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Shin KH, Yang SH, Lee JY, Lim CW, Lee SC, Brown JWS, Kim SH.  2015.  Alternative splicing of mini-exons in the Arabidopsis leaf rust receptor-like kinase LRK10 genes affects subcellular localisation. Plant Cell Reports. 34:495-505.
James A, Syed NH, Bordage S, Marshall J, Nimmo GA, Jenkins GI, Herzyk P, Brown JWS, Nimmo HG.  2012.  Alternative splicing mediates responses of the Arabidopsis thaliana circadian clock to temperature changes. The Plant Cell. 24:961-981.
Syed NH, Kalyna M, Marquez Y, Barta A, Brown JWS.  2012.  Alternative splicing in plants - coming of age. Trends in Plant Science. 17:616-623.
Simpson CG, Lewandowska D, Fuller J, Maronova M, Kalyna M, Davidson D, McNicol JW, Raczynska D, Jarmolowski A, Barta A et al..  2008.  Alternative splicing in plants. Biochemical Society Transactions. 36:508-510.
Staiger D, Brown JWS.  2013.  Alternative splicing at the intersection of biological timing, development, and stress responses. The Plant cell. 25:3640-3656.
Kalyna M, Simpson CG, Syed NH, Lewandowska D, Marquez Y, Kusenda B, Marshall J, Fuller J, Cardle L, McNicol JW et al..  2012.  Alternative splicing and nonsense-mediated decay modulate expression of important regulatory genes in Arabidopsis. Nucleic Acids Research. 40:2454-2469.
Paterson E, Neilson R, Midwood AJ, Osborne SM, Sim A, Thornton B, Millard P.  2011.  Altered food web structure and C-flux pathways associated with mineralisation of organic amendments to agricultural soil. Applied Soil Ecology. 48:107-116.
Kr E, Tups A, Archer ZA, Ross AW, Moar KM, Bell LM, Duncan JS, Mayer CD, Morgan PJ, Mercer JG et al..  2007.  Altered expression of SOCS3 in the hypothalamic arcuate nucleus during seasonal body mass changes in the field vole, Microtus agrestis. Journal of Neuroendocrinology. 19:83-94. Abstract
Bahar B, Monahan FJ, Moloney AP, O'Kiely P, Scrimgeour CM, Schmidt O.  2005.  Alteration of the carbon and nitrogen stable isotope composition of beef by substitution of grass silage with maize silage. Rapid Communications in Mass Spectrometry. 19:1937-1942. Abstract
Saison C, Degrange V, Oliver R, Millard P, Commeaux C, Montange D, LeRoux X.  2006.  Alteration and resilience of the soil microbial community following compost amendment: effects of compost level and compost-borne microbial community. Environmental Microbiology. 8(2):247-257.
Butterfield BJ, Cavieres LA, Callaway RM, Cook BJ, Kikvidze Z, Lortie CJ, Michalet R, Pugnaire FI, Schoeb C, Xiao S et al..  2013.  Alpine cushion plants inhibit the loss of phylogenetic diversity in severe environments. Ecology Letters. 16:478-486.
Gautrais J, Michelena P, Sibbald A, Deneubourg JL.  2007.  Allelomimetic synchronisation in merino sheep. Animal Behaviour. 74(5):1443-1454.
Henderson IR, Liu F, Drea SO, Simpson GG, Dean C.  2005.  An allelic series reveals essential roles for FY in plant development in addition to flowering-time control. Development. 132:3597-3607. Abstract
Spies A, Korzun V, Bayles R, Rajaraman J, Hedley PE, Schweizer P.  2011.  Allele mining in barley genetic resources reveals genes of race-nonspecific powdery mildew resistance. Frontiers in Plant Science: Plant Nutrition. 2:e113.
Spies A, Korzun V, Bayles R, Rajaraman J, Himmelback A, Hedley PE, Schweizer P.  2012.  Allele mining in barley genetic resources reveals genes of race-non-specific powdery mildew resistance. Frontiers in Plant Science. 2:113.
Speck JJ, James EK, Sugawara M, Sadowsky MJ, Gyaneshwar P.  2019.  An alkane sulfonate monooxygenase is required for symbiotic nitrogen fixation by Bradyrhizobium diazefficiens (syn. Bradyrhizobium japonicum) USDA110(T). Applied and Environmental Microbiology. 85:ArticleNo.e01552-19.
Schlesinger D, Rikanati RD, Volis S, Faigenboim A, Vendramin V, Cattonaro F, Hooper M, Oren E, Taylor M, Sitrit Y et al..  2019.  Alkaloid chemodiversity in Mandragora spp. is associated with loss-of-functionality of MoH6H, a hyoscyamine 6 beta-hydroxylase gene. Plant Science. 283:301-310.
Brodie J, Chan CX, De Clerck O, Cock JM, Coelho SM, Gachon C, Grossman AR, Mock T, Raven JA, Smith AG et al..  2017.  The algal revolution. Trends in Plant Science. 22:726-738.
Wells ML, Potin P, Craigie JS, Raven JA, Merchant SS, Helliwell KE, Smith AG, Camire ME, Brawley SH.  2017.  Algae as nutritional and functional food sources: revisiting our understanding. Journal of Applied Phycology. 29:949-982.
Jia Y, Burbidge C, Sweetman C, Schultz E, Soole E, Jenkins C, Hancock RD, Bruning JB, Ford CM.  2019.  An aldo-keto reductase with 2-keto-l-gulonate reductase activity functions in l-tartaric acid biosynthesis from vitamin C in Vitis vinifera. Journal of Biological Chemistry. 294:15932-15946.
Jouet A, Saunders DGO, McMullan M, Ward B, Furzer O, Jupe F, Cevik V, Hein I, Thilliez GJA, Holub E et al..  In Press.  Albugo candida race diversity, ploidy and host-associated microbes revealed using DNA sequence capture on diseased plants in the field. New Phytologist. Published online..
Jouet A, Saunders DGO, McMullan M, Ward B, Furzer O, Jupe F, Cevik V, Hein I, Thilliez GJA, Holub E et al..  2019.  Albugo candida race diversity, ploidy and host-associated microbes revealed using DNA sequence capture on diseased plants in the field. New Phytologist. 221:1529-1543.
Chappell A, Scott KP, Griffiths IA, Cowan AA, Hawes C, Wishart J, Martin P.  2017.  The agronomic performance and nutritional content of oat and barley varieties grown in a northern maritime environment depends on variety and growing conditions. Journal of Cereal Science. 74:1-10.
Silva VM, Boleta EHM, Martins JT, dos Santos FLM, da Rocha Silva AC, Alcock TD, Wilson L, de Sá ME, Young SD, Broadley MR et al..  2019.  Agronomic biofortification of cowpea with selenium: effects of selenate and selenite application on selenium and phytate concentrations in seeds. Journal of the Science of Food and Agriculture. 99:5969-5983.
Hawes C, Iannetta PPM, Squire GR.  2021.  Agroecological practices for whole system sustainability. CABI Review, 16..
Subedi M, Hocking TJ, Fullen MA, McCrea AR, Milne E.  2010.  Agro-environmental project duration and effectiveness in South-East Asia. Outlook on Agriculture. 39(2):107-113.
Lamie RD, Chase L, Chiodo E, Dickes FLS, Schmidt C, Streifeneder T.  2021.  Agritourism around the globe: Definitions, authenticity, and potential controversy. Journal of Agriculture, Food Systems, and Community Development, 10..
Sutherland LA.  2019.  Agriculture and inequalities: Gentrification in a Scottish parish. Journal of Rural Studies. 68:240-250.
Andersen MN, Sausse C, Lacroix B, Caul S, Mess A.  2007.  Agricultural studies of GM maize and the field experimental infrastructure of ECOGEN. Pedobiologia. 51:175-184. Abstract
Sutherland LA, Toma L, Barnes AP, Matthews KB, Hopkins J.  2016.  Agri-environmental diversification:linking environmental, forestry and renewable energy engagement on Scottish farms. Journal of Rural Studies. 47:10-20.
Marion G, Smith LA, Swain DL, Davidson RS, Hutchings MR.  2008.  Agent-based modelling of foraging behaviour: the impact of spatial heterogeneity on disease risks from faeces in grazing systems. Journal of Agricultural Science. 146:507-520. Abstract
Brown C, Bakam I, Smith P, Matthews RB.  2016.  An agent-based modelling approach to evaluate factors influencing bioenergy crop adoption in north-east Scotland. Global Change Biology Bioenergy. 8:226-244.
Scalco A, Macdiarmid JI, Craig T, Whybrow S, Horgan GW.  2019.  An agent-based model to simulate meat consumption behaviour of consumers in Britain. Journal of Artificial Societies and Social Simulation. 22:ArticleNo.8.
Neill AJ, Tetzlaff D, Strachan NJC, Hough RL, Avery LM, Kuppel S, Maneta MP, Soulsby C.  2020.  An agent-based model that simulates the spatio-temporal dynamics of sources and transfer mechanisms contributing faecal indictor organisms to streams. Part 1: Background and model description. Journal of Environmental Management. 270:ArticleNo.110903.
Sanchez-Marono N, Alonso-Betanzos A, Fontenla-Romero O, Brinquis-Nunez C, Polhill JG, Craig T, Dumitru A, Garcia-Mira R.  2015.  An agent-based model for simulating environmental behavior in an educational organization. Neural Processing Letters. 42:89-118.
Hartley IP, Garnett MH, Sommerkorn M, Hopkins DW, Wookey PA.  2013.  The age of CO2 released from soils in contrasting ecosystems during the arctic winter. Soil Biology and Biochemistry. 63:1-4.
Sprent JI, Odee DW, Dakora FD.  2010.  African legumes: A vital but under-utilised resource. Journal of Experimental Botany. 61:1257-1265.
Sun XL, Gilroy EM, Chini A, Nurmberg PL, Hein I, Lacomme C, Birch PRJ, Hussain A, Yun BW, Loake GJ.  2011.  ADS1 encodes a MATE-transporter that negatively regulates plant disease resistance. New Phytologist. 192:471-482.
Merante P, Dibari C, Ferrise R, Sanchez B, Iglesias A, Lesschen J, Kuikman P, Yeluripati J, Smith P, Bindi M.  2017.  Adopting soil organic carbon management practices in soils of varying quality: implications and perspectives in Europe. Soil and Tillage Research. 165:95-106.
Sarkki S, Tinch R, Niemelä J, Heink U, Waylen KA, Timaeus J, Young JC, Watt AD, Neßhöver C, Van Den Hove S.  2015.  Adding ‘iterativity’ to the credibility, relevance, legitimacy: A novel scheme to highlight dynamic aspects of science-policy interfaces. Environmental Science and Policy. 54:505-512.
Cammarano D, Payero J, Basso B, Stefanova L, Grace P.  2012.  Adapting wheat sowing dates to projected climate change in the Australian sub-tropics: analysis of crop water use and yield. Crop and Pasture Science.
Ruiz-Ramos M, Ferrise R, Rodriguez A, Lorite IJ, Bindi M, Carter TR, Fronzek S, Palosuo T, Pirttioja N, Baranowski P et al..  2017.  Adaptation response surfaces for managing wheat under perturbed climate and CO2 in a Mediterranean environment. Agricultural Systems. Published online..
Ruiz-Ramos M, Ferrise R, Rodriguez A, Lorite IJ, Bindi M, Carter TR, Fronzek S, Palosuo T, Pirttioja N, Baranowski P et al..  2018.  Adaptation response surfaces for managing wheat under perturbed climate and CO2 in a Mediterranean environment. Agricultural Systems. 159:260-274.
Ceola S, Montanari A, Krueger T, Dyer F, Kreibich H, Westerberg I, Carr G, Cudennec C, Elshorbagy A, Savenije H et al..  2016.  Adaptation of water resources systems to changing society and environment: a statement by the International Association of Hydrological Sciences. Hydrological Sciences Journal. 61:2803-2817.
Santos PM, Thornton B, Corsi M.  2012.  Adaptation of the C-4 grass panicum maximum to defoliation is related to plasticity of N uptake, mobilisation and allocation patterns. Scientia Agricola. 69:293-299.
Langkilde S, Schroder M, Stewart D, Meyer O, Conner S, Davies HV, Poulsen M.  2008.  Acute toxicity of high doses of the glycoalkaloids, . Journal of Agricultural and Food Chemistry. 56:8753-8760. Abstract
Loe LE, Bonenfant C, Mysterud A, Severinsen T, Oritsland N, Langvatn R, Stien A, Irvine RJ, Stenseth N.  2007.  Activity pattern of arctic reindeer in a predator-free environment - no need to keep a daily rhythm. Oecologia. 152(4):617-624.
Hopkins M, Duarte C, Beaulieu K, Finlayson G, Gibbons C, Johnstone AM, Whybrow S, Horgan GW, Blundell JE, Stubbs RJ.  2019.  Activity energy expenditure is an independent predictor of energy intake in humans. International Journal of Obesity. 43:1466-1474.
Geberts J, Singh BK, Pan Y, Bodrossy L.  2009.  Activity and structure of methanotrophic communities in landfill cover soils. Environmental Microbiology and Environmental Microbiology Reports. 1:414-423.
Andrist-Rangel Y, Simonsson M, Oborn I, Hillier S.  2013.  Acid-extractable potassium in agricultural soils: Source minerals according by differential and quantitative x-ray diffraction. Journal of Plant Nutrition and Soil Science. 176:407-419.
Navajas EA, Lambe NR, McLean KA, Glasbey CA, Fisher AV, Charteris AJL, B L, Simm G.  2007.  Accuracy of in vivo muscularity indices measured by computed tomography and their associaton with carcass quality in lambs. Meat Science. 75:533-542. Abstract
Doll S, Kuhlmann M, Rutten T, Mette MF, Scharfenberg S, Petridis A, Berreth DC, Mock HP.  2018.  Accumulation of the coumarin scopolin under abiotic stress conditions is mediated by the Arabidopsis thaliana THO/TREX complex. Plant Journal. 93:431-444.
George TS, Simpson RJ, Hadobas PA, Marshall DJ, Richardson AE.  2007.  Accumulation and phosphatase-lability of organic phosphorus in fertilised pasture soils. Australian Journal of Agricultural Research. 58:47-55. Abstract
Sutherland C, Elston DA, Lambin X.  2013.  Accounting for false positive detection error induced by transient individuals. Wildlife Research. 40:490-498.
Flynn KJ, St John M, Raven JA, Skibinski DOF, Allen JI, Mitra A, Hofmann EE.  2015.  Acclimation, adaptation, traits and trade-offs in plankton functional type models: reconciling terminology for biology and modelling. Journal of Plankton Research. 37:683-691.
Somorin YM, Vollmerhausen T, Waters N, Pritchard L, Abram F, Brennan F, O'Byrne C.  2018.  Absence of Curli in soil-persistent Escherichia coli is mediated by a C-di-GMP signaling defect and suggests evidence of biofilm-independent niche specialization. Frontiers in Microbiology. 9:ArticleNo.1340.
Kim S-H, Koroleva OA, Lewandowska D, Pendle AF, Clark GP, Simpson CG, Shaw PJ, Brown JWS.  2009.  Aberrant mRNA transcripts and the nonsense-mediated decay proteins UPF2 and UPF3 are enriched in the Arabidopsis nucleolus. Plant Cell. 21:2045-2057.
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Guo W, Tzioutziou NA, Stephen G, Milne I, Calixto CPG, Waugh R, Brown JWS, Zhang R.  2021.  3D RNA-seq: a powerful and flexible tool for rapid and accurate differential expression and alternative splicing analysis of RNA-seq data for biologists. RNA Biology.Published online..
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Roulston C, Luke GA, de Felipe P, Ruan L, Cope J, Nicholson J, Sukhodub A, Tilsner J, Ryan MD.  2016.  "2A-Like' signal sequences mediating translational recoding: a novel form of dual protein targeting. Traffic. 17:923-939.
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Song BK, Hein I, Druka A, Waugh R, Marshall DF, Nadarajah K, Yap SJ, Ratnam W.  2009.  The 172 kb genomic DNA region of the O. rufipogon ylg1.1 locus: comparative sequence analysis with O. sativa ssp. japonica and O. sativa ssp. indica. Functional & Integrative Genomics. 9:97-108.
Norra S, Handley LL, Berner Z, St D.  2005.  13C and 15N natural abundances of urban soils and herbaceous vegetation in Karlsruhe, Germany. European Journal of Soil Science. 56:607-620. Abstract
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Macedo D, Tavares L, McDougall GJ, Miranda HV, Stewart D, Ferreira RB, Tenreiro S, Outeiro TF, Santos CN.  2015.  (Poly)phenols protect from alpha-synuclein toxicity by reducing oxidative stress and promoting autophagy. Human Molecular Genetics. 24:1717-1732.
Macedo D, Jardim C, Figueira I, Almeida AF, McDougall GJ, Stewart D, Yuste JE, Tomás-Barberán FA, Tenreiro S, Outeiro TF et al..  2018.  (Poly)phenol-digested metabolites modulate alpha-synuclein toxicity by regulating proteostasis. Scientific Reports. 8:ArticleNo.6965..
Jardim C, Macedo D, Figueira I, Dobson G, McDougall GJ, Stewart D, Ferreira RB, Menezes R, Santos CN.  2017.  (Poly)phenol metabolites from Arbutus unedo leaves protect yeast from oxidative injury by activation of antioxidant and protein clearance pathways. Journal of Functional Foods. 32:333-346.
Fischer A, Kerezi V, Arroyo B, Mateos-Delibes M, Tadie D, Lowassa A, Skogen K, Figari H.  2013.  (De-) legitimising hunting - discourses over the morality of hunting in Europe and Eastern Africa. Land Use Policy. 32:261-270.
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Sutherland LA, Gabriel D, Hathaway-Jenkins L, Pascual U, Schmutz U, Rigby D, Godwin R, Sait S, Sakrabani R, Kunin B et al..  2012.  The 'neighbourhood effect': a multidisciplinary assessment of the case for farmer co-ordination in agri-environmental programmes. Land Use Policy. 29:502-512.
Evans MJ, Batson WG, Gordon IJ, Belton E, Chaseling T, Fletcher D, Harrison M, McElroy T, Mungoven A, Newport J et al..  2021.  The 'Goldilocks Zone' of predation: the level of fox control needed to select predator resistance in a reintroduced mammal in Australia. Biodiversity and Conservation. Published online..

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The James Hutton Research Institute is the result of the merger in April 2011 of MLURI and SCRI. This merger formed a new powerhouse for research into food, land use, and climate change.