.  2006.  Investigating microbial community structure in soils by physiological, biochemical and molecular fingerprinting methods. European Journal of Soil Science. 57:72-82.
Matthews R, Selman P.  2006.  Landscape as a focus for integrating human and environmental processes. Journal of Agricultural Economics. 57(2):199-212.
Sherlock KL, Innes A, Cox S, Smith A, Mason A.  2006.  Living with dementia in rural and remote Scotland: Diverse experiences of people with dementia and their carers. Journal of Rural Studies. 22:161-176.
Hester AJ, Scogings PF, Trollope WSW.  2006.  Long-term impacts of goat browsing on bush-clump dynamics in a semi-arid subtropical savanna. Plant Ecology. 183(2):277-290.
Singh BK, Walker A.  2006.  Microbial degradation of organophosphorus compounds. FEMS Microbiology Review. 30(3):428-471.
Karpouzas DG, Singh BK.  2006.  Microbial degradation of organophosphorus xenobiotics: metabolic pathways and molecular basis. Advances in Microbial Physiology. 51:119-185.
Andrist-Rangel Y, Simonsson M, Andersson S, Oborn I, Hillier S.  2006.  Mineralogical budgeting of potassium in soil: a basis for understanding standard measures of reserve potassium. Journal of Plant Nutrition and Soil Science. 169:605-615.
Milner-Gulland EJ, Kerven C, Behnke R, Wright IA, Smailov A.  2006.  A multi-agent system model of pastoralist behaviour in Kazakhstan. Ecological Complexity. 3(1):23-36.
Singh BK, Thomas N.  2006.  Multiplex-terminal restriction fragment length polymorphism (M-TRFLP). Nature Protocols. 1(5):2428-2433.
Goddard PJ, Waterhouse A, Dwyer CM, Stott A.  2006.  The perception of the welfare of sheep in extensive systems. Small Ruminant Research. 62(3):215-225.
Paterson E, Sim A, Standing D, Dorward M, McDonald AJS.  2006.  Root exudation from Hordeum vulgare in response to localised nitrate supply. Journal of Experimental Botany. 57(10):2413-2420.
Soulsby C, Tetzlaff D, Rodgers P, Dunn S, Waldron S.  2006.  Runoff processes, stream water residence times and controlling landscape characteristics in a mesoscale catchment: an initial evaluation. Journal of Hydrology. 325(1-4):197-221.
Soulsby C, Tetzlaff D, Dunn SM, Waldron S.  2006.  Scaling up and out in runoff process understanding - insights from nested experimental catchment studies. Hydrological Processes - HP Today. 20:2461-2465.
Gimona A, Birnie RVB, Sibbald AR.  2006.  Scaling up of a mechanistic dynamic model in a GIS environment to assess temperate grassland production at the regional scale. Grass and Forage Science. 61(3):315-331.
Omer RM, Hester AJ, Gordon IJ, Swaine MD, Raffique SM.  2006.  Seasonal changes in pasture biomass, production and offtake under the transhumance system in northern Pakistan. Journal of Arid Environments. 67(4):641-660.
Nunan N, Singh B, Reid E, Ord B, Papert A, Squires J, Prosser J, Wheateley R, McNicol J, Millard P.  2006.  Sheep urine deposition is a source of heterogeneity in upland grassland soil microbial community structure. FEMS Microbiology Ecology. 56(2):310-320.
Guggenheim S, Adams JM, Bain DC, Bergaya F, Brigatti MF, Drits VA, Eberl DD, Formoso MLL, Galan E, Kogure T et al..  2006.  Summary of recommendations of nomenclature committees relevant to clay mineralogy: report of the Association Internationale pour l'Etude des Argiles (AIPEA) Nomenclature Committee for 2006. Clays and Clay Minerals. 54(6):761-772.
Sibbald AM, Erhard HW, Hooper RJ, Dumont B, Boissy A.  2006.  A test for measuring individual variation in how far grazing animals will move away from a social group to feed. Applied Animal Behaviour Science. 98:89-99.
Loe LE, Irvine RJ, Bonenfant C, Stien A, Langvatn R, Albon SD, Mysterud A, Stenseth NC.  2006.  Testing five hypotheses of sexual segregation in an arctic ungulate. Journal of Animal Ecology. 75(2):485-496.
Yearsley JM, Villalba J, Kyriazakis I, Speakman JR, Tolkamp BJ, Illius AW, Gordon IJ, Duncan AJ.  2006.  A theory of associating food types with their post-ingestive consequences. American Naturalist. 167(5):705-716.
Usher MB, Sier ARJ, Hornung M, Millard P.  2006.  Understanding biological diversity in soil: the UK's Soil Biodiversity Research Programme. Applied Soil Ecology. 33(2):101-113.
Singh BK, Nazaries L, Munro S, Anderson IC, Campbell CD.  2006.  Use of multiplex terminal restriction fragment length polymorphism for rapid and simultaneous analysis of different components of the soil microbial community. Applied and Environmental Microbiology. 72(11):7278-7285.
2005
Pendle AF, Clark GP, Boon R, Lewandowska D, Lam YW, Andersen J, Mann M, Lamond AI, Brown JWS, Shaw PJ.  2005.  Proteomic analysis of the Arabidopsis nucleolus suggests novel nucleolar functions. Molecular Biology of the Cell. 16:260-269.
Norra S, Handley LL, Berner Z, St D.  2005.  13C and 15N natural abundances of urban soils and herbaceous vegetation in Karlsruhe, Germany. European Journal of Soil Science. 56:607-620. Abstract

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The James Hutton Research Institute is the result of the merger in April 2011 of MLURI and SCRI. This merger formed a new powerhouse for research into food, land use, and climate change.